View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8929_high_9 (Length: 275)
Name: NF8929_high_9
Description: NF8929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8929_high_9 |
 |  |
|
| [»] chr1 (1 HSPs) |
 |  |
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Alignment Details
Target: chr1 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 1717262 - 1717536
Alignment:
| Q |
1 |
tttcttgctacttggttgtcggtttatgtttttcctcataaagctttggtgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatccta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1717262 |
tttcttgctacttggttgtcggtttatgtttttcctcataaagctttggtgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatccta |
1717361 |
T |
 |
| Q |
101 |
ttgctttggcaccggctgttttagctagcatatataaggatttaactttgtttaagaaaacaatagttggtttgtcaaaatatcctgttggtggcgatag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1717362 |
ttgctttggcaccggctgttttagctagcatatataaggatttaactttgtttaagaaaacaatagttggtttgtcaaaatatcctgttggtggcgatag |
1717461 |
T |
 |
| Q |
201 |
attttctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgttgggaaggttcaaaagttt |
275 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1717462 |
attttctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgttgggaaggttcaaaagttt |
1717536 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 152; Significance: 1e-80; HSPs: 22)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 19812328 - 19812598
Alignment:
| Q |
1 |
tttcttgctacttggttgtcggtttatgtttttcctcataaagctttggtgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatccta |
100 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||||||||||| |||||||||||| ||||||||||| || ||| ||| |||||||||||| |||||| |
|
|
| T |
19812328 |
tttcttgctacttggttgtcaatttttgtttttcctcataaatatttggtgaaaaagtctttgtttccgatcgctattcttcttgctagagggtatccta |
19812427 |
T |
 |
| Q |
101 |
ttgctttggcaccggctgttttagctagcatatataaggatttaactttgtttaagaaaacaatagttggtttgtcaaaatatcctgttggtggcgatag |
200 |
Q |
| |
|
||||||||||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||| |||| |||||||||||||||||||||||| ||||| |
|
|
| T |
19812428 |
ttgctttggcaccagctgtcttggctagcatatataaagatttaagtttgtttaagaaaacaattgttgatttgtcaaaatatcctgttggtggtgatag |
19812527 |
T |
 |
| Q |
201 |
attttctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgttggga-aggttcaaaa |
271 |
Q |
| |
|
|||| | |||| ||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||| |
|
|
| T |
19812528 |
atttcccttggagattactcttcaatcacccttttacttggttcaaatttgggt-ttgggagaggttcaaaa |
19812598 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 19956132 - 19956405
Alignment:
| Q |
1 |
tttcttgctacttggttgtcggtttatgtttttcctcataaag---ctttggtgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatc |
97 |
Q |
| |
|
|||||||||||||||||||| ||| |||||| ||||||||| ||| ||||||| | |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
19956132 |
tttcttgctacttggttgtcaatttttgttttccctcataaatattcttccgtgaaaagttatttgtttcctattgttgttcatcttgctagaggaaatc |
19956231 |
T |
 |
| Q |
98 |
ctattgctttggcaccggctgttttagctagcatatataaggatttaactttgtttaagaaaacaatagttggtttgtcaaaatatcctgttggtggcga |
197 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| || ||||| |||||||||||||||||| ||||| || |
|
|
| T |
19956232 |
ctattgctttggcaccagctgttttagctagcatatataaggatttaactttgttaaagaaaaaaacagttgatttgtcaaaatatcctgtgggtggtga |
19956331 |
T |
 |
| Q |
198 |
tagattttctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgttgggaaggttcaaaa |
271 |
Q |
| |
|
||||| | || || ||| |||||||||||||||||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
19956332 |
tagatatccttcagaacttactcttcaatcacccttttacttggttcaaatttgggtgtgggaaaggttcaaaa |
19956405 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 11 - 256
Target Start/End: Original strand, 26653210 - 26653455
Alignment:
| Q |
11 |
cttggttgtcggtttatgtttttcctcataaagctttggtgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatcctattgctttggc |
110 |
Q |
| |
|
|||||||||| ||| |||||||||||||| || || ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26653210 |
cttggttgtcaatttttgtttttcctcatatagaattagtgaaaagttctttgttttctattgctgttcatcttgctagaggaaatcctattgctttggc |
26653309 |
T |
 |
| Q |
111 |
accggctgttttagctagcatatataaggatttaactttgtttaagaaaacaatagttggtttgtcaaaatatcctgttggtggcgatagattttctaag |
210 |
Q |
| |
|
||| |||||||||||||| ||||||||||| || |||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||| || | |
|
|
| T |
26653310 |
accagctgttttagctagtatatataaggacttgactttgtttaagaaaacaattgttggtttgtcaaaatattatgttggtggtgatagatttcctttg |
26653409 |
T |
 |
| Q |
211 |
gaggttagtcttcaatcacccttttacttggttcaaatttgggtgt |
256 |
Q |
| |
|
|| |||| ||| | |||||||||||||||||||||||||||||||| |
|
|
| T |
26653410 |
gaagttaatctacgatcacccttttacttggttcaaatttgggtgt |
26653455 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 8 - 271
Target Start/End: Original strand, 26647059 - 26647322
Alignment:
| Q |
8 |
ctacttggttgtcggtttatgtttttcctcataaagctttggtgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatcctattgcttt |
107 |
Q |
| |
|
||||||||||||| |||||||||||||||||| | ||||||||||| | ||||||||||||||||||||||||||||||||| ||||| |||||||| |
|
|
| T |
26647059 |
ctacttggttgtcagtttatgtttttcctcatctaaatttggtgaaaagttgtttgtttcctattgctgttcatcttgctagagggaatccaattgcttt |
26647158 |
T |
 |
| Q |
108 |
ggcaccggctgttttagctagcatatataaggatttaactttgtttaagaaaacaatagttggtttgtcaaaatatcctgttggtggcgatagattttct |
207 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||| |||||||||||||||| | |||| |||| |||| | ||| |||||| ||||||| | || |
|
|
| T |
26647159 |
ggcaccggctgttttagctagcttatataaggatttaagtttgtttaagaaaacacttgttgatttgaaaaaaatttctgatggtggtgatagatatcct |
26647258 |
T |
 |
| Q |
208 |
aaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgttgggaaggttcaaaa |
271 |
Q |
| |
|
||| |||| |||||||||||||||||||||||||||||||||||||| || ||||||||||| |
|
|
| T |
26647259 |
ttggaagttactcttcaatcacccttttacttggttcaaatttgggtgtgggaaaggttcaaaa |
26647322 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 271
Target Start/End: Complemental strand, 20036673 - 20036400
Alignment:
| Q |
1 |
tttcttgctacttggttgtcggtttatgtttttcctcataaagc---tttggtgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatc |
97 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
20036673 |
tttcttgctacttggttgtcactttttgtttttcctcataaaaactatttggtgaaaagttctttgtttcctattgctgtatatcttgctagaggaaatc |
20036574 |
T |
 |
| Q |
98 |
ctattgctttggcaccggctgttttagctagcatatataaggatttaactttgtttaagaaaacaatagttggtttgtcaaaatatcctgttggtggcga |
197 |
Q |
| |
|
||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||| || ||||||||| || |
|
|
| T |
20036573 |
gtattgctttagcacctgctgttttagctagtctatataaggatttaactttgtttaagaaaacaattgttgatttgtcaaaatgtcatgttggtggtga |
20036474 |
T |
 |
| Q |
198 |
tagattttctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgttgggaaggttcaaaa |
271 |
Q |
| |
|
|||| || || || |||| |||| ||||||||||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
20036473 |
tagacttcctttagaagttactcttgaatcacccttttacttggttcaaatttgggtgtgggagaggttcaaaa |
20036400 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 19818605 - 19818875
Alignment:
| Q |
1 |
tttcttgctacttggttgtcggtttatgtttttcctcataaagctttggtgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatccta |
100 |
Q |
| |
|
||||||||||||||||| || ||| ||||||||||||||| |||||||||||| | | |||||||| |||||||| ||||||||||||| ||||||| |
|
|
| T |
19818605 |
tttcttgctacttggttatcaatttttgtttttcctcataagaatttggtgaaaaattatctgtttcctgttgctgttaatcttgctagagggaatccta |
19818704 |
T |
 |
| Q |
101 |
ttgctttggcaccggctgttttagctagcatatataaggatttaactttgtttaagaaaacaatagttggtttgtcaaaatatcctgttggtggcgatag |
200 |
Q |
| |
|
|||||||||||||||||||||| |||| ||| ||||| ||||||| |||||||||||||| |||||||| ||||||||||||| |||||||||| ||||| |
|
|
| T |
19818705 |
ttgctttggcaccggctgttttggctaacatttataaagatttaagtttgtttaagaaaaaaatagttgatttgtcaaaatattctgttggtggtgatag |
19818804 |
T |
 |
| Q |
201 |
attttctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgttgggaaggttcaaaa |
271 |
Q |
| |
|
|||| || || ||| |||||||||||||||||| ||||||||||| ||||||| || |||||||||| |
|
|
| T |
19818805 |
atttcctttagaacttactcttcaatcacccttttatttggttcaaatatgggtgtgggagaggttcaaaa |
19818875 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 271
Target Start/End: Original strand, 19849038 - 19849311
Alignment:
| Q |
1 |
tttcttgctacttggttgtcggtttatgtttttcctcataaagc---tttggtgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatc |
97 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
19849038 |
tttcttgctacttggttgtcactttttgtttttcctcataaaaactatttggtgaaaagttctttgtttcctattgctgtatatcttgctagaggaaatc |
19849137 |
T |
 |
| Q |
98 |
ctattgctttggcaccggctgttttagctagcatatataaggatttaactttgtttaagaaaacaatagttggtttgtcaaaatatcctgttggtggcga |
197 |
Q |
| |
|
||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| || ||||||||| || |
|
|
| T |
19849138 |
gtattgctttagcacctgctgttttagctagtctatataaggatttaactttgtttaagaaaacaatcactgatttgtcaaaatgtcatgttggtggtga |
19849237 |
T |
 |
| Q |
198 |
tagattttctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgttgggaaggttcaaaa |
271 |
Q |
| |
|
||||||| | |||| ||| |||| ||||||||||||| ||||||||||||||||||| || |||||||||| |
|
|
| T |
19849238 |
tagatttcccttggagattactcttaaatcacccttttatttggttcaaatttgggtgtgggagaggttcaaaa |
19849311 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 60 - 271
Target Start/End: Original strand, 19838503 - 19838714
Alignment:
| Q |
60 |
tttgtttcctattgctgttcatcttgctagaggaaatcctattgctttggcaccggctgttttagctagcatatataaggatttaactttgtttaagaaa |
159 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
19838503 |
tttgtttccaattgttgttcatcttgctagaggaaattctattgctttggcaccagctgttttagctagcatatataatgatttaactttgttaaagaaa |
19838602 |
T |
 |
| Q |
160 |
acaatagttggtttgtcaaaatatcctgttggtggcgatagattttctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgttgg |
259 |
Q |
| |
|
| || ||||| |||||||||| ||||||||||| | |||| || | || || |||| |||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
19838603 |
aaaacagttgatttgtcaaaacatcctgttggttgtgatacatatcctttagaagttactcttcaatcacccttttacttggttcaaatttgggtgtggg |
19838702 |
T |
 |
| Q |
260 |
gaaggttcaaaa |
271 |
Q |
| |
|
|||||||||| |
|
|
| T |
19838703 |
agaggttcaaaa |
19838714 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 67 - 252
Target Start/End: Original strand, 19951238 - 19951423
Alignment:
| Q |
67 |
cctattgctgttcatcttgctagaggaaatcctattgctttggcaccggctgttttagctagcatatataaggatttaactttgtttaagaaaacaatag |
166 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| |||| | |
|
|
| T |
19951238 |
cctattgctattcatcttgctagaggaaatcctattgctttggctccagctgttttagctagcatatataaggatttaactttgtttaaaaaagcaattg |
19951337 |
T |
 |
| Q |
167 |
ttggtttgtcaaaatatcctgttggtggcgatagattttctaaggaggttagtcttcaatcacccttttacttggttcaaatttgg |
252 |
Q |
| |
|
||| |||||||||||||| ||| ||||| ||||||| | || || ||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
19951338 |
ttgatttgtcaaaatatcatgtgggtggtgatagatatcctttagaacttactcttcaatcacccttttacttggttcaaatttgg |
19951423 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 271
Target Start/End: Complemental strand, 20016271 - 20015998
Alignment:
| Q |
1 |
tttcttgctacttggttgtcggtttatgtttttcctcataaag---ctttggtgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatc |
97 |
Q |
| |
|
||||||||||||||| |||| ||| |||||| ||||||||| ||| ||||||| | ||||||||| |||||| |||||||||||||| |||||| |
|
|
| T |
20016271 |
tttcttgctacttggctgtcaatttttgttttccctcataaatactcttccgtgaaaagttgtttgtttccgattgctattcatcttgctagacgaaatc |
20016172 |
T |
 |
| Q |
98 |
ctattgctttggcaccggctgttttagctagcatatataaggatttaactttgtttaagaaaacaatagttggtttgtcaaaatatcctgttggtggcga |
197 |
Q |
| |
|
|||||||||||||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||| |||| |||||||||||||| ||| ||||| || |
|
|
| T |
20016171 |
ctattgctttggcaccagctgtcttggctagcatatataaagatttaagtttgtttaagaaaacaattgttgatttgtcaaaatatcatgtgggtggtga |
20016072 |
T |
 |
| Q |
198 |
tagattttctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgttgggaaggttcaaaa |
271 |
Q |
| |
|
||| | | || || |||| |||||||||||| |||| ||||||||||||||||||| || |||||||||| |
|
|
| T |
20016071 |
taggtatcctttagaagttacacttcaatcacccatttatttggttcaaatttgggtgtgggagaggttcaaaa |
20015998 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 8 - 256
Target Start/End: Original strand, 20046178 - 20046426
Alignment:
| Q |
8 |
ctacttggttgtcggtttatgtttttcctcataaagctttggtgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatcctattgcttt |
107 |
Q |
| |
|
||||||||||||| ||| |||||||||||||||| | |||||||||| | ||||||| |||||||| || ||||||||||||||||||| |||||||| |
|
|
| T |
20046178 |
ctacttggttgtcaatttttgtttttcctcataaaaatatggtgaaaaattgtttgttttctattgctattaatcttgctagaggaaatccaattgcttt |
20046277 |
T |
 |
| Q |
108 |
ggcaccggctgttttagctagcatatataaggatttaactttgtttaagaaaacaatagttggtttgtcaaaatatcctgttggtggcgatagattttct |
207 |
Q |
| |
|
|||||| |||||||| | |||||||||||||||||||| ||| |||||||| ||||| ||| | ||| ||||||||| |||||||| ||||||||| || |
|
|
| T |
20046278 |
ggcacctgctgttttgggtagcatatataaggatttaagtttatttaagaacacaattattgatctgttaaaatatccggttggtggtgatagatttcct |
20046377 |
T |
 |
| Q |
208 |
aaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgt |
256 |
Q |
| |
|
|| ||| | ||| |||||||||||| ||||||||| ||||||||| |
|
|
| T |
20046378 |
gttgaatttactattctatcacccttttatttggttcaagtttgggtgt |
20046426 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 8 - 254
Target Start/End: Original strand, 30914698 - 30914947
Alignment:
| Q |
8 |
ctacttggttgtcggtttatgtttttcctcataaagctttggtgaaaaaatctttgtttcctattgc---tgttcatcttgctagaggaaatcctattgc |
104 |
Q |
| |
|
||||||||||||| ||| |||||| ||||| |||| ||||||||||| | ||||||||||||||| | |||||||||||||||| || | |||| |
|
|
| T |
30914698 |
ctacttggttgtcaatttttgttttccctcacaaagatttggtgaaaagttttttgtttcctattgcgcctattcatcttgctagagggaacattgttgc |
30914797 |
T |
 |
| Q |
105 |
tttggcaccggctgttttagctagcatatataaggatttaactttgtttaagaaaacaatagttggtttgtcaaaatatcctgttggtggcgatagattt |
204 |
Q |
| |
|
|| ||||| || ||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||| | |
|
|
| T |
30914798 |
attagcaccaaaaaaattggctagcatatacaaagatttaagtttgtttaagaaaacaatagttggtttgtcaaaatatcaagttggtggtgatagatgt |
30914897 |
T |
 |
| Q |
205 |
tctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggt |
254 |
Q |
| |
|
||| |||||||| |||||| ||||||||| ||||||| ||||||||||| |
|
|
| T |
30914898 |
cctatggaggttactcttcactcaccctttgacttggtacaaatttgggt |
30914947 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 19853560 - 19853731
Alignment:
| Q |
1 |
tttcttgctacttggttgtcggtttatgtttttcctcataaag-ctttg--gtgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatc |
97 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||||||||| | |||| ||||||| ||||||||||||||||||| ||| |||||||||||| ||| |
|
|
| T |
19853560 |
tttcttgctacttggttgtctatttttgtttttcctcatagatactttattgtgaaaagatctttgtttcctattgctattcgtcttgctagaggtaata |
19853659 |
T |
 |
| Q |
98 |
ctattgctttggcaccggctgttttagctagcatatataaggatttaactttgtttaagaaaacaatagttg |
169 |
Q |
| |
|
|||||||||||||||| |||||||| |||||| ||||||| ||||| | |||||||||||||| ||| |||| |
|
|
| T |
19853660 |
ctattgctttggcacctgctgttttggctagcttatataacgatttgagtttgtttaagaaaaaaattgttg |
19853731 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 58 - 271
Target Start/End: Original strand, 19989630 - 19989843
Alignment:
| Q |
58 |
tctttgtttcctattgctgttcatcttgctagaggaaatcctattgctttggcaccggctgttttagctagcatatataaggatttaactttgtttaaga |
157 |
Q |
| |
|
||||| |||| | ||||| |||||||||||||||||||||||||||| || ||||| || ||||| ||||| | |||||||||||| ||| |||||| |
|
|
| T |
19989630 |
tctttctttcgtgttgctattcatcttgctagaggaaatcctattgcattagcacctgcagttttggctagtttgtataaggatttaggtttacttaaga |
19989729 |
T |
 |
| Q |
158 |
aaacaatagttggtttgtcaaaatatcctgttggtggcgatagattttctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgtt |
257 |
Q |
| |
|
| | | ||||| |||||||||| |||||||||||| |||||| || | | ||||| || |||||||||||||||||||||||||||| ||||||| || |
|
|
| T |
19989730 |
acatattagttaatttgtcaaaacttcctgttggtggtgatagacttcccatggaggctattcttcaatcacccttttacttggttcaagtttgggt-tt |
19989828 |
T |
 |
| Q |
258 |
ggga-aggttcaaaa |
271 |
Q |
| |
|
|||| |||||||||| |
|
|
| T |
19989829 |
gggagaggttcaaaa |
19989843 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 24840044 - 24839873
Alignment:
| Q |
1 |
tttcttgctacttggttgtcggtttatgtttttcctcataaag---ctttggtgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatc |
97 |
Q |
| |
|
|||||||||||||||||||| ||| |||||| ||||||||| || | |||||| |||||||||||| ||||||||||||| |||||||| |||| |
|
|
| T |
24840044 |
tttcttgctacttggttgtcaatttttgttttccctcataaatactctctagtgaaatgttctttgtttcctgttgctgttcatctagctagagggaatc |
24839945 |
T |
 |
| Q |
98 |
ctattgctttggcaccggctgttttagctagcatatataaggatttaactttgtttaagaaaacaatagttg |
169 |
Q |
| |
|
||||| |||||||||| |||||||| |||||| ||||||| ||||||| ||||||||||| ||||| |||| |
|
|
| T |
24839944 |
ctatttctttggcacctgctgttttggctagcttatataacgatttaaggttgtttaagaacacaattgttg |
24839873 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 19858120 - 19858281
Alignment:
| Q |
1 |
tttcttgctacttggttgtcggtttatgtttttcctcataaag-ctttg--gtgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatc |
97 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||||| ||| | |||| ||||||| ||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
19858120 |
tttcttgctacttggttgtcaatttttgtttttcctaatagatactttaatgtgaaaagatctttgtttcctattgctattggtcttgctagaggaaata |
19858219 |
T |
 |
| Q |
98 |
ctattgctttggcaccggctgttttagctagcatatataaggatttaactttgtttaagaaa |
159 |
Q |
| |
|
|||| ||||||||||| |||||||| |||||| ||||||| ||||| | ||||||||||||| |
|
|
| T |
19858220 |
ctatcgctttggcacctgctgttttggctagcttatataacgatttgagtttgtttaagaaa |
19858281 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 62 - 159
Target Start/End: Original strand, 19943828 - 19943925
Alignment:
| Q |
62 |
tgtttcctattgctgttcatcttgctagaggaaatcctattgctttggcaccggctgttttagctagcatatataaggatttaactttgtttaagaaa |
159 |
Q |
| |
|
||||||||||||||||||||||||||||||| | |||||| ||||||||||| |||||||| |||||| ||||||||||||| | ||||||||||||| |
|
|
| T |
19943828 |
tgtttcctattgctgttcatcttgctagagggattcctatggctttggcacctgctgttttggctagcttatataaggatttgagtttgtttaagaaa |
19943925 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 49 - 187
Target Start/End: Original strand, 19971710 - 19971848
Alignment:
| Q |
49 |
gtgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatcctattgctttggcaccggctgttttagctagcatatataaggatttaactt |
148 |
Q |
| |
|
||||||| |||||||||||||||||| ||||| | | |||||| ||| |||||||||||||||| ||||||| |||||| |||||||||||| |||| |
|
|
| T |
19971710 |
gtgaaaagttctttgtttcctattgctattcatttggttagaggcaatactattgctttggcaccaactgttttggctagcttatataaggattgaactc |
19971809 |
T |
 |
| Q |
149 |
tgtttaagaaaacaatagttggtttgtcaaaatatcctg |
187 |
Q |
| |
|
||||||||||| ||| |||| |||| ||||||||||| |
|
|
| T |
19971810 |
tgtttaagaaacaaattgttgatttgaaaaaatatcctg |
19971848 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 19832133 - 19832190
Alignment:
| Q |
214 |
gttagtcttcaatcacccttttacttggttcaaatttgggtgttgggaaggttcaaaa |
271 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
19832133 |
gttactcttcaatcacccttttacttggttcaaatttgggtgtgggagaggttcaaaa |
19832190 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 271
Target Start/End: Original strand, 17114900 - 17115034
Alignment:
| Q |
137 |
aggatttaactttgtttaagaaaacaatagttggtttgtcaaaatatcctgttggtggcgatagattttctaaggaggttagtcttcaatcaccctttta |
236 |
Q |
| |
|
||||||| ||||||||||||||||| || ||| |||||||||| |||||||| ||| ||||||||| || || ||| || || | |||||||| |
|
|
| T |
17114900 |
aggatttgactttgtttaagaaaactattattgatttgtcaaaaaatcctgtttatggtgatagatttcctttagaagttgctcgtcgaatgccctttta |
17114999 |
T |
 |
| Q |
237 |
cttggttcaaatttgggtgttgggaaggttcaaaa |
271 |
Q |
| |
|
|||||||||||||||| ||| || |||||||||| |
|
|
| T |
17115000 |
cttggttcaaatttggatgtgggagaggttcaaaa |
17115034 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 19943987 - 19944035
Alignment:
| Q |
223 |
caatcacccttttacttggttcaaatttgggtgttgggaaggttcaaaa |
271 |
Q |
| |
|
||||||||||||||| |||||||| ||||||| | || ||||||||||| |
|
|
| T |
19943987 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaa |
19944035 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 24839822 - 24839774
Alignment:
| Q |
223 |
caatcacccttttacttggttcaaatttgggtgttgggaaggttcaaaa |
271 |
Q |
| |
|
||||||||||||||| |||||||| ||||||| | || ||||||||||| |
|
|
| T |
24839822 |
caatcacccttttacctggttcaagtttgggtttgggaaaggttcaaaa |
24839774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 5 - 256
Target Start/End: Original strand, 9815089 - 9815340
Alignment:
| Q |
5 |
ttgctacttggttgtcggtttatgtttttcctcataaagctttggtgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatcctattgc |
104 |
Q |
| |
|
||||||| |||||||| | | |||||| |||||||| |||||||||||| ||||||||| |||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
9815089 |
ttgctacgtggttgtcaatctttgttttaactcataaatctttggtgaaaagttctttgttttctattgctattcatcttgctagaggaaattctattgc |
9815188 |
T |
 |
| Q |
105 |
tttggcaccggctgttttagctagcatatataaggatttaactttgtttaagaaaacaatagttggtttgtcaaaatatcctgttggtggcgatagattt |
204 |
Q |
| |
|
||||||||| |||||||||||||| || ||||| ||||||| |||||||||||||||||||||| ||||||||||| |||||||||| ||||||| | |
|
|
| T |
9815189 |
tttggcaccagctgttttagctagtatttataacgatttaagtttgtttaagaaaacaatagttaatttgtcaaaattatctgttggtggtgatagatat |
9815288 |
T |
 |
| Q |
205 |
tctaaggaggttagtcttcaatcacccttttacttggttcaaatttgggtgt |
256 |
Q |
| |
|
|| || |||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9815289 |
cctttagaagttactcttcaatcacccttttacttggttcaaatttgggtgt |
9815340 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 46 - 271
Target Start/End: Complemental strand, 26354949 - 26354724
Alignment:
| Q |
46 |
ttggtgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatcctattgctttggcaccggctgttttagctagcatatataaggatttaa |
145 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26354949 |
ttggtgaaaagttctttgtttcctattgctattcatcttgctagaggaaattctattgctttggcaccggctgttttagctagcatatataaggatttaa |
26354850 |
T |
 |
| Q |
146 |
ctttgtttaagaaaacaatagttggtttgtcaaaatatcctgttggtggcgatagattttctaaggaggttagtcttcaatcacccttttacttggttca |
245 |
Q |
| |
|
||||||||||||| || |||| ||||||||||| |||||||||| ||||||| | || || |||| |||||||||||| |||||||||||||| |
|
|
| T |
26354849 |
gcgtgtttaagaaaaccattgttgatttgtcaaaattatctgttggtggtgatagatatcctttagaagttactcttcaatcaccgttttacttggttca |
26354750 |
T |
 |
| Q |
246 |
aatttgggtgttgggaaggttcaaaa |
271 |
Q |
| |
|
||||||||||| || |||||||||| |
|
|
| T |
26354749 |
aatttgggtgtgggagaggttcaaaa |
26354724 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 97; Significance: 1e-47; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 60 - 180
Target Start/End: Complemental strand, 22651901 - 22651781
Alignment:
| Q |
60 |
tttgtttcctattgctgttcatcttgctagaggaaatcctattgctttggcaccggctgttttagctagcatatataaggatttaactttgtttaagaaa |
159 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||| |
|
|
| T |
22651901 |
tttgtttcctattgctgttcatcttgctagaggaaatcctattgcttttgcaccagctgttttggctagcatgtataaggatttaactttgtttaagaaa |
22651802 |
T |
 |
| Q |
160 |
acaatagttggtttgtcaaaa |
180 |
Q |
| |
|
||||| |||| |||||||||| |
|
|
| T |
22651801 |
acaattgttgatttgtcaaaa |
22651781 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 22689725 - 22689564
Alignment:
| Q |
1 |
tttcttgctacttggttgtcggtttatgtttttcctcataaagctttg---gtgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatc |
97 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||||||||||| | || || |||| ||||||||| ||||| || ||||||| |||||||| ||| |
|
|
| T |
22689725 |
tttcttgctacttggttgtcaatttttgtttttcctcataaaaatatgtcggtcaaaagttctttgtttactatttctattcatctggctagaggcaata |
22689626 |
T |
 |
| Q |
98 |
ctattgctttggcaccggctgttttagctagcatatataaggatttaactttgtttaagaaa |
159 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||||||||||||||| | ||||||||||||| |
|
|
| T |
22689625 |
ctattgctttggcacctgctgttttggctagcatatataaggatttgagtttgtttaagaaa |
22689564 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 22685750 - 22685642
Alignment:
| Q |
1 |
tttcttgctacttggttgtcggtttatgtttttcctcataaagctttggtgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatccta |
100 |
Q |
| |
|
||||||||| |||||||||| ||| |||||||||||||||| ||||||||||| ||| ||||||| |||||| |||||||||||||||| ||||||| |
|
|
| T |
22685750 |
tttcttgctgcttggttgtcactttttgtttttcctcataaaattttggtgaaaacttctatgtttccgattgctattcatcttgctagagggaatccta |
22685651 |
T |
 |
| Q |
101 |
ttgctttgg |
109 |
Q |
| |
|
||||||||| |
|
|
| T |
22685650 |
ttgctttgg |
22685642 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 58 - 180
Target Start/End: Complemental strand, 11564144 - 11564022
Alignment:
| Q |
58 |
tctttgtttcctattgctgttcatcttgctagaggaaatcctattgctttggcaccggctgttttagctagcatatataaggatttaactttgtttaaga |
157 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| | ||| | ||| || ||||||||||||| |||||||||| |
|
|
| T |
11564144 |
tctttgtttcctattgctgttcatcttgctagaggaaaacctattgctttagcaccgtcggttctggcttgcttatataaggatttgcgtttgtttaagg |
11564045 |
T |
 |
| Q |
158 |
aaacaatagttggtttgtcaaaa |
180 |
Q |
| |
|
| ||||| ||||| ||| ||||| |
|
|
| T |
11564044 |
agacaattgttggattgacaaaa |
11564022 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 22689521 - 22689473
Alignment:
| Q |
223 |
caatcacccttttacttggttcaaatttgggtgttgggaaggttcaaaa |
271 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| || |||||||||| |
|
|
| T |
22689521 |
caatcacccttttacttggttcaagtttgggtgtgggagaggttcaaaa |
22689473 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 22685641 - 22685596
Alignment:
| Q |
135 |
taaggatttaactttgtttaagaaaacaatagttggtttgtcaaaa |
180 |
Q |
| |
|
||||||||||| ||| |||||||||||||| |||| |||||||||| |
|
|
| T |
22685641 |
taaggatttaagtttttttaagaaaacaattgttgatttgtcaaaa |
22685596 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 67; Significance: 8e-30; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 75 - 253
Target Start/End: Complemental strand, 6397732 - 6397554
Alignment:
| Q |
75 |
tgttcatcttgctagaggaaatcctattgctttggcaccggctgttttagctagcatatataaggatttaactttgtttaagaaaacaatagttggtttg |
174 |
Q |
| |
|
|||| |||||||||||| |||||| |||||||||||||| ||||||| |||| |||||||||||||||| |||| |||||||||||||| ||| |||| |
|
|
| T |
6397732 |
tgttaatcttgctagagaaaatccaattgctttggcaccatctgttttggctatcatatataaggatttatctttatttaagaaaacaattattgatttg |
6397633 |
T |
 |
| Q |
175 |
tcaaaatatcctgttggtggcgatagattttctaaggaggttagtcttcaatcacccttttacttggttcaaatttggg |
253 |
Q |
| |
|
|| ||||||| |||||||| |||| |||| | || ||| ||||| |||||| ||||||||||||||| |||||| |
|
|
| T |
6397632 |
tcgaaatatcttgttggtgatgataaatttcatgttgaatttactcttctatcacctttttacttggttcaagtttggg |
6397554 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 204
Target Start/End: Original strand, 6398312 - 6398515
Alignment:
| Q |
4 |
cttgctacttggttgtcggtttatgtttttcctcataaagctttggtgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatcctattg |
103 |
Q |
| |
|
||||||| |||||||| ||| |||||||||| |||| | ||||||||| | ||||||| ||||||||||| |||| |||||||||||||| || | |
|
|
| T |
6398312 |
cttgctaattggttgttaatttttgtttttcctagtaaaacaatggtgaaaagttgtttgttttctattgctgttaatctcgctagaggaaatccaatcg |
6398411 |
T |
 |
| Q |
104 |
ctttggcaccggctgttttagctagc--atatataaggatttaactttgtttaag-aaaacaatagttggtttgtcaaaatatcctgttggtggcgatag |
200 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||||||||||||||| |||||| |||| ||| ||| | |||||||||||| ||||| || ||||| |
|
|
| T |
6398412 |
gtttggcaccagctgttttagctagcatatatataaggatttaactttatttaagaaaaaaaattattgatatgtcaaaatatcatgttgatgatgatag |
6398511 |
T |
 |
| Q |
201 |
attt |
204 |
Q |
| |
|
|||| |
|
|
| T |
6398512 |
attt |
6398515 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 62; Significance: 8e-27; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 4 - 193
Target Start/End: Original strand, 12581443 - 12581632
Alignment:
| Q |
4 |
cttgctacttggttgtcggtttatgtttttcctcataaagctttggtgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatcctattg |
103 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||| || | ||||||||| | ||||||| |||||||| || ||||||||||| |||||| ||| |
|
|
| T |
12581443 |
cttgctacttggttgtcaatttttgtttttcctcgtagaaaaatggtgaaaagttatttgttttctattgctattaatcttgctagaagaaatcgaatta |
12581542 |
T |
 |
| Q |
104 |
ctttggcaccggctgttttagctagcatatataaggatttaactttgtttaagaaaacaatagttggtttgtcaaaatatcctgttggtg |
193 |
Q |
| |
|
||||| | | ||||||| ||||||||| |||||||||||||||| |||||||||||||| ||| | |||||||||||| |||||||| |
|
|
| T |
12581543 |
ctttgccgcaaactgttttggctagcataaataaggatttaactttatttaagaaaacaattattgatctgtcaaaatatcttgttggtg |
12581632 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 193
Target Start/End: Original strand, 12497260 - 12497449
Alignment:
| Q |
4 |
cttgctacttggttgtcggtttatgtttttcctcataaagctttggtgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatcctattg |
103 |
Q |
| |
|
|||||||| |||||||| ||| |||||||||||||| | |||||| || | ||||||| |||||||| || ||||||||||| |||||| ||| |
|
|
| T |
12497260 |
cttgctacctggttgtcaatttttgtttttcctcatagaaaaatggtgataagttatttgttttctattgctattaatcttgctagaagaaatcaaatta |
12497359 |
T |
 |
| Q |
104 |
ctttggcaccggctgttttagctagcatatataaggatttaactttgtttaagaaaacaatagttggtttgtcaaaatatcctgttggtg |
193 |
Q |
| |
|
||||| | || |||||||| ||||||||| |||| ||||||||||| |||||||||||||| ||| | |||||||| ||| | |||||| |
|
|
| T |
12497360 |
ctttgccgccagctgttttggctagcataaataacgatttaactttatttaagaaaacaattattgatctgtcaaaacatcttattggtg |
12497449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 193
Target Start/End: Original strand, 12521125 - 12521314
Alignment:
| Q |
4 |
cttgctacttggttgtcggtttatgtttttcctcataaagctttggtgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatcctattg |
103 |
Q |
| |
|
|||||||| |||||||| ||| |||||||||||||| | |||||| || | ||||||| |||||||| || ||||||||||| |||||| ||| |
|
|
| T |
12521125 |
cttgctacctggttgtcaatttttgtttttcctcatagaaaaatggtgataagttatttgttttctattgctattaatcttgctagaagaaatcaaatta |
12521224 |
T |
 |
| Q |
104 |
ctttggcaccggctgttttagctagcatatataaggatttaactttgtttaagaaaacaatagttggtttgtcaaaatatcctgttggtg |
193 |
Q |
| |
|
||||| | || |||||||| ||||||||| |||| ||||||||||| |||||||||||||| ||| | |||||||| ||| | |||||| |
|
|
| T |
12521225 |
ctttgccgccagctgttttggctagcataaataacgatttaactttatttaagaaaacaattattgatctgtcaaaacatcttattggtg |
12521314 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 10 - 160
Target Start/End: Complemental strand, 12519853 - 12519704
Alignment:
| Q |
10 |
acttggttgtcggtttatgtttttcctcataaagctttggtgaaaaaatctttgtttcctattgctgttcatcttgctagaggaaatcctattgctttgg |
109 |
Q |
| |
|
||||||||||| ||| |||||||||||||||| |||||| ||| | ||||||| || ||| |||| ||||||||||| ||||||| |||||||||| |
|
|
| T |
12519853 |
acttggttgtcaatttttgtttttcctcataaa-aaatggtgacaaattgtttgttttctgttggtgttaatcttgctagaagaaatccaattgctttgg |
12519755 |
T |
 |
| Q |
110 |
caccggctgttttagctagcatatataaggatttaactttgtttaagaaaa |
160 |
Q |
| |
|
| | |||||| ||||||||| ||||||| |||||||| |||||||||| |
|
|
| T |
12519754 |
tggcagttgttttggctagcataaataaggacttaactttatttaagaaaa |
12519704 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 160
Target Start/End: Complemental strand, 12495972 - 12495895
Alignment:
| Q |
83 |
ttgctagaggaaatcctattgctttggcaccggctgttttagctagcatatataaggatttaactttgtttaagaaaa |
160 |
Q |
| |
|
|||||||| ||||||| |||||||||| | | |||||| ||||||||| |||||||||||||||| ||||| |||| |
|
|
| T |
12495972 |
ttgctagaagaaatccaattgctttggtggcagttgttttggctagcataaataaggatttaactttatttaataaaa |
12495895 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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