View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8923_low_36 (Length: 241)
Name: NF8923_low_36
Description: NF8923
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8923_low_36 |
 | |
|
| [»] scaffold0127 (1 HSPs) |
| | |
|
| [»] scaffold0884 (1 HSPs) |
| | |
|
| [»] scaffold0026 (1 HSPs) |
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| [»] scaffold0445 (1 HSPs) |
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| [»] scaffold0219 (1 HSPs) |
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| [»] scaffold0017 (1 HSPs) |
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| [»] scaffold0088 (1 HSPs) |
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| [»] scaffold0262 (1 HSPs) |
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| [»] scaffold0064 (1 HSPs) |
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| [»] scaffold0009 (1 HSPs) |
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| [»] scaffold0603 (1 HSPs) |
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| [»] scaffold0554 (1 HSPs) |
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| [»] scaffold0087 (1 HSPs) |
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| [»] scaffold0492 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 86; Significance: 3e-41; HSPs: 38)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 21 - 146
Target Start/End: Complemental strand, 15435199 - 15435074
Alignment:
| Q |
21 |
aatcttgagccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatt |
120 |
Q |
| |
|
||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||| |
|
|
| T |
15435199 |
aatcttgagccggctctagttttttattgagagaaactccaacttctctcaaaaccttctttcttcttcattcatcaaggaggggcggttttaggtcatt |
15435100 |
T |
|
| Q |
121 |
ttttgatctagaactagccctctaca |
146 |
Q |
| |
|
||||||||||||| | ||||||||| |
|
|
| T |
15435099 |
ttttgatctagaatcaaccctctaca |
15435074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 34878592 - 34878486
Alignment:
| Q |
27 |
gagccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
||||||| |||| |||| ||||||||||||||||||||||||| |||| ||||||||| ||| |||||| |||||| |||||||||||||||||||||| |
|
|
| T |
34878592 |
gagccggccctagttttctagtgagagaaactccaacttctctttaaactttctttctctttcgttcatcgaggaggggtggttttaggtcattttttga |
34878493 |
T |
|
| Q |
127 |
tctagaa |
133 |
Q |
| |
|
|||||| |
|
|
| T |
34878492 |
cctagaa |
34878486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 126
Target Start/End: Complemental strand, 35484698 - 35484600
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
|||||| |||| |||| |||||||||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||| ||||||||||||||| |
|
|
| T |
35484698 |
agccggccctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttgtaggtcattttttga |
35484600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 31983965 - 31984057
Alignment:
| Q |
41 |
tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||| |||||||| ||| |||||||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
31983965 |
tttttagtgagagaaactccaacttctctctaaactttctttcttctttgttcatcaaggagaggtggttttaggtcattttttgacctagaa |
31984057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 133
Target Start/End: Complemental strand, 10776768 - 10776675
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||||||| |||||||||||||| ||||||| |||| |||||||||||||||||||| |||| | |||||||||| ||||||||||| |||||| |
|
|
| T |
10776768 |
ttttttagggagagaaactccaatttctctctaaactttctttctccttcattcatcgaggaagggtggttttagatcattttttgacctagaa |
10776675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 7337983 - 7337865
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat |
127 |
Q |
| |
|
|||||| |||| |||| |||||| ||||||| ||||||||||| |||| ||||||||||||| |||||| |||||| ||||| || ||||||||||||| |
|
|
| T |
7337983 |
agccggccctagttttctagtgaaagaaacttcaacttctctctaaactttctttctccttcgttcatcgaggagggatggttctatgtcattttttgat |
7337884 |
T |
|
| Q |
128 |
ctagaactagccctctaca |
146 |
Q |
| |
|
|||||| | ||||||||| |
|
|
| T |
7337883 |
ctagaatcacccctctaca |
7337865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 55 - 133
Target Start/End: Complemental strand, 7837059 - 7836981
Alignment:
| Q |
55 |
aactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||||||||||||||| |||||||||||||| ||| |||||| |||| | ||||||||||||||||||||||||||||| |
|
|
| T |
7837059 |
aactccaacttctctctaaaccttctttctctttcgttcatcgaggaagggtggttttaggtcattttttgatctagaa |
7836981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 14872423 - 14872509
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
|||||||||||||||||||||||||||| || ||| |||||||| ||||||||||| || |||||||||||| ||||||||||||| |
|
|
| T |
14872423 |
ttttttagtgagagaaactccaacttctttctgaactttctttcttcttcattcatcgagaaggtgtggttttcggtcattttttga |
14872509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 45415343 - 45415449
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc |
139 |
Q |
| |
|
|||| |||||||||||||| |||||||||| |||| |||||||| |||| || ||| |||||| ||||||||||||||||||||||||||||| | || |
|
|
| T |
45415343 |
ttttctagtgagagaaacttcaacttctctttaaactttctttcttcttcgtttatcgaggaggggtggttttaggtcattttttgatctagaatcaccc |
45415442 |
T |
|
| Q |
140 |
ctctaca |
146 |
Q |
| |
|
||||||| |
|
|
| T |
45415443 |
ctctaca |
45415449 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 146
Target Start/End: Complemental strand, 29738941 - 29738838
Alignment:
| Q |
43 |
tttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctc |
142 |
Q |
| |
|
||||| ||||||||||||||| |||||| |||| ||||||||||||| |||||| |||||| |||||||||||||| ||||| | |||||| | ||||| |
|
|
| T |
29738941 |
tttagagagagaaactccaacatctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcaattttttacctagaatcacccctc |
29738842 |
T |
|
| Q |
143 |
taca |
146 |
Q |
| |
|
|||| |
|
|
| T |
29738841 |
taca |
29738838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 133
Target Start/End: Original strand, 18939109 - 18939199
Alignment:
| Q |
43 |
tttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||||||||||||||| || |||||||| || |||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
18939109 |
tttagtgagagaaacttcaccttctctctaagttttctttctccttcattaatcgaggagaggtggttttaggtcattttttgatctagaa |
18939199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 51 - 121
Target Start/End: Original strand, 41176977 - 41177047
Alignment:
| Q |
51 |
gagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattt |
121 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||||||||| |||||| |||||| ||||||||||||||||| |
|
|
| T |
41176977 |
gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattt |
41177047 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 35 - 124
Target Start/End: Original strand, 3228049 - 3228138
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
|||| |||| |||| ||| ||||||||||||||| | ||| || |||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
3228049 |
cctagttttctagttagaaaaactccaacttctccctaaattttatttctccttcattcatcaaggaggggtggttttaggtcatttttt |
3228138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 23 - 133
Target Start/End: Original strand, 1742048 - 1742158
Alignment:
| Q |
23 |
tcttgagccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttt |
122 |
Q |
| |
|
|||| |||||| | || |||| ||||||||||||||| ||||||| || |||| | ||||||| ||| ||||||||||| |||||||||||||||||| |
|
|
| T |
1742048 |
tcttcagccggccttagttttctagtgagagaaactcaaacttctttctaaacttcctttctctttcgttcatcaaggaatggtggttttaggtcatttt |
1742147 |
T |
|
| Q |
123 |
ttgatctagaa |
133 |
Q |
| |
|
|||| |||||| |
|
|
| T |
1742148 |
ttgacctagaa |
1742158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 44915425 - 44915515
Alignment:
| Q |
36 |
ctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtg-tggttttaggtcattttttg |
125 |
Q |
| |
|
|||||||| |||||||| ||| | ||||||||||| |||| ||||||||| |||||||||| |||||| | |||||||||||||||||||| |
|
|
| T |
44915425 |
ctaattttctagtgagaaaaatttcaacttctctctaaactttctttctcattcattcatcgaggaggggttggttttaggtcattttttg |
44915515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 5983621 - 5983713
Alignment:
| Q |
41 |
tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
||||||| |||||||||| |||||||||| |||| || |||||||||| |||||| |||||| ||||||||| ||||||||||| |||||| |
|
|
| T |
5983621 |
tttttagagagagaaactttaacttctctctaaactttatttctccttcgttcatcgaggagggatggttttagatcattttttgacctagaa |
5983713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 37 - 133
Target Start/End: Original strand, 21686654 - 21686750
Alignment:
| Q |
37 |
taattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||||||||||||||||||||| |||||| | || ||| ||||||||| ||| |||||| ||||| || ||||||||||||||||||||||||| |
|
|
| T |
21686654 |
taattttttagtgagagaaactgcaacttttttctaaattttctttctctttcgttcatcgaggagagatgattttaggtcattttttgatctagaa |
21686750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 40 - 116
Target Start/End: Original strand, 26535184 - 26535260
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggt |
116 |
Q |
| |
|
|||| ||||||||||||||| |||||||||| |||| |||| |||||||| ||||||||||| | |||||||||||| |
|
|
| T |
26535184 |
ttttctagtgagagaaactctaacttctctctaaactttctctctccttcgttcatcaaggatgagtggttttaggt |
26535260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 51916970 - 51916874
Alignment:
| Q |
30 |
ccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
|||| |||| ||||||||||||||||||| ||| || |||| |||| ||||||||||||| ||||| |||||| ||||||||||| ||||||||| |
|
|
| T |
51916970 |
ccggccctagttttttagtgagagaaacttcaatttttctctaaactttctttctccttcgttcatagaggaggggtggttttaggctattttttga |
51916874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 49626694 - 49626780
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
|||||| |||||||||||||||||||||||| || ||| ||||| |||| ||||| |||||| |||||||||||||||| ||||| |
|
|
| T |
49626694 |
tttttttgtgagagaaactccaacttctctctaagtgttccttctctttcactcatcgaggaggggtggttttaggtcattctttga |
49626780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 32679412 - 32679321
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
|||| ||||||||||||||||| |||||||| |||| || ||||||||| |||| || || |||||| ||||||||| |||||||||||| |
|
|
| T |
32679412 |
cctagttttttagtgagagaaattccaacttttctctaagttttctttctctttcactcgtcgaggaggggtggttttatgtcattttttga |
32679321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 133
Target Start/End: Original strand, 15836001 - 15836070
Alignment:
| Q |
64 |
ttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
||||||| ||| ||||||||| || ||||||||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
15836001 |
ttctctcttaactttctttctctttgattcatcaaggagaggtggttttaggtcattttttgacctagaa |
15836070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 27456324 - 27456397
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggtttta |
113 |
Q |
| |
|
||||||||||||| ||||| |||||||| || |||| ||||||||||||||||| || |||||| |||||||| |
|
|
| T |
27456324 |
ttttttagtgagaaaaacttcaacttctttctaaactttctttctccttcattcgtcgaggagggatggtttta |
27456397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 32394820 - 32394869
Alignment:
| Q |
77 |
ttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
||||||||||||| |||||| |||||| |||||||||||||||||||||| |
|
|
| T |
32394820 |
ttctttctccttcgttcatcgaggaggggtggttttaggtcattttttga |
32394869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 133
Target Start/End: Original strand, 45789349 - 45789442
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||||||||||||||||||| | ||||||| ||| || ||||| ||||||||||| |||| ||||||||||||||||||||| |||||| |
|
|
| T |
45789349 |
ttttttagtgagagaaactctacgttctctctaaattttatttctacttcattcatcgaggattgatggttttaggtcattttttgacctagaa |
45789442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 49 - 133
Target Start/End: Complemental strand, 11462747 - 11462663
Alignment:
| Q |
49 |
gagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||||||||| ||| ||||||| |||| ||||||||||||| ||||| | |||| ||| |||||||| ||||||||| |||||| |
|
|
| T |
11462747 |
gagagaaacttcaatttctctctaaactttctttctccttcgttcattgacgaggggtgattttaggttattttttgacctagaa |
11462663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 35462346 - 35462262
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
|||||||||| ||||||||| ||||| |||| |||| ||||||||||||| || || || | | |||||||||||||||||||| |
|
|
| T |
35462346 |
ttttttagtgggagaaactctaacttatctctaaactttctttctccttcgtttattgagaatgggtggttttaggtcatttttt |
35462262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 122
Target Start/End: Original strand, 12634946 - 12635033
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttt |
122 |
Q |
| |
|
|||| |||||||||||||||||||| |||||||||| | || |||||| |||| || || |||| |||||||||||||||||||| |
|
|
| T |
12634946 |
cctagttttttagtgagagaaactcaaacttctctctatgttttttttctctttcactcgtcgaggatgtgtggttttaggtcatttt |
12635033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 8212178 - 8212128
Alignment:
| Q |
80 |
tttctccttcattcatcaaggaggtgtggttttaggtcattttttgatcta |
130 |
Q |
| |
|
|||||||||||||||||||||||| ||| |||||| | ||||||||||||| |
|
|
| T |
8212178 |
tttctccttcattcatcaaggaggggtgcttttagattattttttgatcta |
8212128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 44543057 - 44543143
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
||||||||||||||||||||||||||||||| || ||| ||||| |||| ||||| |||| | ||| |||||||| ||| ||||| |
|
|
| T |
44543057 |
ttttttagtgagagaaactccaacttctctctaagttttccttctctttcactcatcgaggaagggtgcttttaggttattctttga |
44543143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 120
Target Start/End: Original strand, 4413091 - 4413168
Alignment:
| Q |
43 |
tttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatt |
120 |
Q |
| |
|
||||| ||||||||||| ||||| |||| |||| |||||||| |||| || ||| |||||| || ||||||||||||| |
|
|
| T |
4413091 |
tttagagagagaaactctaacttttctctaaactttctttcttcttcgtttatcgaggaggagtagttttaggtcatt |
4413168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 940149 - 940233
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
||||||||||||| |||||| || ||||||| ||| ||||||||| || |||||| |||| | ||||||||| |||||||||| |
|
|
| T |
940149 |
ttttttagtgagaaaaactctaaattctctctaaattttctttctcttttcttcatcgaggatgagtggttttaagtcatttttt |
940233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 21947925 - 21947843
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt |
123 |
Q |
| |
|
|||| |||||||||||||| ||| || |||| |||| |||||||| |||| |||||| |||| | |||||||||||| |||||| |
|
|
| T |
21947925 |
ttttctagtgagagaaacttcaatttttctctaaactttctttct-cttcgttcatcgaggatgggtggttttaggttattttt |
21947843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 6218140 - 6218042
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||| || ||||| || || | ||||||||||| || |||||| ||||||||||| |||||| |
|
|
| T |
6218140 |
cctaattttttagtgagggaaattccaacttctctcttaattatctttttcattaactcatcaaggagagatgattttagttcattttttgacctagaa |
6218042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 31692733 - 31692685
Alignment:
| Q |
78 |
tctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
|||||||| |||| ||||| |||| ||||| |||||||||||||||||| |
|
|
| T |
31692733 |
tctttctctttcactcatcgaggatgtgtgattttaggtcattttttga |
31692685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 133
Target Start/End: Complemental strand, 34413402 - 34413306
Alignment:
| Q |
37 |
taattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
||||||||||||||||||||||| |||||||| || || |||||| |||| | ||| || ||| ||| |||||||||| ||||| |||||||| |
|
|
| T |
34413402 |
taattttttagtgagagaaactctgccttctctctaagttttttttctctttcacttatcgagtaggggtgattttaggtcaattttttatctagaa |
34413306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 67
Target Start/End: Original strand, 47132694 - 47132726
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttct |
67 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| |
|
|
| T |
47132694 |
cctagttttttagtgagagaaactccaacttct |
47132726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 133
Target Start/End: Original strand, 50377149 - 50377204
Alignment:
| Q |
77 |
ttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
||||||||||||| |||||| | |||| ||||||||||||||||||||| |||||| |
|
|
| T |
50377149 |
ttctttctccttcgttcatcgaagagga-tggttttaggtcattttttgacctagaa |
50377204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 47)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 45568757 - 45568659
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||| |||| ||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||| |
|
|
| T |
45568757 |
cctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgatctagaa |
45568659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 10232846 - 10232957
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac |
134 |
Q |
| |
|
|||| |||| ||||| |||||||||||||||||||| |||| ||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
10232846 |
cctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcaaggaggggtggttttaggtcattttttgacctagaat |
10232945 |
T |
|
| Q |
135 |
tagccctctaca |
146 |
Q |
| |
|
| ||||||||| |
|
|
| T |
10232946 |
cacccctctaca |
10232957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 40487101 - 40487199
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| |||| ||||||||||||| |||||| |||||| ||| |||||||||||||||||| |||||| |
|
|
| T |
40487101 |
cctaattttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtgattttaggtcattttttgacctagaa |
40487199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 47895927 - 47896038
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac |
134 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||| ||| ||||||||||| |||||| |
|
|
| T |
47895927 |
cctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttatagatcattttttgacctagaat |
47896026 |
T |
|
| Q |
135 |
tagccctctaca |
146 |
Q |
| |
|
| ||||||||| |
|
|
| T |
47896027 |
cacccctctaca |
47896038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 124
Target Start/End: Original strand, 9998242 - 9998331
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
|||| |||| ||||| |||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||||||||| |
|
|
| T |
9998242 |
cctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcatttttt |
9998331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 133
Target Start/End: Original strand, 40556480 - 40556585
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat |
127 |
Q |
| |
|
|||||| |||| |||| ||||| ||||||||||||||||| || |||| ||||||||| ||| |||||| |||||| |||||||||||||||||||||| |
|
|
| T |
40556480 |
agccggccctagttttctagtgggagaaactccaacttctttctaaactttctttctcattcgttcatcgaggaggggtggttttaggtcattttttgac |
40556579 |
T |
|
| Q |
128 |
ctagaa |
133 |
Q |
| |
|
|||||| |
|
|
| T |
40556580 |
ctagaa |
40556585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 21431401 - 21431489
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt |
123 |
Q |
| |
|
|||| |||| ||||| |||||||||||||||||||| |||| ||||||||||||| |||||| |||||| ||||||||||||||||||| |
|
|
| T |
21431401 |
cctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttt |
21431489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 146
Target Start/End: Complemental strand, 12050953 - 12050850
Alignment:
| Q |
43 |
tttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctc |
142 |
Q |
| |
|
||||| |||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||||| || |||||||||| ||||| | ||||| |
|
|
| T |
12050953 |
tttagagagagaaactccaacttctctctaaattttctttctccttcgttcatcaaggatgtgtggttttaagttattttttgatttagaatcacccctc |
12050854 |
T |
|
| Q |
143 |
taca |
146 |
Q |
| |
|
|||| |
|
|
| T |
12050853 |
taca |
12050850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 48651048 - 48650957
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
|||| |||| |||||| ||||||||||||||||||| |||| |||||||||| || |||||| |||||| |||||||||||||||||||||| |
|
|
| T |
48651048 |
cctagttttctagtgaaagaaactccaacttctctctaaactttctttctccatcgttcatcgaggaggggtggttttaggtcattttttga |
48650957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 133
Target Start/End: Original strand, 38545616 - 38545709
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||| |||||||||||||| ||||||||||| |||| ||||||||||||| ||||| ||||| |||||||||||||||||||||| |||||| |
|
|
| T |
38545616 |
ttttctagtgagagaaacttcaacttctctctaaactttctttctccttcgttcattgaggagtggtggttttaggtcattttttgacctagaa |
38545709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 47042365 - 47042276
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
||||||||| |||||| ||||||||||||||||||| |||| || ||| |||||| |||||| |||||| |||||||||||||||||||| |
|
|
| T |
47042365 |
cctaattttctagtgaaagaaactccaacttctctctaaactttatttatccttcgttcatcgaggaggggtggttttaggtcatttttt |
47042276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 32701269 - 32701385
Alignment:
| Q |
30 |
ccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatct |
129 |
Q |
| |
|
|||| |||| |||| ||||| |||||||||||||||||| |||| ||||||||||||| |||||| ||| || |||||||||||||||||||||| || |
|
|
| T |
32701269 |
ccggccctagttttctagtggaagaaactccaacttctctttaaactttctttctccttcgttcatcgaggtggggtggttttaggtcattttttgacct |
32701368 |
T |
|
| Q |
130 |
agaactagccctctaca |
146 |
Q |
| |
|
|||| | ||||||||| |
|
|
| T |
32701369 |
agaatcatccctctaca |
32701385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 35865246 - 35865158
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt |
123 |
Q |
| |
|
|||| |||| |||||||||||||| ||||||||||| |||| ||||||||||||| ||| || |||||| ||||||||||||||||||| |
|
|
| T |
35865246 |
cctagttttctagtgagagaaacttcaacttctctctaaactttctttctccttcgttcctcgaggaggggtggttttaggtcattttt |
35865158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 122
Target Start/End: Original strand, 10108014 - 10108101
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttt |
122 |
Q |
| |
|
|||| |||| ||||| |||||||||||||||||||| |||| |||||||||||| |||||| |||||| |||||||||||||||||| |
|
|
| T |
10108014 |
cctagttttctagtgggagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggtggttttaggtcatttt |
10108101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 6955016 - 6954898
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat |
127 |
Q |
| |
|
|||||| |||| |||| ||||| ||||||||||||||||||| |||| ||||||||||||| |||| |||||| ||| |||||||||||||||||| |
|
|
| T |
6955016 |
agccggccctagttttctagtggaagaaactccaacttctctctaaactttctttctccttcgttcactgaggaggggtgattttaggtcattttttgac |
6954917 |
T |
|
| Q |
128 |
ctagaactagccctctaca |
146 |
Q |
| |
|
|||||| | ||||||||| |
|
|
| T |
6954916 |
ctagaatcacccctctaca |
6954898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 35 - 124
Target Start/End: Original strand, 10229250 - 10229339
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
|||| |||| ||||| |||||||||||| ||||||| |||| ||||||||||||| |||||| |||||| ||||||||||||| |||||| |
|
|
| T |
10229250 |
cctagttttctagtgggagaaactccaatttctctctaaactttctttctccttctttcatcgaggaggggtggttttaggtcttttttt |
10229339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 43488917 - 43488849
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatc |
96 |
Q |
| |
|
|||||| |||| ||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||| |
|
|
| T |
43488917 |
agccggccctagttttttagtgagagaaacttcaacttctctctaaactttctttctccttcattcatc |
43488849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 7449217 - 7449124
Alignment:
| Q |
32 |
ggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
||||||| |||| || ||||||||||||||||||||||| |||| || |||||| ||| ||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
7449217 |
ggtcctagttttctaatgagagaaactccaacttctctc-aaactttttttctctttcgttcattaaggagggctggttttaggtcattttttga |
7449124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 7457359 - 7457266
Alignment:
| Q |
32 |
ggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
||||||| |||| || ||||||||||||||||||||||| |||| || |||||| ||| ||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
7457359 |
ggtcctagttttctaatgagagaaactccaacttctctc-aaactttttttctctttcgttcattaaggagggctggttttaggtcattttttga |
7457266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 33579649 - 33579755
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc |
139 |
Q |
| |
|
|||| |||||||||||||| ||||||||||| |||| |||||| |||||| |||||| | || | ||||||||| |||||||||||| |||||| | || |
|
|
| T |
33579649 |
ttttctagtgagagaaacttcaacttctctctaaactttctttatccttcgttcatcgaagaagggtggttttaagtcattttttgacctagaatcaccc |
33579748 |
T |
|
| Q |
140 |
ctctaca |
146 |
Q |
| |
|
||||||| |
|
|
| T |
33579749 |
ctctaca |
33579755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 126
Target Start/End: Complemental strand, 36461751 - 36461653
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
|||||| |||| |||| ||||| |||||||| || ||||||| |||| ||||||||||||| |||||| |||| | |||||||||||||||||||||| |
|
|
| T |
36461751 |
agccggccctagttttctagtgtgagaaacttcatattctctctaaactttctttctccttcgttcatcgaggatgagtggttttaggtcattttttga |
36461653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 9797830 - 9797732
Alignment:
| Q |
45 |
tagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctcta |
144 |
Q |
| |
|
|||||||||||||||||||||||||| |||| || |||||||||| ||||| ||| |||||||||||||||||||||| |||||| | ||||||| |
|
|
| T |
9797830 |
tagtgagagaaactccaacttctctctaaactttatttctccttcgttcat---tgagaggtggttttaggtcattttttgacctagaatcacccctcta |
9797734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 21534116 - 21534012
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc |
139 |
Q |
| |
|
|||||||||||||||||||| || ||||||| |||| ||||||||||||| || ||| |||| | ||||||||||||| ||||||| |||||| | || |
|
|
| T |
21534116 |
ttttttagtgagagaaactctaatttctctctaaactttctttctccttcgttaatcgaggatgggtggttttaggtc--tttttgacctagaatcaccc |
21534019 |
T |
|
| Q |
140 |
ctctaca |
146 |
Q |
| |
|
||||||| |
|
|
| T |
21534018 |
ctctaca |
21534012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 31272120 - 31272021
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaagga-ggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| || |||||| |||||| |||||| |||| |||||| |||||||| ||||||| | |||||| |
|
|
| T |
31272120 |
cctaattttctagtgagagaaactccaacttctctctaagttttctttttccttcgttcatcgaggagggtgtgattttaggttattttttaacctagaa |
31272021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 50194606 - 50194505
Alignment:
| Q |
25 |
ttgagccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||||||||||||||| || ||| ||||| |||| || || || ||| |||||||||| ||||||||| |
|
|
| T |
50194606 |
ttgagccgaccctagttttttagtgagagaaactccaacttctctctaagttttcgttctctttcactcgtcgagaaggagtggttttagatcatttttt |
50194507 |
T |
|
| Q |
125 |
ga |
126 |
Q |
| |
|
|| |
|
|
| T |
50194506 |
ga |
50194505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 52923428 - 52923340
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt |
123 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||||| |||| ||||||||||||| ||||| ||||| || |||||| ||||||||| |
|
|
| T |
52923428 |
cctatttttttagtggaagaaactccaacttctctctaaactttctttctccttcgttcattgaggagaggtagttttaagtcattttt |
52923340 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 118
Target Start/End: Original strand, 43016631 - 43016714
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtca |
118 |
Q |
| |
|
|||| |||| ||||||||||||||| |||||||||| ||| ||||||||| ||| |||||| |||| | |||||||||||||| |
|
|
| T |
43016631 |
cctagttttctagtgagagaaactctaacttctctctaaattttctttctctttcgttcatcgaggaagggtggttttaggtca |
43016714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 629214 - 629128
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
|||||||||||||||||||| |||||||||| || ||| ||| | |||| ||||| |||||| |||||||||||||||| ||||| |
|
|
| T |
629214 |
ttttttagtgagagaaactctaacttctctctaagttttccttccctttcactcatcgaggaggggtggttttaggtcattctttga |
629128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 953715 - 953631
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
|||| ||||||||||||||||| ||||||| || ||||||||||||||||||| ||||| ||||||||||||| |||||| |
|
|
| T |
953715 |
ttttatagtgagagaaactccacattctctctaagttttctttctccttcattcattgaggagaagtggttttaggtcttttttt |
953631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 75
Target Start/End: Complemental strand, 20988075 - 20988028
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaac |
75 |
Q |
| |
|
|||||| |||| ||||||||||||||||||||||||||||||| |||| |
|
|
| T |
20988075 |
agccggccctagttttttagtgagagaaactccaacttctctctaaac |
20988028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 26276094 - 26276015
Alignment:
| Q |
47 |
gtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
||||||||||||| || |||||| |||| |||||||||||| |||||| ||||| |||||||||||| ||||||||| |
|
|
| T |
26276094 |
gtgagagaaactctaatttctctgtaaactttctttctcctttattcattgaggagaggtggttttaggtaattttttga |
26276015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 20465238 - 20465192
Alignment:
| Q |
77 |
ttctttctccttcattcatcaaggaggtgtggttttaggtcattttt |
123 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||||| ||||||||| |
|
|
| T |
20465238 |
ttctttctccttcattcatcaagtaggggtggttttatgtcattttt |
20465192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 54148793 - 54148855
Alignment:
| Q |
64 |
ttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
||||||| |||| ||||||||||||| | ||| |||||| |||||||||||||||||||||| |
|
|
| T |
54148793 |
ttctctctaaactttctttctccttcgtcaatcgaggaggggtggttttaggtcattttttga |
54148855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 9688541 - 9688488
Alignment:
| Q |
41 |
tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattca |
94 |
Q |
| |
|
|||||||||||||||||| ||||||||||| ||| |||||||| ||||||||| |
|
|
| T |
9688541 |
tttttagtgagagaaacttcaacttctctctaaattttctttcttcttcattca |
9688488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 126
Target Start/End: Original strand, 29921820 - 29921920
Alignment:
| Q |
28 |
agccggtcctaatttttt-agtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggtttt-aggtcattttttg |
125 |
Q |
| |
|
||||||||||| |||||| ||| ||||| |||| | |||||||| || ||||||||| ||||||| || |||||| |||||||| ||||||||||||| |
|
|
| T |
29921820 |
agccggtcctagtttttttagtaagagatactctaccttctctctaagttttctttctctttcattcgtcgaggaggggtggtttttaggtcattttttg |
29921919 |
T |
|
| Q |
126 |
a |
126 |
Q |
| |
|
| |
|
|
| T |
29921920 |
a |
29921920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 126
Target Start/End: Original strand, 29970973 - 29971073
Alignment:
| Q |
28 |
agccggtcctaatttttt-agtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggtttt-aggtcattttttg |
125 |
Q |
| |
|
||||||||||| |||||| ||| ||||| |||| | |||||||| || ||||||||| ||||||| || |||||| |||||||| ||||||||||||| |
|
|
| T |
29970973 |
agccggtcctagtttttttagtaagagatactctaccttctctctaagttttctttctctttcattcgtcgaggaggggtggtttttaggtcattttttg |
29971072 |
T |
|
| Q |
126 |
a |
126 |
Q |
| |
|
| |
|
|
| T |
29971073 |
a |
29971073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 37040575 - 37040635
Alignment:
| Q |
52 |
agaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggtttt |
112 |
Q |
| |
|
|||||||| ||||||| || |||| ||||||||| ||| ||||||||||||| |||||||| |
|
|
| T |
37040575 |
agaaactcaaacttctttctaaactttctttctctttcgttcatcaaggaggggtggtttt |
37040635 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 70
Target Start/End: Complemental strand, 1803281 - 1803246
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctc |
70 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| |
|
|
| T |
1803281 |
cctaattttttagtgaaagaaactccaacttctctc |
1803246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 133
Target Start/End: Original strand, 7546397 - 7546484
Alignment:
| Q |
46 |
agtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
||||||||||| || | |||||||| || ||||||||| ||| ||||| |||||| ||| |||||||||| |||||||||||||| |
|
|
| T |
7546397 |
agtgagagaaattcaatcttctctctaagttttctttctctctcactcatcgaggaggggtgattttaggtcaatttttgatctagaa |
7546484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 21290132 - 21290034
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| || ||||| ||| |||| |||| ||||| ||| |||||||||| ||||||| |||||| |
|
|
| T |
21290132 |
cctaattttttagtgagagaaactctgtcttctctctaagttttcttcctctttcactcatggaggagaggtgattttaggtcaatttttgacctagaa |
21290034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 70
Target Start/End: Complemental strand, 53808170 - 53808140
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctc |
70 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
53808170 |
ttttttagtgagagaaactccaacttctctc |
53808140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 4821625 - 4821674
Alignment:
| Q |
77 |
ttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
||||||||| ||||||| || || ||| |||||||||||||||||||||| |
|
|
| T |
4821625 |
ttctttctctttcattcgtcgagaaggggtggttttaggtcattttttga |
4821674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 36910975 - 36910934
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctct |
69 |
Q |
| |
|
|||||| |||| |||| ||||||||||||||||||||||||| |
|
|
| T |
36910975 |
agccggccctagttttctagtgagagaaactccaacttctct |
36910934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 126
Target Start/End: Complemental strand, 23800230 - 23800131
Alignment:
| Q |
30 |
ccggtcctaattttttagtgagagaaactccaactt-ctctcaaaaccttctttctccttcattcatcaaggaggtg--tggttttaggtcattttttga |
126 |
Q |
| |
|
|||| |||| |||| |||||||||||||| ||| || ||||| ||| || ||||||||||||||||| | |||| | ||||||||||| ||||||||| |
|
|
| T |
23800230 |
ccggccctagttttctagtgagagaaacttcaaatttctctctaaattttttttctccttcattcatcgaagaggggggtggttttaggttattttttga |
23800131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 133
Target Start/End: Original strand, 29239184 - 29239212
Alignment:
| Q |
105 |
gtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
29239184 |
gtggttttaggtcattttttgatctagaa |
29239212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 29249024 - 29249080
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatc |
96 |
Q |
| |
|
|||||||||||||||||||| ||||||||| || |||||||||||||| ||||| |
|
|
| T |
29249024 |
ttttttagtgagagaaactctaacttctctttaatttttctttctccttcactcatc |
29249080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 46220459 - 46220543
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaagga-ggtgtggttttaggtcattttt |
123 |
Q |
| |
|
|||| |||||| ||||||| |||||||||| |||| ||||||||| || ||| || |||| || ||||||||||||||||||| |
|
|
| T |
46220459 |
ttttctagtgatagaaactataacttctctctaaactttctttctcttttatttattgaggaaggggtggttttaggtcattttt |
46220543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 34)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 146
Target Start/End: Complemental strand, 31013882 - 31013771
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac |
134 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||||||||||| |||||| |
|
|
| T |
31013882 |
cctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaat |
31013783 |
T |
|
| Q |
135 |
tagccctctaca |
146 |
Q |
| |
|
| ||||||||| |
|
|
| T |
31013782 |
cacccctctaca |
31013771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 35 - 134
Target Start/End: Original strand, 10377475 - 10377574
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac |
134 |
Q |
| |
|
|||| |||| ||||| |||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
10377475 |
cctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaac |
10377574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 27110770 - 27110680
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatcta |
130 |
Q |
| |
|
|||| |||||||||||||||||||||||||| |||| |||||||||||||||||||| | || | |||||||||||||||||||||||||| |
|
|
| T |
27110770 |
ttttctagtgagagaaactccaacttctctctaaactttctttctccttcattcatcgaagatgggtggttttaggtcattttttgatcta |
27110680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 133
Target Start/End: Complemental strand, 25191372 - 25191279
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| |||||||||||| |||||| ||||| ||| |||||||||||||||||| |||||| |
|
|
| T |
25191372 |
ttttttagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggagaggtgattttaggtcattttttgacctagaa |
25191279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 17693919 - 17693836
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt |
123 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||| |||||| || |||||||||||||||| |
|
|
| T |
17693919 |
ttttttagtgagagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggttgttttaggtcattttt |
17693836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 8412664 - 8412571
Alignment:
| Q |
31 |
cggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
|||||||| |||| ||||||||||||||| |||||||||| |||| ||||||||| ||| |||||| || ||| |||||||||||||||||||| |
|
|
| T |
8412664 |
cggtcctagttttctagtgagagaaactctaacttctctctaaactttctttctcattcgttcatcgagtaggggtggttttaggtcatttttt |
8412571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 33 - 126
Target Start/End: Complemental strand, 45446124 - 45446031
Alignment:
| Q |
33 |
gtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
|||||| |||| |||||||||||||||||||||||||| |||| ||||||||||||| |||||| |||| | || |||||| |||||||||||| |
|
|
| T |
45446124 |
gtcctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaagggtagttttatgtcattttttga |
45446031 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 146
Target Start/End: Original strand, 37971086 - 37971181
Alignment:
| Q |
48 |
tgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctaca |
146 |
Q |
| |
|
||||||||||||||||||||||| ||| |||||||| ||||||||||| |||| |||||||||||||||||||||| |||||| | ||||||||| |
|
|
| T |
37971086 |
tgagagaaactccaacttctctctaaattttctttcttcttcattcatc---gaggagtggttttaggtcattttttgacctagaatcacccctctaca |
37971181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 8980980 - 8981066
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
||||||||||||||||||||||||||||||| || ||| ||||| |||| || || |||||| |||||||||||||||||||||| |
|
|
| T |
8980980 |
ttttttagtgagagaaactccaacttctctctaagttttcgttctcattcactcgtcgaggaggggtggttttaggtcattttttga |
8981066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 126
Target Start/End: Original strand, 23230430 - 23230512
Alignment:
| Q |
43 |
tttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
||||| |||||||||||||||||||||| |||| ||||||||||||| |||||| |||| | || ||||||||||| ||||||| |
|
|
| T |
23230430 |
tttagagagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggt-gttttaggtcaatttttga |
23230512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 143
Target Start/End: Original strand, 15344090 - 15344192
Alignment:
| Q |
41 |
tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccc |
140 |
Q |
| |
|
|||||||||||||||||||||||||||||| || || ||||| |||| ||||| |||||| |||||||||||||||| ||||| ||| || || ||| |
|
|
| T |
15344090 |
tttttagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccc |
15344189 |
T |
|
| Q |
141 |
tct |
143 |
Q |
| |
|
||| |
|
|
| T |
15344190 |
tct |
15344192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 143
Target Start/End: Original strand, 15433155 - 15433257
Alignment:
| Q |
41 |
tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccc |
140 |
Q |
| |
|
|||||||||||||||||||||||||||||| || || ||||| |||| ||||| |||||| |||||||||||||||| ||||| ||| || || ||| |
|
|
| T |
15433155 |
tttttagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccc |
15433254 |
T |
|
| Q |
141 |
tct |
143 |
Q |
| |
|
||| |
|
|
| T |
15433255 |
tct |
15433257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 41 - 143
Target Start/End: Original strand, 15524459 - 15524561
Alignment:
| Q |
41 |
tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccc |
140 |
Q |
| |
|
|||||||||||||||||||||||||||||| || || ||||| |||| ||||| |||||| |||||||||||||||| ||||| ||| || || ||| |
|
|
| T |
15524459 |
tttttagtgagagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccc |
15524558 |
T |
|
| Q |
141 |
tct |
143 |
Q |
| |
|
||| |
|
|
| T |
15524559 |
tct |
15524561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 3673236 - 3673312
Alignment:
| Q |
47 |
gtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt |
123 |
Q |
| |
|
|||| ||||||| ||||||||||| |||| |||||||||||| ||||||| | |||| |||||||||||||||||| |
|
|
| T |
3673236 |
gtgaaagaaacttcaacttctctctaaactttctttctcctttattcatcgaagagggttggttttaggtcattttt |
3673312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 146
Target Start/End: Complemental strand, 7677579 - 7677480
Alignment:
| Q |
47 |
gtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctaca |
146 |
Q |
| |
|
|||||| |||||| || ||||||| ||| |||||||| |||| ||||| |||||| |||||||||||||||||||||| |||||| | ||||||||| |
|
|
| T |
7677579 |
gtgagataaactctaatttctctctaaattttctttcttcttcgttcattgaggaggggtggttttaggtcattttttgacctagaatcacccctctaca |
7677480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 20560050 - 20559944
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc |
139 |
Q |
| |
|
|||| ||| ||||||||| |||||||||||| |||| || ||||| |||| |||||| | |||| |||||||||| |||||||| || |||||| | || |
|
|
| T |
20560050 |
ttttctagggagagaaacaccaacttctctctaaactttttttcttcttcgttcatcgatgaggggtggttttagatcatttttggacctagaatcaccc |
20559951 |
T |
|
| Q |
140 |
ctctaca |
146 |
Q |
| |
|
||||||| |
|
|
| T |
20559950 |
ctctaca |
20559944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 20571612 - 20571506
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc |
139 |
Q |
| |
|
|||| ||| ||||||||| |||||||||||| |||| || ||||| |||| |||||| | |||| |||||||||| |||||||| || |||||| | || |
|
|
| T |
20571612 |
ttttctagggagagaaacaccaacttctctctaaactttttttcttcttcgttcatcgatgaggggtggttttagatcatttttggacctagaatcaccc |
20571513 |
T |
|
| Q |
140 |
ctctaca |
146 |
Q |
| |
|
||||||| |
|
|
| T |
20571512 |
ctctaca |
20571506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 130
Target Start/End: Original strand, 28897494 - 28897584
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatcta |
130 |
Q |
| |
|
||||||| ||||||||||| |||||||| | |||| || |||| |||||||| || |||||| ||||||||| |||||||||||||||| |
|
|
| T |
28897494 |
ttttttaatgagagaaacttcaacttctttttaaactctcgttcttcttcattcgtcgaggaggggtggttttaagtcattttttgatcta |
28897584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 123
Target Start/End: Complemental strand, 7883544 - 7883463
Alignment:
| Q |
42 |
ttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt |
123 |
Q |
| |
|
||||||||||||||||| |||||||| || ||| ||||||||| ||| |||||| | || | ||||||||||||||||||| |
|
|
| T |
7883544 |
ttttagtgagagaaacttcaacttctttctaaattttctttctcattcgttcatcgatgatgagtggttttaggtcattttt |
7883463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 133
Target Start/End: Complemental strand, 20553551 - 20553458
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||| ||| ||||||||| ||||||||||| |||| || ||||| |||| |||||| |||||| |||||||||| |||||||| || |||||| |
|
|
| T |
20553551 |
ttttctagggagagaaacaccaacttctctttaaactttttttcttcttcgttcatcgaggaggggtggttttagatcatttttggacctagaa |
20553458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 33214930 - 33214853
Alignment:
| Q |
47 |
gtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
|||||| ||||| ||| ||||||| |||| ||||||||||||| |||||| |||| | ||||||||||||| |||||| |
|
|
| T |
33214930 |
gtgagacaaacttcaatttctctctaaactttctttctccttcgttcatcgaggatgggtggttttaggtcttttttt |
33214853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 14545215 - 14545123
Alignment:
| Q |
35 |
cctaatttttta-gtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
|||||||||||| || |||||||||||||||||||| ||| |||||||||||||| | ||||| | |||||||||||||||||||||| |
|
|
| T |
14545215 |
cctaattttttaagttcgagaaactccaacttctctctaaaaaaaatttctccttcattcgttaaggatgagtggttttaggtcattttttga |
14545123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 29617769 - 29617677
Alignment:
| Q |
34 |
tcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
||||| ||||||||||||||||| | ||||||||||| ||| || |||||| |||| | ||| | ||| ||| ||||||||||||||||||| |
|
|
| T |
29617769 |
tcctagttttttagtgagagaaatttcaacttctctctaaattttgtttctctttcacttatcgaagagatgttgttttaggtcattttttga |
29617677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 40211612 - 40211528
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
|||| |||||||||||||||||| |||||| ||| ||||||||||||| || ||| |||||| |||| ||||||| ||||||| |
|
|
| T |
40211612 |
ttttctagtgagagaaactccaatttctctttaaaatttctttctccttcgttaatcgaggaggggtggctttaggtaatttttt |
40211528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 1236999 - 1236913
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
||||||||||||||||||| ||||||||||| || ||| ||||| ||| |||| |||||| |||||||||||||||| ||||| |
|
|
| T |
1236999 |
ttttttagtgagagaaacttcaacttctctctaagttttccttctctttcgctcattgaggaggggtggttttaggtcattctttga |
1236913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 133
Target Start/End: Original strand, 8867603 - 8867705
Alignment:
| Q |
31 |
cggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatcta |
130 |
Q |
| |
|
|||||||| ||||||||| ||||||||| || ||||||| || ||||||||| ||||| |||| || | | ||| ||||| |||||||||||||||| |
|
|
| T |
8867603 |
cggtcctagttttttagttagagaaactacacattctctctaagttttctttctctttcatccatcgagtatgagtgattttaagtcattttttgatcta |
8867702 |
T |
|
| Q |
131 |
gaa |
133 |
Q |
| |
|
||| |
|
|
| T |
8867703 |
gaa |
8867705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 123
Target Start/End: Complemental strand, 24099567 - 24099484
Alignment:
| Q |
39 |
attttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt |
123 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| | ||||||||| |||| ||||| || ||| |||| |||||||||||||| |
|
|
| T |
24099567 |
attttttagtgagagaaacttcaacttctctctaggttttctttctctttcaatcatcgagtagg-gtggctttaggtcattttt |
24099484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 29937905 - 29937981
Alignment:
| Q |
47 |
gtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt |
123 |
Q |
| |
|
|||||||||||||||| |||||| |||| |||||||| |||| ||||| |||| | |||||||||| |||||||| |
|
|
| T |
29937905 |
gtgagagaaactccaatttctctttaaactttctttctacttcgttcattgaggatgggtggttttagatcattttt |
29937981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 124
Target Start/End: Complemental strand, 8443789 - 8443743
Alignment:
| Q |
77 |
ttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
||||||||| ||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
8443789 |
ttctttctctttcattcatcaag-aggggtggttttaggtcatttttt |
8443743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 133
Target Start/End: Original strand, 8826033 - 8826084
Alignment:
| Q |
82 |
tctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||| |||| ||||| |||| | ||||||||||||||||||||||||||||| |
|
|
| T |
8826033 |
tctctttcactcatcgaggatgggtggttttaggtcattttttgatctagaa |
8826084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 41684221 - 41684300
Alignment:
| Q |
45 |
tagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
|||||||||||||||||||||| || | | ||||||||||||||||||| |||| |||||||||||||| ||||| |
|
|
| T |
41684221 |
tagtgagagaaactccaacttccctttaggctttctttctccttcattcataaagggtaagtggttttaggtcagttttt |
41684300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 116
Target Start/End: Complemental strand, 27498635 - 27498565
Alignment:
| Q |
46 |
agtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggt |
116 |
Q |
| |
|
||||||||||||| |||||| ||| || | |||||||||||||||||||| | |||| | |||||||||| |
|
|
| T |
27498635 |
agtgagagaaacttcaacttatctttaagctttctttctccttcattcatcgatgaggggcggttttaggt |
27498565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 36948742 - 36948688
Alignment:
| Q |
41 |
tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcat |
95 |
Q |
| |
|
|||||||||||| ||||| |||||||||| |||| |||||||||||| |||||| |
|
|
| T |
36948742 |
tttttagtgagacaaacttcaacttctctttaaactttctttctcctttattcat |
36948688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 41060534 - 41060482
Alignment:
| Q |
37 |
taattttttagtgagagaaactccaacttctctcaaaaccttctttctccttc |
89 |
Q |
| |
|
|||||||||||||||||||||| || | |||||| ||| ||||||||||||| |
|
|
| T |
41060534 |
taattttttagtgagagaaacttcatcatctctctaaaatttctttctccttc |
41060482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 67; Significance: 7e-30; HSPs: 21)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 12170265 - 12170383
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat |
127 |
Q |
| |
|
|||||| |||| |||| |||||||||||||||||||||||||| | || ||||||||||||| |||||| |||||| |||||||||||||||||||||| |
|
|
| T |
12170265 |
agccggccctagttttctagtgagagaaactccaacttctctctagactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgac |
12170364 |
T |
|
| Q |
128 |
ctagaactagccctctaca |
146 |
Q |
| |
|
|||||| | ||||||||| |
|
|
| T |
12170365 |
ctagaatcacccctctaca |
12170383 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 35 - 146
Target Start/End: Complemental strand, 33053481 - 33053370
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac |
134 |
Q |
| |
|
|||| |||| ||||| |||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||||||||||| |||||| |
|
|
| T |
33053481 |
cctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaat |
33053382 |
T |
|
| Q |
135 |
tagccctctaca |
146 |
Q |
| |
|
| ||||||||| |
|
|
| T |
33053381 |
catccctctaca |
33053370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 3913886 - 3913789
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||| |||| |||||||||||| |||||| |||||| |||||||||||||||||||||| |||||| |
|
|
| T |
3913886 |
cctagttttctagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggagg-gtggttttaggtcattttttgacctagaa |
3913789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 68320 - 68225
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt |
123 |
Q |
| |
|
|||||| |||| ||||||||| |||||||||||||||||||| |||| ||||||||||||| |||||| |||||| ||||||||||| |||||| |
|
|
| T |
68320 |
agccggccctagttttttagtaggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagggatggttttaggtaattttt |
68225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 24228024 - 24227936
Alignment:
| Q |
36 |
ctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
||||||||||| || | ||||||||||||| |||| || | || ||||| |||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
24228024 |
ctaattttttaatgggcgaaactccaacttttctccaagctttatttcttcttcattcatcaaggaggagtggttttaggtcatttttt |
24227936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 40 - 131
Target Start/End: Original strand, 605986 - 606077
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctag |
131 |
Q |
| |
|
|||| ||||| ||||||||||||||| |||| |||| ||||||||||||| |||||| |||||| ||| ||||| |||||||||||| |||| |
|
|
| T |
605986 |
ttttctagtgggagaaactccaacttttctctaaactttctttctccttcgttcatcgaggaggggtgattttatgtcattttttgacctag |
606077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 130
Target Start/End: Complemental strand, 29255755 - 29255660
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatcta |
130 |
Q |
| |
|
||||| ||| |||||||||||| ||||||||||||| |||| |||||||||||| |||||| | ||| |||||||||| |||||| ||||||||| |
|
|
| T |
29255755 |
cctaactttctagtgagagaaattccaacttctctccaaactctctttctccttcgttcatcgaagagatgtggttttatgtcattctttgatcta |
29255660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 29320173 - 29320064
Alignment:
| Q |
40 |
ttttttagtgagagaaactcc---aacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaacta |
136 |
Q |
| |
|
||||||| ||||||||||||| ||||||||| |||| ||||||||||||| |||||| |||| | ||||||||||||||| ||||||||||||| | |
|
|
| T |
29320173 |
ttttttaatgagagaaactcctccaacttctctttaaactttctttctccttcgttcatcgaggatgggtggttttaggtcatattttgatctagaatca |
29320074 |
T |
|
| Q |
137 |
gccctctaca |
146 |
Q |
| |
|
||||||||| |
|
|
| T |
29320073 |
cccctctaca |
29320064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 32328896 - 32328805
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
|||| |||| ||||||||||||||| |||||||||| | || ||||||||||||| |||||| |||||| ||||||||| |||| ||||||| |
|
|
| T |
32328896 |
cctagttttctagtgagagaaactctaacttctctctatactttctttctccttcgttcatcgaggaggggtggttttaagtcagtttttga |
32328805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 23128388 - 23128506
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat |
127 |
Q |
| |
|
||||||| ||| | || ||||| ||||||||| |||||||||| |||| ||||||||||||| ||||| |||||| | ||||||||||||||||||| |
|
|
| T |
23128388 |
agccggttctagtattctagtgggagaaactctaacttctctctaaactttctttctccttcgttcattgaggagggatagttttaggtcattttttgac |
23128487 |
T |
|
| Q |
128 |
ctagaactagccctctaca |
146 |
Q |
| |
|
|||||| | ||||||||| |
|
|
| T |
23128488 |
ctagaatcacccctctaca |
23128506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 9723687 - 9723602
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatca-aggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
|||| |||||| ||||||||||||||||||| |||| ||||||||| ||| ||||||| |||||| ||||||||||||| |||||| |
|
|
| T |
9723687 |
ttttctagtgaaagaaactccaacttctctctaaactttctttctcgttcgttcatcagaggaggggtggttttaggtcttttttt |
9723602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 146
Target Start/End: Original strand, 30894427 - 30894524
Alignment:
| Q |
48 |
tgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctaca |
146 |
Q |
| |
|
||||||||||| ||||||||||| |||| || |||||||||| || ||| |||||| |||||||||| ||||||||||| |||||| | ||||||||| |
|
|
| T |
30894427 |
tgagagaaacttcaacttctctctaaacttt-tttctccttcgttaatcgaggaggggtggttttagatcattttttgacctagaatcacccctctaca |
30894524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 97
Target Start/End: Complemental strand, 9721830 - 9721761
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatca |
97 |
Q |
| |
|
|||||| | ||||||| |||||||||||||||||||||||||| |||| ||||||||| ||| ||||||| |
|
|
| T |
9721830 |
agccggccataattttctagtgagagaaactccaacttctctctaaactttctttctcgttcgttcatca |
9721761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 130
Target Start/End: Complemental strand, 32192003 - 32191950
Alignment:
| Q |
77 |
ttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatcta |
130 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||||||||||| |||||||||||| |
|
|
| T |
32192003 |
ttctttctctttcattcatcaaggaggggtggttttaggtccttttttgatcta |
32191950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 133
Target Start/End: Original strand, 32059688 - 32059784
Alignment:
| Q |
37 |
taattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
||||||| |||||||||||| ||||| |||||| |||| ||||||||| |||||||||| |||| ||||||||| |||||| ||||| |||||| |
|
|
| T |
32059688 |
taattttctagtgagagaaattccaagttctctttaaacattctttctctttcattcatcgaggataggtggttttaagtcattgtttgacctagaa |
32059784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 41 - 124
Target Start/End: Complemental strand, 7515509 - 7515426
Alignment:
| Q |
41 |
tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
||||||| ||||||| |||||||||||||| |||| | ||||||| ||| |||||| |||||| |||||||||| | ||||||| |
|
|
| T |
7515509 |
tttttagagagagaagctccaacttctctctaaacttgctttctctttcgttcatcgaggaggggtggttttagattatttttt |
7515426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 9719693 - 9719643
Alignment:
| Q |
47 |
gtgagagaaactccaacttctctcaaaaccttctttctccttcattcatca |
97 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||||||||| ||| ||||||| |
|
|
| T |
9719693 |
gtgagagaaactccaacttctctctaaactttctttctcgttcgttcatca |
9719643 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 4010807 - 4010715
Alignment:
| Q |
41 |
tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||||||||||||||||| || |||||||| || |||||||||||| ||| || |||||| ||| ||||| ||||||||||| |||||| |
|
|
| T |
4010807 |
tttttagtgagagaaacttcatcttctctctaagttttctttctcctttatttattgaggaggagtgactttagatcattttttgacctagaa |
4010715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 146
Target Start/End: Original strand, 34018348 - 34018448
Alignment:
| Q |
46 |
agtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctac |
145 |
Q |
| |
|
|||||||||| || ||| || | || |||| ||||||||||||| |||||| |||| | |||||||||||||||||||| |||||| | |||||||| |
|
|
| T |
34018348 |
agtgagagaagcttcaatttttgtctaaactttctttctccttcgttcatcgaggatggaaggttttaggtcattttttgacctagaatcacccctctac |
34018447 |
T |
|
| Q |
146 |
a |
146 |
Q |
| |
|
| |
|
|
| T |
34018448 |
a |
34018448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 1523185 - 1523283
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
||||||||| ||||||||||||||| | ||||||| || || |||||| |||| ||| ||||||| ||| |||||||||| ||||||| |||||| |
|
|
| T |
1523185 |
cctaattttatagtgagagaaactctacattctctctaagttttatttctctttcacacatgaaggaggggtgattttaggtcaatttttgacctagaa |
1523283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 27097918 - 27097834
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
||||||||||||||||||| || ||||||| || ||||||||| |||| |||| |||| | ||||||||||||| |||||| |
|
|
| T |
27097918 |
ttttttagtgagagaaacttcacattctctctaagttttctttctctttcactcattcaggaagagtggttttaggtcttttttt |
27097834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 67; Significance: 7e-30; HSPs: 25)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 126
Target Start/End: Original strand, 7035996 - 7036094
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
|||||| |||| |||| ||||||||||||||| |||||||||| |||| |||||||||||||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
7035996 |
agccggccctagttttctagtgagagaaactcaaacttctctctaaactttctttctccttcattcatcaaggtggggtggttttaggtcattttttga |
7036094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 13006997 - 13007115
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat |
127 |
Q |
| |
|
|||||| |||| |||||||||| |||||||||||||||||||| |||| ||||||||||||| |||||| ||||| |||||||||||||||||||||| |
|
|
| T |
13006997 |
agccggccctagttttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagaggtggttttaggtcattttttgac |
13007096 |
T |
|
| Q |
128 |
ctagaactagccctctaca |
146 |
Q |
| |
|
|||||| | ||||||||| |
|
|
| T |
13007097 |
ctagaatcacccctctaca |
13007115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 38597566 - 38597684
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat |
127 |
Q |
| |
|
|||||| |||| |||| |||||||||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||| ||||||||| |
|
|
| T |
38597566 |
agccggccctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggttattttttgac |
38597665 |
T |
|
| Q |
128 |
ctagaactagccctctaca |
146 |
Q |
| |
|
|||||| | ||||||||| |
|
|
| T |
38597666 |
ctagaatcacccctctaca |
38597684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 6012446 - 6012360
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||| ||||||||||||| ||||| |||||| |||||||||||||||||||||| |
|
|
| T |
6012446 |
ttttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttga |
6012360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 45 - 126
Target Start/End: Original strand, 38007143 - 38007224
Alignment:
| Q |
45 |
tagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
||||||||||||||| | |||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||||||||||| |
|
|
| T |
38007143 |
tagtgagagaaactcaatcttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttga |
38007224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 25979933 - 25980024
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
|||| |||| ||||||| |||||||||||||||||| |||| ||||||||||||| |||||| |||| | ||||||| |||||||||||||| |
|
|
| T |
25979933 |
cctagttttctagtgagcgaaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggtggtttcaggtcattttttga |
25980024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 133
Target Start/End: Complemental strand, 26878380 - 26878294
Alignment:
| Q |
46 |
agtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
||||||||||||| ||||||||||| |||| |||||||||||||||||||| ||||| ||||||||| |||| |||||||||||||| |
|
|
| T |
26878380 |
agtgagagaaacttcaacttctctctaaactttctttctccttcattcatcgaggagaggtggttttatgtca-tttttgatctagaa |
26878294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 31392065 - 31391959
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc |
139 |
Q |
| |
|
|||| |||||||| ||| || |||||||||| |||| |||||||||| || |||||| |||||| |||||||||||||||||||||| |||||| | || |
|
|
| T |
31392065 |
ttttctagtgagaaaaattctaacttctctctaaactttctttctccatcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcaccc |
31391966 |
T |
|
| Q |
140 |
ctctaca |
146 |
Q |
| |
|
||||||| |
|
|
| T |
31391965 |
ctctaca |
31391959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 35 - 124
Target Start/End: Original strand, 26825204 - 26825293
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
|||| |||| ||||| |||||||||||| ||||||| |||| ||||||||||||| |||||| |||||| ||||||||||||| |||||| |
|
|
| T |
26825204 |
cctagttttctagtgggagaaactccaatttctctctaaactttctttctccttctttcatcgaggaggggtggttttaggtcttttttt |
26825293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 42 - 133
Target Start/End: Original strand, 34945204 - 34945295
Alignment:
| Q |
42 |
ttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||||||| |||||||||||| ||||||| |||| ||||||||||||| |||||| | || | ||||||||||||||||||||| |||||| |
|
|
| T |
34945204 |
ttttagtgggagaaactccaaattctctctaaactttctttctccttcgttcatcgaagaaggatggttttaggtcattttttgacctagaa |
34945295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 124
Target Start/End: Original strand, 15571261 - 15571350
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
|||| |||| ||||||||||||||| |||||||||| || | |||||||||||||||||||| ||||| |||||||| |||||||||| |
|
|
| T |
15571261 |
cctagttttctagtgagagaaactctaacttctctccaagctttctttctccttcattcatcgaggagaaatggttttatgtcatttttt |
15571350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 40 - 133
Target Start/End: Original strand, 7929979 - 7930068
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||| |||||||||||||||||| ||||||| |||| |||||||||| ||||||||||||| ||| |||||||||| ||||||| |||||| |
|
|
| T |
7929979 |
ttttctagtgagagaaactccaaattctctctaaactttctttctcc----ttcatcaaggaggggtgattttaggtcaatttttgacctagaa |
7930068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 51 - 146
Target Start/End: Complemental strand, 9114022 - 9113927
Alignment:
| Q |
51 |
gagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctaca |
146 |
Q |
| |
|
||||||||| |||||||||| |||| ||||||||| ||| |||||| |||||| ||| |||||||||||||||| | |||||| | ||||||||| |
|
|
| T |
9114022 |
gagaaactctaacttctctctaaactttctttctctttcgttcatcgaggaggggtgattttaggtcattttttaacctagaatcacccctctaca |
9113927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 11977250 - 11977171
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttag |
114 |
Q |
| |
|
|||| |||| ||||||||||||||| |||||||||| |||| ||||||||||||| |||||| || ||| |||||||||| |
|
|
| T |
11977250 |
cctagttttctagtgagagaaactctaacttctctctaaactttctttctccttcgttcatcgagaaggggtggttttag |
11977171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 6216676 - 6216761
Alignment:
| Q |
42 |
ttttagtgagagaaactccaa-cttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
|||||||||||||||||| || |||||||| |||| || |||||| ||| |||||| |||| | |||||||||||||||| ||||| |
|
|
| T |
6216676 |
ttttagtgagagaaactcaaaacttctctctaaactttatttctcattcgttcatcgaggatgggtggttttaggtcattctttga |
6216761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 24230107 - 24230018
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctc-aaaaccttctttctccttcattcatcaaggaggtgtggttttaggt |
116 |
Q |
| |
|
|||||| |||| |||| |||||||||||||||||||||||||| ||||| |||||| | |||| |||||| ||||| | |||||||||| |
|
|
| T |
24230107 |
agccggccctagttttctagtgagagaaactccaacttctctctaaaactttctttgttcttcgttcatcgaggagtggaggttttaggt |
24230018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 11074199 - 11074124
Alignment:
| Q |
49 |
gagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggag-gtgtggttttaggtcattttt |
123 |
Q |
| |
|
||||||||||||||||| |||| |||| |||||||||| || |||||| ||||| | |||||||||||| |||||| |
|
|
| T |
11074199 |
gagagaaactccaacttttctctaaactttctttctccctcgttcatcgaggagagggtggttttaggttattttt |
11074124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 14211009 - 14211106
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| || ||||| ||| |||| ||||| |||||| ||| |||||||||| ||||||| |||||| |
|
|
| T |
14211009 |
cctaattttttagtgagagaaactctgtcttctctctaagttttcttcctctttcactcatcgaggagg-gtgattttaggtcaatttttgacctagaa |
14211106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 39567071 - 39567169
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
||||||||||||||||||||||| || ||||||| || ||||| ||| |||| ||||| |||||| ||| |||||||||| ||||||| |||||| |
|
|
| T |
39567071 |
cctaattttttagtgagagaaacaccgtcttctctttaagttttcttcctctttcactcatcgaggaggggtgattttaggtcaatttttgacctagaa |
39567169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 95
Target Start/End: Original strand, 13421711 - 13421779
Alignment:
| Q |
28 |
agccggtcctaattttt-tagtgagagaaactccaacttctctcaaaaccttctttctccttcattcat |
95 |
Q |
| |
|
||||| ||||| ||||| |||||||||||||| |||||||||| |||| |||||||| |||||||||| |
|
|
| T |
13421711 |
agccgatcctagtttttctagtgagagaaacttcaacttctctttaaactttctttcttcttcattcat |
13421779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 133
Target Start/End: Original strand, 35850574 - 35850657
Alignment:
| Q |
49 |
gagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||||||| ||||| ||||||| |||| || |||||| ||| || ||| |||||| ||||||||||||| |||||||| |||||| |
|
|
| T |
35850574 |
gagagaaagtccaatttctctctaaactttatttctcattcgtttatcgaggaggggtggttttaggtc-ttttttgacctagaa |
35850657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 41630286 - 41630342
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcat |
91 |
Q |
| |
|
|||||||||| ||||||||||||| ||||||||||| || | ||||||||| ||||| |
|
|
| T |
41630286 |
cctaatttttcagtgagagaaacttcaacttctctctaagctttctttctcattcat |
41630342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 8985257 - 8985215
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctc |
70 |
Q |
| |
|
|||||| |||| |||||||||||||||||||||||||||||| |
|
|
| T |
8985257 |
agccggccctagctttttagtgagagaaactccaacttctctc |
8985215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 4770927 - 4770992
Alignment:
| Q |
49 |
gagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttag |
114 |
Q |
| |
|
||||||||||| |||||||||| |||| |||||||| |||| || ||| |||||| ||| |||||| |
|
|
| T |
4770927 |
gagagaaactctaacttctctctaaactttctttcttcttcgttaatcgaggaggggtgattttag |
4770992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 132
Target Start/End: Complemental strand, 28541219 - 28541122
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctaga |
132 |
Q |
| |
|
|||| |||||||||||||||||||| |||||||| || ||||| ||| |||| ||||| ||| || ||| |||||||||| ||||||| ||||| |
|
|
| T |
28541219 |
cctatttttttagtgagagaaactctttcttctctctaagttttcttcctctttcactcatcgaggtggggtgattttaggtcaatttttgacctaga |
28541122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 67; Significance: 7e-30; HSPs: 38)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 2520578 - 2520684
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc |
139 |
Q |
| |
|
|||| |||||||||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||||||||||| |||||| | || |
|
|
| T |
2520578 |
ttttctagtgagagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcaccc |
2520677 |
T |
|
| Q |
140 |
ctctaca |
146 |
Q |
| |
|
||||||| |
|
|
| T |
2520678 |
ctctaca |
2520684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 39 - 133
Target Start/End: Complemental strand, 26091222 - 26091128
Alignment:
| Q |
39 |
attttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| | ||| |||||||| ||||||||| |||||| |
|
|
| T |
26091222 |
attttttagtgagagaaactccaacttctctctaaaccttctttctccttcattcatcgaggatgagtgattttaggttattttttgacctagaa |
26091128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 28 - 133
Target Start/End: Complemental strand, 26633990 - 26633885
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat |
127 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||| |||| ||||| |||||| ||||| |||||||||||||||| |
|
|
| T |
26633990 |
agccggtcctagttttttagtgagagaaactccaacttctctctaaactttctttcttcttcgttcattgaggaggggtggtcttaggtcattttttgac |
26633891 |
T |
|
| Q |
128 |
ctagaa |
133 |
Q |
| |
|
|||||| |
|
|
| T |
26633890 |
ctagaa |
26633885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 22610972 - 22611068
Alignment:
| Q |
27 |
gagccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt |
123 |
Q |
| |
|
||||||| |||| |||||||||| |||||||||||||||||||| |||| ||||||||||||| ||| || |||||| ||||||||||||||||||| |
|
|
| T |
22610972 |
gagccggccctagttttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcgtcgaggaggggtggttttaggtcattttt |
22611068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 146
Target Start/End: Complemental strand, 4143067 - 4142956
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac |
134 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||||| |||| |||||||||||| |||||| |||||| |||||||||||||||||||||| |||||| |
|
|
| T |
4143067 |
cctagttttttagtgggagaaactccaacttctctataaactttctttctcctttgttcatcgaggaggggtggttttaggtcattttttgacctagaat |
4142968 |
T |
|
| Q |
135 |
tagccctctaca |
146 |
Q |
| |
|
| ||||||||| |
|
|
| T |
4142967 |
cacccctctaca |
4142956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 133
Target Start/End: Original strand, 10496143 - 10496236
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||| ||||||||||||||||||||||| || |||| ||||| ||||||| |||||| ||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
10496143 |
ttttctagtgagagaaactccaacttctttctaaactttcttactccttcgttcatcgaggaggtgtggttttaggtcaatttttgacctagaa |
10496236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 19853824 - 19853736
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt |
123 |
Q |
| |
|
|||| |||| ||||| |||||||||||||||||||| |||| ||||||| |||||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
19853824 |
cctagttttctagtgggagaaactccaacttctctctaaactttctttccccttcattcatcgaggaggggtggttttaggtcattttt |
19853736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 126
Target Start/End: Complemental strand, 22558772 - 22558687
Alignment:
| Q |
41 |
tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
||||||| |||||||||||||| ||||||| |||| ||||||||||||| ||||| |||||| |||||||||||||||||||||| |
|
|
| T |
22558772 |
tttttagagagagaaactccaatttctctctaaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttga |
22558687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 13633910 - 13633998
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt |
123 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||| |||| ||||||||||||| ||||| ||||| ||||||||||||||||||| |
|
|
| T |
13633910 |
cctagttttctagtgagagaaactccaacttctctctaaactttctttctccttcgctcatcgaggagtggtggttttaggtcattttt |
13633998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 56156870 - 56156782
Alignment:
| Q |
31 |
cggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcat |
119 |
Q |
| |
|
|||||||| ||||||| ||||||||||||||||||||||| |||| |||||||| ||| ||||||||||| | ||||||||||||||| |
|
|
| T |
56156870 |
cggtcctagttttttattgagagaaactccaacttctctctaaactttctttcttattcgttcatcaaggatgggtggttttaggtcat |
56156782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 53810824 - 53810915
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
|||| |||| ||||| ||||||||||| |||||||| |||| ||||| ||||||| |||||| |||||| |||||||||||||||||||||| |
|
|
| T |
53810824 |
cctagttttctagtgggagaaactccagcttctctctaaactttcttcctccttcgttcatcgaggaggggtggttttaggtcattttttga |
53810915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 133
Target Start/End: Original strand, 9178165 - 9178251
Alignment:
| Q |
47 |
gtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||||||||||| || ||||||| ||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||| |
|
|
| T |
9178165 |
gtgagagaaacttcagtttctctctaaaatttctttctccttcattcatcaaggaggggtggtcttaggtcattttttgacctagaa |
9178251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 40 - 126
Target Start/End: Original strand, 54021662 - 54021748
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
||||||||||||||||||| ||| ||||||| |||| |||||||| ||||||||||| ||| | |||||||||||||||||||||| |
|
|
| T |
54021662 |
ttttttagtgagagaaacttcaatttctctctaaactttctttcttcttcattcatcgagggagagtggttttaggtcattttttga |
54021748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 22300636 - 22300732
Alignment:
| Q |
30 |
ccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
|||| |||| |||||||| |||||||||||||||||||||| ||| || |||||| |||| || || |||||| |||||||||||||||||||||| |
|
|
| T |
22300636 |
ccggccctagttttttagagagagaaactccaacttctctctaaattttatttctctttcactcgtcgaggaggagtggttttaggtcattttttga |
22300732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 21 - 124
Target Start/End: Original strand, 5119120 - 5119223
Alignment:
| Q |
21 |
aatcttgagccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatt |
120 |
Q |
| |
|
||||||| | ||| |||| |||| |||||||| ||| | |||||||| || |||| || |||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
5119120 |
aatcttgtgtcggccctagttttctagtgagataaatttcaacttctttctaaactttatttctccttcattcatcaaggaggggtggttttatgtcatt |
5119219 |
T |
|
| Q |
121 |
tttt |
124 |
Q |
| |
|
|||| |
|
|
| T |
5119220 |
tttt |
5119223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 48257762 - 48257664
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||| |||| |||||||| |||||||||||||||| |||| ||||||||| ||| | |||| |||||| ||||||||| |||||||||||| |||||| |
|
|
| T |
48257762 |
cctagttttctagtgagaaaaactccaacttctctttaaactttctttctcattcgtacatcgaggaggggtggttttatgtcattttttgacctagaa |
48257664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 9165344 - 9165267
Alignment:
| Q |
47 |
gtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||||| ||| ||||||||| ||||| ||||||||||||||| |||| |
|
|
| T |
9165344 |
gtgagagaaactccaacttctctctaaactttctttttccatcattcatcgaggagaggtggttttaggtcatatttt |
9165267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 33920853 - 33920937
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
||||||||||||||||||| |||||| || | |||| |||||||| ||||||||||| || | | |||||||||||||||||||| |
|
|
| T |
33920853 |
ttttttagtgagagaaacttcaacttttccctaaactttctttcttcttcattcatcgagaatgggtggttttaggtcatttttt |
33920937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 123
Target Start/End: Complemental strand, 21686560 - 21686465
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt |
123 |
Q |
| |
|
||||| ||||| |||| |||||||||||||| |||||||||| |||| |||||||||||| |||||| |||||| ||||||| ||||| ||||| |
|
|
| T |
21686560 |
agccgatcctagttttctagtgagagaaactttaacttctctctaaactttctttctcctttgttcatcgaggaggggtggtttgaggtctttttt |
21686465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 35348102 - 35348200
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||| |||| |||||| |||||||||||||||||| |||| || |||||||||| ||||| ||||| ||| |||||||||||||||||| |||||| |
|
|
| T |
35348102 |
cctagttttctagtgaaagaaactccaacttctctttaaactttttttctccttcgctcatcgtggaggggtgattttaggtcattttttgacctagaa |
35348200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 21662276 - 21662371
Alignment:
| Q |
30 |
ccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
|||||| |||||||||||||| |||| ||||| || |||| ||| |||||||| ||||||||| | |||||| |||||||||||||||||||||| |
|
|
| T |
21662276 |
ccggtcataattttttagtgatagaatatccaatttttctctaaaatttctttcttcttcattca-cgaggaggggtggttttaggtcattttttga |
21662371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 126
Target Start/End: Original strand, 21671040 - 21671135
Alignment:
| Q |
30 |
ccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
|||||| |||||||||||||| |||| ||||| || |||| ||| |||||||| ||||||||| | |||||| |||||||||||||||||||||| |
|
|
| T |
21671040 |
ccggtcataattttttagtgatagaatatccaatttttctctaaaatttctttcttcttcattca-cgaggaggggtggttttaggtcattttttga |
21671135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 51024781 - 51024713
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatc |
96 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||||| | || ||||||||||||| |||||| |
|
|
| T |
51024781 |
agccggccctaattttccagtgagagaaactccaacttctctctatactttctttctccttcgttcatc |
51024713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 50 - 133
Target Start/End: Original strand, 43510010 - 43510093
Alignment:
| Q |
50 |
agagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
||||||||| |||||||||| |||| ||| ||||||||| |||||| | || | |||||||||||||||||||||| |||||| |
|
|
| T |
43510010 |
agagaaacttcaacttctctttaaactttcattctccttcgttcatcgaagaagggtggttttaggtcattttttgacctagaa |
43510093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 146
Target Start/End: Original strand, 45418319 - 45418433
Alignment:
| Q |
29 |
gccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatc |
128 |
Q |
| |
|
||||| |||| |||| ||| |||| ||||| ||||||||||| ||| || |||||||| |||||||| ||||| ||||||||||||||||||||| | |
|
|
| T |
45418319 |
gccggccctagttttctagcgagaaaaacttcaacttctctctaaaaattttttctcctccattcatcgaggag---tggttttaggtcattttttgacc |
45418415 |
T |
|
| Q |
129 |
tagaactagccctctaca |
146 |
Q |
| |
|
||||| | ||||||||| |
|
|
| T |
45418416 |
tagaatcatccctctaca |
45418433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 51888529 - 51888438
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
|||| ||||||| ||||||||||| |||||| |||| | ||||||||| |||| ||||| |||||| |||||||||||||||||||||| |
|
|
| T |
51888529 |
cctagttttttattgagagaaacttcaacttttctctacgttttctttctctttcactcatcgaggaggggtggttttaggtcattttttga |
51888438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 124
Target Start/End: Complemental strand, 36204689 - 36204604
Alignment:
| Q |
39 |
attttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
||||||||||||||| ||||||| |||||||| | ||||||||| |||| |||||||||| | ||||||||||||||||||| |
|
|
| T |
36204689 |
attttttagtgagaggaactccaccttctctctaggttttctttctctttcaatcatcaaggatggatggttttaggtcatttttt |
36204604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 29961246 - 29961151
Alignment:
| Q |
31 |
cggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
|||| |||| ||| || ||||||||||||||||||||||| |||| |||||| ||||| |||||| | |||| || |||||||| ||||||||| |
|
|
| T |
29961246 |
cggttctaactttctaatgagagaaactccaacttctctctaaactttctttttcctttgttcatcgaagagggatgattttaggttattttttga |
29961151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 123
Target Start/End: Original strand, 53443928 - 53444010
Alignment:
| Q |
41 |
tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt |
123 |
Q |
| |
|
|||||||||||| ||||| ||||||||||| |||| || |||||| ||| ||||| ||||| |||||||||||||||||| |
|
|
| T |
53443928 |
tttttagtgagataaacttcaacttctctctaaactttttttctctttcgttcattgaggagcgttggttttaggtcattttt |
53444010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 24099384 - 24099295
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
|||| |||| |||||| ||||||| || ||||||| |||| |||||||| || | |||||| ||||| |||||||||||||||||||| |
|
|
| T |
24099384 |
cctagttttctagtgaaagaaactttaaattctctctaaactttctttcttctacgttcatcgaggagaggtggttttaggtcatttttt |
24099295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 22039105 - 22039013
Alignment:
| Q |
41 |
tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
||||| |||||||||||| ||||| | ||||| ||||||||| |||| ||||| || ||| |||||||||||||| |||| ||||||||| |
|
|
| T |
22039105 |
ttttttgtgagagaaactttaacttttttcaaagttttctttctctttcactcatcgagcaggggtggttttaggtcaattttggatctagaa |
22039013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 27651744 - 27651840
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctag |
131 |
Q |
| |
|
|||||||||||||||||||||| || |||||||| ||| ||||| ||| |||| ||||| |||||| ||| | |||||||| ||||||| |||| |
|
|
| T |
27651744 |
cctaattttttagtgagagaaattctgtcttctctctaaattttcttcctctttcactcatcgaggaggggtgatgttaggtcaatttttgacctag |
27651840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 32766309 - 32766421
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctc-aaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||| |||| ||||| |||||||||||||||| || |||| || |||||||||| ||||| || || |||||||||||||||||||||| |||||| |
|
|
| T |
32766309 |
cctagttttctagtggaagaaactccaacttctttctaaaaaattttttctccttcgttcattgagagggggtggttttaggtcattttttgacctagaa |
32766408 |
T |
|
| Q |
134 |
ctagccctctaca |
146 |
Q |
| |
|
| ||||||||| |
|
|
| T |
32766409 |
tcacccctctaca |
32766421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 114
Target Start/End: Complemental strand, 1621805 - 1621719
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttag |
114 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| |||||||| || ||||| ||| |||| ||||| |||||| ||| |||||| |
|
|
| T |
1621805 |
agccggccctaattttttagtgagagaaactctgtcttctctctaagttttcttcctctttcactcatcgaggaggcgtgattttag |
1621719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 70
Target Start/End: Original strand, 9643178 - 9643208
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctc |
70 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
9643178 |
ttttttagtgagagaaactccaacttctctc |
9643208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 47320709 - 47320623
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
||||||||||||||||||| |||||||||| || ||| ||||| ||| ||||| || ||| |||||||||||||||| ||||| |
|
|
| T |
47320709 |
ttttttagtgagagaaacttcaacttctctttaagttttccttctctttcgctcatcgagaaggggtggttttaggtcattctttga |
47320623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 124
Target Start/End: Original strand, 9713697 - 9713786
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
|||| |||||||||||||||||||| | |||||||| || |||||||| |||| ||||| |||||| ||| ||||| ||| |||||| |
|
|
| T |
9713697 |
cctagttttttagtgagagaaactctaccttctctctaagttctctttctctttcactcatcgaggaggggtgattttatgtcttttttt |
9713786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 133
Target Start/End: Original strand, 18935576 - 18935681
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat |
127 |
Q |
| |
|
|||||| ||||| ||||||||||||||||||| |||||||| || ||||| ||| ||| ||||| |||||| ||| ||| |||||| ||||||| |
|
|
| T |
18935576 |
agccggccctaagtttttagtgagagaaactctgtcttctctctaagttttcttcctctttcgctcatcgaggaggggtgatttaaggtcaatttttgac |
18935675 |
T |
|
| Q |
128 |
ctagaa |
133 |
Q |
| |
|
|||||| |
|
|
| T |
18935676 |
ctagaa |
18935681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 67; Significance: 7e-30; HSPs: 34)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 4778532 - 4778650
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat |
127 |
Q |
| |
|
|||||| |||| |||||||||| ||||||||||||||||| || |||| ||||||||||||| |||||| |||||| |||||||||||||||||||||| |
|
|
| T |
4778532 |
agccggccctagttttttagtgggagaaactccaacttctttctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgac |
4778631 |
T |
|
| Q |
128 |
ctagaactagccctctaca |
146 |
Q |
| |
|
|||||| | ||||||||| |
|
|
| T |
4778632 |
ctagaatcacccctctaca |
4778650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 7646258 - 7646369
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac |
134 |
Q |
| |
|
|||| |||| ||||| |||||||||||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||||||||||| |||||| |
|
|
| T |
7646258 |
cctagttttctagtgggagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaat |
7646357 |
T |
|
| Q |
135 |
tagccctctaca |
146 |
Q |
| |
|
| ||||||||| |
|
|
| T |
7646358 |
cacccctctaca |
7646369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 12677616 - 12677498
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat |
127 |
Q |
| |
|
|||||| |||| |||| |||||||||||||||||||||||||| |||| |||||||||||| |||||| |||||| || |||| |||||||||||||| |
|
|
| T |
12677616 |
agccggccctagttttctagtgagagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggtagtttaaggtcattttttgac |
12677517 |
T |
|
| Q |
128 |
ctagaactagccctctaca |
146 |
Q |
| |
|
|||||| | ||||||||| |
|
|
| T |
12677516 |
ctagaatcacccctctaca |
12677498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 7678181 - 7678080
Alignment:
| Q |
45 |
tagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctcta |
144 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||||||||||| || ||| | |||| |||||||||||||||||||||| |||||| | ||||||| |
|
|
| T |
7678181 |
tagtgagagaaactccaacttctctctaaactttctttctccttcgttgatcgatgaggggtggttttaggtcattttttgacctagaatcacccctcta |
7678082 |
T |
|
| Q |
145 |
ca |
146 |
Q |
| |
|
|| |
|
|
| T |
7678081 |
ca |
7678080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 133
Target Start/End: Complemental strand, 27097725 - 27097620
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat |
127 |
Q |
| |
|
|||||| |||| |||| ||||| ||||||||||||||||||| |||| ||||||||||||| |||||| |||||| ||| |||||||||||||||||| |
|
|
| T |
27097725 |
agccggccctagttttctagtggaagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtgattttaggtcattttttgac |
27097626 |
T |
|
| Q |
128 |
ctagaa |
133 |
Q |
| |
|
|||||| |
|
|
| T |
27097625 |
ctagaa |
27097620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 1421462 - 1421546
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
|||| |||||||||||||||||||||||| | |||| ||||||||||||| |||||| |||||| |||||||||||||||||||| |
|
|
| T |
1421462 |
ttttctagtgagagaaactccaacttctcgctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcatttttt |
1421546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 7448034 - 7448145
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac |
134 |
Q |
| |
|
|||| |||| ||||| |||||||||||||||||||| |||| |||||| |||||| |||||| |||||| ||||||||||||||||||||| |||||| |
|
|
| T |
7448034 |
cctagttttctagtgggagaaactccaacttctctctaaactttctttttccttcgttcatcgaggaggggtggttttaggtcattttttgtcctagaat |
7448133 |
T |
|
| Q |
135 |
tagccctctaca |
146 |
Q |
| |
|
| ||||||||| |
|
|
| T |
7448134 |
cacccctctaca |
7448145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 31788242 - 31788353
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac |
134 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| |||| |||||||| |||| |||||| ||||| | |||||||||| ||||||||| |||||| |
|
|
| T |
31788242 |
cctaattttctagtgagagaaactccaacttctctctaaactttctttcttcttcgttcatcgaggagaggcggttttaggtaattttttgacctagaat |
31788341 |
T |
|
| Q |
135 |
tagccctctaca |
146 |
Q |
| |
|
| ||||||||| |
|
|
| T |
31788342 |
cacccctctaca |
31788353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 28 - 133
Target Start/End: Original strand, 35220110 - 35220212
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat |
127 |
Q |
| |
|
|||||| |||| |||| ||||||||||||||||||| |||||| |||| |||||||||||||||||||| |||| |||||||||||| ||||||||| |
|
|
| T |
35220110 |
agccggccctagttttctagtgagagaaactccaacctctctctaaactttctttctccttcattcatc---gaggggtggttttaggttattttttgac |
35220206 |
T |
|
| Q |
128 |
ctagaa |
133 |
Q |
| |
|
|||||| |
|
|
| T |
35220207 |
ctagaa |
35220212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 4098889 - 4098987
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||||| |||| ||||||||| ||| |||||| |||| | |||| ||||||||||||||||| |||||| |
|
|
| T |
4098889 |
cctagttttttagtgggagaaactccaacttctctctaaactttctttctctttccttcatcgaggaagggtggctttaggtcattttttgacctagaa |
4098987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 36943437 - 36943339
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||| |||| |||||||||||||||||| || |||| |||| ||||||||||||| || ||| |||||| |||||||||||||||||||||| |||||| |
|
|
| T |
36943437 |
cctagttttctagtgagagaaactccaatttatctctaaactttctttctccttcgttgatcgaggaggggtggttttaggtcattttttgacctagaa |
36943339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 133
Target Start/End: Complemental strand, 43397439 - 43397334
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat |
127 |
Q |
| |
|
|||||| |||| |||| ||||||||||||||||||||||||| |||| |||||| | |||| |||||| || ||| |||||||||||||||||||||| |
|
|
| T |
43397439 |
agccggccctagttttctagtgagagaaactccaacttctctttaaactttcttttttcttcgttcatcgagaaggggtggttttaggtcattttttgac |
43397340 |
T |
|
| Q |
128 |
ctagaa |
133 |
Q |
| |
|
|||||| |
|
|
| T |
43397339 |
ctagaa |
43397334 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 146
Target Start/End: Original strand, 18763265 - 18763365
Alignment:
| Q |
46 |
agtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctac |
145 |
Q |
| |
|
||||||||||||||||||||||||| |||| ||||||| ||||||| |||| ||||| ||||||||| |||||||||||| |||||| | |||||||| |
|
|
| T |
18763265 |
agtgagagaaactccaacttctctctaaactttctttcaccttcatccatcgaggagaggtggttttatgtcattttttgacctagaatcacccctctac |
18763364 |
T |
|
| Q |
146 |
a |
146 |
Q |
| |
|
| |
|
|
| T |
18763365 |
a |
18763365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 43 - 132
Target Start/End: Complemental strand, 5428173 - 5428084
Alignment:
| Q |
43 |
tttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctaga |
132 |
Q |
| |
|
||||| |||||||||||||||||||||| ||| ||||||||||||| |||||| |||||| |||||||||||| | ||||||| ||||| |
|
|
| T |
5428173 |
tttagagagagaaactccaacttctctctaaattttctttctccttcgttcatcgaggaggggtggttttaggttaatttttgacctaga |
5428084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 123
Target Start/End: Complemental strand, 9169566 - 9169482
Alignment:
| Q |
39 |
attttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt |
123 |
Q |
| |
|
||||| ||||| |||||||||||||||||||| |||| ||||||||| ||| || ||| |||||| ||||||||||||||||||| |
|
|
| T |
9169566 |
attttctagtgggagaaactccaacttctctctaaactttctttctcattcgtttatcgaggaggggtggttttaggtcattttt |
9169482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 146
Target Start/End: Complemental strand, 11985543 - 11985432
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac |
134 |
Q |
| |
|
|||| |||| || ||||||||||||||||||||||| |||| ||||||||| ||||||| || ||||| ||||||||| |||||||||| | |||||| |
|
|
| T |
11985543 |
cctagttttctaatgagagaaactccaacttctctctaaactttctttctctttcattcttcgaggagtggtggttttaagtcattttttaacctagaat |
11985444 |
T |
|
| Q |
135 |
tagccctctaca |
146 |
Q |
| |
|
| ||||||||| |
|
|
| T |
11985443 |
cacccctctaca |
11985432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 31129056 - 31128974
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttt |
122 |
Q |
| |
|
||||||||||||| ||||| ||||||||||| |||| ||||||||||||| || ||| |||||| ||| |||||||||||||| |
|
|
| T |
31129056 |
ttttttagtgagaaaaacttcaacttctctctaaactttctttctccttcgttgatcgaggaggggtgattttaggtcatttt |
31128974 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 53 - 133
Target Start/End: Complemental strand, 37876893 - 37876813
Alignment:
| Q |
53 |
gaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||| ||||||||||||| |||| |||||||| |||| |||||| |||||| |||||||||||||| ||||||| |||||| |
|
|
| T |
37876893 |
gaaattccaacttctctctaaactttctttcttcttcgttcatcgaggaggggtggttttaggtcaatttttgacctagaa |
37876813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 29279883 - 29279794
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttg |
125 |
Q |
| |
|
||||||||| | |||||||||||||||||||||||| || | |||||||| ||||||||||| |||| | | | ||||||||||||||||| |
|
|
| T |
29279883 |
cctaattttcttgtgagagaaactccaacttctctctaacctttctttct-cttcattcatcgaggatgagcgattttaggtcattttttg |
29279794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 95
Target Start/End: Complemental strand, 42698987 - 42698928
Alignment:
| Q |
36 |
ctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcat |
95 |
Q |
| |
|
||||||||||||||||||||||| |||||||| || |||| |||||||||||| |||||| |
|
|
| T |
42698987 |
ctaattttttagtgagagaaacttcaacttctttctaaactttctttctcctttattcat |
42698928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 127
Target Start/End: Original strand, 41694407 - 41694493
Alignment:
| Q |
41 |
tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat |
127 |
Q |
| |
|
|||||||| ||||||||| || |||||||| || | |||| ||||||||| ||||| || || ||| |||||||||||||||||||| |
|
|
| T |
41694407 |
tttttagtaagagaaacttcaccttctctctaagctttctctctccttcactcatcgagaagatgtagttttaggtcattttttgat |
41694493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 133
Target Start/End: Original strand, 24461238 - 24461323
Alignment:
| Q |
48 |
tgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||| |||||||||||||||||| || || ||||| |||| |||| ||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
24461238 |
tgagtgaaactccaacttctctctaagtttttattctctttcactcattaaggaggggtggttttaggtcattttttgacctagaa |
24461323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 8809073 - 8809156
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt |
123 |
Q |
| |
|
||||||||| ||||||||| |||||||||| |||| ||||||||||||||| | || |||| |||||||||| |||||||| |
|
|
| T |
8809073 |
ttttttagtaggagaaactctaacttctctctaaactttctttctccttcatacgtcgaggacaggtggttttagatcattttt |
8809156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 114
Target Start/End: Original strand, 36691657 - 36691732
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaactt-ctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttag |
114 |
Q |
| |
|
|||| ||||||||||||||||||||| || || |||||||||||||||||| || || |||||| |||||||||| |
|
|
| T |
36691657 |
ttttctagtgagagaaactccaactttctttctaaaccttctttctccttccttaattgaggaggggtggttttag |
36691732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 4904444 - 4904358
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
||||||||| ||||||||| ||||||||||| |||| ||||||||| ||| || || | ||| ||||||||| |||||||||||| |
|
|
| T |
4904444 |
ttttttagtaagagaaacttcaacttctctctaaactttctttctcattcgtttattgaagagtggtggttttatgtcattttttga |
4904358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 28 - 70
Target Start/End: Complemental strand, 23933911 - 23933869
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctc |
70 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
23933911 |
agccggtcctaattttttagtgagagtaactccaccttctctc |
23933869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 32448929 - 32448843
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||| || || || |||| ||||| |||||| |||||||||||||||| ||||| |
|
|
| T |
32448929 |
ttttttagtgagagaaactctaacttctctttaaatttttcttttctttcactcatcgaggaggggtggttttaggtcattatttga |
32448843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 36175712 - 36175666
Alignment:
| Q |
77 |
ttctttctccttcattcatcaaggaggtgtggttttaggtcattttt |
123 |
Q |
| |
|
||||||||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
36175712 |
ttctttctccttcattcatcaagaagaggtggttttaggtcattttt |
36175666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 146
Target Start/End: Original strand, 38444982 - 38445063
Alignment:
| Q |
64 |
ttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctaca |
146 |
Q |
| |
|
||||||| |||| ||||||||||||| |||||| | ||| |||||||||||||| |||||||||||||| | ||||||||| |
|
|
| T |
38444982 |
ttctctctaaactttctttctccttcgttcatcgatgagaggtggttttaggtca-tttttgatctagaatcacccctctaca |
38445063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 124
Target Start/End: Complemental strand, 28872069 - 28871987
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
|||||||||||||||||||||| ||||||| || || |||||| |||||||||| |||| | ||||||||||||| |||||| |
|
|
| T |
28872069 |
ttttttagtgagagaaactccacattctctctaat--ttttttctcattcattcatcgaggatgagtggttttaggtcttttttt |
28871987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 123
Target Start/End: Original strand, 37416493 - 37416576
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt |
123 |
Q |
| |
|
||||||| ||||||||||| ||||||||||| ||| || ||| || ||||||| || | |||| ||| ||||||||||||||| |
|
|
| T |
37416493 |
ttttttaatgagagaaacttcaacttctctctaaattttttttatctttcattcgtcgatgaggggtgattttaggtcattttt |
37416576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 133
Target Start/End: Complemental strand, 18108044 - 18107951
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
||||| ||| ||||||| |||| ||||||| || ||||||||| ||||||||| |||| |||||||||||||||||||||| |||||| |
|
|
| T |
18108044 |
tttttaagtaagagaaagtccactttctctctaagttttctttctctttcattcattgaggaatggtggttttaggtcattttttgacctagaa |
18107951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 124
Target Start/End: Complemental strand, 25509379 - 25509291
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
||||||||| |||||||| |||||| ||||| |||| || | |||||||| |||| |||||| |||| ||||||||||||| |||||| |
|
|
| T |
25509379 |
cctaattttctagtgagaaaaactcaaacttttctctaa-ctttctttcttcttcgttcatcgaggaatggtggttttaggtcttttttt |
25509291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 4042278 - 4042230
Alignment:
| Q |
47 |
gtgagagaaactccaacttctctcaaaaccttctttctccttcattcat |
95 |
Q |
| |
|
|||||||||||||||||||||||| |||| || |||||| ||| ||||| |
|
|
| T |
4042278 |
gtgagagaaactccaacttctctctaaactttttttctcattccttcat |
4042230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0127 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0127
Description:
Target: scaffold0127; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 15261 - 15379
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat |
127 |
Q |
| |
|
|||||| |||| |||| |||||||||||||| ||||||||||| |||| ||||||||||||| ||| || |||||| |||||||||||||||||||||| |
|
|
| T |
15261 |
agccggccctagttttctagtgagagaaacttcaacttctctctaaactttctttctccttcgttcttcgaggaggggtggttttaggtcattttttgac |
15360 |
T |
|
| Q |
128 |
ctagaactagccctctaca |
146 |
Q |
| |
|
|||||| | ||||||||| |
|
|
| T |
15361 |
ctagaatcacccctctaca |
15379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 26)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 19405062 - 19404956
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc |
139 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| || ||| |||||||||||||||||||||| |||||| | || |
|
|
| T |
19405062 |
ttttttagtgagagaaactccaacttctctctaaatcttctttctccttaattcattgagaaggggtggttttaggtcattttttgacctagaatcaccc |
19404963 |
T |
|
| Q |
140 |
ctctaca |
146 |
Q |
| |
|
||||||| |
|
|
| T |
19404962 |
ctctaca |
19404956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 40 - 133
Target Start/End: Original strand, 42978391 - 42978484
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||| ||||||||||||||| |||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||||||||||| |||||| |
|
|
| T |
42978391 |
ttttctagtgagagaaactctaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaa |
42978484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 9450450 - 9450352
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| | |||| ||||||||||||| |||||| |||||| ||||||||||||||||||||| |||||| |
|
|
| T |
9450450 |
cctaattttctagtgagagaaactccaacttctttttaaactttctttctccttcgttcatcgaggagggatggttttaggtcattttttgacctagaa |
9450352 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 126
Target Start/End: Complemental strand, 12141615 - 12141530
Alignment:
| Q |
41 |
tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
||||||| |||||||||||||||||||||| |||| ||||||||||||| |||||| | |||| |||||||||||||||||||||| |
|
|
| T |
12141615 |
tttttagagagagaaactccaacttctctctaaactttctttctccttcgttcatcgaagaggggtggttttaggtcattttttga |
12141530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 35 - 146
Target Start/End: Complemental strand, 8013778 - 8013667
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac |
134 |
Q |
| |
|
|||| ||||||||||||||||||| ||||||||||| |||| |||||||| ||| |||||| |||||| |||||||||| ||||||||||| |||||| |
|
|
| T |
8013778 |
cctagttttttagtgagagaaacttcaacttctctctaaactttctttcttctttgttcatcgaggaggggtggttttagatcattttttgacctagaat |
8013679 |
T |
|
| Q |
135 |
tagccctctaca |
146 |
Q |
| |
|
| ||||||||| |
|
|
| T |
8013678 |
cacccctctaca |
8013667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 48 - 146
Target Start/End: Complemental strand, 37837758 - 37837660
Alignment:
| Q |
48 |
tgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctaca |
146 |
Q |
| |
|
||||||||||||||||||||||| |||| || |||||||||| ||||| |||||| |||||||||||||||||||||| |||||| | ||||||||| |
|
|
| T |
37837758 |
tgagagaaactccaacttctctctaaactttatttctccttcgttcattgaggaggggtggttttaggtcattttttgacctagaatcacccctctaca |
37837660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 30757134 - 30757021
Alignment:
| Q |
33 |
gtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctaga |
132 |
Q |
| |
|
|||||| |||||||||| |||||||| ||||||||||| ||| ||||||||| ||| |||||| |||||| |||||||||||| ||||||||| ||||| |
|
|
| T |
30757134 |
gtcctagttttttagtgggagaaacttcaacttctctctaaattttctttctctttcgttcatcgaggaggggtggttttaggtaattttttgacctaga |
30757035 |
T |
|
| Q |
133 |
actagccctctaca |
146 |
Q |
| |
|
| | ||||||||| |
|
|
| T |
30757034 |
atcacccctctaca |
30757021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 126
Target Start/End: Original strand, 48061206 - 48061291
Alignment:
| Q |
41 |
tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
||||||| |||||||||||||||||||||| |||| |||||| |||||| |||||| ||||| |||||||||||||||||||||| |
|
|
| T |
48061206 |
tttttagagagagaaactccaacttctctctaaactttctttatccttcgttcatcgaggagaggtggttttaggtcattttttga |
48061291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 34899912 - 34899809
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagcc |
139 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||| ||||||||||||| |||| | || | |||||||||||||||||||||| |||||| | || |
|
|
| T |
34899912 |
ttttttagtgggagaaactccaacttctctctaaactttctttctccttcgttcacc---gatgagtggttttaggtcattttttgacctagaatcaccc |
34899816 |
T |
|
| Q |
140 |
ctctaca |
146 |
Q |
| |
|
||||||| |
|
|
| T |
34899815 |
ctctaca |
34899809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 146
Target Start/End: Complemental strand, 48317114 - 48317014
Alignment:
| Q |
46 |
agtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccctctac |
145 |
Q |
| |
|
||||| |||||||| |||||||||| ||| | ||||||||||| ||||||||||||| ||||||||||||||||||| || |||||| | |||||||| |
|
|
| T |
48317114 |
agtgaaagaaactctaacttctctctaaatttgctttctccttcgttcatcaaggaggggtggttttaggtcatttttggacctagaatcacccctctac |
48317015 |
T |
|
| Q |
146 |
a |
146 |
Q |
| |
|
| |
|
|
| T |
48317014 |
a |
48317014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 4529857 - 4529948
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
|||| |||| |||||||||||||| || |||||||| || ||||||||||||||||||||||| ||| ||| |||||||||||||||||| |
|
|
| T |
4529857 |
cctagttttctagtgagagaaacttcaccttctctctaagtcttctttctccttcattcatcaaagagaggtgattttaggtcattttttga |
4529948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 19296656 - 19296767
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac |
134 |
Q |
| |
|
|||| |||||||||| |||||||||||||||| ||| || || ||| |||||| |||||| |||||| |||||||||||||||||||||| |||||| |
|
|
| T |
19296656 |
cctagttttttagtgggagaaactccaacttccctctaatttttttttgtccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaat |
19296755 |
T |
|
| Q |
135 |
tagccctctaca |
146 |
Q |
| |
|
| ||||||||| |
|
|
| T |
19296756 |
cacccctctaca |
19296767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 146
Target Start/End: Complemental strand, 39171905 - 39171794
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaac |
134 |
Q |
| |
|
|||| |||| |||||||| |||||||||| | |||| |||| |||||||| |||| |||||| |||||| |||||| ||||||||||||||| |||||| |
|
|
| T |
39171905 |
cctagttttctagtgagataaactccaacgtatctctaaactttctttcttcttcgttcatcgaggaggggtggttgtaggtcattttttgacctagaat |
39171806 |
T |
|
| Q |
135 |
tagccctctaca |
146 |
Q |
| |
|
| ||||||||| |
|
|
| T |
39171805 |
cacccctctaca |
39171794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 123
Target Start/End: Original strand, 47590085 - 47590180
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt |
123 |
Q |
| |
|
||||||||| | ||||||||||||||||| ||||||||||||| ||| ||||||||| ||| ||||| |||||| ||| ||||||||||||||| |
|
|
| T |
47590085 |
agccggtccaagttttttagtgagagaaattccaacttctctctaaattttctttctcattcgttcatagaggaggggtgattttaggtcattttt |
47590180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 28 - 146
Target Start/End: Complemental strand, 13797251 - 13797133
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat |
127 |
Q |
| |
|
||||||||||| |||| |||||||||||||| |||||||||| ||| ||||||||| ||| |||||| |||| | ||||||||||||||||||| | |
|
|
| T |
13797251 |
agccggtcctagttttctagtgagagaaacttcaacttctctttaaattttctttctcgttcgttcatcgaggatggatggttttaggtcattttttaac |
13797152 |
T |
|
| Q |
128 |
ctagaactagccctctaca |
146 |
Q |
| |
|
|||||| | ||||||||| |
|
|
| T |
13797151 |
ctagaatcacccctctaca |
13797133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 39329113 - 39329017
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||| ||||| | || |||| |||||||||||| |||||| |||||| |||| |||||||| |||||| |
|
|
| T |
39329113 |
agccggccctaattttctagtgagagaaactcaaacttttttctaaactttctttctcctttgttcatcgaggaggagtgggtttaggtcttttttt |
39329017 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 126
Target Start/End: Complemental strand, 25287498 - 25287403
Alignment:
| Q |
31 |
cggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||| || | ||| ||||||||| || ||| ||||| |
|
|
| T |
25287498 |
cggtcctaattttttagtgagagaaactataacttctctataaattttctttctccttcattcgtcgaagagaggtggttttaagttattatttga |
25287403 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 133
Target Start/End: Complemental strand, 5078702 - 5078608
Alignment:
| Q |
39 |
attttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| || ||||| || |||| |||| ||||| | ||| |||||||||||||||||| |||||| |
|
|
| T |
5078702 |
attttttagtgagagaaacttcaacttctctctaagttctctttatctttcactcattaaggaagggtgattttaggtcattttttgacctagaa |
5078608 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 40992960 - 40993050
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
|||| |||| ||||| |||||||||||||||||||| |||| || |||| |||| |||||| |||| | || ||||||||||||||||||| |
|
|
| T |
40992960 |
cctagttttctagtgggagaaactccaacttctctctaaactttagttcttcttcgttcatcgaggatg-gtagttttaggtcattttttga |
40993050 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 123
Target Start/End: Complemental strand, 3224725 - 3224642
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt |
123 |
Q |
| |
|
||||||||||||||||| |||||||| | || ||| ||||||||| |||| || || | || | ||||||||||||||||||| |
|
|
| T |
3224725 |
ttttttagtgagagaaattccaacttttttctaaattttctttctctttcactcttcgaagatgggtggttttaggtcattttt |
3224642 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 45350500 - 45350445
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcat |
95 |
Q |
| |
|
|||| |||||||||||||| ||||||||||| |||| || |||||||||| ||||| |
|
|
| T |
45350500 |
ttttctagtgagagaaacttcaacttctctctaaactttttttctccttcgttcat |
45350445 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 9915941 - 9916011
Alignment:
| Q |
54 |
aaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||| || ||| |||||| | ||||||||| |||||| |
|
|
| T |
9915941 |
aaactccaacttctctccaaactttctttctccttcgtttatcgaggagggttaattttaggtcttttttt |
9916011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 9923853 - 9923923
Alignment:
| Q |
54 |
aaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||||| || ||| |||||| | ||||||||| |||||| |
|
|
| T |
9923853 |
aaactccaacttctctccaaactttctttctccttcgtttatcgaggagggttaattttaggtcttttttt |
9923923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 24350695 - 24350737
Alignment:
| Q |
28 |
agccggtcctaatttt-ttagtgagagaaactccaacttctct |
69 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||||||||||||| |
|
|
| T |
24350695 |
agccggccctaatttttttagtgagagaaactccaacttctct |
24350737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 122
Target Start/End: Original strand, 24770055 - 24770120
Alignment:
| Q |
57 |
ctccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttt |
122 |
Q |
| |
|
|||||||||||||| |||| ||||||||| ||| |||||| || || ||| |||||||||||||| |
|
|
| T |
24770055 |
ctccaacttctctctaaactttctttctcattcgttcatcgagacggggtgattttaggtcatttt |
24770120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 133
Target Start/End: Original strand, 22087137 - 22087193
Alignment:
| Q |
77 |
ttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||||||||||||||| ||| | |||| ||||||| ||||||||||||| |||||| |
|
|
| T |
22087137 |
ttctttctccttcatttatcgaagagggatggtttttggtcattttttgacctagaa |
22087193 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0884 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0884
Description:
Target: scaffold0884; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 41 - 146
Target Start/End: Complemental strand, 2279 - 2174
Alignment:
| Q |
41 |
tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaactagccc |
140 |
Q |
| |
|
||||||| |||||||||||||||||||||| |||| || |||||||||| |||||| |||||| ||||||||| ||||||||||||||||||| | ||| |
|
|
| T |
2279 |
tttttagagagagaaactccaacttctctctaaactttttttctccttcgttcatcgaggaggagtggttttaagtcattttttgatctagaatcacccc |
2180 |
T |
|
| Q |
141 |
tctaca |
146 |
Q |
| |
|
|||||| |
|
|
| T |
2179 |
tctaca |
2174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 28 - 133
Target Start/End: Complemental strand, 72184 - 72079
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat |
127 |
Q |
| |
|
|||||| |||| |||| ||||| |||||||| ||||||||||| |||| ||||||||||||| |||||| |||||| |||||||||||||||||||||| |
|
|
| T |
72184 |
agccggccctagttttctagtgggagaaacttcaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgac |
72085 |
T |
|
| Q |
128 |
ctagaa |
133 |
Q |
| |
|
|||||| |
|
|
| T |
72084 |
ctagaa |
72079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0445 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0445
Description:
Target: scaffold0445; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 1120 - 1218
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||| |||||||||||| |||||| ||||||||||| ||| ||||||||||||| |||||| ||||| |||||||||||||||||||||| |||||| |
|
|
| T |
1120 |
cctagttttttagtgagtgaaacttcaacttctctctaaattttctttctccttcgttcatcgaggagaggtggttttaggtcattttttgacctagaa |
1218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0219 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0219
Description:
Target: scaffold0219; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 133
Target Start/End: Complemental strand, 15141 - 15053
Alignment:
| Q |
45 |
tagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
|||||||||||||||||| ||||||| |||| |||||||||||||||||||| |||| |||||| |||||| ||||||||| |||||| |
|
|
| T |
15141 |
tagtgagagaaactccaatttctctctaaactttctttctccttcattcatcgaggatgtgtggggttaggttattttttgacctagaa |
15053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0017
Description:
Target: scaffold0017; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 33061 - 32970
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
|||| |||| ||||||||||||||| |||||||||| |||| |||||||| |||| || ||| |||||| |||||||||||||||||||||| |
|
|
| T |
33061 |
cctagttttctagtgagagaaactctaacttctctctaaactttctttcttcttcgtttatcgaggaggagtggttttaggtcattttttga |
32970 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0088 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0088
Description:
Target: scaffold0088; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 146
Target Start/End: Original strand, 50555 - 50673
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgat |
127 |
Q |
| |
|
|||||| |||| |||| ||||| ||||||||||||||||| || |||| ||||||||||||| ||||| |||||| ||| |||||||||| ||||||| |
|
|
| T |
50555 |
agccggccctagttttctagtgggagaaactccaacttctttctaaactttctttctccttcgttcattgaggaggggtgattttaggtcactttttgac |
50654 |
T |
|
| Q |
128 |
ctagaactagccctctaca |
146 |
Q |
| |
|
|||||| | ||||||||| |
|
|
| T |
50655 |
ctagaatcatccctctaca |
50673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0262 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0262
Description:
Target: scaffold0262; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 2121 - 2041
Alignment:
| Q |
44 |
ttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttttt |
124 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||||||| |||||||||| ||||| |||| ||||||||| |||||| |
|
|
| T |
2121 |
ttagtgagagaaactccaacttctttcaaaactttctttcttcttcattcattgaggagatgtgtttttaggtcttttttt |
2041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0064 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0064
Description:
Target: scaffold0064; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 19348 - 19261
Alignment:
| Q |
35 |
cctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttt |
123 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| || ||||||||| |||| ||||| |||||| ||||||||| ||| ||||| |
|
|
| T |
19348 |
cctaattttttagtgagagaaactccaacttctctc-taattttctttctctttcactcatcgaggaggggtggttttatgtcgttttt |
19261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0009
Description:
Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 126
Target Start/End: Complemental strand, 58387 - 58301
Alignment:
| Q |
40 |
ttttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
||||||||||||||||||||||||||||||| || ||| || || |||| || || |||||| |||||||||||||||||||||| |
|
|
| T |
58387 |
ttttttagtgagagaaactccaacttctctctaagttttcgttttctttcactcgtcgaggaggggtggttttaggtcattttttga |
58301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0603 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0603
Description:
Target: scaffold0603; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 7500 - 7591
Alignment:
| Q |
41 |
tttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
||||||||||| |||||||| |||||||| || |||||||||||| ||||||| |||||| ||||||||||||||||||||| |||||| |
|
|
| T |
7500 |
tttttagtgagggaaactccg-cttctctctaagttttctttctcctttattcatcgaggagggatggttttaggtcattttttgacctagaa |
7591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0554 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0554
Description:
Target: scaffold0554; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 10672 - 10742
Alignment:
| Q |
52 |
agaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcatttt |
122 |
Q |
| |
|
|||||||| |||||||||| |||| | ||| |||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
10672 |
agaaactctaacttctctctaaacttgcttcctccttcattcatcgaggagaggtggttttaggtcatttt |
10742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0087 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0087
Description:
Target: scaffold0087; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 126
Target Start/End: Complemental strand, 25649 - 25551
Alignment:
| Q |
28 |
agccggtcctaattttttagtgagagaaactccaacttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttga |
126 |
Q |
| |
|
|||||| |||| |||| |||||||||||||| |||||| |||| ||| |||||||||| |||||| |||||| ||||||||| |||||||||||| |
|
|
| T |
25649 |
agccggccctagttttctagtgagagaaacttcaacttttctctaaaaaaattttctccttcgttcatcgaggaggggtggttttatgtcattttttga |
25551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0492 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0492
Description:
Target: scaffold0492; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 133
Target Start/End: Original strand, 12721 - 12790
Alignment:
| Q |
64 |
ttctctcaaaaccttctttctccttcattcatcaaggaggtgtggttttaggtcattttttgatctagaa |
133 |
Q |
| |
|
||||||| ||| ||||||||| || ||||||||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
12721 |
ttctctcttaactttctttctctttgattcatcaaggagaggtggttttaggtcattttttgacctagaa |
12790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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