View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8930_low_2 (Length: 651)

Name: NF8930_low_2
Description: NF8930
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8930_low_2
NF8930_low_2
[»] chr8 (6 HSPs)
chr8 (12-502)||(9379569-9380059)
chr8 (527-635)||(9380055-9380163)
chr8 (455-496)||(43208283-43208324)
chr8 (456-489)||(27120031-27120064)
chr8 (456-496)||(6950216-6950256)
chr8 (455-495)||(41336796-41336836)
[»] chr5 (6 HSPs)
chr5 (456-507)||(27565292-27565343)
chr5 (460-495)||(4273523-4273558)
chr5 (457-495)||(6725118-6725156)
chr5 (455-496)||(39257536-39257577)
chr5 (459-495)||(23137365-23137401)
chr5 (456-496)||(28981886-28981926)
[»] chr4 (3 HSPs)
chr4 (460-497)||(31059536-31059573)
chr4 (455-496)||(11802407-11802448)
chr4 (455-507)||(23525704-23525756)
[»] chr3 (6 HSPs)
chr3 (454-495)||(52324028-52324069)
chr3 (457-496)||(21574373-21574412)
chr3 (457-495)||(37308216-37308254)
chr3 (457-497)||(23785134-23785174)
chr3 (455-495)||(38975992-38976032)
chr3 (453-497)||(43116577-43116621)
[»] chr1 (7 HSPs)
chr1 (454-490)||(16322720-16322756)
chr1 (456-495)||(2035502-2035541)
chr1 (454-489)||(4768974-4769009)
chr1 (455-492)||(10131874-10131911)
chr1 (455-495)||(12477437-12477477)
chr1 (456-496)||(14128621-14128661)
chr1 (455-495)||(44936741-44936781)
[»] chr2 (3 HSPs)
chr2 (456-495)||(15171130-15171169)
chr2 (459-499)||(13864529-13864569)
chr2 (455-487)||(34005865-34005897)
[»] chr6 (6 HSPs)
chr6 (454-488)||(34404316-34404350)
chr6 (454-495)||(31461556-31461597)
chr6 (457-494)||(31807978-31808015)
chr6 (459-495)||(4247235-4247271)
chr6 (455-495)||(7713904-7713944)
chr6 (457-489)||(14340960-14340992)
[»] scaffold0426 (1 HSPs)
scaffold0426 (459-495)||(4026-4062)
[»] chr7 (1 HSPs)
chr7 (457-497)||(27481443-27481483)


Alignment Details
Target: chr8 (Bit Score: 483; Significance: 0; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 483; E-Value: 0
Query Start/End: Original strand, 12 - 502
Target Start/End: Original strand, 9379569 - 9380059
Alignment:
Q  12 catcagaaaatggaggaagaaacaaatgtgaggctgaggtgaaaccaagtccttcaatggaaagatcagaacatgtacttgatgttctatcagatgatga 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9379569 catcagaaaatggaggaagaaacaaatgtgaggctgaggtgaaaccaagtccttcaatggaaagatcagaacatgtacttgatgttctatcagatgatga 9379668  T
Q  112 cacaagcataaaagttgaatactttggtttagaagatgaaactggtcttatgaattttgctgaacatgctgatggttctttaacatcaccagaagattgg 211  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9379669 cacaagcataaaggttgaatactttggtttagaagatgaaactggtcttatgaattttgctgaacatgctgatggttctttaacatcaccagaagattgg 9379768  T
Q  212 agtgcttttgaatcaaatgatttattaggccaatcaagttgtgattatcaatggtgggacttttggtcttgaatgaaacagaggaggaaaatatgtgtgg 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9379769 agtgcttttgaatcaaatgatttattaggccaatcaagttgtgattatcaatggtgggacttttggtcttgaatgaaacagaggaggaaaatatgtgtgg 9379868  T
Q  312 aggaaatatatgcaaaatttatgatgttagaatcatcattgttttgttgaagaagttgtcagaggaaaatcaagggacattttgttttttgtacaacata 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9379869 aggaaatatatgcaaaatttatgatgttagaatcatcattgttttgttgaagaagttgtcagaggaaaatcaagggacattttgttttttgtacaacata 9379968  T
Q  412 atcattagtttgtaggaaatgattttcatctctgcggttcgatcttgtttggataaataacttaattaagtgcttatagtataaatagtta 502  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9379969 atcattagtttgtaggaaatgattttcatctctgcggttcgatcttgtttggataaataacttaattaagcgcttatagtataaatagtta 9380059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 527 - 635
Target Start/End: Original strand, 9380055 - 9380163
Alignment:
Q  527 agttataagctttgtaggctattctggagagtctatggaagtaagttacggacatctcataagctgttttgataggttcttcaaaattgttatacaagtg 626  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||| ||    
T  9380055 agttataagctttgtaggctattctggagagtctatggaagtaagttacggacatctcataagcagttttgaaaggttcttcaaaatagttatacaaatg 9380154  T
Q  627 cgtacaaat 635  Q
    |||||||||    
T  9380155 cgtacaaat 9380163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 455 - 496
Target Start/End: Complemental strand, 43208324 - 43208283
Alignment:
Q  455 cttgtttggataaataacttaattaagtgcttatagtataaa 496  Q
    |||||||| ||||| |||||||||||||||||||||||||||    
T  43208324 cttgtttgtataaacaacttaattaagtgcttatagtataaa 43208283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 489
Target Start/End: Complemental strand, 27120064 - 27120031
Alignment:
Q  456 ttgtttggataaataacttaattaagtgcttata 489  Q
    |||||||||||||||||||||||||||| |||||    
T  27120064 ttgtttggataaataacttaattaagtgtttata 27120031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 496
Target Start/End: Original strand, 6950216 - 6950256
Alignment:
Q  456 ttgtttggataaataacttaattaagtgcttatagtataaa 496  Q
    |||||| |||||| ||||||||||||||||||||| |||||    
T  6950216 ttgtttagataaacaacttaattaagtgcttatagcataaa 6950256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 495
Target Start/End: Complemental strand, 41336836 - 41336796
Alignment:
Q  455 cttgtttggataaataacttaattaagtgcttatagtataa 495  Q
    |||||||||||||| ||||||||||| ||||||||| ||||    
T  41336836 cttgtttggataaacaacttaattaattgcttatagcataa 41336796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000006; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 456 - 507
Target Start/End: Complemental strand, 27565343 - 27565292
Alignment:
Q  456 ttgtttggataaataacttaattaagtgcttatagtataaatagttaatata 507  Q
    ||||||||||||| | |||||||||| |||||||||||||||||||| ||||    
T  27565343 ttgtttggataaacagcttaattaagcgcttatagtataaatagttattata 27565292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 460 - 495
Target Start/End: Complemental strand, 4273558 - 4273523
Alignment:
Q  460 ttggataaataacttaattaagtgcttatagtataa 495  Q
    ||||||||| ||||||||||||||||||||||||||    
T  4273558 ttggataaacaacttaattaagtgcttatagtataa 4273523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 495
Target Start/End: Original strand, 6725118 - 6725156
Alignment:
Q  457 tgtttggataaataacttaattaagtgcttatagtataa 495  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  6725118 tgtttggataaataatttaattaagtgcttatagcataa 6725156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 496
Target Start/End: Complemental strand, 39257577 - 39257536
Alignment:
Q  455 cttgtttggataaataacttaattaagtgcttatagtataaa 496  Q
    |||||||||||||| |||||||||||| |||||||| |||||    
T  39257577 cttgtttggataaacaacttaattaagcgcttatagcataaa 39257536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 495
Target Start/End: Original strand, 23137365 - 23137401
Alignment:
Q  459 tttggataaataacttaattaagtgcttatagtataa 495  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  23137365 tttggataaacaacttaattgagtgcttatagtataa 23137401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 496
Target Start/End: Original strand, 28981886 - 28981926
Alignment:
Q  456 ttgtttggataaataacttaattaagtgcttatagtataaa 496  Q
    |||||||||||| |||||||||||| ||||||||| |||||    
T  28981886 ttgtttggataagtaacttaattaattgcttatagcataaa 28981926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000009; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 460 - 497
Target Start/End: Original strand, 31059536 - 31059573
Alignment:
Q  460 ttggataaataacttaattaagtgcttatagtataaat 497  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  31059536 ttggataaataacttaattaagtgcttttagtataaat 31059573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 496
Target Start/End: Original strand, 11802407 - 11802448
Alignment:
Q  455 cttgtttggataaataacttaattaagtgcttatagtataaa 496  Q
    ||||||| ||||||||||||||||||| | ||||||||||||    
T  11802407 cttgttttgataaataacttaattaagcgtttatagtataaa 11802448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 507
Target Start/End: Complemental strand, 23525756 - 23525704
Alignment:
Q  455 cttgtttggataaataacttaattaagtgcttatagtataaatagttaatata 507  Q
    |||||||||||||| | ||||||||||||||||||| ||| | | ||||||||    
T  23525756 cttgtttggataaacatcttaattaagtgcttatagcatagacacttaatata 23525704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000009; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 454 - 495
Target Start/End: Complemental strand, 52324069 - 52324028
Alignment:
Q  454 tcttgtttggataaataacttaattaagtgcttatagtataa 495  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  52324069 tcttgtttgtataaataacttaattaagtgcttatagcataa 52324028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 457 - 496
Target Start/End: Original strand, 21574373 - 21574412
Alignment:
Q  457 tgtttggataaataacttaattaagtgcttatagtataaa 496  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  21574373 tgtttggataaactacttaattaagtgcttatagtataaa 21574412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 457 - 495
Target Start/End: Complemental strand, 37308254 - 37308216
Alignment:
Q  457 tgtttggataaataacttaattaagtgcttatagtataa 495  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  37308254 tgtttggataaacaacttaattaagtgcttatagcataa 37308216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 457 - 497
Target Start/End: Original strand, 23785134 - 23785174
Alignment:
Q  457 tgtttggataaataacttaattaagtgcttatagtataaat 497  Q
    |||||| ||||| ||||||||||||||||||||| ||||||    
T  23785134 tgtttgcataaacaacttaattaagtgcttatagcataaat 23785174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 495
Target Start/End: Complemental strand, 38976032 - 38975992
Alignment:
Q  455 cttgtttggataaataacttaattaagtgcttatagtataa 495  Q
    ||||||||||||||||||||||| ||| |||||| ||||||    
T  38976032 cttgtttggataaataacttaatcaagcgcttatggtataa 38975992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 453 - 497
Target Start/End: Complemental strand, 43116621 - 43116577
Alignment:
Q  453 atcttgtttggataaataacttaattaagtgcttatagtataaat 497  Q
    |||||||||||||||| ||||||||| |||| |||||| ||||||    
T  43116621 atcttgtttggataaacaacttaatttagtgtttatagcataaat 43116577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000004; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 454 - 490
Target Start/End: Original strand, 16322720 - 16322756
Alignment:
Q  454 tcttgtttggataaataacttaattaagtgcttatag 490  Q
    ||||||||||||||| |||||||||||||||||||||    
T  16322720 tcttgtttggataaacaacttaattaagtgcttatag 16322756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 495
Target Start/End: Complemental strand, 2035541 - 2035502
Alignment:
Q  456 ttgtttggataaataacttaattaagtgcttatagtataa 495  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  2035541 ttgtttggataaataacttaattaagcacttatagtataa 2035502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 489
Target Start/End: Complemental strand, 4769009 - 4768974
Alignment:
Q  454 tcttgtttggataaataacttaattaagtgcttata 489  Q
    |||||||||||||||||||||||||||| |||||||    
T  4769009 tcttgtttggataaataacttaattaagcgcttata 4768974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 455 - 492
Target Start/End: Original strand, 10131874 - 10131911
Alignment:
Q  455 cttgtttggataaataacttaattaagtgcttatagta 492  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  10131874 cttgtttggataaatgacttaattaagggcttatagta 10131911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 495
Target Start/End: Complemental strand, 12477477 - 12477437
Alignment:
Q  455 cttgtttggataaataacttaattaagtgcttatagtataa 495  Q
    |||||||||||||| ||||||||||||| || |||||||||    
T  12477477 cttgtttggataaacaacttaattaagttctgatagtataa 12477437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 496
Target Start/End: Complemental strand, 14128661 - 14128621
Alignment:
Q  456 ttgtttggataaataacttaattaagtgcttatagtataaa 496  Q
    ||||||||||||| ||||||| ||| |||||||||||||||    
T  14128661 ttgtttggataaacaacttaaataaatgcttatagtataaa 14128621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 495
Target Start/End: Complemental strand, 44936781 - 44936741
Alignment:
Q  455 cttgtttggataaataacttaattaagtgcttatagtataa 495  Q
    ||||| |||||||| ||||||||||| ||||||||||||||    
T  44936781 cttgtatggataaacaacttaattaaatgcttatagtataa 44936741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 32; Significance: 0.00000001; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 456 - 495
Target Start/End: Original strand, 15171130 - 15171169
Alignment:
Q  456 ttgtttggataaataacttaattaagtgcttatagtataa 495  Q
    |||||||||||||||||||||||||||| |||||| ||||    
T  15171130 ttgtttggataaataacttaattaagtgtttatagcataa 15171169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 499
Target Start/End: Original strand, 13864529 - 13864569
Alignment:
Q  459 tttggataaataacttaattaagtgcttatagtataaatag 499  Q
    |||||||||  ||||||||||| ||||||||||||||||||    
T  13864529 tttggataagcaacttaattaattgcttatagtataaatag 13864569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 487
Target Start/End: Original strand, 34005865 - 34005897
Alignment:
Q  455 cttgtttggataaataacttaattaagtgctta 487  Q
    |||||||||||||| ||||||||||||||||||    
T  34005865 cttgtttggataaacaacttaattaagtgctta 34005897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 31; Significance: 0.00000006; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 454 - 488
Target Start/End: Original strand, 34404316 - 34404350
Alignment:
Q  454 tcttgtttggataaataacttaattaagtgcttat 488  Q
    ||||||||||||||| |||||||||||||||||||    
T  34404316 tcttgtttggataaacaacttaattaagtgcttat 34404350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 495
Target Start/End: Original strand, 31461556 - 31461597
Alignment:
Q  454 tcttgtttggataaataacttaattaagtgcttatagtataa 495  Q
    |||||||||| |||| |||||||||||||||||||| |||||    
T  31461556 tcttgtttggttaaacaacttaattaagtgcttatattataa 31461597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 494
Target Start/End: Complemental strand, 31808015 - 31807978
Alignment:
Q  457 tgtttggataaataacttaattaagtgcttatagtata 494  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  31808015 tgtttggataaacaacttaattaagtgcttatggtata 31807978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 495
Target Start/End: Complemental strand, 4247271 - 4247235
Alignment:
Q  459 tttggataaataacttaattaagtgcttatagtataa 495  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  4247271 tttggataaacaacttaattaagtgcttatagcataa 4247235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 455 - 495
Target Start/End: Original strand, 7713904 - 7713944
Alignment:
Q  455 cttgtttggataaataacttaattaagtgcttatagtataa 495  Q
    |||||||||||||| |||||||||| |||||||||| ||||    
T  7713904 cttgtttggataaagaacttaattacgtgcttatagcataa 7713944  T

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Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 457 - 489
Target Start/End: Complemental strand, 14340992 - 14340960
Alignment:
Q  457 tgtttggataaataacttaattaagtgcttata 489  Q
    |||||||||||| ||||||||||||||||||||    
T  14340992 tgtttggataaacaacttaattaagtgcttata 14340960  T

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Target: scaffold0426 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 459 - 495
Target Start/End: Original strand, 4026 - 4062
Alignment:
Q  459 tttggataaataacttaattaagtgcttatagtataa 495  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  4026 tttggataaacaacttaattgagtgcttatagtataa 4062  T

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Target: chr7 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 457 - 497
Target Start/End: Complemental strand, 27481483 - 27481443
Alignment:
Q  457 tgtttggataaataacttaattaagtgcttatagtataaat 497  Q
    |||||||||||| |||||||||| |||||||||| ||||||    
T  27481483 tgtttggataaacaacttaattaggtgcttatagcataaat 27481443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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