View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8935_low_27 (Length: 229)
Name: NF8935_low_27
Description: NF8935
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8935_low_27 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 29341887 - 29341670
Alignment:
| Q |
12 |
taactaagattgaaatatttggtacatgaataattgaattaggagtgagtgcttatttttaagttctttgtggtcctcaattatgtcacccaccagccct |
111 |
Q |
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| T |
29341887 |
taactaagattgaaatatttggtacatgaataattgaattaggagtgagtgcttatttttaagttctttgtggtcctcaattatgtcacccaccagccct |
29341788 |
T |
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| Q |
112 |
tcactttacctttaattatattgtatatggctttgagggaaagttatagaaatgaaatgaccgttttcacaaatctactatgctcacatatgtctcaaac |
211 |
Q |
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| T |
29341787 |
tcactttacctttaattatattgtatatggctttgagggaaagttatagaaatgaaatgaccgttttcacaaatctactatgctcacatatgtctcacac |
29341688 |
T |
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| Q |
212 |
agtaataagtgattttgt |
229 |
Q |
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| T |
29341687 |
agtaataagtgattttgt |
29341670 |
T |
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