View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8937_high_9 (Length: 422)

Name: NF8937_high_9
Description: NF8937
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8937_high_9
NF8937_high_9
[»] chr6 (2 HSPs)
chr6 (90-413)||(4281449-4281772)
chr6 (35-94)||(4282395-4282453)
[»] chr8 (8 HSPs)
chr8 (117-413)||(31710142-31710439)
chr8 (90-321)||(14674485-14674717)
chr8 (90-233)||(18974332-18974466)
chr8 (228-322)||(20133873-20133967)
chr8 (35-94)||(31709404-31709462)
chr8 (90-126)||(31710091-31710127)
chr8 (58-94)||(14673771-14673808)
chr8 (35-94)||(18973669-18973727)
[»] chr3 (5 HSPs)
chr3 (236-413)||(17594765-17594942)
chr3 (90-233)||(19807219-19807371)
chr3 (92-126)||(12208029-12208063)
chr3 (35-94)||(12208669-12208727)
chr3 (35-94)||(19807976-19808034)
[»] chr2 (1 HSPs)
chr2 (160-413)||(8165820-8166081)
[»] chr5 (1 HSPs)
chr5 (183-370)||(11203450-11203631)
[»] chr4 (2 HSPs)
chr4 (173-322)||(12325739-12325891)
chr4 (90-122)||(12325692-12325724)
[»] chr7 (3 HSPs)
chr7 (90-233)||(5331406-5331542)
chr7 (228-322)||(44358104-44358198)
chr7 (35-94)||(5332147-5332205)
[»] scaffold0076 (1 HSPs)
scaffold0076 (173-322)||(47845-47997)
[»] scaffold0130 (1 HSPs)
scaffold0130 (355-413)||(17315-17373)
[»] scaffold0208 (1 HSPs)
scaffold0208 (270-310)||(343-383)


Alignment Details
Target: chr6 (Bit Score: 288; Significance: 1e-161; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 90 - 413
Target Start/End: Complemental strand, 4281772 - 4281449
Alignment:
90 ttcatatctgcattggtttttcggtggatatatatatgcactgtgctgcaattggcttatagttttttggcaataatctagtatgataatggatattttg 189  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
4281772 ttcatatctgcattggtttttcggtagatatatatatgcactgtgctgcaattggcttatagttttttggcaataatctagtatgataatggatattttg 4281673  T
190 gagacaataggttggaccttcatccctgatttcattaatactacaacaagggtgttgtacttcctacgtaattttcagggcctcaagattcaacaaatga 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
4281672 gagacaataggttggaccttcatccctgatttcattaatactacagcaagggtgttgtacttcctacgtaattttcagggcctcaagattcaacaaacga 4281573  T
290 actgaatttctcatctccatcagcccagttatcggtaaatgaagtggagtgtgtggctttctctcaacgccaacgacgtcacgaagatccgaccgacggt 389  Q
    ||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||    
4281572 actcaatttctcatctccatcagcccggttatcggtaaatgaagtgtagtgtgtggctttctctcaacgccaacgacgtcacgaagatccgaccgacagt 4281473  T
390 ggaggtcaattcatcaccaccata 413  Q
    |||||||||||| |||||| ||||    
4281472 ggaggtcaattcgtcaccatcata 4281449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 4282453 - 4282395
Alignment:
35 taaatatcagtaatactgtgccacaggttgttactttctaactttgtt-ctctccgttcat 94  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||||| ||||||||||||    
4282453 taaatatcagtaataccgtgtca--ggttgttactttctaactttgttactctccgttcat 4282395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 242; Significance: 1e-134; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 117 - 413
Target Start/End: Original strand, 31710142 - 31710439
Alignment:
117 atatatatatgcactgtgctgcaattggcttatagtttt-ttggcaataatctagtatgataatggatattttggagacaataggttggaccttcatccc 215  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
31710142 atatatatatgcactgtgctgcaattggcttatagtttttttggcaataatctagtatgataattgatattttggagacaataggttggaccttcatccc 31710241  T
216 tgatttcattaatactacaacaagggtgttgtacttcctacgtaattttcagggcctcaagattcaacaaatgaactgaatttctcatctccatcagccc 315  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |    
31710242 tgatttcattaatactacagcaagggtgttgtacttcctaagtaattttcagggcctcaagattcaacaaacgaactcaatttctcatctccatcagctc 31710341  T
316 agttatcggtaaatgaagtggagtgtgtggctttctctcaacgccaacgacgtcacgaagatccgaccgacggtggaggtcaattcatcaccaccata 413  Q
     ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||| ||||    
31710342 ggttatcggtaaatgaagtggaatgtgtggctttctctcaacgccaacgacgtcacgaagatccgaccgacagtggagctcaattcgtcaccatcata 31710439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 90 - 321
Target Start/End: Original strand, 14674485 - 14674717
Alignment:
90 ttcatatctgcattggtttttcggtggatatatatatgcactgtgctgcaattggcttatagtttt-ttggcaataatctagtatgataatggatatttt 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||    
14674485 ttcatatctgcattggtttttcggtggatatatatatgcactgtgctgcaattggcttatagtttttttggcaatagtctagtatgataattgatatttt 14674584  T
189 ggagacaataggttggaccttcatccctgatttcattaatactacaacaagggtgttgtacttcctacgtaattttcagggcctcaagattcaacaaatg 288  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||      
14674585 ggagacaataggttggacattcatccctgatttcattaatactacagcaaggttgttgtacttcctaagtaattttcagggcctcaagattcaacaaaca 14674684  T
289 aactgaatttctcatctccatcagcccagttat 321  Q
    |||| ||||||||| || ||||| ||| |||||    
14674685 aactcaatttctcacctacatcaacccggttat 14674717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 90 - 233
Target Start/End: Original strand, 18974332 - 18974466
Alignment:
90 ttcatatctgcattggtttttcggtggatatatatatgcactgtgctgcaattggcttatagtttttt-ggcaataatctagtatgataatggatatttt 188  Q
    ||||||||||||||||||||||||||||||||||||||||||           ||||||||||||||| || ||||||||||||||||||||||||||||    
18974332 ttcatatctgcattggtttttcggtggatatatatatgcacta----------ggcttatagtttttttggaaataatctagtatgataatggatatttt 18974421  T
189 ggagacaataggttggaccttcatccctgatttcattaatactac 233  Q
    |||||||||||||||||| ||||||| |||||  |||| ||||||    
18974422 ggagacaataggttggactttcatccttgattctattactactac 18974466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 228 - 322
Target Start/End: Complemental strand, 20133967 - 20133873
Alignment:
228 tactacaacaagggtgttgtacttcctacgtaattttcagggcctcaagattcaacaaatgaactgaatttctcatctccatcagcccagttatc 322  Q
    ||||||| | ||||| |||||||||||| |||||||||||| |||||||||||||||||  |||| ||||||||| || ||||| ||| ||||||    
20133967 tactacagccagggtattgtacttcctaagtaattttcaggacctcaagattcaacaaacaaactcaatttctcacctacatcaacccggttatc 20133873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 31709404 - 31709462
Alignment:
35 taaatatcagtaatactgtgccacaggttgttactttctaactttgtt-ctctccgttcat 94  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||||| ||||||||||||    
31709404 taaatatcagtaataccgtgtca--ggttgttactttctaactttgttactctccgttcat 31709462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 31710091 - 31710127
Alignment:
90 ttcatatctgcattggtttttcggtggatatatatat 126  Q
    |||||||| ||||||||||||||||||||||||||||    
31710091 ttcatatccgcattggtttttcggtggatatatatat 31710127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 94
Target Start/End: Original strand, 14673771 - 14673808
Alignment:
58 caggttgttactttctaactttgtt-ctctccgttcat 94  Q
    ||||||||||||||||||||||||| ||||||||||||    
14673771 caggttgttactttctaactttgttactctccgttcat 14673808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 18973669 - 18973727
Alignment:
35 taaatatcagtaatactgtgccacaggttgttactttctaactttgtt-ctctccgttcat 94  Q
    |||||||||||||||| ||| ||  |||||||||||| |||||||||| ||||||||||||    
18973669 taaatatcagtaataccgtgtca--ggttgttactttgtaactttgttactctccgttcat 18973727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 130; Significance: 3e-67; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 236 - 413
Target Start/End: Original strand, 17594765 - 17594942
Alignment:
236 caagggtgttgtacttcctacgtaattttcagggcctcaagattcaacaaatgaactgaatttctcatctccatcagcccagttatcggtaaatgaagtg 335  Q
    |||||||||| ||||||||| |||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||  |||||||||||||||||||    
17594765 caagggtgttatacttcctaagtaattttcaggtcctcaagattcaacaaacgaactcaatttctcatctccatcagcctggttatcggtaaatgaagtg 17594864  T
336 gagtgtgtggctttctctcaacgccaacgacgtcacgaagatccgaccgacggtggaggtcaattcatcaccaccata 413  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||| ||||    
17594865 gaatgtgtggctttctctcaacgccaacgacgtcacgaagatccgaccgacagtggagctcaattcgtcaccatcata 17594942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 90 - 233
Target Start/End: Complemental strand, 19807371 - 19807219
Alignment:
90 ttcatatctgcattggtttttcggtggatatatatatgcactgtgct--------gcaattggcttatagtttttt-ggcaataatctagtatgataatg 180  Q
    ||||||| ||||||||||||||||||||||||||||||||||  | |        ||| | ||||||||||||||| || ||||||||||||||||||||    
19807371 ttcatatatgcattggtttttcggtggatatatatatgcactaggatatatatatgcactaggcttatagtttttttggaaataatctagtatgataatg 19807272  T
181 gatattttggagacaataggttggaccttcatccctgatttcattaatactac 233  Q
    |||||||||||||||||||||||||| ||||||| |||||  |||| ||||||    
19807271 gatattttggagacaataggttggactttcatccttgattctattactactac 19807219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 126
Target Start/End: Original strand, 12208029 - 12208063
Alignment:
92 catatctgcattggtttttcggtggatatatatat 126  Q
    |||||||||||||||||||||||||||||||||||    
12208029 catatctgcattggtttttcggtggatatatatat 12208063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 12208727 - 12208669
Alignment:
35 taaatatcagtaatactgtgccacaggttgttactttctaactttgtt-ctctccgttcat 94  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||||| ||||||||||||    
12208727 taaatatcagtaataccgtgtca--ggttgttactttctaactttgttactctccgttcat 12208669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 19808034 - 19807976
Alignment:
35 taaatatcagtaatactgtgccacaggttgttactttctaactttgtt-ctctccgttcat 94  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||||| ||||||||||||    
19808034 taaatatcagtaataccgtgtca--ggttgttactttctaactttgttactctccgttcat 19807976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 160 - 413
Target Start/End: Original strand, 8165820 - 8166081
Alignment:
160 caataatctagtatgataatggatattttggagacaataggttggaccttcatccctgatttcattaatactacaacaagggtgttgtacttcctacgta 259  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||| ||||   ||| |||||| |||||| |||    
8165820 caataatctagtatgataattgatattttggagacaataggttggaccttcattcttgatttcattaataccacaa---gggcgttgtatttcctaagta 8165916  T
260 attttcagggcctcaagattcaacaaatgaactgaatttctcatctccatcagcccagttatcggtaaa-----------tgaagtggagtgtgtggctt 348  Q
    |||||||||||||||||||||||| |||||||| |||||||||| |||| || ||| ||||||||||||            |||||||| |||| |||||    
8165917 attttcagggcctcaagattcaacgaatgaactcaatttctcatttccaacaacccggttatcggtaaaggaagtggaatggaagtggaatgtgcggctt 8166016  T
349 tctctcaacgccaacgacgtcacgaagatccgaccgacggtggaggtcaattcatcaccaccata 413  Q
    ||||||||| |||||||||||||||||||| || |||| ||||||  |||||| |||||| ||||    
8166017 tctctcaacaccaacgacgtcacgaagatctgatcgacagtggagcccaattcgtcaccatcata 8166081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 183 - 370
Target Start/End: Original strand, 11203450 - 11203631
Alignment:
183 tattttggagacaataggttggaccttcatccctgatttcattaatactacaacaagggtgttgtacttcctacgtaattttcagggcctcaagattcaa 282  Q
    |||| |||||||||||| |||||| ||||||| ||||||||||| ||||||| ||| ||| |||||||||||| ||||||||||||||||||||||||||    
11203450 tattctggagacaatagattggactttcatccttgatttcattactactacagcaaaggtattgtacttcctaagtaattttcagggcctcaagattcaa 11203549  T
283 caaatgaactgaatttctcatctccatcagcccagttatcggtaaatgaagtggagtgtgtggctttctctcaacgccaacgacgtca 370  Q
    |||||||||| || |||||  || ||||| ||| ||||||     ||  |||| | ||| ||||||||||||||||||||||||||||    
11203550 caaatgaactcaacttctcccctacatcaacccggttatc-----at-cagtgaaatgtatggctttctctcaacgccaacgacgtca 11203631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 173 - 322
Target Start/End: Original strand, 12325739 - 12325891
Alignment:
173 tgataatggatattttggagacaataggttggaccttcatccctgatt---tcattaatactacaacaagggtgttgtacttcctacgtaattttcaggg 269  Q
    |||||||  ||||| |||||||||||| |||||| ||||||| |||||   | | || ||||||| ||||||| |||||||||||| |||||||||||||    
12325739 tgataattaatattctggagacaatagattggactttcatccttgattctattactactactacagcaagggtattgtacttcctaagtaattttcaggg 12325838  T
270 cctcaagattcaacaaatgaactgaatttctcatctccatcagcccagttatc 322  Q
    ||||||||||||||||| ||||| ||||||||| || ||||| ||| ||||||    
12325839 cctcaagattcaacaaacgaactcaatttctcacctacatcaacccggttatc 12325891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 122
Target Start/End: Original strand, 12325692 - 12325724
Alignment:
90 ttcatatctgcattggtttttcggtggatatat 122  Q
    |||||||||||||||||||||||||||||||||    
12325692 ttcatatctgcattggtttttcggtggatatat 12325724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 5e-29; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 90 - 233
Target Start/End: Complemental strand, 5331542 - 5331406
Alignment:
90 ttcatatctgcattggtttttcggtggatatatatatgcactgtgctgcaattggcttatagtttttt---ggcaataatctagtatgataatggatatt 186  Q
    ||||||||||||||||||||||||||||||||||||||||||           |||||||||||||||   || |||||||||||||||||| |||||||    
5331542 ttcatatctgcattggtttttcggtggatatatatatgcacta----------ggcttatagtttttttttggaaataatctagtatgataagggatatt 5331453  T
187 ttggagacaataggttggaccttcatccctgatttcattaatactac 233  Q
    |||||||||||||||||||| ||||||| |||||  |||| ||||||    
5331452 ttggagacaataggttggactttcatccttgattctattactactac 5331406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 44358104 - 44358198
Alignment:
228 tactacaacaagggtgttgtacttcctacgtaattttcagggcctcaagattcaacaaatgaactgaatttctcatctccatcagcccagttatc 322  Q
    ||||||| | ||||| |||||||||||| |||||||||||| |||||||||||||||||  |||| ||||||||| || ||||| ||| ||||||    
44358104 tactacagccagggtattgtacttcctaagtaattttcaggacctcaagattcaacaaacaaactcaatttctcacctacatcaacccggttatc 44358198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 5332205 - 5332147
Alignment:
35 taaatatcagtaatactgtgccacaggttgttactttctaactttgtt-ctctccgttcat 94  Q
    |||||||||||||||| ||| ||  ||||||||||||||||||||||| ||||||||||||    
5332205 taaatatcagtaataccgtgtca--ggttgttactttctaactttgttactctccgttcat 5332147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 173 - 322
Target Start/End: Original strand, 47845 - 47997
Alignment:
173 tgataatggatattttggagacaataggttggaccttcatccctgatt---tcattaatactacaacaagggtgttgtacttcctacgtaattttcaggg 269  Q
    |||||||  ||||| |||||||||||| |||||| ||||||| |||||   | | || ||||||| |||| || |||||||||||| |||||||||||||    
47845 tgataattaatattctggagacaatagattggactttcatccttgattctattactactactacagcaagagtattgtacttcctaagtaattttcaggg 47944  T
270 cctcaagattcaacaaatgaactgaatttctcatctccatcagcccagttatc 322  Q
    ||||||||||||||||| ||||| ||||||||| || ||||| ||| ||||||    
47945 cctcaagattcaacaaacgaactcaatttctcacctacatcaacccggttatc 47997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 355 - 413
Target Start/End: Complemental strand, 17373 - 17315
Alignment:
355 aacgccaacgacgtcacgaagatccgaccgacggtggaggtcaattcatcaccaccata 413  Q
    ||||||||||||||||||||||| |||||||| |||||| ||||||| |||||| ||||    
17373 aacgccaacgacgtcacgaagatacgaccgacagtggagttcaattcgtcaccatcata 17315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 270 - 310
Target Start/End: Complemental strand, 383 - 343
Alignment:
270 cctcaagattcaacaaatgaactgaatttctcatctccatc 310  Q
    |||||||||||||||||  |||| |||||||||||||||||    
383 cctcaagattcaacaaacaaactcaatttctcatctccatc 343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University