View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8931_low_8 (Length: 560)

Name: NF8931_low_8
Description: NF8931
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8931_low_8
NF8931_low_8
[»] chr6 (16 HSPs)
chr6 (18-283)||(4372445-4372712)
chr6 (282-550)||(33045544-33045805)
chr6 (283-436)||(29924979-29925132)
chr6 (282-436)||(2281155-2281309)
chr6 (445-547)||(33004691-33004793)
chr6 (283-437)||(24458870-24459024)
chr6 (283-437)||(33004504-33004659)
chr6 (445-547)||(24458736-24458838)
chr6 (445-547)||(29369432-29369534)
chr6 (445-547)||(29371987-29372089)
chr6 (445-550)||(2281017-2281122)
chr6 (445-530)||(349256-349341)
chr6 (340-437)||(29371859-29371956)
chr6 (283-437)||(29369246-29369400)
chr6 (282-436)||(349374-349526)
chr6 (445-521)||(29924870-29924946)
[»] chr1 (36 HSPs)
chr1 (281-550)||(42496671-42496933)
chr1 (280-550)||(9533963-9534226)
chr1 (283-550)||(7480587-7480847)
chr1 (282-436)||(2047232-2047386)
chr1 (283-436)||(36866644-36866797)
chr1 (282-436)||(49787091-49787245)
chr1 (283-436)||(13926035-13926188)
chr1 (282-436)||(2044981-2045135)
chr1 (283-436)||(50709088-50709241)
chr1 (283-437)||(36461624-36461779)
chr1 (283-437)||(38210726-38210881)
chr1 (280-437)||(45501017-45501175)
chr1 (283-436)||(48651230-48651382)
chr1 (445-550)||(2047419-2047524)
chr1 (445-550)||(36866830-36866935)
chr1 (281-437)||(48960937-48961093)
chr1 (445-550)||(29245529-29245634)
chr1 (445-550)||(45501207-45501312)
chr1 (283-437)||(15691684-15691838)
chr1 (445-547)||(15691550-15691652)
chr1 (445-547)||(38210913-38211015)
chr1 (445-547)||(48960804-48960906)
chr1 (445-550)||(49787276-49787381)
chr1 (445-550)||(2045168-2045273)
chr1 (445-548)||(45503452-45503555)
chr1 (445-547)||(13926221-13926323)
chr1 (445-542)||(39513175-39513272)
chr1 (445-550)||(50708950-50709055)
chr1 (445-549)||(48651094-48651197)
chr1 (453-547)||(26211732-26211826)
chr1 (317-436)||(29245667-29245786)
chr1 (283-437)||(39512988-39513143)
chr1 (341-436)||(45503325-45503419)
chr1 (355-436)||(26211866-26211947)
chr1 (281-310)||(8998870-8998899)
chr1 (280-317)||(23085897-23085934)
[»] scaffold0097 (5 HSPs)
scaffold0097 (282-550)||(40208-40469)
scaffold0097 (282-436)||(48827-48981)
scaffold0097 (283-436)||(51652-51804)
scaffold0097 (445-549)||(51837-51940)
scaffold0097 (445-550)||(49014-49119)
[»] chr5 (13 HSPs)
chr5 (282-550)||(34761340-34761601)
chr5 (282-550)||(39878174-39878435)
chr5 (283-550)||(23184079-23184339)
chr5 (283-550)||(23188346-23188606)
chr5 (281-550)||(12655294-12655555)
chr5 (282-436)||(30090086-30090240)
chr5 (282-436)||(3607671-3607825)
chr5 (282-436)||(20104827-20104981)
chr5 (445-550)||(30090273-30090378)
chr5 (445-550)||(3607858-3607963)
chr5 (445-550)||(20105014-20105118)
chr5 (282-436)||(32675109-32675264)
chr5 (445-550)||(32674972-32675076)
[»] chr2 (45 HSPs)
chr2 (278-550)||(184208-184473)
chr2 (281-550)||(2449442-2449704)
chr2 (282-550)||(975850-976108)
chr2 (282-436)||(6123926-6124080)
chr2 (282-436)||(13905541-13905695)
chr2 (282-436)||(25647726-25647881)
chr2 (283-436)||(2301031-2301185)
chr2 (281-436)||(1512986-1513141)
chr2 (283-438)||(35431907-35432063)
chr2 (282-436)||(207960-208113)
chr2 (283-436)||(26456120-26456273)
chr2 (283-436)||(40605582-40605735)
chr2 (285-437)||(1916543-1916696)
chr2 (282-437)||(19822116-19822271)
chr2 (282-437)||(19842337-19842492)
chr2 (282-436)||(21588876-21589030)
chr2 (282-437)||(36437374-36437530)
chr2 (283-437)||(27997223-27997378)
chr2 (283-437)||(28098593-28098748)
chr2 (283-436)||(5013301-5013453)
chr2 (445-542)||(25647596-25647693)
chr2 (445-550)||(27997410-27997515)
chr2 (445-550)||(28098780-28098885)
chr2 (283-436)||(13908474-13908628)
chr2 (445-547)||(1916728-1916830)
chr2 (445-547)||(20890758-20890860)
chr2 (445-547)||(36437562-36437664)
chr2 (445-542)||(2300901-2300998)
chr2 (445-550)||(13905404-13905508)
chr2 (285-437)||(42109205-42109357)
chr2 (281-436)||(1273147-1273311)
chr2 (283-437)||(20890892-20891046)
chr2 (445-550)||(6123787-6123893)
chr2 (445-547)||(19821982-19822084)
chr2 (445-547)||(19842203-19842305)
chr2 (445-550)||(207822-207927)
chr2 (445-530)||(1273029-1273114)
chr2 (445-550)||(1512848-1512953)
chr2 (445-542)||(13908344-13908441)
chr2 (445-550)||(40605444-40605549)
chr2 (445-542)||(42109389-42109486)
chr2 (445-550)||(35432094-35432200)
chr2 (445-550)||(5013486-5013591)
chr2 (445-550)||(26455982-26456087)
chr2 (281-317)||(12008477-12008513)
[»] chr3 (45 HSPs)
chr3 (283-550)||(26947936-26948196)
chr3 (283-436)||(29864559-29864712)
chr3 (282-436)||(4594338-4594492)
chr3 (283-436)||(13454616-13454769)
chr3 (283-436)||(16651646-16651799)
chr3 (283-436)||(12261054-12261207)
chr3 (283-433)||(12825429-12825579)
chr3 (283-436)||(18198929-18199082)
chr3 (283-436)||(36946889-36947043)
chr3 (283-436)||(38655655-38655809)
chr3 (283-436)||(36087324-36087476)
chr3 (282-436)||(35716535-35716688)
chr3 (283-436)||(26951733-26951886)
chr3 (283-436)||(31487449-31487601)
chr3 (283-437)||(47726847-47727001)
chr3 (280-437)||(860060-860218)
chr3 (283-436)||(36091161-36091314)
chr3 (283-436)||(49562143-49562295)
chr3 (445-550)||(16651508-16651613)
chr3 (445-550)||(36947076-36947181)
chr3 (283-430)||(854809-854955)
chr3 (282-437)||(43508613-43508768)
chr3 (445-550)||(4594200-4594305)
chr3 (445-550)||(12825288-12825393)
chr3 (445-550)||(13454802-13454907)
chr3 (445-550)||(18198791-18198896)
chr3 (284-436)||(33003622-33003774)
chr3 (445-547)||(11826567-11826669)
chr3 (445-550)||(52418714-52418819)
chr3 (445-550)||(12260915-12261021)
chr3 (445-547)||(33003804-33003906)
chr3 (445-550)||(26951595-26951700)
chr3 (445-550)||(35716397-35716502)
chr3 (445-550)||(38655842-38655947)
chr3 (283-437)||(11826701-11826855)
chr3 (445-547)||(859926-860028)
chr3 (445-550)||(36087509-36087614)
chr3 (445-550)||(49562328-49562433)
chr3 (445-550)||(854663-854768)
chr3 (445-548)||(31487314-31487416)
chr3 (445-547)||(36091347-36091449)
chr3 (340-436)||(52418585-52418681)
chr3 (283-357)||(15081768-15081842)
chr3 (445-485)||(47726776-47726816)
chr3 (274-317)||(53926337-53926380)
[»] chr7 (32 HSPs)
chr7 (283-550)||(7888941-7889201)
chr7 (280-436)||(27716155-27716310)
chr7 (282-436)||(17697127-17697281)
chr7 (282-436)||(16720113-16720267)
chr7 (283-436)||(45116042-45116195)
chr7 (283-436)||(26169056-26169209)
chr7 (282-436)||(20955491-20955645)
chr7 (282-436)||(29956689-29956844)
chr7 (282-436)||(32660436-32660589)
chr7 (280-437)||(46909558-46909716)
chr7 (283-436)||(7893969-7894122)
chr7 (283-437)||(13398146-13398301)
chr7 (282-437)||(5093781-5093937)
chr7 (445-550)||(29956551-29956656)
chr7 (281-435)||(22007193-22007348)
chr7 (283-430)||(32038663-32038809)
chr7 (445-542)||(31100220-31100317)
chr7 (445-547)||(13398333-13398435)
chr7 (445-547)||(20955678-20955780)
chr7 (445-550)||(7893831-7893936)
chr7 (445-550)||(22007054-22007159)
chr7 (445-550)||(26168918-26169023)
chr7 (445-550)||(27716018-27716122)
chr7 (445-550)||(32660298-32660403)
chr7 (445-549)||(45115905-45116009)
chr7 (445-550)||(17696989-17697094)
chr7 (445-550)||(16719974-16720080)
chr7 (283-436)||(31100350-31100504)
chr7 (445-550)||(32038517-32038622)
chr7 (445-547)||(5093647-5093749)
chr7 (445-547)||(46909425-46909526)
chr7 (283-319)||(39703883-39703919)
[»] chr4 (27 HSPs)
chr4 (281-436)||(21581349-21581504)
chr4 (282-436)||(25839531-25839686)
chr4 (283-436)||(19514961-19515114)
chr4 (280-436)||(28389616-28389772)
chr4 (282-436)||(16909269-16909423)
chr4 (282-436)||(30387763-30387916)
chr4 (282-436)||(52682946-52683100)
chr4 (279-436)||(21382862-21383018)
chr4 (282-436)||(41859605-41859759)
chr4 (280-436)||(29358944-29359100)
chr4 (281-437)||(53288521-53288678)
chr4 (283-437)||(42347951-42348106)
chr4 (445-547)||(42347817-42347919)
chr4 (445-542)||(25839401-25839498)
chr4 (283-437)||(31448188-31448342)
chr4 (445-550)||(16909131-16909236)
chr4 (445-550)||(28389478-28389583)
chr4 (445-550)||(52682808-52682913)
chr4 (445-550)||(19515147-19515252)
chr4 (445-550)||(21581537-21581642)
chr4 (445-550)||(30387949-30388054)
chr4 (445-549)||(21382726-21382829)
chr4 (448-547)||(31448379-31448480)
chr4 (445-547)||(53288387-53288489)
chr4 (445-542)||(41859792-41859889)
chr4 (445-547)||(29359133-29359235)
chr4 (279-317)||(49748214-49748252)
[»] scaffold0642 (2 HSPs)
scaffold0642 (282-436)||(3611-3765)
scaffold0642 (445-550)||(3473-3578)
[»] scaffold0345 (2 HSPs)
scaffold0345 (282-436)||(13523-13677)
scaffold0345 (445-550)||(13385-13490)
[»] scaffold0105 (2 HSPs)
scaffold0105 (282-436)||(25304-25458)
scaffold0105 (445-550)||(25491-25596)
[»] chr8 (26 HSPs)
chr8 (282-436)||(405896-406050)
chr8 (283-436)||(18265734-18265888)
chr8 (283-436)||(18274747-18274901)
chr8 (283-436)||(19961841-19961994)
chr8 (280-436)||(23827972-23828128)
chr8 (285-436)||(21640092-21640242)
chr8 (445-550)||(18265921-18266026)
chr8 (445-550)||(18274934-18275039)
chr8 (282-437)||(18492511-18492666)
chr8 (283-436)||(14994215-14994366)
chr8 (282-436)||(22729620-22729773)
chr8 (282-436)||(41376154-41376307)
chr8 (445-550)||(406083-406188)
chr8 (445-547)||(18492378-18492480)
chr8 (445-550)||(23827834-23827939)
chr8 (282-438)||(24011590-24011746)
chr8 (281-437)||(37983178-37983334)
chr8 (445-547)||(24011775-24011877)
chr8 (445-547)||(37983366-37983468)
chr8 (445-550)||(14994399-14994504)
chr8 (445-542)||(41376340-41376437)
chr8 (445-550)||(19961703-19961808)
chr8 (445-542)||(22729806-22729903)
chr8 (445-513)||(21639991-21640059)
chr8 (282-310)||(18272788-18272816)
chr8 (282-310)||(34893023-34893051)
[»] scaffold0374 (2 HSPs)
scaffold0374 (279-437)||(2182-2340)
scaffold0374 (445-550)||(2045-2150)
[»] scaffold0119 (4 HSPs)
scaffold0119 (281-436)||(34189-34345)
scaffold0119 (281-436)||(27780-27944)
scaffold0119 (445-530)||(27977-28062)
scaffold0119 (444-530)||(34377-34463)
[»] scaffold0121 (2 HSPs)
scaffold0121 (445-550)||(45651-45756)
scaffold0121 (283-436)||(45789-45944)


Alignment Details
Target: chr6 (Bit Score: 245; Significance: 1e-135; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 18 - 283
Target Start/End: Complemental strand, 4372712 - 4372445
Alignment:
Q  18 aatgaaaagaacatgaaactaaacaaaaaagtgacctttaagagtgcatgaaaaaag--gtgttacgtacattttcttagtctggtttttgctaaccgag 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||| |||||||||||||||||||    
T  4372712 aatgaaaagaacatgaaactaaacaaaaaagtgacctttaagagtgcatgaaaaaagaggtgctacgtacattttcttagcctggtttttgctaaccgag 4372613  T
Q  116 taatgagaaacgaaaaggagagattctgagcaataaagaaaggaagaacatcgatgatttgggacaaacaaagaccgaagtatcatcgtcttgcagatta 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4372612 taatgagaaacgaaaaggagagattctgagcaataaagaaaggaagaacatcgatgatttgggacaaacaaagaccgaagtatcatcgtcttgcagatta 4372513  T
Q  216 ctttactgaaatatgaagttgtctagggtttccacttctccatacttccaaatttctttaaagtaaaa 283  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4372512 ctttactgaaatatgaagttgtatagggtttccacttctccatacttccaaatttctttaaagtaaaa 4372445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 282 - 550
Target Start/End: Original strand, 33045544 - 33045805
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaa-aattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  33045544 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaaattaatactcactgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 33045643  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta-aacacaattaattttaaaagggaaactgaagtttgttgacatg 479  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||  | ||  | |         |||||||||| |||||||||    
T  33045644 gtgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcctat---------aactgaagttcgttgacatg 33045734  T
Q  480 caaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatttctctg 550  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||    
T  33045735 caaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctg 33045805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 283 - 436
Target Start/End: Complemental strand, 29925132 - 29924979
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcgt 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29925132 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcactgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcgt 29925033  T
Q  383 gaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29925032 gaatcaaagcaaaatgtcaattaccataggctttgttattgttccataattcta 29924979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 282 - 436
Target Start/End: Complemental strand, 2281309 - 2281155
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||| ||| ||||||||||||||| |||||||||| ||||| |||||||||||    
T  2281309 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaagataatattcactgaaaaaataagacattgtagttcgcgtgaatctaaaaattgtc 2281210  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  2281209 gtgaatcaaagcaaaatgtcaa-taccaaagactttgttattgttccataattcta 2281155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 445 - 547
Target Start/End: Original strand, 33004691 - 33004793
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  33004691 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaact 33004790  T
Q  545 tct 547  Q
    |||    
T  33004791 tct 33004793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 283 - 437
Target Start/End: Complemental strand, 24459024 - 24458870
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||| |||||||||||| ||||||| || || ||| || |||| | |||||||| ||| |||||||||||||||||| |||||| |||    
T  24459024 actagaccattgacccatgctaacgcacgggtcattttaagaagtaaatattcat-gtaaaaataaaacaatgtagttcgcttgaatgttaaaattttcg 24458926  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  24458925 tgaatcaaagcataatgtcaattacgatagactttgttattgttccataattctaa 24458870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 283 - 437
Target Start/End: Original strand, 33004504 - 33004659
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||| ||||||| ||||  |||||| || || ||| || ||| || |||||||| ||| |||||| ||||||||||||||||||||||    
T  33004504 actagaccattgacccatgctaacacacggttcattttaagaagtaaatattcactgtaaaaataaaacaatgtagtgcgcttgaatgtaaaaattgtcg 33004603  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  33004604 tgaatcaaagcataatgtcaattacgatagactttgttattgttccataattctaa 33004659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 445 - 547
Target Start/End: Complemental strand, 24458838 - 24458736
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |    
T  24458838 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcatacacattacggaaaact 24458739  T
Q  545 tct 547  Q
    |||    
T  24458738 tct 24458736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 445 - 547
Target Start/End: Original strand, 29369432 - 29369534
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  29369432 taattttaaaagggaaactgaagttcgttgacatgcaaataatttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaact 29369531  T
Q  545 tct 547  Q
    |||    
T  29369532 tct 29369534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 445 - 547
Target Start/End: Original strand, 29371987 - 29372089
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  29371987 taattttaaaagggaaactgaagttcgttgacatgcaaataatttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaact 29372086  T
Q  545 tct 547  Q
    |||    
T  29372087 tct 29372089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 2281122 - 2281017
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  2281122 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaact 2281023  T
Q  545 tctctg 550  Q
    ||||||    
T  2281022 tctctg 2281017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 445 - 530
Target Start/End: Complemental strand, 349341 - 349256
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctaca 530  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  349341 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctaca 349256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 340 - 437
Target Start/End: Original strand, 29371859 - 29371956
Alignment:
Q  340 aaaaataagacactgtagttcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  29371859 aaaaataaaacaatgtagttcgcttgaatgtaaaaattgtcgtgaatcaaagcataatgtcaattacgatagactttgttattgttccataattctaa 29371956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 283 - 437
Target Start/End: Original strand, 29369246 - 29369400
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    ||||||||||| |||| |||||||||||| ||||||| || || ||| || |||  |  ||||||| ||| |||||||||||||||||||||||||||||    
T  29369246 actagaccattaacccatgctaacgcacgggtcattttaagaagtaaatattcac-gtcaaaataaaacaatgtagttcgcttgaatgtaaaaattgtcg 29369344  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    ||||||||| || |||||||||||  ||||||||||||||||||||||||||||||    
T  29369345 tgaatcaaaacataatgtcaattatgatagactttgttattgttccataattctaa 29369400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 282 - 436
Target Start/End: Complemental strand, 349526 - 349374
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaa-ttaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    |||||||||||||| |||||||||||||| | |||||| ||||| |||||| |||  | |||||||| | | ||||||||| |||||||||||||||||     
T  349526 aactagaccattgatccgtgctaacgcacatatcattttaaaaagttaatattcaccgtaaaaataaaataatgtagttcgattgaatgtaaaaattgt- 349428  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
      |||||||| || |||||||||||||||| |||||||||||||||||||||||||    
T  349427 --gaatcaaaacataatgtcaattaccatatactttgttattgttccataattcta 349374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 445 - 521
Target Start/End: Complemental strand, 29924946 - 29924870
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaa 521  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29924946 taattttaaaagggaaactgaaattcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaa 29924870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 168; Significance: 9e-90; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 281 - 550
Target Start/End: Complemental strand, 42496933 - 42496671
Alignment:
Q  281 aaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaa-ttaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgt 379  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  42496933 aaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaaattaatactcactgaaaaaataagacactgtagttcgcttgaatgtaaaaattgt 42496834  T
Q  380 cgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta-aacacaattaattttaaaagggaaactgaagtttgttgacat 478  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||  | ||  | |         |||||||||| ||||||||    
T  42496833 cgtgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcctat---------aactgaagttcgttgacat 42496743  T
Q  479 gcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatttctctg 550  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||    
T  42496742 gcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctg 42496671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 280 - 550
Target Start/End: Complemental strand, 9534226 - 9533963
Alignment:
Q  280 aaaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaa-ttaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattg 378  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  9534226 aaaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaaattaatactcactgaaaaaataagacactgtagtttgcttgaatgtaaaaattg 9534127  T
Q  379 tcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta-aacacaattaattttaaaagggaaactgaagtttgttgaca 477  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||  | ||  | |         |||||||||| |||||||    
T  9534126 tcgtgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcctat---------aactgaagttcgttgaca 9534036  T
Q  478 tgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatttctctg 550  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||    
T  9534035 tgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctg 9533963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 283 - 550
Target Start/End: Complemental strand, 7480847 - 7480587
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaa-ttaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  7480847 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaaattaatactcactgaaaaaataagacactgtagtttgcttgaatgtaaaaattgtcg 7480748  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta-aacacaattaattttaaaagggaaactgaagtttgttgacatgc 480  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||  | ||  | |         |||||||||| ||||||||||    
T  7480747 tgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcctat---------aactgaagttcgttgacatgc 7480657  T
Q  481 aaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatttctctg 550  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||    
T  7480656 aaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctg 7480587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 282 - 436
Target Start/End: Original strand, 2047232 - 2047386
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  2047232 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcactgaaaaaataaaacactgtagttcgcttgaatgtaaaaattgtcg 2047331  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2047332 tgaatcaaagcaaaatgttaattaccatagactttgttattgttccataattcta 2047386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 283 - 436
Target Start/End: Original strand, 36866644 - 36866797
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcgt 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  36866644 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcactgaaaaaataaaacactgtagttcgcttgaatgtaaaaattgtcgt 36866743  T
Q  383 gaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36866744 gaatcaaagcaaaatgttaattaccatagactttgttattgttccataattcta 36866797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 282 - 436
Target Start/End: Original strand, 49787091 - 49787245
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||    
T  49787091 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcactgaaaaaataagacactgtagtttgcttgaatataaaaattgtcg 49787190  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  49787191 tgaatcaaagcaaaatgccaattaccatagactttgttattgttccataattcta 49787245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 283 - 436
Target Start/End: Original strand, 13926035 - 13926188
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||| ||||| ||||||||||||    
T  13926035 actagaccattgatccgtgctaacacacgtgtcatttaaaaaatataatattcactgaaaaaataagacactgtagttcgcgtgaatctaaaaattgtcg 13926134  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  13926135 tgaattaaagcaaaatgtcaa-taccaaagactttgttattgttccataattcta 13926188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 282 - 436
Target Start/End: Original strand, 2044981 - 2045135
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  ||||| ||| |||||||||||||||||||||||||| ||||| |||||||||||    
T  2044981 aactagaccattgacccgtgctaacgcacatgtcatttaaaaaagataatattcactgaaaaaataagacactgtagttcgcgtgaatctaaaaattgtc 2045080  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||| |||||||| || || |||||||||||||||||||||||||||    
T  2045081 gtgaatcaaagcataatgtcaa-tatcaaagactttgttattgttccataattcta 2045135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 283 - 436
Target Start/End: Complemental strand, 50709241 - 50709088
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||| ||||| ||||||   | |    
T  50709241 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaagataatattcattgaaaaaataagacactgtagttcgcgtgaatctaaaaaaatttg 50709142  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  50709141 tgaatcaaagcaaaatgtcaa-taccaaagactttgttattgttccataattcta 50709088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 283 - 437
Target Start/End: Complemental strand, 36461779 - 36461624
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||| |||||||||||| ||||||| || || ||| || ||| || |||||||| ||| |||||||||||||||||||||||||||||    
T  36461779 actagaccattgacccatgctaacgcacgggtcattttaagaagtaaatattcactgtaaaaataaaacaatgtagttcgcttgaatgtaaaaattgtcg 36461680  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  36461679 tgaatcaaagcataatgtcaattacgatagactttgttattgttccataattctaa 36461624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 283 - 437
Target Start/End: Original strand, 38210726 - 38210881
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    ||||||||||||||||||||||||||||| ||||||| || || ||| || ||| || |||||||| ||| ||||||||| |||||||||||||||||||    
T  38210726 actagaccattgacccgtgctaacgcacgggtcattttaagaagtaaatattcactgtaaaaataaaacaatgtagttcgtttgaatgtaaaaattgtcg 38210825  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  38210826 tgaatcaaaacataatgtcaattaccatagactttgttattgttccataattctaa 38210881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 280 - 437
Target Start/End: Original strand, 45501017 - 45501175
Alignment:
Q  280 aaaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattg 378  Q
    ||||||||||||| |||||||||||||||||| ||||||| || || ||| || ||| || |||||||| ||| ||||||||| ||||||||||||||||    
T  45501017 aaaactagaccatggacccgtgctaacgcacgggtcattttaagaagtaaatattcactgtaaaaataaaacaatgtagttcgtttgaatgtaaaaattg 45501116  T
Q  379 tcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  45501117 tcatgaatcaaagcataatgtcaattaccatagactttgttattgttccataattctaa 45501175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 283 - 436
Target Start/End: Complemental strand, 48651382 - 48651230
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||| ||| | | |||||||||||||||||||||| ||||| ||||||||||||    
T  48651382 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaagataatattcact-ataaaataagacactgtagttcgcgtgaatctaaaaattgtcg 48651284  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  48651283 tgaatgaaagcaaaatgtcaa-taccaaagactttgttattgttccataattcta 48651230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 445 - 550
Target Start/End: Original strand, 2047419 - 2047524
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  2047419 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaact 2047518  T
Q  545 tctctg 550  Q
    ||||||    
T  2047519 tctctg 2047524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 445 - 550
Target Start/End: Original strand, 36866830 - 36866935
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  36866830 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaact 36866929  T
Q  545 tctctg 550  Q
    ||||||    
T  36866930 tctctg 36866935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 281 - 437
Target Start/End: Complemental strand, 48961093 - 48960937
Alignment:
Q  281 aaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgt 379  Q
    |||||||||||||||||| |||||||||||| ||||||| || || ||| || |||| | |||||||| ||| |||||||||||||||||||||||||||    
T  48961093 aaactagaccattgacccctgctaacgcacgggtcattttaagaagtaaatattcat-gtaaaaataaaacaatgtagttcgcttgaatgtaaaaattgt 48960995  T
Q  380 cgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    |||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||    
T  48960994 cgtgaatcaaagcataatgtcaattacgataaactttgttattgttccataattctaa 48960937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 29245634 - 29245529
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  29245634 taattttaaaagggaaactgaagttcgttgacatgcaaatagttttaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaact 29245535  T
Q  545 tctctg 550  Q
    ||||||    
T  29245534 tctctg 29245529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 445 - 550
Target Start/End: Original strand, 45501207 - 45501312
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  45501207 taattttaaaaggaaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaact 45501306  T
Q  545 tctctg 550  Q
    ||||||    
T  45501307 tctctg 45501312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 283 - 437
Target Start/End: Complemental strand, 15691838 - 15691684
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||| |||||||||||| ||||||| || || ||| || |||| | |||||||| ||| |||||||||||||||||| |||||| |||    
T  15691838 actagaccattgacccatgctaacgcacgggtcattttaagaagtaaatattcat-gtaaaaataaaacaatgtagttcgcttgaatgttaaaattttcg 15691740  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  15691739 tgaatcaaagcataatgtcaattacgatagactttgttattgttccataattctaa 15691684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 445 - 547
Target Start/End: Complemental strand, 15691652 - 15691550
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |    
T  15691652 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcatacacattacggaaaact 15691553  T
Q  545 tct 547  Q
    |||    
T  15691552 tct 15691550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 445 - 547
Target Start/End: Original strand, 38210913 - 38211015
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |    
T  38210913 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaact 38211012  T
Q  545 tct 547  Q
    |||    
T  38211013 tct 38211015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 445 - 547
Target Start/End: Complemental strand, 48960906 - 48960804
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  48960906 taattttaaaagggaaactgaagttcgttgacatgcaaataatttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaact 48960807  T
Q  545 tct 547  Q
    |||    
T  48960806 tct 48960804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 445 - 550
Target Start/End: Original strand, 49787276 - 49787381
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||| |    
T  49787276 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaatatgtaagaaaatgaagagtacacaaaaaagtcctacacattacggaaaact 49787375  T
Q  545 tctctg 550  Q
    ||||||    
T  49787376 tctctg 49787381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 445 - 550
Target Start/End: Original strand, 2045168 - 2045273
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |    
T  2045168 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaact 2045267  T
Q  545 tctctg 550  Q
    ||||||    
T  2045268 tctctg 2045273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 445 - 548
Target Start/End: Original strand, 45503452 - 45503555
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |    
T  45503452 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaact 45503551  T
Q  545 tctc 548  Q
    ||||    
T  45503552 tctc 45503555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 445 - 547
Target Start/End: Original strand, 13926221 - 13926323
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |    
T  13926221 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataaataagaaaatgaatagtacacaaaaaagtcctacacattacggaaaact 13926320  T
Q  545 tct 547  Q
    |||    
T  13926321 tct 13926323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 445 - 542
Target Start/End: Original strand, 39513175 - 39513272
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaa 542  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||    
T  39513175 taattttaaaaggaaaactgaagttcgttgacatgcaaatagtttcaataaataagaaaatgaacagtacacaaaaaagtcctacacattacggaaaa 39513272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 50709055 - 50708950
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||| |    
T  50709055 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaaaaagtaagaaaatgaatagtacacaaaaaagtcctacacattacagaaaact 50708956  T
Q  545 tctctg 550  Q
    ||||||    
T  50708955 tctctg 50708950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 445 - 549
Target Start/End: Complemental strand, 48651197 - 48651094
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |    
T  48651197 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacaca-aaaagtcctacacattacggaaaact 48651099  T
Q  545 tctct 549  Q
    |||||    
T  48651098 tctct 48651094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 453 - 547
Target Start/End: Complemental strand, 26211826 - 26211732
Alignment:
Q  453 aaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatttct 547  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||| ||||    
T  26211826 aaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatggtacacaaaaaagtcctatacattacggaaaacttct 26211732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 317 - 436
Target Start/End: Complemental strand, 29245786 - 29245667
Alignment:
Q  317 tttaaaaaattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgtcaattaccatagacttt 416  Q
    ||||| || |||||| ||| || |||||||| ||| |||||||||||||||| |||||||| |||||||||||| || ||||| ||||||||||||||||    
T  29245786 tttaagaagttaatattcactggaaaaataaaacaatgtagttcgcttgaatataaaaattatcgtgaatcaaaacataatgttaattaccatagacttt 29245687  T
Q  417 gttattgttccataattcta 436  Q
    ||||||||||||||||||||    
T  29245686 gttattgttccataattcta 29245667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 283 - 437
Target Start/End: Original strand, 39512988 - 39513143
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    ||||||||||||||||||||    ||||| ||||||| || || ||| || | | || |||||||| ||| | |||||||||||||||||||||||||||    
T  39512988 actagaccattgacccgtgcgttagcacgggtcattttaagaagtaaatatttactgtaaaaataaaacaatatagttcgcttgaatgtaaaaattgtcg 39513087  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    | ||||||| || | |||||||||||||||||||||||||||||||||||||||||    
T  39513088 taaatcaaaacatactgtcaattaccatagactttgttattgttccataattctaa 39513143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 341 - 436
Target Start/End: Original strand, 45503325 - 45503419
Alignment:
Q  341 aaaataagacactgtagttcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||    
T  45503325 aaaataagacactgtatttcgcgtgaatctaaaaattgtcgtgaatcaaagcaaaatgtcaa-taccaaagactttgttattgttctataattcta 45503419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 26211947 - 26211866
Alignment:
Q  355 tagttcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||| ||||||||||||||||| ||||| | || |||||||||||| |||||||||||||||||||||||||||||    
T  26211947 tagttcgcttaaatgtaaaaattgtcgtaaatcagatcataatgtcaattactatagactttgttattgttccataattcta 26211866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 310
Target Start/End: Complemental strand, 8998899 - 8998870
Alignment:
Q  281 aaactagaccattgacccgtgctaacgcac 310  Q
    ||||||||||||||||||||||||||||||    
T  8998899 aaactagaccattgacccgtgctaacgcac 8998870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 317
Target Start/End: Original strand, 23085897 - 23085934
Alignment:
Q  280 aaaactagaccattgacccgtgctaacgcacgtgtcat 317  Q
    ||||||||||||| |||||||||||||||||| |||||    
T  23085897 aaaactagaccatcgacccgtgctaacgcacgggtcat 23085934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 167; Significance: 3e-89; HSPs: 5)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 282 - 550
Target Start/End: Original strand, 40208 - 40469
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaa-aattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  40208 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaaattaatactcactgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 40307  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta-aacacaattaattttaaaagggaaactgaagtttgttgacatg 479  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||  | ||  | |         |||||||||| |||||||||    
T  40308 gtgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcctat---------aactgaagttcgttgacatg 40398  T
Q  480 caaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatttctctg 550  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||    
T  40399 caaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctg 40469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 282 - 436
Target Start/End: Original strand, 48827 - 48981
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||| ||| ||||||||||||||||||||||| || ||||| |||||||||||    
T  48827 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaagataatattcactgaaaaaataagacactgtagtttgcgtgaatctaaaaattgtc 48926  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||| |||||||| || || |||||||||||||||| ||||||||||    
T  48927 gtgaatcaaagcataatgtcaa-tatcaaagactttgttattgtttcataattcta 48981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 283 - 436
Target Start/End: Original strand, 51652 - 51804
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    ||||||||||||||||||||||| |||||||||||||||||||  ||||| ||| | |||||||||||||||||||||||| ||||| ||||| ||||||    
T  51652 actagaccattgacccgtgctaatgcacgtgtcatttaaaaaagataatattcact-aaaaaataagacactgtagttcgcgtgaatctaaaagttgtcg 51750  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  51751 tgaatcaaagcaaaatgtcaa-taccaaagactttgttattgttccataattcta 51804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 445 - 549
Target Start/End: Original strand, 51837 - 51940
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||| |    
T  51837 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaacgaatagtacac-aaaaagtcctacacattacggaaaact 51935  T
Q  545 tctct 549  Q
    |||||    
T  51936 tctct 51940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 445 - 550
Target Start/End: Original strand, 49014 - 49119
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| || |||||| ||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||| |    
T  49014 taattttgaatgggaaattgaagttcgttgacatggaaatagtttcaataagtaagaaaatgaacagtacacaaaaaattcctacacattacggaaaact 49113  T
Q  545 tctctg 550  Q
    ||||||    
T  49114 tctctg 49119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 167; Significance: 3e-89; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 282 - 550
Target Start/End: Complemental strand, 34761601 - 34761340
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaa-ttaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34761601 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaaattaatactcactgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 34761502  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta-aacacaattaattttaaaagggaaactgaagtttgttgacatg 479  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||  | ||  | |         |||||||||| |||||||||    
T  34761501 gtgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcctat---------aactgaagttcgttgacatg 34761411  T
Q  480 caaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatttctctg 550  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||    
T  34761410 caaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctg 34761340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 282 - 550
Target Start/End: Complemental strand, 39878435 - 39878174
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaa-ttaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  39878435 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaaattaatactcactgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 39878336  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta-aacacaattaattttaaaagggaaactgaagtttgttgacatg 479  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||  | ||  | |         |||||||||| |||||||||    
T  39878335 gtgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcctat---------aactgaagttcgttgacatg 39878245  T
Q  480 caaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatttctctg 550  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||    
T  39878244 caaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctg 39878174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 283 - 550
Target Start/End: Complemental strand, 23184339 - 23184079
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaa-ttaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23184339 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaaattaatactcactgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 23184240  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta-aacacaattaattttaaaagggaaactgaagtttgttgacatgc 480  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||  | ||  | |         |||||||||| ||||||||||    
T  23184239 tgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcctat---------aactgaagttcgttgacatgc 23184149  T
Q  481 aaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatttctctg 550  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||    
T  23184148 aaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctg 23184079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 283 - 550
Target Start/End: Complemental strand, 23188606 - 23188346
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaa-ttaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23188606 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaaattaatactcactgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 23188507  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta-aacacaattaattttaaaagggaaactgaagtttgttgacatgc 480  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||  | ||  | |         |||||||||| ||||||||||    
T  23188506 tgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcctat---------aactgaagttcgttgacatgc 23188416  T
Q  481 aaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatttctctg 550  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||    
T  23188415 aaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctg 23188346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 281 - 550
Target Start/End: Complemental strand, 12655555 - 12655294
Alignment:
Q  281 aaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaa-ttaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgt 379  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  12655555 aaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaaattaatactcactgaaaaa-taagacactgtagttcgcttgaatgtaaaaattgt 12655457  T
Q  380 cgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta-aacacaattaattttaaaagggaaactgaagtttgttgacat 478  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||  | ||  | |         |||||||||| ||||||||    
T  12655456 cgtgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcctat---------aactgaagttcgttgacat 12655366  T
Q  479 gcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatttctctg 550  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||    
T  12655365 gcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctg 12655294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 282 - 436
Target Start/End: Original strand, 30090086 - 30090240
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  30090086 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcatagaaaaaataagacactgtaggtcgcttgaatgtaaaaattgtcg 30090185  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30090186 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 30090240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 282 - 436
Target Start/End: Original strand, 3607671 - 3607825
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  3607671 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcatagaaaaaataagacactgtaggtcgcttgaatgtaaaaattgtcg 3607770  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3607771 tgaatgaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 3607825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 282 - 436
Target Start/End: Original strand, 20104827 - 20104981
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||    
T  20104827 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcacagaaaaaataagacactgtaggtcgcttgaatgtaaaaattgtcg 20104926  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20104927 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 20104981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 445 - 550
Target Start/End: Original strand, 30090273 - 30090378
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  30090273 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaact 30090372  T
Q  545 tctctg 550  Q
    ||||||    
T  30090373 tctctg 30090378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 445 - 550
Target Start/End: Original strand, 3607858 - 3607963
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |    
T  3607858 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacgaaaaact 3607957  T
Q  545 tctctg 550  Q
    ||||||    
T  3607958 tctctg 3607963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 445 - 550
Target Start/End: Original strand, 20105014 - 20105118
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |    
T  20105014 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacac-aaaaagtcctacacattacggaaaact 20105112  T
Q  545 tctctg 550  Q
    ||||||    
T  20105113 tctctg 20105118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 282 - 436
Target Start/End: Complemental strand, 32675264 - 32675109
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaa-ttaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    ||||||||||| ||||||||||||||||||||||||||||||||  ||||| ||| |||||||||||||| || |||||||| ||||| |||||||||||    
T  32675264 aactagaccatagacccgtgctaacgcacgtgtcatttaaaaaagataatattcactgaaaaaataagactctatagttcgcgtgaatctaaaaattgtc 32675165  T
Q  381 g-tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    | ||||||||| || |||||||| || || |||||||||||||||||||||||||||    
T  32675164 gatgaatcaaaacataatgtcaa-tatcaaagactttgttattgttccataattcta 32675109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 32675076 - 32674972
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||| |||||| |    
T  32675076 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacaca-aaaagtcctacacattatggaaaact 32674978  T
Q  545 tctctg 550  Q
    ||||||    
T  32674977 tctctg 32674972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 167; Significance: 3e-89; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 278 - 550
Target Start/End: Complemental strand, 184473 - 184208
Alignment:
Q  278 gtaaaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaa-ttaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaat 376  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  184473 gtaatactagaccattgacccgtgctaacgcacgtgtcatttaaaaaaattaatactcactgaaaaaataagacactgtagttcgcttgaatgtaaaaat 184374  T
Q  377 tgtcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta-aacacaattaattttaaaagggaaactgaagtttgttga 475  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||  | ||  | |         |||||||||| |||||    
T  184373 tgtcgtgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcctat---------aactgaagttcgttga 184283  T
Q  476 catgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatttctctg 550  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||    
T  184282 catgcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctg 184208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 281 - 550
Target Start/End: Complemental strand, 2449704 - 2449442
Alignment:
Q  281 aaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaa-ttaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgt 379  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  2449704 aaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaaattaatactcactgaaaaaataagacactgtagttcacttgaatgtaaaaattgt 2449605  T
Q  380 cgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta-aacacaattaattttaaaagggaaactgaagtttgttgacat 478  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||  | ||  | |         |||||||||| ||||||||    
T  2449604 cgtgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcctat---------aactgaagttcgttgacat 2449514  T
Q  479 gcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatttctctg 550  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||    
T  2449513 gcaaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctg 2449442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 282 - 550
Target Start/End: Original strand, 975850 - 976108
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaa-ttaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  975850 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaaattaatactcactgaaaa-ataagacactgtagttcgcttgaatgtaaaaattgtc 975948  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta-aacacaattaattttaaaagggaaactgaagtttgttgacatg 479  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||  | ||  | |         |||||||||| |||  ||||    
T  975949 gtgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcctat---------aactgaagttcgtt--catg 976037  T
Q  480 caaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatttctctg 550  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||    
T  976038 caaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctg 976108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 282 - 436
Target Start/End: Complemental strand, 6124080 - 6123926
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||    
T  6124080 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcactgaaaaaataaaacattgtagttcgcttgaatgtaaaaattgtcg 6123981  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  6123980 tgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattcta 6123926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 282 - 436
Target Start/End: Complemental strand, 13905695 - 13905541
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||    
T  13905695 aactataccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcacagaaaaaataagacactgtaggtcgcttgaatgtaaaaattgtcg 13905596  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13905595 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 13905541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 282 - 436
Target Start/End: Complemental strand, 25647881 - 25647726
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaa-ttaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||    
T  25647881 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaaattaatactcactgaaaaaataagacactatagttcgcttgaatgaaaaaattgtc 25647782  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25647781 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 25647726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 283 - 436
Target Start/End: Complemental strand, 2301185 - 2301031
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaa-ttaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    ||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||    
T  2301185 actagaccattgacccgtgttaacgcacgtgtcatttaaaaaaattaatactcactgaaaaaataagacactgtagttcgcttgaatgaaaaaattatcg 2301086  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2301085 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 2301031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 281 - 436
Target Start/End: Complemental strand, 1513141 - 1512986
Alignment:
Q  281 aaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgt 379  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| | |||||||||||||||||||||||| ||||| ||||||||||    
T  1513141 aaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaatataatattcactaaaaaaataagacactgtagttcgcgtgaatctaaaaattgt 1513042  T
Q  380 cgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  1513041 cgtgaatcaaagcaaaatgtcaa-taccaaagactttgttattgttccataattcta 1512986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 283 - 438
Target Start/End: Original strand, 35431907 - 35432063
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaa-aaattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    ||||||||||||||| ||||||||||||| ||||||| || |||| |||| ||| || |||||||| ||| |||||||||||||||||||||||||||||    
T  35431907 actagaccattgaccggtgctaacgcacgggtcattttaagaaataaatattcactgtaaaaataaaacaatgtagttcgcttgaatgtaaaaattgtcg 35432006  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaaa 438  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  35432007 tgaatcaaagcataatgtcaattaccatagactttgttattgttccataattctaaa 35432063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 282 - 436
Target Start/End: Complemental strand, 208113 - 207960
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||| ||| ||||||| |||||||||||||||||| ||||| |||||||||||    
T  208113 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaagataatattcactgaaaaa-taagacactgtagttcgcgtgaatctaaaaattgtc 208015  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||||||||||||||| || || |||||||||||||||||||||||||||    
T  208014 gtgaatcaaagcaaaatgtcaa-tatcaaagactttgttattgttccataattcta 207960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 283 - 436
Target Start/End: Complemental strand, 26456273 - 26456120
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||||||||||||||| ||||||||||||||  ||||| ||| |||||||||||||||||||||||||| ||||| ||||||||||||    
T  26456273 actagaccattgacccgtgctaacgcacatgtcatttaaaaaagataatattcactgaaaaaataagacactgtagttcgcgtgaatctaaaaattgtcg 26456174  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||||| |||||||| || || |||||||||||||||||||||||||||    
T  26456173 tgaatcaaagcataatgtcaa-tatcaaagactttgttattgttccataattcta 26456120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 283 - 436
Target Start/End: Complemental strand, 40605735 - 40605582
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||||||||||||||| ||||||||||||||  ||||| ||| |||||||||||||||||||||||||| ||||| ||||||||||||    
T  40605735 actagaccattgacccgtgctaacgcacatgtcatttaaaaaagataatattcactgaaaaaataagacactgtagttcgcgtgaatctaaaaattgtcg 40605636  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||||| |||||||| || || |||||||||||||||||||||||||||    
T  40605635 tgaatcaaagcataatgtcaa-tatcaaagactttgttattgttccataattcta 40605582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 285 - 437
Target Start/End: Original strand, 1916543 - 1916696
Alignment:
Q  285 tagaccattgacccgtgctaacgcacgtgtcatttaaaaaa-ttaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcgtg 383  Q
    ||||||||||||||||||||||||||| ||||||| || || |||||| ||| || |||||||| ||| ||||||||||||||||||||||||| |||||    
T  1916543 tagaccattgacccgtgctaacgcacgggtcattttaagaagttaatattcactgtaaaaataaaacaatgtagttcgcttgaatgtaaaaattatcgtg 1916642  T
Q  384 aatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  1916643 aatcaaagaataatgtcaattaccatagactttgttattgttccataattctaa 1916696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 282 - 437
Target Start/End: Complemental strand, 19822271 - 19822116
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    |||||||||||||||||||||||||||||| ||||||| || || ||| || |||| | |||||||| ||| ||||||||||||||||||||||||||||    
T  19822271 aactagaccattgacccgtgctaacgcacgggtcattttaagaagtaaatattcat-gtaaaaataaaacaatgtagttcgcttgaatgtaaaaattgtc 19822173  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  19822172 gtgaatcaaagcataatgtcaattacgatagactttgttattgttccataattctaa 19822116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 282 - 437
Target Start/End: Complemental strand, 19842492 - 19842337
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    |||||||||||||||||||||||||||||| ||||||| || || ||| || |||| | |||||||| ||| ||||||||||||||||||||||||||||    
T  19842492 aactagaccattgacccgtgctaacgcacgggtcattttaagaagtaaatattcat-gtaaaaataaaacaatgtagttcgcttgaatgtaaaaattgtc 19842394  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  19842393 gtgaatcaaagcataatgtcaattacgatagactttgttattgttccataattctaa 19842337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 282 - 436
Target Start/End: Original strand, 21588876 - 21589030
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||| ||| ||||||||||||||| |||||||||| ||||| |||||| | |     
T  21588876 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaagataatattcactgaaaaaataagacattgtagttcgcgtgaatctaaaaaatttt 21588975  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  21588976 gtgaatcaaagcaaaatgtcaa-taccaaagactttgttattgttccataattcta 21589030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 282 - 437
Target Start/End: Original strand, 36437374 - 36437530
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    |||||||||||||| || |||||||||||| ||||||| || || ||| || ||| || |||||||| ||| ||||||||||||||||||||||||||||    
T  36437374 aactagaccattgatccatgctaacgcacgggtcattttaagaagtaaatattcactgtaaaaataaaacaatgtagttcgcttgaatgtaaaaattgtc 36437473  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  36437474 gtgaatcaaagcataatgtcaattacgatagactttgttattgttccataattctaa 36437530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 283 - 437
Target Start/End: Original strand, 27997223 - 27997378
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||| |||||||||||| ||||||| || || ||| || ||| || |||||||| ||| |||||||||||||||||||||||||||||    
T  27997223 actagaccattgacccatgctaacgcacgggtcattttaagaagtaaatattcactgtaaaaataaaacaatgtagttcgcttgaatgtaaaaattgtcg 27997322  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    |||||||||||| || ||||||||| ||||||||||||||||||||||||||||||    
T  27997323 tgaatcaaagcataaggtcaattacgatagactttgttattgttccataattctaa 27997378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 283 - 437
Target Start/End: Original strand, 28098593 - 28098748
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||| |||||||||||| ||||||| || || ||| || ||| || |||||||| ||| |||||||||||||||||||||||||||||    
T  28098593 actagaccattgacccatgctaacgcacgggtcattttaagaagtaaatattcactgtaaaaataaaacaatgtagttcgcttgaatgtaaaaattgtcg 28098692  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    |||||||||||| || ||||||||| ||||||||||||||||||||||||||||||    
T  28098693 tgaatcaaagcataaggtcaattacgatagactttgttattgttccataattctaa 28098748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 283 - 436
Target Start/End: Original strand, 5013301 - 5013453
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||  ||| |||||| |||||||| |||||||||| ||||| ||||||||||||    
T  5013301 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaagataattttcactgaaaa-ataagacaatgtagttcgcgtgaatctaaaaattgtcg 5013399  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||||| |||||||| || || |||||||||||||||||||||||||||    
T  5013400 tgaatcaaagcataatgtcaa-tatcaaagactttgttattgttccataattcta 5013453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 445 - 542
Target Start/End: Complemental strand, 25647693 - 25647596
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaa 542  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25647693 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaa 25647596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 445 - 550
Target Start/End: Original strand, 27997410 - 27997515
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |    
T  27997410 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagttctacacattacggaaaact 27997509  T
Q  545 tctctg 550  Q
    ||||||    
T  27997510 tctctg 27997515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 445 - 550
Target Start/End: Original strand, 28098780 - 28098885
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |    
T  28098780 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagttctacacattacggaaaact 28098879  T
Q  545 tctctg 550  Q
    ||||||    
T  28098880 tctctg 28098885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 283 - 436
Target Start/End: Complemental strand, 13908628 - 13908474
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaa-taagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    ||||||||||||||| |||||||||||||||||||||||||||  ||||| ||| |||||||| ||||| |||||||||||| ||||| |||||||||||    
T  13908628 actagaccattgacctgtgctaacgcacgtgtcatttaaaaaagataatattcactgaaaaaaataagaaactgtagttcgcatgaatctaaaaattgtc 13908529  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||| |||||||| || || |||||||||| ||||||||||||||||    
T  13908528 gtgaatcaaagcataatgtcaa-tatcaaagactttgtttttgttccataattcta 13908474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 445 - 547
Target Start/End: Original strand, 1916728 - 1916830
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |    
T  1916728 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacatattatggaaaact 1916827  T
Q  545 tct 547  Q
    |||    
T  1916828 tct 1916830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 445 - 547
Target Start/End: Complemental strand, 20890860 - 20890758
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |    
T  20890860 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaatgtcctacacattacggaaaact 20890761  T
Q  545 tct 547  Q
    |||    
T  20890760 tct 20890758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 445 - 547
Target Start/End: Original strand, 36437562 - 36437664
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  36437562 taattttaaaagggaaactgaagttcgttgacatacaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaact 36437661  T
Q  545 tct 547  Q
    |||    
T  36437662 tct 36437664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 445 - 542
Target Start/End: Complemental strand, 2300998 - 2300901
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaa 542  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2300998 taattttaaaagggaaactgaagttcgttgatatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaa 2300901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 13905508 - 13905404
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |    
T  13905508 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacaca-aaaagtcctacatattacggaaaact 13905410  T
Q  545 tctctg 550  Q
    ||||||    
T  13905409 tctctg 13905404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 285 - 437
Target Start/End: Original strand, 42109205 - 42109357
Alignment:
Q  285 tagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcgtg 383  Q
    |||||||||||||| ||||||| |||| ||||||| || || ||| || |||| | |||||||| ||| ||||||||| |||||||||||||||||||||    
T  42109205 tagaccattgacccctgctaacacacgggtcattttaagaagtaaatattcat-gtaaaaataaaacaatgtagttcgtttgaatgtaaaaattgtcgtg 42109303  T
Q  384 aatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  42109304 aatcaaagcataatgtcaattacgatagactttgttattgttccataattctaa 42109357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 281 - 436
Target Start/End: Complemental strand, 1273311 - 1273147
Alignment:
Q  281 aaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaa---------ttaatactcattgaaaaaataagacactgtagttcgcttgaatgta 371  Q
    ||||||||||||||||||||||||||||||  ||||||| || ||         |||||| ||| || |||||||| ||| |||||||||||||||||||    
T  1273311 aaactagaccattgacccgtgctaacgcacaggtcattttaagaagttaataagttaatattcactggaaaaataaaacaatgtagttcgcttgaatgta 1273212  T
Q  372 aaaattgtcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  1273211 aaaattgttgtgaatcaaagcataatgtcaattaccatagacattgttattgttccataattcta 1273147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 283 - 437
Target Start/End: Complemental strand, 20891046 - 20890892
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||| | |||||||||||| ||||||| || || ||| || |||| | |||||||| ||| |||||||||||||||||||||||||||||    
T  20891046 actagaccattgacgcatgctaacgcacgggtcattttaagaagtaaataatcat-gtaaaaataaaacaatgtagttcgcttgaatgtaaaaattgtcg 20890948  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    ||||||||| || |||||||||||| ||||| ||||||||||||||||||||||||    
T  20890947 tgaatcaaaccataatgtcaattacgatagattttgttattgttccataattctaa 20890892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 6123893 - 6123787
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcc-tacaaattacggaaaat 543  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||     
T  6123893 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataaataagaaaatgaatagtacacaaaaaagtccttacacattacggaaaac 6123794  T
Q  544 ttctctg 550  Q
    |||||||    
T  6123793 ttctctg 6123787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 445 - 547
Target Start/End: Complemental strand, 19822084 - 19821982
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||| |    
T  19822084 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaatcagtaagaaaatgaatagtacacaaaaaagtcctacacattccggaaaact 19821985  T
Q  545 tct 547  Q
    |||    
T  19821984 tct 19821982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 445 - 547
Target Start/End: Complemental strand, 19842305 - 19842203
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||| |    
T  19842305 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaatcagtaagaaaatgaatagtacacaaaaaagtcctacacattccggaaaact 19842206  T
Q  545 tct 547  Q
    |||    
T  19842205 tct 19842203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 207927 - 207822
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |    
T  207927 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaact 207828  T
Q  545 tctctg 550  Q
    ||||||    
T  207827 tctctg 207822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 445 - 530
Target Start/End: Complemental strand, 1273114 - 1273029
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctaca 530  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1273114 taattttaaaagggaaactgaagtttgttgacatgcatatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctaca 1273029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 1512953 - 1512848
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |    
T  1512953 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaact 1512854  T
Q  545 tctctg 550  Q
    ||||||    
T  1512853 tctctg 1512848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 445 - 542
Target Start/End: Complemental strand, 13908441 - 13908344
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaa 542  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  13908441 taattttgaaagggaaattgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaa 13908344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 40605549 - 40605444
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |    
T  40605549 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaact 40605450  T
Q  545 tctctg 550  Q
    ||||||    
T  40605449 tctctg 40605444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 445 - 542
Target Start/End: Original strand, 42109389 - 42109486
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaa 542  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  42109389 taattttaaaagggaaactgaagttcgttgacatgcaaataatttcaataagtaagaaaatgaatagtacacaaaaaggtcctacacattacggaaaa 42109486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 445 - 550
Target Start/End: Original strand, 35432094 - 35432200
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacac-aaaaaagtcctacaaattacggaaaat 543  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||||     
T  35432094 taattttaaaagggaaactaaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaaagtcctacacattatggaaaac 35432193  T
Q  544 ttctctg 550  Q
    |||||||    
T  35432194 ttctctg 35432200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 445 - 550
Target Start/End: Original strand, 5013486 - 5013591
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||| |    
T  5013486 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacgaaaaact 5013585  T
Q  545 tctctg 550  Q
    ||||||    
T  5013586 tctctg 5013591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 26456087 - 26455982
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||| |    
T  26456087 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtactacacattacggaaaact 26455988  T
Q  545 tctctg 550  Q
    ||||||    
T  26455987 tctctg 26455982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 281 - 317
Target Start/End: Original strand, 12008477 - 12008513
Alignment:
Q  281 aaactagaccattgacccgtgctaacgcacgtgtcat 317  Q
    |||||||||||||||||||||||||| |||| |||||    
T  12008477 aaactagaccattgacccgtgctaacacacgggtcat 12008513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 166; Significance: 1e-88; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 283 - 550
Target Start/End: Complemental strand, 26948196 - 26947936
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaa-ttaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26948196 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaaattaatactcactgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 26948097  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta-aacacaattaattttaaaagggaaactgaagtttgttgacatgc 480  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||  | ||  | |         |||||||||| ||||||||||    
T  26948096 tgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcctat---------aactgaagttcgttgacatgc 26948006  T
Q  481 aaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatttctctg 550  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||    
T  26948005 aaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctg 26947936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 283 - 436
Target Start/End: Original strand, 29864559 - 29864712
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcgt 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29864559 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcactgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcgt 29864658  T
Q  383 gaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29864659 gaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 29864712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 282 - 436
Target Start/End: Complemental strand, 4594492 - 4594338
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4594492 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcattgaaaaaataagacaccgtagttcgcttgaatgtaaaaattgtcg 4594393  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  4594392 tgaatcaaagcaaactgtcaattaccatagattttgttattgttccataattcta 4594338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 283 - 436
Target Start/End: Original strand, 13454616 - 13454769
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcgt 382  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  13454616 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcatagaaaaaataagacactgtaggtcgcttgaatgtaaaaattgtcgt 13454715  T
Q  383 gaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13454716 gaatgaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 13454769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 283 - 436
Target Start/End: Complemental strand, 16651799 - 16651646
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcgt 382  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  16651799 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcatagaaaaaataagacactgtaggtcgcttgaatgtaaaaattgtcgt 16651700  T
Q  383 gaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16651699 gaatcaaagcaaaatgtcaattaccatagactttgttattgttccacaattcta 16651646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 283 - 436
Target Start/End: Complemental strand, 12261207 - 12261054
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcgt 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||    
T  12261207 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcactgaaaaaataaaacattgtagttcgcttgaatgtaaaaattgtcgt 12261108  T
Q  383 gaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12261107 gaatcaaagcaaaatgacaattaccatagactttgttattgttccataattcta 12261054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 283 - 433
Target Start/End: Complemental strand, 12825579 - 12825429
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcgt 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||| |||||||||||||||||||||    
T  12825579 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatacttaccgaaaaaataagacactgtagttcacttgaatgtaaaaattgtcgt 12825480  T
Q  383 gaatcaaagcaaaatgtcaattaccatagactttgttattgttccataatt 433  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12825479 gaatcaaagcaaaatgtcaattaccatagactttgtttttgttccataatt 12825429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 283 - 436
Target Start/End: Complemental strand, 18199082 - 18198929
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||| ||| ||||||||||||||| |||||||||| ||||| ||||||||||||    
T  18199082 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaagataatattcactgaaaaaataagacattgtagttcgcgtgaatctaaaaattgtcg 18198983  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||    
T  18198982 tgaatcaaagcaaaatgtcaa-taccaaagacgttgttattgttccataattcta 18198929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 283 - 436
Target Start/End: Original strand, 36946889 - 36947043
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaa-ttaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    ||||||||||||||||||||||||||||  |||||||  |||| |||||| ||| || |||||||| ||| |||||||||||||||||||||||||||||    
T  36946889 actagaccattgacccgtgctaacgcacaagtcattttcaaaagttaatattcactgtaaaaataaaacaatgtagttcgcttgaatgtaaaaattgtcg 36946988  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  36946989 tgaatcaaagcataatgtcaattaccatagactttgttattgttccataattcta 36947043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 283 - 436
Target Start/End: Original strand, 38655655 - 38655809
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaatta--atactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  ||| ||| | |||||||||||||||||||||||| ||||| |||||||||||    
T  38655655 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaaatataataatcactaaaaaaataagacactgtagttcgcgtgaatctaaaaattgtc 38655754  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||    
T  38655755 gtgaatcaaagaaaaatgtcaa-taccaaagactttgttattgttccataattcta 38655809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 283 - 436
Target Start/End: Original strand, 36087324 - 36087476
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||| ||| |||||| |||||||| |||||||||| ||||| ||||||||||||    
T  36087324 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaagataatattcactgaaaa-ataagacattgtagttcgcgtgaatctaaaaattgtcg 36087422  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  36087423 tgaatcaaagcaaaatgtcaa-taccaaagactttgttattgttccataattcta 36087476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 282 - 436
Target Start/End: Complemental strand, 35716688 - 35716535
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||| ||| ||||||| ||||||| |||||||||| ||||| |||||||||||    
T  35716688 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaagataatattcactgaaaaa-taagacattgtagttcgcgtgaatctaaaaattgtc 35716590  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
     ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  35716589 atgaatcaaagcaaaatgtcaa-taccaaagactttgttattgttccataattcta 35716535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 283 - 436
Target Start/End: Complemental strand, 26951886 - 26951733
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    ||||||||||||||| |||||||||||||||||||||||||||  ||||| ||| |||||||||||||||||||||||||| ||||| ||||||||||||    
T  26951886 actagaccattgacctgtgctaacgcacgtgtcatttaaaaaagataatattcactgaaaaaataagacactgtagttcgcgtgaatctaaaaattgtcg 26951787  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||| || |||||||| || || |||||||||||||||||||||||||||    
T  26951786 tgaatcaaaacataatgtcaa-tatcaaagactttgttattgttccataattcta 26951733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 283 - 436
Target Start/End: Complemental strand, 31487601 - 31487449
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||| ||| | | |||||||||||||||||||||| ||||| ||||||||||||    
T  31487601 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaagataatattcact-ataaaataagacactgtagttcgcgtgaatctaaaaattgtcg 31487503  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  31487502 tgaatgaaagcaaaatgtcaa-taccaaagactttgttattgttccataattcta 31487449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 283 - 437
Target Start/End: Complemental strand, 47727001 - 47726847
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||| |||||||||||| ||||||| || || ||| || |||| | |||||||| ||| |||||||||||||||||||||||||||||    
T  47727001 actagaccattgacccatgctaacgcacgggtcattttaataagtaaatattcat-gtaaaaataaaacaatgtagttcgcttgaatgtaaaaattgtcg 47726903  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  47726902 tgaatcaaagcataatgtcaattacgatagactttgttattgttccataattctaa 47726847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 280 - 437
Target Start/End: Complemental strand, 860218 - 860060
Alignment:
Q  280 aaaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattg 378  Q
    |||| ||||||||||||||||||||||| ||| ||||||| || || ||| || |||| | |||||||| ||| ||||||||||||||||||||||||||    
T  860218 aaaaatagaccattgacccgtgctaacgtacgggtcattttaagaagtaaatattcatcgtaaaaataaaacaatgtagttcgcttgaatgtaaaaattg 860119  T
Q  379 tcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    |||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||    
T  860118 tcgtgaatcaaaacataatgtcaattacgatagactttgttattgttccataattctaa 860060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 283 - 436
Target Start/End: Original strand, 36091161 - 36091314
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    ||||||||||||||||||||||||||||||||||||||||||   ||||| ||| |||||||||||||||||||||||||  ||||| ||||||||||||    
T  36091161 actagaccattgacccgtgctaacgcacgtgtcatttaaaaatgataatattcactgaaaaaataagacactgtagttcgtgtgaatctaaaaattgtcg 36091260  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||| | |||||||| || || |||||||||||||||||||||||||||    
T  36091261 tgaatcaaagtataatgtcaa-tatcaaagactttgttattgttccataattcta 36091314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 283 - 436
Target Start/End: Original strand, 49562143 - 49562295
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||| ||| | |||| ||||||||| ||||||||| ||||| |||||||||||     
T  49562143 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaagataatattcacttaaaa-ataagacaccgtagttcgcgtgaatctaaaaattgtca 49562241  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  49562242 tgaatcaaagcaaaatgtcaa-taccaaagactttgttattgttccataattcta 49562295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 16651613 - 16651508
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  16651613 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaact 16651514  T
Q  545 tctctg 550  Q
    ||||||    
T  16651513 tctctg 16651508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 445 - 550
Target Start/End: Original strand, 36947076 - 36947181
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  36947076 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaaat 36947175  T
Q  545 tctctg 550  Q
    ||||||    
T  36947176 tctctg 36947181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 283 - 430
Target Start/End: Complemental strand, 854955 - 854809
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||| ||| ||||||| |||||||||||||||||  ||||| ||||||||||||    
T  854955 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaagataatattcactgaaaaa-taagacactgtagttcgtgtgaatctaaaaattgtcg 854857  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccata 430  Q
    |||||||||||||||||| || ||||| |||||||||||||||||||||    
T  854856 tgaatcaaagcaaaatgttaa-taccaaagactttgttattgttccata 854809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 282 - 437
Target Start/End: Original strand, 43508613 - 43508768
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    ||||||||||||||||| |||||||||||| ||||||| || || ||| || |||| | |||||||| ||| ||||||||||||||||||||||||||||    
T  43508613 aactagaccattgacccatgctaacgcacgggtcattttaagaagtaaatattcat-gtaaaaataaaacaatgtagttcgcttgaatgtaaaaattgtc 43508711  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    |||||||||| || |||||||||||| ||||||||||||||||||||||||||||||    
T  43508712 gtgaatcaaaacataatgtcaattacgatagactttgttattgttccataattctaa 43508768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 4594305 - 4594200
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  4594305 taattttaaaagagaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaact 4594206  T
Q  545 tctctg 550  Q
    ||||||    
T  4594205 tctctg 4594200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 12825393 - 12825288
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  12825393 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattatggaaaatt 12825294  T
Q  545 tctctg 550  Q
    | ||||    
T  12825293 tatctg 12825288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 445 - 550
Target Start/End: Original strand, 13454802 - 13454907
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |    
T  13454802 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacgaaaaact 13454901  T
Q  545 tctctg 550  Q
    ||||||    
T  13454902 tctctg 13454907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 18198896 - 18198791
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  18198896 taattttgaaagggaaattgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaact 18198797  T
Q  545 tctctg 550  Q
    ||||||    
T  18198796 tctctg 18198791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 284 - 436
Target Start/End: Original strand, 33003622 - 33003774
Alignment:
Q  284 ctagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcgt 382  Q
    ||||||||||||||| |||||||||||| ||||||| || || ||| || |||| | |||||||| ||| ||||||||||||||||||||||||||||||    
T  33003622 ctagaccattgacccatgctaacgcacgggtcattttaagaagtaaatattcat-gtaaaaataaaacaatgtagttcgcttgaatgtaaaaattgtcgt 33003720  T
Q  383 gaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||| | |||||||||||| |||||||||||||||||||||||||||||    
T  33003721 gaatcaaagtataatgtcaattacgatagactttgttattgttccataattcta 33003774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 445 - 547
Target Start/End: Complemental strand, 11826669 - 11826567
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  11826669 taattttaaaaggaaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaact 11826570  T
Q  545 tct 547  Q
    |||    
T  11826569 tct 11826567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 445 - 550
Target Start/End: Original strand, 52418714 - 52418819
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||| |    
T  52418714 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctatacattacagaaaact 52418813  T
Q  545 tctctg 550  Q
    ||||||    
T  52418814 tctctg 52418819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 12261021 - 12260915
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcc-tacaaattacggaaaat 543  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||     
T  12261021 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataaataagaaaatgaatagtacacaaaaaagtccttacacattacggaaaac 12260922  T
Q  544 ttctctg 550  Q
    |||||||    
T  12260921 ttctctg 12260915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 445 - 547
Target Start/End: Original strand, 33003804 - 33003906
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |    
T  33003804 taattttaaaagggaaactgaagttcgttgacatgcaaataatttcaataagtaagaaaatgaatagtacacaaaaaagtcatacacattacggaaaact 33003903  T
Q  545 tct 547  Q
    |||    
T  33003904 tct 33003906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 26951700 - 26951595
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |    
T  26951700 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaact 26951601  T
Q  545 tctctg 550  Q
    ||||||    
T  26951600 tctctg 26951595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 35716502 - 35716397
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |    
T  35716502 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacagattacggaaaact 35716403  T
Q  545 tctctg 550  Q
    ||||||    
T  35716402 tctctg 35716397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 445 - 550
Target Start/End: Original strand, 38655842 - 38655947
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |    
T  38655842 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaact 38655941  T
Q  545 tctctg 550  Q
    ||||||    
T  38655942 tctctg 38655947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 283 - 437
Target Start/End: Complemental strand, 11826855 - 11826701
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||| |||||||||||| ||||||| || || ||| || |||| | |||||||| ||| ||||||||| ||||||||||||||| |||    
T  11826855 actagaccattgacccatgctaacgcacgggtcattttaagaagtaaatattcat-gtaaaaataaaacaatgtagttcgattgaatgtaaaaattatcg 11826757  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    |||| |||| || |||||||||||| ||||||||||||||||||||||||||||||    
T  11826756 tgaaacaaaacataatgtcaattacgatagactttgttattgttccataattctaa 11826701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 445 - 547
Target Start/End: Complemental strand, 860028 - 859926
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||| |    
T  860028 taattttaaaagggaaattgaagttcgttgacatgcaaatagtttcaataaataagaaaatgaatagtacacaaaaaagtcatacacattacggaaaact 859929  T
Q  545 tct 547  Q
    |||    
T  859928 tct 859926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 445 - 550
Target Start/End: Original strand, 36087509 - 36087614
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||| |    
T  36087509 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtatacaaaaaagtcctacacattacggaaaact 36087608  T
Q  545 tctctg 550  Q
    ||||||    
T  36087609 tctctg 36087614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 445 - 550
Target Start/End: Original strand, 49562328 - 49562433
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||| |    
T  49562328 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcatacacattacggaaaact 49562427  T
Q  545 tctctg 550  Q
    ||||||    
T  49562428 tctctg 49562433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 854768 - 854663
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| || |||||| ||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |    
T  854768 taattttgaaggggaaattgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaact 854669  T
Q  545 tctctg 550  Q
    ||||||    
T  854668 tctctg 854663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 445 - 548
Target Start/End: Complemental strand, 31487416 - 31487314
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||| |    
T  31487416 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacaca-aaaagtcctacacattaccgaaaact 31487318  T
Q  545 tctc 548  Q
    ||||    
T  31487317 tctc 31487314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 445 - 547
Target Start/End: Original strand, 36091347 - 36091449
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| |||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||| |    
T  36091347 taattttgaaagggaaattgaatttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcatacacattacggaaaact 36091446  T
Q  545 tct 547  Q
    |||    
T  36091447 tct 36091449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 340 - 436
Target Start/End: Original strand, 52418585 - 52418681
Alignment:
Q  340 aaaaataagacactgtagttcgcttgaatgtaaaaattgtcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||| ||| |||||||||||||||||||||||||||||| |||||||||| ||| ||||||| |||| |||||||||||||||||||||||||    
T  52418585 aaaaataaaacaatgtagttcgcttgaatgtaaaaattgtcgtaaatcaaagcataatatcaattaacataaactttgttattgttccataattcta 52418681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 283 - 357
Target Start/End: Complemental strand, 15081842 - 15081768
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcattgaaaaaataagacactgtag 357  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  15081842 actagaccattgacccgtgctaacgtacgtgtcatttaaaaaattaatactcacagaaaaaataagacactgtag 15081768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 445 - 485
Target Start/End: Complemental strand, 47726816 - 47726776
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaata 485  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  47726816 taattttaaaagggaaactgaagttcgttgacatgcaaata 47726776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 317
Target Start/End: Original strand, 53926337 - 53926380
Alignment:
Q  274 taaagtaaaactagaccattgacccgtgctaacgcacgtgtcat 317  Q
    |||| |||||||||||||| |||||||||||||||||| |||||    
T  53926337 taaaataaaactagaccatcgacccgtgctaacgcacgagtcat 53926380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 162; Significance: 3e-86; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 283 - 550
Target Start/End: Complemental strand, 7889201 - 7888941
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcattt-aaaaaattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  7889201 actagaccattgacccgtgctaacgcacgtgtcattttaaaaaattaatactcactgaaaaaataagacattgtagttcgcttgaatgtaaaaattgtcg 7889102  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta-aacacaattaattttaaaagggaaactgaagtttgttgacatgc 480  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||  | ||  | |         |||||||||| ||||||||||    
T  7889101 tgaatcaaagcaaaatgacaattaccatagactttgttattgttccataattctagtacgtagttcctat---------aactgaagttcgttgacatgc 7889011  T
Q  481 aaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatttctctg 550  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||    
T  7889010 aaatactttcaataagtaagaaaatgaatagtacccaaaaaagtcctacacattacggaaaacttctctg 7888941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 280 - 436
Target Start/End: Complemental strand, 27716310 - 27716155
Alignment:
Q  280 aaaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgt 379  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  27716310 aaaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaat-ctcactgaaaaaataagacactgtagttcgcttgaatgtaaaaattgt 27716212  T
Q  380 cgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27716211 cgtgaatcaaagcaaaatgtcaattaccatagacgttgttattgttccataattcta 27716155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 282 - 436
Target Start/End: Complemental strand, 17697281 - 17697127
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||    
T  17697281 aactagaccattgacccgtgctaacgcacatgtcatttaaaaaattaatactcactgaaaaaataagacattgtagttcgcttgaatgtaaaaattatcg 17697182  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17697181 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 17697127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 282 - 436
Target Start/End: Complemental strand, 16720267 - 16720113
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||| |||    
T  16720267 aactagaccattgacccgtgctaacgcacatgtcatttaaaaaattaatactcactgaaaaaataatacattgtagttcgcttgaatgtaaaaattatcg 16720168  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16720167 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 16720113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 283 - 436
Target Start/End: Complemental strand, 45116195 - 45116042
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||    
T  45116195 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaagataatactcactgaaaaaataagacactgtagttcgcgtgaatctaaaaattgtcg 45116096  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||||||||||| ||| | |||||||||||||||||||||||||||    
T  45116095 tgaatcaaagcaaaatgtcaa-tacgaaagactttgttattgttccataattcta 45116042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 283 - 436
Target Start/End: Complemental strand, 26169209 - 26169056
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||| ||||| ||||||||||||    
T  26169209 actagaccattgacccgtgctaacacacgtgtcatttaaaaaatataatattcactgaaaaaataagacactgtagttcgcgtgaatctaaaaattgtcg 26169110  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||||||||||| || || |||||||||||||||||||||||||||    
T  26169109 tgaatcaaagcaaaatgtcaa-tatcaaagactttgttattgttccataattcta 26169056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 282 - 436
Target Start/End: Original strand, 20955491 - 20955645
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    ||||||||||||| ||||||||||||||||||||||||||||||  ||||| ||| ||||||||||||||| |||||||||| ||||| |||||||||||    
T  20955491 aactagaccattgtcccgtgctaacgcacgtgtcatttaaaaaagataatattcactgaaaaaataagacattgtagttcgcgtgaatctaaaaattgtc 20955590  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  20955591 gtgaatcaaagcaaaatgtcaa-taccaaagactttgttattgttccataattcta 20955645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 282 - 436
Target Start/End: Complemental strand, 29956844 - 29956689
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaa-ttaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    |||||||||||||||||||||||||||||| ||||||| || || |||||| ||| || |||||||| ||| ||||||||||||||||||||||||||||    
T  29956844 aactagaccattgacccgtgctaacgcacgggtcattttaagaagttaatattcaatgtaaaaataaaacaatgtagttcgcttgaatgtaaaaattgtc 29956745  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    || |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29956744 gtaaatcaaagcataatgtcaattaccatagactttgttattgttccataattcta 29956689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 282 - 436
Target Start/End: Complemental strand, 32660589 - 32660436
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||| ||| ||||||| |||||||||||||||||| ||||| |||||||||||    
T  32660589 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaagataatattcactgaaaaa-taagacactgtagttcgcgtgaatctaaaaattgtc 32660491  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  32660490 gtgaatcaaagcaaaatgtcaa-taccaaagactttgttattgttccataattcta 32660436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 280 - 437
Target Start/End: Complemental strand, 46909716 - 46909558
Alignment:
Q  280 aaaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattg 378  Q
    |||||||||||||||||||||||||| ||||| ||||||| || || ||| || ||| || |||||||| ||| ||||||||||||||||||||||||||    
T  46909716 aaaactagaccattgacccgtgctaatgcacgcgtcattttaagaagtaaatattcactgtaaaaataaaacaatgtagttcgcttgaatgtaaaaattg 46909617  T
Q  379 tcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  46909616 tcgtgaatcaaagcataatgtcaattaccatagactttgttattgttccataattctaa 46909558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 283 - 436
Target Start/End: Complemental strand, 7894122 - 7893969
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||||||||||||||| ||||||||||||||  ||||| ||| |||||||||||||||||||||||||| ||||| ||||||||||||    
T  7894122 actagaccattgacccgtgctaacgcacatgtcatttaaaaaagataatattcactgaaaaaataagacactgtagttcgcgtgaatctaaaaattgtcg 7894023  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||||| |||||||| || || |||||||||||||||||||||||||||    
T  7894022 tgaatcaaagcataatgtcaa-tatcaaagactttgttattgttccataattcta 7893969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 283 - 437
Target Start/End: Original strand, 13398146 - 13398301
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||| |||||||||||| ||||||| || || ||| || ||| || |||||||| ||| |||||||||||||||||||||||||||||    
T  13398146 actagaccattgacccatgctaacgcacgagtcattttaagaagtaaatattcactgtaaaaataaaacaatgtagttcgcttgaatgtaaaaattgtcg 13398245  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  13398246 tgaatcaaagcataatgtcaattacgatagactttgttattgttccataattctaa 13398301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 282 - 437
Target Start/End: Complemental strand, 5093937 - 5093781
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    |||||||||| |||||| |||||||||||| ||||||| || || ||| || ||| || |||||||| ||| ||||||||||||||||||||||||||||    
T  5093937 aactagaccactgacccatgctaacgcacgggtcattttaagaagtaaatattcactgtaaaaataaaacaatgtagttcgcttgaatgtaaaaattgtc 5093838  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  5093837 gtgaatcaaagcataatgtcaattacgatagactttgttattgttccataattctaa 5093781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 29956656 - 29956551
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  29956656 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaact 29956557  T
Q  545 tctctg 550  Q
    ||||||    
T  29956556 tctctg 29956551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 281 - 435
Target Start/End: Complemental strand, 22007348 - 22007193
Alignment:
Q  281 aaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaa-taagacactgtagttcgcttgaatgtaaaaattg 378  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||| ||| |||||||| ||||| |||||||||||| ||||| |||||||||    
T  22007348 aaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaagataatattcactgaaaaaaataagaaactgtagttcgcatgaatctaaaaattg 22007249  T
Q  379 tcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattct 435  Q
    | ||||||||||||| |||||||| || || ||||||||||||||||||||||||||    
T  22007248 ttgtgaatcaaagcataatgtcaa-tatcaaagactttgttattgttccataattct 22007193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 283 - 430
Target Start/End: Complemental strand, 32038809 - 32038663
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||| ||| ||||||| ||||||| |||||||||| ||||| ||||||||||||    
T  32038809 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaagataatattcactgaaaaa-taagacattgtagttcgcgtgaatctaaaaattgtcg 32038711  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccata 430  Q
    |||||||||||||||||| || ||||| |||||||||||||||||||||    
T  32038710 tgaatcaaagcaaaatgttaa-taccaaagactttgttattgttccata 32038663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 445 - 542
Target Start/End: Complemental strand, 31100317 - 31100220
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaa 542  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  31100317 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtatacaaaaaagtcctacacattacggaaaa 31100220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 445 - 547
Target Start/End: Original strand, 13398333 - 13398435
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  13398333 taattttaaaagggaaactaaagttcgttgacatacaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaact 13398432  T
Q  545 tct 547  Q
    |||    
T  13398433 tct 13398435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 445 - 547
Target Start/End: Original strand, 20955678 - 20955780
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  20955678 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaact 20955777  T
Q  545 tct 547  Q
    |||    
T  20955778 tct 20955780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 7893936 - 7893831
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |    
T  7893936 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaact 7893837  T
Q  545 tctctg 550  Q
    ||||||    
T  7893836 tctctg 7893831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 22007159 - 22007054
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |    
T  22007159 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaact 22007060  T
Q  545 tctctg 550  Q
    ||||||    
T  22007059 tctctg 22007054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 26169023 - 26168918
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |    
T  26169023 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaact 26168924  T
Q  545 tctctg 550  Q
    ||||||    
T  26168923 tctctg 26168918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 27716122 - 27716018
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |    
T  27716122 taattttaaaagggaaactgaagttcgttgacatgcaaatcgtttcaataagtaagaaaatgaatagtacaca-aaaagtcctacacattacggaaaact 27716024  T
Q  545 tctctg 550  Q
    ||||||    
T  27716023 tctctg 27716018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 32660403 - 32660298
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |    
T  32660403 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaact 32660304  T
Q  545 tctctg 550  Q
    ||||||    
T  32660303 tctctg 32660298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 445 - 549
Target Start/End: Complemental strand, 45116009 - 45115905
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |    
T  45116009 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcatacacattacggaaaact 45115910  T
Q  545 tctct 549  Q
    |||||    
T  45115909 tctct 45115905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 17697094 - 17696989
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    |||||||||||||||||||||||||  |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| |    
T  17697094 taattttaaaagggaaactgaagttcattgacatgtaaatagtttcaataaataagaaaatgaatagtacacaaaaaagtcctacacattacgggaaact 17696995  T
Q  545 tctctg 550  Q
    ||||||    
T  17696994 tctctg 17696989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 16720080 - 16719974
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcc-tacaaattacggaaaat 543  Q
    |||||||||||||||||||||||||  |||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||     
T  16720080 taattttaaaagggaaactgaagttcattgacatgtaaatagtttcaataaataagaaaatgaatagtacacaaaaaagtccttacacattacggaaaac 16719981  T
Q  544 ttctctg 550  Q
    |||||||    
T  16719980 ttctctg 16719974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 283 - 436
Target Start/End: Complemental strand, 31100504 - 31100350
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaa-ttaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    ||||||||||||||||||||||||||||  ||||||| || || |||||| |||  | |||||||| | | | |||||||||||||||||||||||||||    
T  31100504 actagaccattgacccgtgctaacgcacaggtcattttaagaagttaatattcaccgtaaaaataaaataatatagttcgcttgaatgtaaaaattgtcg 31100405  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    | |||||||||| || | |||||| ||||| ||||||||||||||||||||||||    
T  31100404 taaatcaaagcataacgccaattatcataggctttgttattgttccataattcta 31100350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 32038622 - 32038517
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| || |||||| ||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |    
T  32038622 taattttgaaggggaaattgaagttcgttgacatgcaaatactttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaact 32038523  T
Q  545 tctctg 550  Q
    ||||||    
T  32038522 tctctg 32038517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 445 - 547
Target Start/End: Complemental strand, 5093749 - 5093647
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||| ||||| ||||| |    
T  5093749 taattttaaaagggaaactgaagtacgttgacatgcaaatagtttcaataagtaagaaaatgaataatacaaaaaaaagtcatacacattacagaaaact 5093650  T
Q  545 tct 547  Q
    |||    
T  5093649 tct 5093647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 445 - 547
Target Start/End: Complemental strand, 46909526 - 46909425
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||| |||| |||||| |    
T  46909526 taattttaaaagggaaactgaagttcgttgacatgtaaatagtttcaataagtaagaaaatgaataggacacaaaaaa-tcctacacattatggaaaact 46909428  T
Q  545 tct 547  Q
    |||    
T  46909427 tct 46909425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 283 - 319
Target Start/End: Original strand, 39703883 - 39703919
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcattt 319  Q
    |||||||||| |||||||||||||||||| |||||||    
T  39703883 actagaccatcgacccgtgctaacgcacgggtcattt 39703919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 140; Significance: 5e-73; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 281 - 436
Target Start/End: Original strand, 21581349 - 21581504
Alignment:
Q  281 aaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||    
T  21581349 aaactagaccattgacccgtgctaacgcacatgtcatttaaaaaattaatactcactgaaaaaataagacattgtagttcgcttgaatgtaaaaattatc 21581448  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21581449 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 21581504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 282 - 436
Target Start/End: Complemental strand, 25839686 - 25839531
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaa-ttaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  25839686 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaaattaatactcactgaaaaaataagacactgtagttcgcttgaatgaaaaaattgtc 25839587  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25839586 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 25839531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 283 - 436
Target Start/End: Original strand, 19514961 - 19515114
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcgt 382  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  19514961 actagaccattgacccgtgctaacgcacatgtcatttaaaaaattaatactcaatgaaaaaataagacattgtagttcgcttgaatgtaaaaattatcgt 19515060  T
Q  383 gaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19515061 gaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 19515114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 280 - 436
Target Start/End: Complemental strand, 28389772 - 28389616
Alignment:
Q  280 aaaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattg 378  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||| ||||||||||||||| |||||||||| ||||| |||||||||    
T  28389772 aaaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaagataatattcactgaaaaaataagacattgtagttcgcgtgaatctaaaaattg 28389673  T
Q  379 tcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    | |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  28389672 ttgtgaatcaaagcaaaatgtcaa-taccaaagactttgttattgttccataattcta 28389616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 282 - 436
Target Start/End: Complemental strand, 16909423 - 16909269
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||| ||| ||||||||||||||| |||||||||| ||||| |||||||||||    
T  16909423 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaagataatattcactgaaaaaataagacattgtagttcgcgtgaatctaaaaattgtc 16909324  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||    
T  16909323 gtgaatcaaagcaaaatatcaa-taccaaagactttgttattgttccataattcta 16909269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 282 - 436
Target Start/End: Original strand, 30387763 - 30387916
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    ||||||| ||||||||||||||||||||||||||||||||||||  ||||| ||| |||||| ||||||||||||||||||| ||||| |||||||||||    
T  30387763 aactagatcattgacccgtgctaacgcacgtgtcatttaaaaaagataatattcactgaaaa-ataagacactgtagttcgcgtgaatctaaaaattgtc 30387861  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  30387862 gtgaatcaaagcaaaatgtcaa-taccaaagactttgttattgttccataattcta 30387916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 282 - 436
Target Start/End: Complemental strand, 52683100 - 52682946
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  ||||| ||| |||||||||||||||||||||||||| ||||| |||||||||||    
T  52683100 aactagaccattgacccgtgctaacgcacatgtcatttaaaaaagataatattcactgaaaaaataagacactgtagttcgcgtgaatctaaaaattgtc 52683001  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||| |||||||| || || |||||||||||||||||||||||||||    
T  52683000 gtgaatcaaagcataatgtcaa-tatcaaagactttgttattgttccataattcta 52682946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 279 - 436
Target Start/End: Complemental strand, 21383018 - 21382862
Alignment:
Q  279 taaaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaatt 377  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||| | | |||||||||||||||||||||| ||||| ||||||||    
T  21383018 taaaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaagataatattcact-ataaaataagacactgtagttcgcgtgaatctaaaaatt 21382920  T
Q  378 gtcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  21382919 gtcgtgaatgaaagcaaaatgtcaa-taccaaagactttgttattgttccataattcta 21382862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 282 - 436
Target Start/End: Original strand, 41859605 - 41859759
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    ||||||| ||||||||||||||||||||||||||||||||||||  ||||| ||| ||||||||||||||||||| |||||| ||||| |||||||||||    
T  41859605 aactagatcattgacccgtgctaacgcacgtgtcatttaaaaaagataatattcactgaaaaaataagacactgtcgttcgcgtgaatctaaaaattgtc 41859704  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||| |||||||| || || |||||||||||||||||||||||||||    
T  41859705 gtgaatcaaagcataatgtcaa-tatcaaagactttgttattgttccataattcta 41859759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 280 - 436
Target Start/End: Original strand, 29358944 - 29359100
Alignment:
Q  280 aaaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcattg-aaaaaataagacactgtagttcgcttgaatgtaaaaattg 378  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||| ||| || |||||||||||||||||||||||| ||||| |||||||||    
T  29358944 aaaactagaccattgacccgtgctaacgcacgtgtcatttaaaaagataatattcactggaaaaaataagacactgtagttcgcgtgaatctaaaaattg 29359043  T
Q  379 tcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||||| |||||||| || || ||||||||||||| || ||||||||||    
T  29359044 tcgtgaatcaaagcataatgtcaa-tatcaaagactttgttattatttcataattcta 29359100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 281 - 437
Target Start/End: Complemental strand, 53288678 - 53288521
Alignment:
Q  281 aaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgt 379  Q
    ||||||||||| |||||| |||||||||||| ||||||| || || ||| || ||| || |||||||| ||| |||||||||||||||||||||||||||    
T  53288678 aaactagaccactgacccatgctaacgcacgggtcattttaagaagtaaatattcactgtaaaaataaaacaatgtagttcgcttgaatgtaaaaattgt 53288579  T
Q  380 cgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  53288578 cgtgaatcaaagcataatgtcaattacgatagactttgttattgttccataattctaa 53288521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 283 - 437
Target Start/End: Complemental strand, 42348106 - 42347951
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||| |||||||||||| ||||||| || || ||| || ||| || |||||||| ||| |||||||||||||||||||||||||||||    
T  42348106 actagaccattgacccatgctaacgcacgggtcattttaagaagtaaatattcactgtaaaaataaaacaatgtagttcgcttgaatgtaaaaattgtcg 42348007  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    |||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||    
T  42348006 tgaatcaaagcataatgtcaattacgatagactttattattgttccataattctaa 42347951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 445 - 547
Target Start/End: Complemental strand, 42347919 - 42347817
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  42347919 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaact 42347820  T
Q  545 tct 547  Q
    |||    
T  42347819 tct 42347817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 445 - 542
Target Start/End: Complemental strand, 25839498 - 25839401
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaa 542  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25839498 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaa 25839401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 283 - 437
Target Start/End: Original strand, 31448188 - 31448342
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||| |||||||||||| ||||||| || || ||| || |||| | |||||||| ||| |||||||||||||||||||||||||||||    
T  31448188 actagaccattgacccatgctaacgcacgggtcattttaagaagtaaatattcat-gtaaaaataaaacaatgtagttcgcttgaatgtaaaaattgtcg 31448286  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    |||| |||| || |||||||||||| ||||||||||||||||||||||||||||||    
T  31448287 tgaagcaaaacataatgtcaattacgatagactttgttattgttccataattctaa 31448342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 16909236 - 16909131
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  16909236 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaact 16909137  T
Q  545 tctctg 550  Q
    ||||||    
T  16909136 tctctg 16909131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 28389583 - 28389478
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |    
T  28389583 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtccaacacattacggaaaact 28389484  T
Q  545 tctctg 550  Q
    ||||||    
T  28389483 tctctg 28389478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 52682913 - 52682808
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |    
T  52682913 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaact 52682814  T
Q  545 tctctg 550  Q
    ||||||    
T  52682813 tctctg 52682808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 445 - 550
Target Start/End: Original strand, 19515147 - 19515252
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    |||||||||||||||||||||||||  |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| |    
T  19515147 taattttaaaagggaaactgaagttcattgacatgtaaatagtttcaataaataagaaaatgaatagtacacaaaaaagtcctacacattacgggaaact 19515246  T
Q  545 tctctg 550  Q
    ||||||    
T  19515247 tctctg 19515252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 445 - 550
Target Start/End: Original strand, 21581537 - 21581642
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    |||||||||||||||||||||||||  |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| |    
T  21581537 taattttaaaagggaaactgaagttcattgacatgtaaatagtttcaataaataagaaaatgaatagtacacaaaaaagtcctacacattacgggaaact 21581636  T
Q  545 tctctg 550  Q
    ||||||    
T  21581637 tctctg 21581642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 445 - 550
Target Start/End: Original strand, 30387949 - 30388054
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |    
T  30387949 taattttgaaaggaaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaact 30388048  T
Q  545 tctctg 550  Q
    ||||||    
T  30388049 tctctg 30388054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 445 - 549
Target Start/End: Complemental strand, 21382829 - 21382726
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |    
T  21382829 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacaca-aaaagtcctacacattacggaaaact 21382731  T
Q  545 tctct 549  Q
    |||||    
T  21382730 tctct 21382726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 448 - 547
Target Start/End: Original strand, 31448379 - 31448480
Alignment:
Q  448 ttttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaa--gtcctacaaattacggaaaattt 545  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||   ||||||| ||||||||||| ||    
T  31448379 ttttaaaagggaaactgaagttcgttgacatgcaaataatttcaataagtaagaaaatgaatagtacacaaaaaaagctcctacacattacggaaaactt 31448478  T
Q  546 ct 547  Q
    ||    
T  31448479 ct 31448480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 445 - 547
Target Start/End: Complemental strand, 53288489 - 53288387
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||| ||||| ||||| |    
T  53288489 taattttaaaagggaaactgaagtacgttgacatgcaaatagtttcaataagtaagaaaatgaataatacaaaaaaaagtcatacacattacagaaaact 53288390  T
Q  545 tct 547  Q
    |||    
T  53288389 tct 53288387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 445 - 542
Target Start/End: Original strand, 41859792 - 41859889
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaa 542  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||| ||||    
T  41859792 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcttacacattacgaaaaa 41859889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 445 - 547
Target Start/End: Original strand, 29359133 - 29359235
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    |||||||  |||| ||| ||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||| |    
T  29359133 taattttggaaggcaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacaatacacaaaaaagtcctacacattacggaaaact 29359232  T
Q  545 tct 547  Q
    |||    
T  29359233 tct 29359235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 279 - 317
Target Start/End: Original strand, 49748214 - 49748252
Alignment:
Q  279 taaaactagaccattgacccgtgctaacgcacgtgtcat 317  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  49748214 taaaactagaccatcgacccgtgctaacgcacgggtcat 49748252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642 (Bit Score: 139; Significance: 2e-72; HSPs: 2)
Name: scaffold0642
Description:

Target: scaffold0642; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 282 - 436
Target Start/End: Complemental strand, 3765 - 3611
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||    
T  3765 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcactgaaaaaataaaacattgtagttcgcttgaatgtaaaaattgtcg 3666  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3665 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttctataattcta 3611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 3578 - 3473
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |    
T  3578 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataaataagaaaatgaatagtacacaaaaaagtcctacacattacggaaaact 3479  T
Q  545 tctctg 550  Q
    ||||||    
T  3478 tctctg 3473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 139; Significance: 2e-72; HSPs: 2)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 282 - 436
Target Start/End: Complemental strand, 13677 - 13523
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||    
T  13677 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcactgaaaaaataaaacattgtagttcgcttgaatgtaaaaattgtcg 13578  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13577 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttctataattcta 13523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 13490 - 13385
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |    
T  13490 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataaataagaaaatgaatagtacacaaaaaagtcctacacattacggaaaact 13391  T
Q  545 tctctg 550  Q
    ||||||    
T  13390 tctctg 13385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 139; Significance: 2e-72; HSPs: 2)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 282 - 436
Target Start/End: Original strand, 25304 - 25458
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||    
T  25304 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcactgaaaaaataaaacattgtagttcgcttgaatgtaaaaattgtcg 25403  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  25404 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttctataattcta 25458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 445 - 550
Target Start/End: Original strand, 25491 - 25596
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |    
T  25491 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataaataagaaaatgaatagtacacaaaaaagtcctacacattacggaaaact 25590  T
Q  545 tctctg 550  Q
    ||||||    
T  25591 tctctg 25596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 139; Significance: 2e-72; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 282 - 436
Target Start/End: Original strand, 405896 - 406050
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||||||||| |    
T  405896 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaacttaatactcaccgaaaaaataagacactgtagttcgcttgaatgtaaaaattgttg 405995  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  405996 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 406050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 283 - 436
Target Start/End: Original strand, 18265734 - 18265888
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaa-aattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||| | ||||||||||||||||| |||||||||||    
T  18265734 actagacctttgacccgtgctaacgcacgtgtcatttaaaaaaattaatactcgctgaaaaaataagatattgtagttcgcttgaatgaaaaaattgtcg 18265833  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18265834 tgaatcatagcaaaatgtcaattaccatagactttgttattgttccataattcta 18265888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 283 - 436
Target Start/End: Original strand, 18274747 - 18274901
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaa-aattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||| |||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||| | ||||||||||||||||| |||||||||||    
T  18274747 actagacctttgacccgtgctaacgcacgtgtcatttaaaaaaattaatactcgctgaaaaaataagatattgtagttcgcttgaatgaaaaaattgtcg 18274846  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18274847 tgaatcatagcaaaatgtcaattaccatagactttgttattgttccataattcta 18274901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 283 - 436
Target Start/End: Complemental strand, 19961994 - 19961841
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||| ||||| ||||||   | |    
T  19961994 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaagataatattcattgaaaaaataagacactgtagttcgcgtgaatttaaaaaaatttg 19961895  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  19961894 tgaatcaaagcaaaatgtcaa-taccaaagactttgttattgttccataattcta 19961841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 280 - 436
Target Start/End: Complemental strand, 23828128 - 23827972
Alignment:
Q  280 aaaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattg 378  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||  ||||| ||| ||||||||||||||| |||||||||| ||||| |||||||||    
T  23828128 aaaactagaccattgacccatgctaaggcacgtgtcatttaaaaaagataatattcactgaaaaaataagacattgtagttcgcgtgaatctaaaaattg 23828029  T
Q  379 tcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||    
T  23828028 tcgtgaatcaaagcaatatgtcaa-taccaaagactttgttattgttccataattcta 23827972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 285 - 436
Target Start/End: Complemental strand, 21640242 - 21640092
Alignment:
Q  285 tagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcgtg 383  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||| ||| ||||||| |||||||||||||||||| ||||| ||||||||||||||    
T  21640242 tagaccattgacccgtgctaacgcacgtgtcatttaaaaaagataatattcactgaaaaa-taagacactgtagttcgcgtgaatctaaaaattgtcgtg 21640144  T
Q  384 aatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    ||||||||||||||||||| ||||| ||||| |||||||||| ||||||||||    
T  21640143 aatcaaagcaaaatgtcaa-taccaaagactatgttattgttacataattcta 21640092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 445 - 550
Target Start/End: Original strand, 18265921 - 18266026
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  18265921 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaact 18266020  T
Q  545 tctctg 550  Q
    ||||||    
T  18266021 tctctg 18266026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 445 - 550
Target Start/End: Original strand, 18274934 - 18275039
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  18274934 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaact 18275033  T
Q  545 tctctg 550  Q
    ||||||    
T  18275034 tctctg 18275039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 282 - 437
Target Start/End: Complemental strand, 18492666 - 18492511
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    ||||||||||||||||| |||||||||||| ||||||| ||||| ||| || |||| | |||||||| ||| ||||||||||||||||||||||||||||    
T  18492666 aactagaccattgacccatgctaacgcacgggtcattttaaaaagtaaatattcat-gtaaaaataaaacaatgtagttcgcttgaatgtaaaaattgtc 18492568  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
     |||||||||||| |||||||||||| |||||||||||||||||| |||||||||||    
T  18492567 atgaatcaaagcataatgtcaattacgatagactttgttattgtttcataattctaa 18492511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 283 - 436
Target Start/End: Original strand, 14994215 - 14994366
Alignment:
Q  283 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaa-ttaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtcg 381  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||| ||| ||||||||||||||||  |||||||| ||||| ||||||||||||    
T  14994215 actagaccattgacccgtgctaacgcacgtgtcatttaaaaaagataatattcactgaaaaaataagacac--tagttcgcgtgaatctaaaaattgtcg 14994312  T
Q  382 tgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||||| |||||||| || || |||||||||||||||||| ||||||||    
T  14994313 tgaatcaaagcataatgtcaa-tatcaaagactttgttattgttccgtaattcta 14994366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 282 - 436
Target Start/End: Original strand, 22729620 - 22729773
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaa-ttaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||| ||| || |||||||||||| ||||||| || ||||| |||||||||||    
T  22729620 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaagataatattcactg-aaaaataagacattgtagtttgcgtgaatctaaaaattgtc 22729718  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
     ||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||    
T  22729719 atgaatcaaagcaaaatgtcaa-taccaaagactgtgttattgttccataattcta 22729773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 282 - 436
Target Start/End: Original strand, 41376154 - 41376307
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    ||||||||||||||||||||||||||||||||||||||| ||||  ||||| ||| ||||||| ||| ||||||||||| || ||||| ||||||||||     
T  41376154 aactagaccattgacccgtgctaacgcacgtgtcatttagaaaagataatattcactgaaaaa-taaaacactgtagtttgcgtgaatctaaaaattgtt 41376252  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  41376253 gtgaatcaaagcaaaatgtcaa-taccaaagactttgttattgttccataattcta 41376307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 445 - 550
Target Start/End: Original strand, 406083 - 406188
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |    
T  406083 taattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacgcaaaaaagtcctacacattacggaaaact 406182  T
Q  545 tctctg 550  Q
    ||||||    
T  406183 tctctg 406188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 445 - 547
Target Start/End: Complemental strand, 18492480 - 18492378
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  18492480 taattttaaaagggaaactgaagttcgttgacatgcaaataatttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaact 18492381  T
Q  545 tct 547  Q
    |||    
T  18492380 tct 18492378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 23827939 - 23827834
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |    
T  23827939 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaact 23827840  T
Q  545 tctctg 550  Q
    ||||||    
T  23827839 tctctg 23827834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 282 - 438
Target Start/End: Original strand, 24011590 - 24011746
Alignment:
Q  282 aactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgtc 380  Q
    ||||||||||||||||| |||||||||||  ||||||| || || ||| || |||| | |||||||| ||| ||||||||||||||||||||||||| ||    
T  24011590 aactagaccattgacccatgctaacgcacaggtcattttaagaagtaaatattcat-gtaaaaataaaacaatgtagttcgcttgaatgtaaaaattttc 24011688  T
Q  381 gtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaaa 438  Q
     |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  24011689 ttgaatcaaagcataatgtcaattacgatagactttgttattgttccataattctaaa 24011746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 281 - 437
Target Start/End: Original strand, 37983178 - 37983334
Alignment:
Q  281 aaactagaccattgacccgtgctaacgcacgtgtca-tttaaaaaattaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgt 379  Q
    |||||||||||||||||| |||||||||||| |||| ||||| || | |||| ||| |  |||||||| ||| ||||||||| ||||||||||||||| |    
T  37983178 aaactagaccattgacccatgctaacgcacgggtcattttaagaagtaaatattca-tataaaaataaaacaatgtagttcgtttgaatgtaaaaattat 37983276  T
Q  380 cgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  37983277 cgtgaatcaaagcataatgtcaattacgatagactttgttattgttccataattctaa 37983334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 445 - 547
Target Start/End: Original strand, 24011775 - 24011877
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |    
T  24011775 taattttaaaagggaaactgaagttcgttgacatgcaaataatttcaataagtaagaaaatgaatagtacacaaaaaagtcttacacattacggaaaact 24011874  T
Q  545 tct 547  Q
    |||    
T  24011875 tct 24011877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 445 - 547
Target Start/End: Original strand, 37983366 - 37983468
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |    
T  37983366 taattttaaaagggaaactgaagttcgttgacatgcaaataatttcaataagtaagaaaatgaatagtacacaaaaaagtcatacacattacggaaaact 37983465  T
Q  545 tct 547  Q
    |||    
T  37983466 tct 37983468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 445 - 550
Target Start/End: Original strand, 14994399 - 14994504
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |    
T  14994399 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaact 14994498  T
Q  545 tctctg 550  Q
    ||||||    
T  14994499 tctctg 14994504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 445 - 542
Target Start/End: Original strand, 41376340 - 41376437
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaa 542  Q
    ||||||| ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  41376340 taattttgaaagggaaattgaagttcgttgacatgcaaatattttcaataagtaagaaaatgaatagtacacaaaaaagtcctacacattacggaaaa 41376437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 19961808 - 19961703
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||| ||||| |    
T  19961808 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcagcaagtaagaaaatgaatagtacacaaaaaagtcctacacattacagaaaact 19961709  T
Q  545 tctctg 550  Q
    ||||||    
T  19961708 tctctg 19961703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 445 - 542
Target Start/End: Original strand, 22729806 - 22729903
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaa 542  Q
    ||||||| ||||||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  22729806 taattttgaaagggaaattgaatttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacgtaaaa 22729903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 445 - 513
Target Start/End: Complemental strand, 21640059 - 21639991
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagta 513  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  21640059 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagta 21639991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 282 - 310
Target Start/End: Original strand, 18272788 - 18272816
Alignment:
Q  282 aactagaccattgacccgtgctaacgcac 310  Q
    |||||||||||||||||||||||||||||    
T  18272788 aactagaccattgacccgtgctaacgcac 18272816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 282 - 310
Target Start/End: Original strand, 34893023 - 34893051
Alignment:
Q  282 aactagaccattgacccgtgctaacgcac 310  Q
    |||||||||||||||||||||||||||||    
T  34893023 aactagaccattgacccgtgctaacgcac 34893051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 104; Significance: 1e-51; HSPs: 2)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 279 - 437
Target Start/End: Complemental strand, 2340 - 2182
Alignment:
Q  279 taaaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaattaa-tactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaatt 377  Q
    ||||||||||||||||||||||||||||||||| ||||||| || || ||| || ||| || |||||||| ||| |||||||||||||||||||||| ||    
T  2340 taaaactagaccattgacccgtgctaacgcacgggtcattttaagaagtaaatattcactgtaaaaataaaacaatgtagttcgcttgaatgtaaaa-tt 2242  T
Q  378 gtcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattctaa 437  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2241 gtcgtgaatcaaagcataatgtcaattaccatagactttgttattgttccataattctaa 2182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 2150 - 2045
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||| ||||||||||| |    
T  2150 taattctaaaagggaaactgaagttcgttgacatgcaaatagtttcaacaagtaagaaaatgaatagtatacaaaaaagtgctacacattacggaaaact 2051  T
Q  545 tctctg 550  Q
    ||||||    
T  2050 tctctg 2045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 101; Significance: 8e-50; HSPs: 4)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 281 - 436
Target Start/End: Original strand, 34189 - 34345
Alignment:
Q  281 aaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaa-ttaatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgt 379  Q
    ||||||||| ||||||||||||||||||||| ||||||| || || |||||| ||| ||  ||||||| ||| |||||||||||||||||||||||||||    
T  34189 aaactagacaattgacccgtgctaacgcacgggtcattttaagaagttaatattcactggcaaaataaaacaatgtagttcgcttgaatgtaaaaattgt 34288  T
Q  380 cgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
     ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  34289 tgtgaatcaaagcataatgtcaattaccatagactttgttattgttccataattcta 34345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 281 - 436
Target Start/End: Original strand, 27780 - 27944
Alignment:
Q  281 aaactagaccattgacccgtgctaacgcacgtgtcatttaaaaaa---------ttaatactcattgaaaaaataagacactgtagttcgcttgaatgta 371  Q
    ||||||||||||||||||||||||||||||  ||||||| || ||         |||||| ||| || |||||||| ||| |||||||||||||||||||    
T  27780 aaactagaccattgacccgtgctaacgcacaggtcattttaagaagttaataagttaatattcactggaaaaataaaacaatgtagttcgcttgaatgta 27879  T
Q  372 aaaattgtcgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  27880 aaaattgttgtgaatcaaagcataatgtcaattaccatagacattgttattgttccataattcta 27944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 445 - 530
Target Start/End: Original strand, 27977 - 28062
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctaca 530  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27977 taattttaaaagggaaactgaagtttgttgacatgcatatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctaca 28062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 444 - 530
Target Start/End: Original strand, 34377 - 34463
Alignment:
Q  444 ttaattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctaca 530  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34377 ttaattttaaaagggaaactgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaactcctaca 34463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 445 - 550
Target Start/End: Complemental strand, 45756 - 45651
Alignment:
Q  445 taattttaaaagggaaactgaagtttgttgacatgcaaatagtttcaataagtaagaaaatgaatagtacacaaaaaagtcctacaaattacggaaaatt 544  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |    
T  45756 taattttgaaagggaaattgaagttcgttgacatgcaaatagtttcaataagtaagaaaatgaacagtacacaaaaaagtcctacacattacggaaaact 45657  T
Q  545 tctctg 550  Q
    ||||||    
T  45656 tctctg 45651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 283 - 436
Target Start/End: Complemental strand, 45944 - 45789
Alignment:
Q  283 actagaccattgacccgtgc--taacgcacgtgtcatttaaaaaat-taatactcattgaaaaaataagacactgtagttcgcttgaatgtaaaaattgt 379  Q
    ||||||||||||||||||||  |||||||| |||||||||||||   ||||| ||| ||||||||||||||||| |||||| | ||||| ||||||||||    
T  45944 actagaccattgacccgtgcgttaacgcacatgtcatttaaaaatgataatattcactgaaaaaataagacactttagttcacgtgaatctaaaaattgt 45845  T
Q  380 cgtgaatcaaagcaaaatgtcaattaccatagactttgttattgttccataattcta 436  Q
    |||||||||||||| |||||||| || || |||||||||||||||||||||||||||    
T  45844 cgtgaatcaaagcataatgtcaa-tatcaaagactttgttattgttccataattcta 45789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University