View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8929_low_32 (Length: 293)
Name: NF8929_low_32
Description: NF8929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8929_low_32 |
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Alignment Details
Target: chr1 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 10 - 277
Target Start/End: Complemental strand, 34646918 - 34646651
Alignment:
| Q |
10 |
ggtgttcgagaagacgtcaatatataaactataaactactaaaaaacaagttgaattaacaacgaaaattagaaacgggaaaatataaaattcatctcta |
109 |
Q |
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| T |
34646918 |
ggtgttcgagaagacggcaatatataaactataaactactaaaaaacaagttgaattaacaacgaaaattagaaacgggaaaatataaaattcatctcta |
34646819 |
T |
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| Q |
110 |
caagttggaaactctaaaattgaagatcagatccattttttccatcactaattcttgttgataattcaacttttgctagtagttgaaatagagagaagaa |
209 |
Q |
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| T |
34646818 |
caagttggaaactctaaaattgaagatcagatccattttttccatcactaattcttgttgataattcaacttttgctagtagttgaaatagagagaagaa |
34646719 |
T |
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| Q |
210 |
atcaaatgagtagtaatacttgtattaaatatatccatgacttctcccaagttaattaccatgatcct |
277 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
34646718 |
atcaaatgagtagtaatacttgtattaaatatattcatgacttctcccaagttaattaccatgatcct |
34646651 |
T |
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