View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8926_low_75 (Length: 228)
Name: NF8926_low_75
Description: NF8926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8926_low_75 |
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Alignment Details
Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 26599813 - 26599607
Alignment:
| Q |
18 |
ttctctacctcctaaattcttcaaagcttccattaaagcagcatcccttgcttcaatccatgctctctcattactccaaaacttttgttctttttctacc |
117 |
Q |
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| T |
26599813 |
ttctctacctcctaaattcttcaaagcttccattaaagcagcatcccttgcttcaatccatgctctctcattactccaaaacttttgttctttttctacc |
26599714 |
T |
|
| Q |
118 |
cttttggcctcttgtttcctccactcttcttctcttaacgccctctccttttccttatcctcaagtgttttcacaagcttactcaaccactcctctctgc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
26599713 |
cttttggcctcttgtttcctccactcttcttctcttaacgccctctccttttccttatcctcaagtgttttcacaagcttactcaaccactcctct-tgc |
26599615 |
T |
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| Q |
218 |
ttctccac |
225 |
Q |
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|||||||| |
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| T |
26599614 |
ttctccac |
26599607 |
T |
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