View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8924_low_49 (Length: 263)
Name: NF8924_low_49
Description: NF8924
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8924_low_49 |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 45696879 - 45696637
Alignment:
| Q |
1 |
atacacataaaaaattacttataaatgaaagataaacgagtaaaaaccgtatcgttaagtctttttagattgtaaaactgtaaaatcaatctagaactag |
100 |
Q |
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| T |
45696879 |
atacacataaaaaattactcataaatgaaagataaacgagaaaaaaccgtgtcgttaagtttttttggattgtaaaactgtaaaatcaatctagaactag |
45696780 |
T |
|
| Q |
101 |
aacttatatcattaagattgaagaactaattttcaa-caagtaacgaaaacgacatcttatctcgacatgatatttggacgattgcatatgtacatgtga |
199 |
Q |
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||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45696779 |
aacctatatcattaagattgaagaactaattttcaaccaagtaacgaaaacgacatcttatctcgacatgatatttggacgattgcatatgtacatgtga |
45696680 |
T |
|
| Q |
200 |
cgtgctaaccaacaaatagtaagcaatatgctcatgttacaag |
242 |
Q |
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| T |
45696679 |
cgtgctaaccaacaaatagtaagcaatatgctcatgttacaag |
45696637 |
T |
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