View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8929_low_4 (Length: 832)

Name: NF8929_low_4
Description: NF8929
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8929_low_4
NF8929_low_4
[»] chr8 (16 HSPs)
chr8 (19-424)||(9234220-9234623)
chr8 (485-832)||(9234686-9235034)
chr8 (615-825)||(9212472-9212682)
chr8 (520-570)||(9498932-9498982)
chr8 (520-589)||(2044678-2044747)
chr8 (494-595)||(5899494-5899596)
chr8 (517-570)||(5899233-5899286)
chr8 (521-559)||(23936313-23936351)
chr8 (516-570)||(29219360-29219414)
chr8 (521-558)||(7658637-7658674)
chr8 (521-558)||(7658833-7658870)
chr8 (502-559)||(12280324-12280381)
chr8 (521-558)||(31947889-31947926)
chr8 (521-558)||(34608620-34608657)
chr8 (521-558)||(44807316-44807353)
chr8 (494-559)||(45522406-45522471)
[»] chr3 (14 HSPs)
chr3 (494-593)||(16883749-16883849)
chr3 (494-570)||(3354900-3354976)
chr3 (500-570)||(3354772-3354842)
chr3 (494-594)||(43902530-43902630)
chr3 (516-570)||(33687627-33687681)
chr3 (494-594)||(50420836-50420937)
chr3 (520-591)||(49579153-49579225)
chr3 (520-594)||(15311837-15311911)
chr3 (494-592)||(33687929-33688028)
chr3 (521-559)||(17258172-17258210)
chr3 (521-559)||(36317279-36317317)
chr3 (521-559)||(51224960-51224998)
chr3 (493-570)||(33381533-33381610)
chr3 (521-558)||(45125130-45125167)
[»] chr2 (22 HSPs)
chr2 (497-594)||(31227106-31227204)
chr2 (494-594)||(14289264-14289364)
chr2 (494-559)||(35500306-35500371)
chr2 (521-558)||(35180527-35180564)
chr2 (516-559)||(23993896-23993939)
chr2 (521-559)||(23048324-23048362)
chr2 (521-559)||(28719351-28719389)
chr2 (521-558)||(2755191-2755228)
chr2 (521-558)||(10857374-10857411)
chr2 (521-558)||(10857606-10857643)
chr2 (521-558)||(11188341-11188378)
chr2 (521-558)||(12542398-12542435)
chr2 (505-590)||(13025532-13025617)
chr2 (500-553)||(13491776-13491829)
chr2 (521-558)||(16238147-16238184)
chr2 (521-558)||(23280872-23280909)
chr2 (521-558)||(28217114-28217151)
chr2 (521-558)||(28733225-28733262)
chr2 (521-558)||(32661676-32661713)
chr2 (521-558)||(35173055-35173092)
chr2 (521-558)||(36286395-36286432)
chr2 (521-558)||(41454783-41454820)
[»] chr1 (25 HSPs)
chr1 (502-590)||(13575125-13575213)
chr1 (520-594)||(51690441-51690516)
chr1 (494-593)||(39384542-39384642)
chr1 (520-589)||(29816413-29816482)
chr1 (521-593)||(367161-367234)
chr1 (517-590)||(39411891-39411963)
chr1 (494-593)||(10532214-10532313)
chr1 (516-570)||(84257-84311)
chr1 (516-593)||(1406601-1406679)
chr1 (496-570)||(1484640-1484714)
chr1 (494-593)||(29816118-29816215)
chr1 (521-598)||(31907934-31908012)
chr1 (521-559)||(37008251-37008289)
chr1 (521-559)||(50503735-50503773)
chr1 (517-601)||(83881-83966)
chr1 (521-558)||(6606941-6606978)
chr1 (494-559)||(10231091-10231156)
chr1 (521-558)||(15911944-15911981)
chr1 (521-558)||(21932029-21932066)
chr1 (521-558)||(22182657-22182694)
chr1 (521-558)||(26932617-26932654)
chr1 (493-570)||(39384261-39384337)
chr1 (521-558)||(40345572-40345609)
chr1 (521-558)||(50591592-50591629)
chr1 (521-558)||(52201400-52201437)
[»] chr7 (16 HSPs)
chr7 (494-593)||(24432335-24432435)
chr7 (494-594)||(35828347-35828448)
chr7 (516-595)||(27756262-27756342)
chr7 (494-592)||(35793375-35793474)
chr7 (494-561)||(43657810-43657877)
chr7 (521-559)||(30283440-30283478)
chr7 (494-558)||(9477168-9477232)
chr7 (521-559)||(42438018-42438056)
chr7 (521-558)||(9477432-9477469)
chr7 (521-558)||(20588396-20588433)
chr7 (521-558)||(29163135-29163172)
chr7 (521-558)||(36801605-36801642)
chr7 (521-558)||(40139564-40139601)
chr7 (521-558)||(40790912-40790949)
chr7 (521-558)||(43724597-43724634)
chr7 (521-558)||(48925946-48925983)
[»] chr6 (12 HSPs)
chr6 (516-593)||(13398384-13398458)
chr6 (494-565)||(2164672-2164743)
chr6 (494-565)||(2176305-2176376)
chr6 (494-570)||(1614837-1614913)
chr6 (494-565)||(12101672-12101743)
chr6 (521-559)||(11623193-11623231)
chr6 (494-558)||(1615014-1615078)
chr6 (521-558)||(2113000-2113037)
chr6 (521-558)||(4037073-4037110)
chr6 (493-570)||(10088106-10088183)
chr6 (521-558)||(24119527-24119564)
chr6 (521-558)||(31175571-31175608)
[»] chr4 (17 HSPs)
chr4 (494-589)||(30626587-30626682)
chr4 (505-579)||(3369861-3369935)
chr4 (520-558)||(6289470-6289508)
chr4 (521-558)||(4049364-4049401)
chr4 (519-595)||(11787060-11787136)
chr4 (519-595)||(11799227-11799303)
chr4 (518-559)||(16323011-16323052)
chr4 (520-593)||(30627014-30627088)
chr4 (521-595)||(49804338-49804412)
chr4 (521-558)||(1186693-1186730)
chr4 (521-558)||(10308605-10308642)
chr4 (521-558)||(19725863-19725900)
chr4 (521-558)||(40489246-40489283)
chr4 (521-601)||(47742222-47742303)
chr4 (520-589)||(49000598-49000667)
chr4 (521-558)||(49869660-49869697)
chr4 (521-558)||(55732929-55732966)
[»] chr5 (14 HSPs)
chr5 (513-563)||(22408780-22408830)
chr5 (520-593)||(38498118-38498192)
chr5 (494-593)||(11167872-11167972)
chr5 (519-565)||(36501428-36501474)
chr5 (527-593)||(20364681-20364748)
chr5 (516-570)||(12166828-12166882)
chr5 (493-559)||(34969111-34969177)
chr5 (521-559)||(38163657-38163695)
chr5 (540-570)||(38498266-38498296)
chr5 (521-559)||(42169408-42169446)
chr5 (521-558)||(8006254-8006291)
chr5 (521-558)||(8714193-8714230)
chr5 (521-558)||(10331991-10332028)
chr5 (521-558)||(39573767-39573804)
[»] scaffold0006 (2 HSPs)
scaffold0006 (502-575)||(161732-161805)
scaffold0006 (502-560)||(162266-162324)
[»] scaffold1088 (1 HSPs)
scaffold1088 (505-589)||(2096-2180)
[»] scaffold0286 (1 HSPs)
scaffold0286 (494-565)||(17666-17737)
[»] scaffold0172 (1 HSPs)
scaffold0172 (494-592)||(9852-9950)
[»] scaffold0092 (1 HSPs)
scaffold0092 (494-570)||(37807-37882)
[»] scaffold0854 (1 HSPs)
scaffold0854 (521-559)||(3369-3407)
[»] scaffold1301 (1 HSPs)
scaffold1301 (521-558)||(1289-1326)
[»] scaffold0028 (1 HSPs)
scaffold0028 (521-558)||(32251-32288)


Alignment Details
Target: chr8 (Bit Score: 303; Significance: 1e-170; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 19 - 424
Target Start/End: Original strand, 9234220 - 9234623
Alignment:
Q  19 gtgtacttgttacagtactggaaattccaacacttttctaattagtcatgttattataagttccacaattgtattccttagcttcataaagaggtgcaaa 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||   |||||||||||||||||||||||||||||| |||| |||||||    
T  9234220 gtgtacttgttacagtactggaaattccaacacttttctaattagtcatgtaat---aagttccacaattgtattccttagcttcatgaagacgtgcaaa 9234316  T
Q  119 cttataataaatgtctaatacacaattttaaaacannnnnnnn--gaaggaacacaattttaaaacatgtaagttactctaaacatgtctcattgggcgt 216  Q
    ||||||||||||||||||||||||||||||||||           ||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||    
T  9234317 cttataataaatgtctaatacacaattttaaaactttttttttttgaaggaacacaattttaaaacttgtaagttactctaaacttgtct-attgggcgt 9234415  T
Q  217 gccaatttgtttacgaacattttttatctgaataaagtaagccaaatttgaaacataaataaacgtgtaatcaatgtgactgcgagagtcctaccaagtt 316  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9234416 gccaatttgtttacaaacattttttatctgaataaaataagccaaatttaaaacataaataaacgtgtaatcaacgtgactgcgagagtcctaccaagtt 9234515  T
Q  317 gataggtagactcatgagattaagggttattttggaaaatgtctctgaatcagattcatactttatgctcaaaattggctaaaagtagtttgccgtcgga 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  9234516 gataggtagactcatgagattaagggttattttggaaaatgtctctgaatcagattcatactttatgctcaaaattggctaaaagtagtttgacatcgga 9234615  T
Q  417 ttgcagag 424  Q
    ||||||||    
T  9234616 ttgcagag 9234623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 485 - 832
Target Start/End: Original strand, 9234686 - 9235034
Alignment:
Q  485 cttctaattaaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttagtgg-tcaaaactac 583  Q
    ||||||||||||| ||||||||||||   | ||  |||||||||||||||||||  |||||||||||||||||||||||||||||  || ||||||||||    
T  9234686 cttctaattaaaaagggcaatacttaggaggctaaattgtattttaatttgttagagggccaaaatcgcaacttcctgatatttaagggatcaaaactac 9234785  T
Q  584 tattaagccttataaataatgacgaaggtagtactaattcagatagttaaaatttagagccaaaagcaaggctttattgacctaagttaagacggctatt 683  Q
    ||||||||||||||||||||| || ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9234786 tattaagccttataaataatggcggaggtaatactaattaagatagttaaaatttagagccaaaagcaaggctttattgacctaagttaagacggctatt 9234885  T
Q  684 cacacaagtaatataaatacaactcgaatgtgtgtggagtcagaaatcaatgagaaagaagaaataatacaaaagtcggaattgtatacaaataagttga 783  Q
    ||||| |||||||||||||||||| |||  ||||||| ||| |||||| | ||||||||||||| ||||||||||| ||||  |||||||||||||||||    
T  9234886 cacacgagtaatataaatacaacttgaacatgtgtggtgtcggaaatcgaagagaaagaagaaacaatacaaaagttggaaccgtatacaaataagttga 9234985  T
Q  784 tagcaaattgtgttcgaggaatattttcgatactatgaatggtaaaagc 832  Q
    || ||||||||||||||||||||||||||||||||||||||| ||||||    
T  9234986 taacaaattgtgttcgaggaatattttcgatactatgaatggcaaaagc 9235034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 615 - 825
Target Start/End: Original strand, 9212472 - 9212682
Alignment:
Q  615 tactaattcagatagttaaaatttagagccaaaagcaagg-ctttattgacctaa--gttaagacggctattcacacaagtaatataaatacaactcgaa 711  Q
    |||||||| | | |||||||||||||| || |||| |||| ||||| ||||||||  ||| |||||||||| |||||||||||||   |||||||||| |    
T  9212472 tactaattaaaacagttaaaatttagatcctaaagtaaggactttactgacctaatggttgagacggctatgcacacaagtaata---atacaactcgga 9212568  T
Q  712 tgtgtgtggagtcagaaatcaatgagaaagaagaaataatacaaaagtcggaattgtatacaaataagttgatagcaaattgtgttcgaggaatattttc 811  Q
    | ||||||  ||  | |||||||||||||||||||||||||||| ||| |||| | |||| | |||  ||||||||||||||||||||| |||||| |||    
T  9212569 tatgtgtgatgttgggaatcaatgagaaagaagaaataatacaacagttggaactttatatacatacattgatagcaaattgtgttcgaagaatatcttc 9212668  T
Q  812 gatactatgaatgg 825  Q
     | || ||||||||    
T  9212669 aacacaatgaatgg 9212682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 520 - 570
Target Start/End: Complemental strand, 9498982 - 9498932
Alignment:
Q  520 attgtattttaatttgttatggggccaaaatcgcaacttcctgatatttag 570  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||| ||||    
T  9498982 attgtattttattttgttatggggtcaaaatcgcaacttcctgatacttag 9498932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 520 - 589
Target Start/End: Complemental strand, 2044747 - 2044678
Alignment:
Q  520 attgtattttaatttgttatggggccaaaatcgcaacttcctgatatttagtggtcaaaactactattaa 589  Q
    ||||||||||| |||||||||||||| ||||||||| ||| ||||| |||| || ||||||| |||||||    
T  2044747 attgtattttattttgttatggggccgaaatcgcaatttcatgatacttaggggccaaaactgctattaa 2044678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 494 - 595
Target Start/End: Original strand, 5899494 - 5899596
Alignment:
Q  494 aaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttag-tggtcaaaactactattaagcc 592  Q
    ||||| |||||||||||  || ||| ||||||||||| ||||||||| | ||||||| |||||||  ||||| |||| ||| |||||||  |||||||||    
T  5899494 aaaagaggcaatacttagggggctgaattgtattttattttgttatgagaccaaaattgcaactttgtgatacttagatggccaaaactgttattaagcc 5899593  T
Q  593 tta 595  Q
    |||    
T  5899594 tta 5899596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 570
Target Start/End: Complemental strand, 5899286 - 5899233
Alignment:
Q  517 tggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttag 570  Q
    |||||||||||||| ||||||| || ||| ||||||||||||||||||| ||||    
T  5899286 tggattgtattttattttgttagggagccgaaatcgcaacttcctgatacttag 5899233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 521 - 559
Target Start/End: Complemental strand, 23936351 - 23936313
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaacttc 559  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  23936351 ttgtattttaattagttagggggccaaaatcgcaacttc 23936313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 516 - 570
Target Start/End: Original strand, 29219360 - 29219414
Alignment:
Q  516 ctggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttag 570  Q
    ||||||||||| ||| ||||||| ||||| |||||||||||||||| ||| ||||    
T  29219360 ctggattgtatattattttgttagggggctaaaatcgcaacttcctaatacttag 29219414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 7658674 - 7658637
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  7658674 ttgtattttaattagttatggggccaaaatcacaactt 7658637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 7658833 - 7658870
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  7658833 ttgtattttaattagttagggggccaaaatcgcaactt 7658870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 559
Target Start/End: Original strand, 12280324 - 12280381
Alignment:
Q  502 caatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttc 559  Q
    |||||| || |||||||  |||||||||||||  ||| ||||||||||||||||||||    
T  12280324 caatacatagtggactgttttgtattttaattaattagggggccaaaatcgcaacttc 12280381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 31947926 - 31947889
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  31947926 ttgtattttaattagttagggggccaaaatcgcaactt 31947889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 34608620 - 34608657
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  34608620 ttgtattttaattagttagggggccaaaatcgcaactt 34608657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 44807316 - 44807353
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  44807316 ttgtattttaattagttagggggccaaaatcgcaactt 44807353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 494 - 559
Target Start/End: Original strand, 45522406 - 45522471
Alignment:
Q  494 aaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttc 559  Q
    |||||||||||||||||  || | |  |||||||||| ||||||| ||||| ||||||||||||||    
T  45522406 aaaaggggcaatacttagggggcggttttgtattttattttgttagggggctaaaatcgcaacttc 45522471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 3e-16; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 494 - 593
Target Start/End: Original strand, 16883749 - 16883849
Alignment:
Q  494 aaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgatattta-gtggtcaaaactactattaagcc 592  Q
    |||||| ||| ||||||  || ||||||||||||||||||||||| |||| |||||||||||||| |||||| ||| | || ||||| ||||||||||||    
T  16883749 aaaaggagcagtacttagggggctggattgtattttaatttgttagggggtcaaaatcgcaactttctgatacttagggggccaaaaatactattaagcc 16883848  T
Q  593 t 593  Q
    |    
T  16883849 t 16883849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 494 - 570
Target Start/End: Original strand, 3354900 - 3354976
Alignment:
Q  494 aaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttag 570  Q
    |||| ||||||||||||  || ||||||||||||||| ||||||| ||| |||||||||||||||| ||||| ||||    
T  3354900 aaaatgggcaatacttagggggctggattgtattttattttgttaggggaccaaaatcgcaacttcttgatacttag 3354976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 500 - 570
Target Start/End: Complemental strand, 3354842 - 3354772
Alignment:
Q  500 ggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttag 570  Q
    |||||||||||| || ||||||||||||||| ||| ||| | |||||||||||||| ||||||||| ||||    
T  3354842 ggcaatacttaaggggctggattgtattttattttcttaggaggccaaaatcgcaatttcctgatacttag 3354772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 494 - 594
Target Start/End: Complemental strand, 43902630 - 43902530
Alignment:
Q  494 aaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgata-tttagtggtcaaaactactattaagcc 592  Q
    |||||||||||||||||  ||  | |||||||||||| ||||||| |||||||||||| ||||||||| ||| || || |||| ||||| ||||||||||    
T  43902630 aaaaggggcaatacttagggggttagattgtattttattttgttaaggggccaaaatcacaacttcctaatacttaaggggtc-aaactgctattaagcc 43902532  T
Q  593 tt 594  Q
    ||    
T  43902531 tt 43902530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 516 - 570
Target Start/End: Complemental strand, 33687681 - 33687627
Alignment:
Q  516 ctggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttag 570  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||| |||||| ||||    
T  33687681 ctggattgtattttattttgttagggggctaaaatcgcaactttctgatacttag 33687627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 494 - 594
Target Start/End: Original strand, 50420836 - 50420937
Alignment:
Q  494 aaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgatattta-gtggtcaaaactactattaagcc 592  Q
    |||| ||||||||||||  || || |||||| ||||| ||||||| |||| ||||||||||||||| | ||| ||| | || ||||||| ||||||||||    
T  50420836 aaaatgggcaatacttagagggctagattgtgttttattttgttaaggggtcaaaatcgcaacttcataatacttaggaggccaaaactgctattaagcc 50420935  T
Q  593 tt 594  Q
    ||    
T  50420936 tt 50420937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 520 - 591
Target Start/End: Original strand, 49579153 - 49579225
Alignment:
Q  520 attgtattttaatttgttatggggccaaaatcgcaacttcctgata-tttagtggtcaaaactactattaagc 591  Q
    ||||||||||| ||||||| ||| | ||||||||||||| |||||| || || |||||||||| |||||||||    
T  49579153 attgtattttattttgttaggggactaaaatcgcaactttctgatacttaaggggtcaaaactgctattaagc 49579225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 520 - 594
Target Start/End: Complemental strand, 15311911 - 15311837
Alignment:
Q  520 attgtattttaatttgttatggggccaaaatcgcaacttcctgatatttagtgg-tcaaaactactattaagcctt 594  Q
    ||||||||||| ||||||| ||||||||||| |||||||| | ||| |||| || |||||||| ||||||||||||    
T  15311911 attgtattttattttgtta-ggggccaaaattgcaacttcataatacttagaggatcaaaactgctattaagcctt 15311837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 494 - 592
Target Start/End: Original strand, 33687929 - 33688028
Alignment:
Q  494 aaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttagtg-gtcaaaactactattaagcc 592  Q
    ||||| |||| ||||||  || ||| ||||||||||| ||||||| |||| || ||||||||||| |||||| |||| | | ||||||| ||||||||||    
T  33687929 aaaagaggcagtacttagggggctgaattgtattttattttgttagggggtcagaatcgcaactttctgatacttagagagccaaaactgctattaagcc 33688028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 521 - 559
Target Start/End: Original strand, 17258172 - 17258210
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaacttc 559  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  17258172 ttgtattttaatttgttaggggtccaaaatcgcaacttc 17258210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 521 - 559
Target Start/End: Original strand, 36317279 - 36317317
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaacttc 559  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  36317279 ttgtattttaattagttatggggccaaaatcacaacttc 36317317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 521 - 559
Target Start/End: Complemental strand, 51224998 - 51224960
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaacttc 559  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  51224998 ttgtattttaattagttagggggccaaaatcgcaacttc 51224960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 493 - 570
Target Start/End: Complemental strand, 33381610 - 33381533
Alignment:
Q  493 taaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttag 570  Q
    ||||| ||||||||||||  |  ||| ||||||||||| ||||||| |||| |||||| |||||||||| ||| ||||    
T  33381610 taaaatgggcaatacttagggagctgaattgtattttattttgttaaggggtcaaaattgcaacttcctaatacttag 33381533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 45125167 - 45125130
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  45125167 ttgtattttaattagttagggggccaaaatcgcaactt 45125130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 497 - 594
Target Start/End: Original strand, 31227106 - 31227204
Alignment:
Q  497 aggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgatattta-gtggtcaaaactactattaagcctt 594  Q
    |||| |||||||||| || ||| ||||||||||| |||||||  ||| ||||||||||||||||||||||||| | || ||||||| ||||||| ||||    
T  31227106 agggacaatacttaaagggctgtattgtattttattttgttagagggtcaaaatcgcaacttcctgatatttaggaggccaaaactgctattaaacctt 31227204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 494 - 594
Target Start/End: Complemental strand, 14289364 - 14289264
Alignment:
Q  494 aaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttagtggtcaaaactactattaagcct 593  Q
    ||||| |||| ||||||| || ||  ||||||||||| ||||||| |||||||||||||||||||| ||||| ||||  |  |||||| |||||||||||    
T  14289364 aaaagaggcagtacttaaggggctaaattgtattttattttgttagggggccaaaatcgcaacttcatgatacttaggaggaaaaactgctattaagcct 14289265  T
Q  594 t 594  Q
    |    
T  14289264 t 14289264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 494 - 559
Target Start/End: Original strand, 35500306 - 35500371
Alignment:
Q  494 aaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttc 559  Q
    |||||||||||||||||| || | |  |||||||||| ||||||| ||||||||||||||||||||    
T  35500306 aaaaggggcaatacttaaggggcggttttgtattttattttgttagggggccaaaatcgcaacttc 35500371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 35180527 - 35180564
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    |||||||||||||||||| |||||||||||||||||||    
T  35180527 ttgtattttaatttgttagggggccaaaatcgcaactt 35180564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 559
Target Start/End: Original strand, 23993896 - 23993939
Alignment:
Q  516 ctggattgtattttaatttgttatggggccaaaatcgcaacttc 559  Q
    ||||||||||||||| ||||||| ||||||||||| ||||||||    
T  23993896 ctggattgtattttattttgttagggggccaaaattgcaacttc 23993939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 521 - 559
Target Start/End: Complemental strand, 23048362 - 23048324
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaacttc 559  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  23048362 ttgtattttaattagttagggggccaaaatcgcaacttc 23048324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 521 - 559
Target Start/End: Complemental strand, 28719389 - 28719351
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaacttc 559  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  28719389 ttgtattttaattagttagggggccaaaatcgcaacttc 28719351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 2755191 - 2755228
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  2755191 ttgtattttaattagttagggggccaaaatcgcaactt 2755228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 10857411 - 10857374
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  10857411 ttgtattttaattagttagggggccaaaatcgcaactt 10857374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 10857606 - 10857643
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  10857606 ttgtattttaattagttagggggccaaaatcgcaactt 10857643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 11188378 - 11188341
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  11188378 ttgtattttaattagttagggggccaaaatcgcaactt 11188341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 12542398 - 12542435
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  12542398 ttgtattttaattagttagggggccaaaatcgcaactt 12542435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 590
Target Start/End: Complemental strand, 13025617 - 13025532
Alignment:
Q  505 tacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttagtggtcaaaactactattaag 590  Q
    ||||||| |||||| ||||||||||| | |||||    | ||||||| ||||||||| |||||||| | |||||||| ||||||||    
T  13025617 tacttaagggactgaattgtattttattctgttagatagtcaaaatcacaacttcctaatatttagggatcaaaactgctattaag 13025532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 500 - 553
Target Start/End: Original strand, 13491776 - 13491829
Alignment:
Q  500 ggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgc 553  Q
    |||||||||||  ||  |||||||||||||| ||||||| ||||||||||||||    
T  13491776 ggcaatacttagggggatggattgtattttattttgttaaggggccaaaatcgc 13491829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 16238184 - 16238147
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  16238184 ttgtattttaattagttagggggccaaaatcgcaactt 16238147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 23280872 - 23280909
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  23280872 ttgtattttaattagttagggggccaaaatcgcaactt 23280909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 28217114 - 28217151
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  28217114 ttgtattttaattagttagggggccaaaatcgcaactt 28217151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 28733225 - 28733262
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  28733225 ttgtattttaattagttaaggggccaaaatcgcaactt 28733262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 32661676 - 32661713
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  32661676 ttgtattttaattagttagggggccaaaatcgcaactt 32661713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 35173055 - 35173092
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  35173055 ttgtattttaatttgttagggggtcaaaatcgcaactt 35173092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 36286395 - 36286432
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  36286395 ttgtattttaattagttagggggccaaaatcgcaactt 36286432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 41454783 - 41454820
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  41454783 ttgtattttaattagttaaggggccaaaatcgcaactt 41454820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 502 - 590
Target Start/End: Original strand, 13575125 - 13575213
Alignment:
Q  502 caatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttagtggtc-aaaactactattaag 590  Q
    |||||||||| || ||||||||||||||| |||||||| |||||||||||||| |||||||||| |||| || | |||||| ||||||||    
T  13575125 caatacttaaggggctggattgtattttattttgttat-gggccaaaatcgcatcttcctgatacttagggggctaaaactgctattaag 13575213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 520 - 594
Target Start/End: Original strand, 51690441 - 51690516
Alignment:
Q  520 attgtattttaatttgttatggggccaaaatcgcaacttcctgatattta-gtggtcaaaactactattaagcctt 594  Q
    ||||||||||| ||||||| | ||||||||||||||||| | |||||||| | | |||||||||||||||||||||    
T  51690441 attgtattttattttgttacgaggccaaaatcgcaactttcggatatttaggagatcaaaactactattaagcctt 51690516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 494 - 593
Target Start/End: Original strand, 39384542 - 39384642
Alignment:
Q  494 aaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttagtgg-tcaaaactactattaagcc 592  Q
    |||| ||||| ||||||  || ||||||||||||||| ||| ||| | ||||||| |||||||||||||||| |||| ||  |||||||||| |||||||    
T  39384542 aaaaagggcagtacttagggggctggattgtattttattttattaggaggccaaattcgcaacttcctgatacttaggggaccaaaactactgttaagcc 39384641  T
Q  593 t 593  Q
    |    
T  39384642 t 39384642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 520 - 589
Target Start/End: Original strand, 29816413 - 29816482
Alignment:
Q  520 attgtattttaatttgttatggggccaaaatcgcaacttcctgatattt-agtggtcaaaactactattaa 589  Q
    ||||||||||| ||||||  ||| |||||||||||||||| |||||||| || ||||||||||||||||||    
T  29816413 attgtattttattttgttg-gggaccaaaatcgcaacttcttgatatttaaggggtcaaaactactattaa 29816482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 593
Target Start/End: Original strand, 367161 - 367234
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaacttcctgatatttagtgg-tcaaaactactattaagcct 593  Q
    |||||||||| ||||||| ||||||||||||||||| || ||| || ||| || |||||||| |||||||||||    
T  367161 ttgtattttattttgttagggggccaaaatcgcaacctcttgaaatataggggatcaaaactgctattaagcct 367234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 517 - 590
Target Start/End: Original strand, 39411891 - 39411963
Alignment:
Q  517 tggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttagtggtcaaaactactattaag 590  Q
    |||||||||||||| ||||||| |||| |||||||||||||| || ||| |||| |||||||||| | ||||||    
T  39411891 tggattgtattttattttgtta-ggggtcaaaatcgcaactttcttatacttaggggtcaaaactgcaattaag 39411963  T

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Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 494 - 593
Target Start/End: Complemental strand, 10532313 - 10532214
Alignment:
Q  494 aaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgatattta-gtggtcaaaactactattaagcc 592  Q
    ||||||||||| |||||  ||  |||||| ||||||| ||||||  |||| ||||||||||||||||| ||| ||| | |||||||||| ||||||||||    
T  10532313 aaaaggggcaaaacttagggggttggattatattttattttgttg-ggggtcaaaatcgcaacttcctaatacttagggggtcaaaactgctattaagcc 10532215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 516 - 570
Target Start/End: Original strand, 84257 - 84311
Alignment:
Q  516 ctggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttag 570  Q
    ||||||||||||||| |||||||  | |||||||| |||||||||||||| ||||    
T  84257 ctggattgtattttattttgttagagagccaaaattgcaacttcctgatacttag 84311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 516 - 593
Target Start/End: Original strand, 1406601 - 1406679
Alignment:
Q  516 ctggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttag-tggtcaaaactactattaagcct 593  Q
    ||||||||||||||| ||| ||| | || ||||||||||| ||||||||| ||||  || ||||| |||||||||||||    
T  1406601 ctggattgtattttattttattaggaggtcaaaatcgcaatttcctgatacttagagggccaaaaatactattaagcct 1406679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 496 - 570
Target Start/End: Original strand, 1484640 - 1484714
Alignment:
Q  496 aaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttag 570  Q
    |||||||| ||||||  || ||| ||||||||||| ||||||| |||| ||||||| ||||||||| ||| ||||    
T  1484640 aaggggcagtacttagggggctgaattgtattttactttgttagggggtcaaaatcacaacttcctaatacttag 1484714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 494 - 593
Target Start/End: Complemental strand, 29816215 - 29816118
Alignment:
Q  494 aaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgatattta-gtggtcaaaactactattaagcc 592  Q
    |||||| | ||||||||  || ||| ||||||||||| ||||||| ||||||||||   ||||||||||||| ||| | |||||||| | ||||||||||    
T  29816215 aaaaggagaaatacttatggggctgaattgtattttattttgttagggggccaaaa---caacttcctgatacttagggggtcaaaattgctattaagcc 29816119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 521 - 598
Target Start/End: Original strand, 31907934 - 31908012
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaacttcctgatattt-agtggtcaaaactactattaagccttataa 598  Q
    |||||||||| |||||||   | |||||||| |||||||||||||||| ||||| ||||||| ||||||| ||| ||||    
T  31907934 ttgtattttattttgttaaatgaccaaaatcacaacttcctgatatttaagtggccaaaactgctattaaccctaataa 31908012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 521 - 559
Target Start/End: Complemental strand, 37008289 - 37008251
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaacttc 559  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  37008289 ttgtattttattttgttagggggccaaaatcgcaacttc 37008251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 521 - 559
Target Start/End: Complemental strand, 50503773 - 50503735
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaacttc 559  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  50503773 ttgtattttaattagttagggggccaaaatcgcaacttc 50503735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 517 - 601
Target Start/End: Complemental strand, 83966 - 83881
Alignment:
Q  517 tggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttagt-ggtcaaaactactattaagccttataaata 601  Q
    |||||||||||||| ||||| | |||| |||||| |||| || || ||| ||||  |||||||||||||||||| |||| ||||||    
T  83966 tggattgtattttattttgtaagggggtcaaaattgcaattttctaatacttagaaggtcaaaactactattaaaccttttaaata 83881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 6606941 - 6606978
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  6606941 ttgtattttaattagttagggggccaaaatcgcaactt 6606978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 494 - 559
Target Start/End: Original strand, 10231091 - 10231156
Alignment:
Q  494 aaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttc 559  Q
    ||||||| || ||||||  |||||| ||||||||||| |||||||  |||||||||||| ||||||    
T  10231091 aaaagggacagtacttaggggactgaattgtattttattttgttagagggccaaaatcgaaacttc 10231156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 15911944 - 15911981
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  15911944 ttgtattttaattagttagggggccaaaatcgcaactt 15911981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 21932029 - 21932066
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  21932029 ttgtattttaattagttagggggccaaaatcgcaactt 21932066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 22182657 - 22182694
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  22182657 ttgtattttaattagttagggggccaaaatcgcaactt 22182694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 26932654 - 26932617
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  26932654 ttgtattttaattagttatgggaccaaaatcgcaactt 26932617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 493 - 570
Target Start/End: Complemental strand, 39384337 - 39384261
Alignment:
Q  493 taaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttag 570  Q
    ||||||||||  ||||||  || || |||||||||||| |||||||| ||| |||| |||||||||||||||| ||||    
T  39384337 taaaaggggcggtacttagggggcttgattgtattttattttgttat-gggtcaaactcgcaacttcctgatacttag 39384261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 40345572 - 40345609
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  40345572 ttgtattttattttgttatgaggccaaaatcgcaactt 40345609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 50591629 - 50591592
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  50591629 ttgtattttaattagttatgaggccaaaatcgcaactt 50591592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 52201437 - 52201400
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  52201437 ttgtattttaattagttagggggccaaaatcgcaactt 52201400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 494 - 593
Target Start/End: Complemental strand, 24432435 - 24432335
Alignment:
Q  494 aaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttagt-ggtcaaaactactattaagcc 592  Q
    |||||||||| ||||||  || ||||| ||||||||| ||| ||| || ||||||||||||||||| ||||| ||||| |||||||| | ||||||||||    
T  24432435 aaaaggggcagtacttagggggctggactgtattttatttttttagggagccaaaatcgcaacttcttgatacttagtgggtcaaaattgctattaagcc 24432336  T
Q  593 t 593  Q
    |    
T  24432335 t 24432335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 494 - 594
Target Start/End: Complemental strand, 35828448 - 35828347
Alignment:
Q  494 aaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgatattt-agtggtcaaaactactattaagcc 592  Q
    |||||||||  ||||||  || ||| ||||||||||  ||||||| | || |||||||||||||| ||||||||| || |||||||||| ||||||||||    
T  35828448 aaaaggggcggtacttagggggctgaattgtattttgttttgttaggaggtcaaaatcgcaactttctgatatttaagaggtcaaaactgctattaagcc 35828349  T
Q  593 tt 594  Q
    ||    
T  35828348 tt 35828347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 516 - 595
Target Start/End: Complemental strand, 27756342 - 27756262
Alignment:
Q  516 ctggattgtattttaatttgttatggggccaaaatcgcaacttcctgata-tttagtggtcaaaactactattaagcctta 595  Q
    ||||||||||||||| ||||||| |||||||||||||||||| ||| ||| || || || ||||||| |||||||| ||||    
T  27756342 ctggattgtattttattttgttagggggccaaaatcgcaactacctaatacttaaggggccaaaactgctattaagtctta 27756262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 494 - 592
Target Start/End: Complemental strand, 35793474 - 35793375
Alignment:
Q  494 aaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgatattta-gtggtcaaaactactattaagcc 592  Q
    ||||||| || ||||||| || ||| ||||||||||| ||||||| ||| | |||||||||||||||| | ||||| | || ||||||| ||||||||||    
T  35793474 aaaagggacagtacttaaggggctgaattgtattttattttgttaggggcctaaaatcgcaacttcctaaaatttagggggccaaaactgctattaagcc 35793375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 494 - 561
Target Start/End: Original strand, 43657810 - 43657877
Alignment:
Q  494 aaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcct 561  Q
    |||||||| ||||||||| |  ||| ||||||||||| ||||||| || |||||||||||||||||||    
T  43657810 aaaaggggaaatacttaaagagctgaattgtattttattttgttagggtgccaaaatcgcaacttcct 43657877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 521 - 559
Target Start/End: Complemental strand, 30283478 - 30283440
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaacttc 559  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  30283478 ttgtattttattttgttatggggccaaaatcgcaacttc 30283440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 494 - 558
Target Start/End: Complemental strand, 9477232 - 9477168
Alignment:
Q  494 aaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    |||||||||||||||||| || | |  |||||||||| ||||||| ||||| |||||||||||||    
T  9477232 aaaaggggcaatacttaaagggcagttttgtattttattttgttaaggggctaaaatcgcaactt 9477168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 521 - 559
Target Start/End: Original strand, 42438018 - 42438056
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaacttc 559  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  42438018 ttgtattttaattagttagggggccaaaatcgcaacttc 42438056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 9477432 - 9477469
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  9477432 ttgtattttattttgttagggggccaaaatcgcaactt 9477469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 20588396 - 20588433
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  20588396 ttgtattttaattagttagggggccaaaatcgcaactt 20588433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 29163172 - 29163135
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  29163172 ttgtattttaattagttagggggccaaaatcgcaactt 29163135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 36801642 - 36801605
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  36801642 ttgtattttaattagttaaggggccaaaatcgcaactt 36801605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 40139601 - 40139564
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  40139601 ttgtattttaattagttagggggccaaaatcgcaactt 40139564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 40790912 - 40790949
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  40790912 ttgtattttaattagttagggggccaaaatcgcaactt 40790949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 43724634 - 43724597
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  43724634 ttgtattttaattagttagggggccaaaatcgcaactt 43724597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 48925983 - 48925946
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  48925983 ttgtattttaattagttagggggccaaaatcgcaactt 48925946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 516 - 593
Target Start/End: Complemental strand, 13398458 - 13398384
Alignment:
Q  516 ctggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttagtggtcaaaactactattaagcct 593  Q
    ||||||||||||||| |||||||||   |||||||||||||||| |||||||||| || |||||||  ||||||||||    
T  13398458 ctggattgtattttattttgttatg---ccaaaatcgcaacttcttgatatttaggggacaaaactgttattaagcct 13398384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 494 - 565
Target Start/End: Original strand, 2164672 - 2164743
Alignment:
Q  494 aaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgata 565  Q
    ||||||| || ||||||  || ||||||||||||||| ||||||| || | |||||||||||||||||||||    
T  2164672 aaaagggacagtacttagggggctggattgtattttattttgttagggtgtcaaaatcgcaacttcctgata 2164743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 494 - 565
Target Start/End: Original strand, 2176305 - 2176376
Alignment:
Q  494 aaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgata 565  Q
    ||||||| || ||||||  || ||||||||||||||| ||||||| || | |||||||||||||||||||||    
T  2176305 aaaagggacagtacttagggggctggattgtattttattttgttagggtgtcaaaatcgcaacttcctgata 2176376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 494 - 570
Target Start/End: Complemental strand, 1614913 - 1614837
Alignment:
Q  494 aaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttag 570  Q
    |||| |||||||| |||  || ||||||||||||||| ||||||| | ||||| |||||||||||||| ||| ||||    
T  1614913 aaaatgggcaatatttagggggctggattgtattttattttgttaggaggccacaatcgcaacttcctaatacttag 1614837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 494 - 565
Target Start/End: Original strand, 12101672 - 12101743
Alignment:
Q  494 aaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgata 565  Q
    |||| ||||| ||||||  || ||||||||||||||| ||||||| | |||||||||| |||||| ||||||    
T  12101672 aaaaagggcagtacttagggggctggattgtattttattttgttaggaggccaaaatcacaactttctgata 12101743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 521 - 559
Target Start/End: Complemental strand, 11623231 - 11623193
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaacttc 559  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  11623231 ttgtattttaattagttagggggccaaaatcgcaacttc 11623193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 494 - 558
Target Start/End: Original strand, 1615014 - 1615078
Alignment:
Q  494 aaaaggggcaatacttaatggactggattgtattttaatttgtta-tggggccaaaatcgcaactt 558  Q
    |||||||||||||||||   | ||||||||||||||| |||||||  |||||||||||||||||||    
T  1615014 aaaaggggcaatacttaggtg-ctggattgtattttattttgttaggggggccaaaatcgcaactt 1615078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 2113037 - 2113000
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    |||||||||| || ||||||||||||||||||||||||    
T  2113037 ttgtattttagttagttatggggccaaaatcgcaactt 2113000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 4037110 - 4037073
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  4037110 ttgtattttaattagttagggggccaaaatcgcaactt 4037073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 493 - 570
Target Start/End: Complemental strand, 10088183 - 10088106
Alignment:
Q  493 taaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttag 570  Q
    ||||||||||| ||||||  || ||  ||||||||||| | ||||| ||||||||||||| |||| | ||||||||||    
T  10088183 taaaaggggcagtacttagagggctaaattgtattttattctgttagggggccaaaatcgtaactccgtgatatttag 10088106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 24119564 - 24119527
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  24119564 ttgtattttaattagttagggggccaaaatcgcaactt 24119527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 31175608 - 31175571
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  31175608 ttgtattttaattagttagggggccaaaatcgcaactt 31175571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 494 - 589
Target Start/End: Complemental strand, 30626682 - 30626587
Alignment:
Q  494 aaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttagtggtcaaaactactattaa 589  Q
    |||||||||| || |||  |||||| ||||||||||  ||||||| | |||||||||||||| ||||||||| |||| || ||||||| |||||||    
T  30626682 aaaaggggcagtatttaggggactgaattgtattttcttttgttaggaggccaaaatcgcaatttcctgatacttaggggccaaaactgctattaa 30626587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 505 - 579
Target Start/End: Complemental strand, 3369935 - 3369861
Alignment:
Q  505 tacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttagtggtcaaaa 579  Q
    ||||||| || ||| ||||||||||| ||||||| |||||||||||||||||||| ||||| |||| || |||||    
T  3369935 tacttaaggggctgaattgtattttattttgttagggggccaaaatcgcaacttcttgatacttagggggcaaaa 3369861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 520 - 558
Target Start/End: Original strand, 6289470 - 6289508
Alignment:
Q  520 attgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  6289470 attgtattttaattagttatggggccaaaatcgcaactt 6289508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 4049364 - 4049401
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  4049364 ttgtattttaattagttatggggccaaaatcgcaactt 4049401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 595
Target Start/End: Complemental strand, 11787136 - 11787060
Alignment:
Q  519 gattgtattttaatttgttatggggccaaaatcgcaacttcctgatattta-gtggtcaaaactactattaagcctta 595  Q
    |||||||||||| ||||| | ||||| ||||||||||||| |||||||||| | || ||||||| |||||||||||||    
T  11787136 gattgtattttattttgtcagggggc-aaaatcgcaactttctgatatttaggagggcaaaactgctattaagcctta 11787060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 519 - 595
Target Start/End: Complemental strand, 11799303 - 11799227
Alignment:
Q  519 gattgtattttaatttgttatggggccaaaatcgcaacttcctgatattta-gtggtcaaaactactattaagcctta 595  Q
    |||||||||||| ||||| | ||||| ||||||||||||| |||||||||| | || ||||||| |||||||||||||    
T  11799303 gattgtattttattttgtcagggggc-aaaatcgcaactttctgatatttaggagggcaaaactgctattaagcctta 11799227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 518 - 559
Target Start/End: Complemental strand, 16323052 - 16323011
Alignment:
Q  518 ggattgtattttaatttgttatggggccaaaatcgcaacttc 559  Q
    ||||||||||||| |||||||||||| |||||||||||||||    
T  16323052 ggattgtattttattttgttatggggtcaaaatcgcaacttc 16323011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 520 - 593
Target Start/End: Original strand, 30627014 - 30627088
Alignment:
Q  520 attgtattttaatttgttatggggccaaaatcgcaacttcctgatattta-gtggtcaaaactactattaagcct 593  Q
    ||||||||||| |||||||||||| |||||||| |||||  ||||| ||| | ||| |||||| |||||||||||    
T  30627014 attgtattttattttgttatggggtcaaaatcgtaactttttgatacttagggggtgaaaactgctattaagcct 30627088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 521 - 595
Target Start/End: Original strand, 49804338 - 49804412
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaacttcctgatatttagtggtcaaaactactattaagcctta 595  Q
    |||||||||| ||| ||| |||  ||||||||||||||| ||| || ||| |||||||| | |||||||||||||    
T  49804338 ttgtattttatttttttaggggatcaaaatcgcaacttcttgaaatataggggtcaaaattgctattaagcctta 49804412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 1186730 - 1186693
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  1186730 ttgtattttaattagttagggggccaaaatcgcaactt 1186693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 10308605 - 10308642
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  10308605 ttgtattttaattagttacggggccaaaatcgcaactt 10308642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 19725863 - 19725900
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  19725863 ttgtattttaattagttagggggccaaaatcgcaactt 19725900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 40489283 - 40489246
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  40489283 ttgtattttaattagttagggggccaaaatcgcaactt 40489246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 601
Target Start/End: Complemental strand, 47742303 - 47742222
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaacttcctgatattta-gtggtcaaaactactattaagccttataaata 601  Q
    ||||| |||| || |||| |||||||||||||||||||||||| |  || |||| ||||||| ||||||| ||| |||||||    
T  47742303 ttgtagtttatttagttagggggccaaaatcgcaacttcctgaaacataggtggacaaaactgctattaaacctaataaata 47742222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 589
Target Start/End: Complemental strand, 49000667 - 49000598
Alignment:
Q  520 attgtattttaatttgttatggggccaaaatcgcaacttcctgatatttagtggtcaaaactactattaa 589  Q
    ||||||||||| ||||||||| |   ||||||||||||| || |||||||   |||||||||||||||||    
T  49000667 attgtattttattttgttatgagaataaaatcgcaactttctaatatttaagagtcaaaactactattaa 49000598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 49869660 - 49869697
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  49869660 ttgtattttaattagttaaggggccaaaatcgcaactt 49869697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 55732929 - 55732966
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  55732929 ttgtattttaattagttagggggccaaaatcgcaactt 55732966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.000000000001; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 513 - 563
Target Start/End: Original strand, 22408780 - 22408830
Alignment:
Q  513 ggactggattgtattttaatttgttatggggccaaaatcgcaacttcctga 563  Q
    |||||||||||||||||| ||||||| |||| |||||||||||||||||||    
T  22408780 ggactggattgtattttattttgttagggggtcaaaatcgcaacttcctga 22408830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 520 - 593
Target Start/End: Complemental strand, 38498192 - 38498118
Alignment:
Q  520 attgtattttaatttgttatggggccaaaatcgcaacttcctgatattta-gtggtcaaaactactattaagcct 593  Q
    ||||||||||| ||| ||| ||||| ||||| |||||||||||||| ||| |||||||||||| |||||||||||    
T  38498192 attgtattttatttttttagggggcgaaaattgcaacttcctgatacttaggtggtcaaaactgctattaagcct 38498118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 494 - 593
Target Start/End: Complemental strand, 11167972 - 11167872
Alignment:
Q  494 aaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgata-tttagtggtcaaaactactattaagcc 592  Q
    |||||||||||||||||  || |||| ||||| |||| ||| ||| |||||||||||| ||| ||  ||||| || || |||||||||||||||||||||    
T  11167972 aaaaggggcaatacttagagggctgggttgtaatttattttcttagggggccaaaatcacaagtttgtgatacttaaggggtcaaaactactattaagcc 11167873  T
Q  593 t 593  Q
    |    
T  11167872 t 11167872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 519 - 565
Target Start/End: Complemental strand, 36501474 - 36501428
Alignment:
Q  519 gattgtattttaatttgttatggggccaaaatcgcaacttcctgata 565  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||||||    
T  36501474 gattgtattttattttgttaggggaccaaaatcgcaacttcctgata 36501428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 527 - 593
Target Start/End: Complemental strand, 20364748 - 20364681
Alignment:
Q  527 tttaatttgttatggggccaaaatcgcaacttcctgatattta-gtggtcaaaactactattaagcct 593  Q
    |||| ||||||| |||| ||||||||||||||||||||| ||| | || ||||||| |||||||||||    
T  20364748 tttattttgttagggggtcaaaatcgcaacttcctgatacttagggggacaaaactgctattaagcct 20364681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 516 - 570
Target Start/End: Complemental strand, 12166882 - 12166828
Alignment:
Q  516 ctggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttag 570  Q
    ||||||||||||||| ||||||| ||||| ||||| |||| ||| ||||||||||    
T  12166882 ctggattgtattttattttgttagggggctaaaattgcaatttcatgatatttag 12166828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 493 - 559
Target Start/End: Original strand, 34969111 - 34969177
Alignment:
Q  493 taaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttc 559  Q
    ||||||||||||||||||  || | |  ||||||| || ||||||||||| ||||||||||||||||    
T  34969111 taaaaggggcaatacttagggggcggttttgtattatattttgttatgggtccaaaatcgcaacttc 34969177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 521 - 559
Target Start/End: Original strand, 38163657 - 38163695
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaacttc 559  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  38163657 ttgtattttaattagttagggggccaaaatcgcaacttc 38163695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 540 - 570
Target Start/End: Original strand, 38498266 - 38498296
Alignment:
Q  540 ggggccaaaatcgcaacttcctgatatttag 570  Q
    |||||||||||||||||||||||||||||||    
T  38498266 ggggccaaaatcgcaacttcctgatatttag 38498296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 521 - 559
Target Start/End: Original strand, 42169408 - 42169446
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaacttc 559  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  42169408 ttgtattttaatttgttagggggctaaaatcgcaacttc 42169446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 8006254 - 8006291
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  8006254 ttgtattttaattaggtatggggccaaaatcgcaactt 8006291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 8714193 - 8714230
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  8714193 ttgtattttaattagttatggagccaaaatcgcaactt 8714230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Complemental strand, 10332028 - 10331991
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  10332028 ttgtattttaattagttttggggccaaaatcgcaactt 10331991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 39573767 - 39573804
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| || |||||||||||||||||||||    
T  39573767 ttgtattttaattagtaatggggccaaaatcgcaactt 39573804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 38; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 502 - 575
Target Start/End: Original strand, 161732 - 161805
Alignment:
Q  502 caatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttagtggtc 575  Q
    |||||||||| |||||||||||||||||| |||||||  ||||||||||| || ||| |||||| |||| ||||    
T  161732 caatacttaaaggactggattgtattttattttgttagagggccaaaatctcatcttactgatacttaggggtc 161805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 502 - 560
Target Start/End: Original strand, 162266 - 162324
Alignment:
Q  502 caatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcc 560  Q
    |||||||||| || ||| ||||||||||| ||||||| |||||||||||| || |||||    
T  162266 caatacttaaagggctgtattgtattttattttgttagggggccaaaatcacatcttcc 162324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1088 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1088
Description:

Target: scaffold1088; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 589
Target Start/End: Original strand, 2096 - 2180
Alignment:
Q  505 tacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttagtggtcaaaactactattaa 589  Q
    ||||||| || ||| ||||||||||| ||||||| ||||||||||||||||||| || ||  |||| || ||||||| |||||||    
T  2096 tacttaaggggctgaattgtattttattttgttagggggccaaaatcgcaactttctaatgcttagaggacaaaactgctattaa 2180  T

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Target: scaffold0286 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 494 - 565
Target Start/End: Complemental strand, 17737 - 17666
Alignment:
Q  494 aaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgata 565  Q
    ||||||| || ||||||  || ||||||||||||||| ||||||| || | |||||||||||||||||||||    
T  17737 aaaagggacagtacttagggggctggattgtattttattttgttagggtgtcaaaatcgcaacttcctgata 17666  T

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Target: scaffold0172 (Bit Score: 36; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 494 - 592
Target Start/End: Original strand, 9852 - 9950
Alignment:
Q  494 aaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgatattta-gtggtcaaaactactattaagcc 592  Q
    |||| ||||||||||||  || || |||||||||||| ||| ||| |||| ||||||||||||||||| ||||| | | |||||||||| ||||||||||    
T  9852 aaaatgggcaatacttagagggctagattgtattttattttatta-ggggtcaaaatcgcaacttcctaatattaagggggtcaaaactgctattaagcc 9950  T

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Target: scaffold0092 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 494 - 570
Target Start/End: Complemental strand, 37882 - 37807
Alignment:
Q  494 aaaaggggcaatacttaatggactggattgtattttaatttgttatggggccaaaatcgcaacttcctgatatttag 570  Q
    |||| ||||||||||||  || ||  ||||||||||| ||||||| |||| ||||||||||||||||||||| ||||    
T  37882 aaaaagggcaatacttagggggctaaattgtattttattttgtta-ggggtcaaaatcgcaacttcctgatacttag 37807  T

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Target: scaffold0854 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0854
Description:

Target: scaffold0854; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 521 - 559
Target Start/End: Original strand, 3369 - 3407
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaacttc 559  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  3369 ttgtattttaattagttagggggccaaaatcgcaacttc 3407  T

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Target: scaffold1301 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold1301
Description:

Target: scaffold1301; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 1289 - 1326
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  1289 ttgtattttaattagttagggggccaaaatcgcaactt 1326  T

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Target: scaffold0028 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 558
Target Start/End: Original strand, 32251 - 32288
Alignment:
Q  521 ttgtattttaatttgttatggggccaaaatcgcaactt 558  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  32251 ttgtattttaattagttagggggccaaaatcgcaactt 32288  T

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