View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8931_low_40 (Length: 275)
Name: NF8931_low_40
Description: NF8931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8931_low_40 |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 16 - 262
Target Start/End: Complemental strand, 45404523 - 45404277
Alignment:
| Q |
16 |
acatttatttaagagagaaaggggcaaatattttgtgaattatatatttttagggtagatcattttgatttggtaatgcacatttagatgacttgaattg |
115 |
Q |
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| T |
45404523 |
acatttatttaagagagaaaggggcaaatattttgtgaattatatatttttagggtaggtcattttgatttggtaatgcacatttagatgacttgaattg |
45404424 |
T |
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| Q |
116 |
gttctattactacctcaacatttgtcttaatatttatgtgtttcaaatagcgccgtaagcaacaataaactaatgaccattaagagttttacatatttca |
215 |
Q |
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| T |
45404423 |
gttctattattacctcaacatttatcttaatatttatgtgtttcaaagagcgccgtaagcaacaataaactaatgaccattaagagttttacatacttca |
45404324 |
T |
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| Q |
216 |
attacatcagaagttttaaaatgttaggtttgaatcgtcgtttttat |
262 |
Q |
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| T |
45404323 |
attacatcagaagttttaaagtgttgggtttgaatcgtcgcttttat |
45404277 |
T |
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