View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8926_low_78 (Length: 213)
Name: NF8926_low_78
Description: NF8926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8926_low_78 |
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Alignment Details
Target: chr8 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 16 - 189
Target Start/End: Original strand, 7863672 - 7863845
Alignment:
| Q |
16 |
atactccaagggatatgcctaaaaccaatggaaaaagggaaagacaagcgccggcaaacattcccataactaggcctgaaattagcatcataaactctgg |
115 |
Q |
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| T |
7863672 |
atactccaagggatatgcctaaaaccaatggaaaaagggaaagacaagcgccggcaaacattcccataactaggcctgaaattagcatcataaactccgg |
7863771 |
T |
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| Q |
116 |
cttttgcaatttccatacctcagaaagtttgtaatttcttgactttttatattttttatcttcaatatcttctt |
189 |
Q |
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| T |
7863772 |
cttttgcaatttccatacctcagaaagtttgtaatttcttgactttttatattttttatcttcaatatcttctt |
7863845 |
T |
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