View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8931_low_38 (Length: 276)
Name: NF8931_low_38
Description: NF8931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8931_low_38 |
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Alignment Details
Target: chr4 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 19 - 240
Target Start/End: Original strand, 7353857 - 7354078
Alignment:
| Q |
19 |
atcagatcagggacaagtgaaatatggtaaaattatctaaagagctctcatcaggaaaattgtaacaatcatgttggtgtctccacaaacattatgagta |
118 |
Q |
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| T |
7353857 |
atcagatcagggacaagtgaaatatggtaaaattatctaaagagctctcatcaggaaaaatgtaacaatcatgttggtgtctccacaaacattatgagta |
7353956 |
T |
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| Q |
119 |
tttatggctggatgactaagtgcaagtatgcatggatcaagagttacagtataaaaagattgatgccatagggactgagcagctattgcttcatttaact |
218 |
Q |
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| T |
7353957 |
tttatggctggatgactaagtgcaagtatgcacggatcaagagttacaatataaaaagattgatgccatagggactgagcagctattgcttcatttaact |
7354056 |
T |
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| Q |
219 |
ttctagtagaaaatttgattgc |
240 |
Q |
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||||||||||||| |||||||| |
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| T |
7354057 |
ttctagtagaaaacttgattgc |
7354078 |
T |
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