View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8937_low_1 (Length: 1532)

Name: NF8937_low_1
Description: NF8937
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8937_low_1
NF8937_low_1
[»] chr1 (70 HSPs)
chr1 (802-1516)||(49979544-49980266)
chr1 (18-484)||(49980989-49981462)
chr1 (556-738)||(49980737-49980917)
chr1 (1043-1176)||(38190849-38190992)
chr1 (1078-1176)||(43384521-43384622)
chr1 (737-804)||(49980547-49980614)
chr1 (1043-1176)||(49979878-49980017)
chr1 (1043-1174)||(38190844-38190985)
chr1 (1078-1176)||(40960777-40960878)
chr1 (1072-1167)||(13219449-13219549)
chr1 (1117-1176)||(46580827-46580886)
chr1 (1082-1176)||(13219418-13219517)
chr1 (1118-1176)||(12030312-12030370)
chr1 (1078-1176)||(37255127-37255228)
chr1 (1078-1164)||(45239004-45239093)
chr1 (1043-1162)||(40960754-40960883)
chr1 (1078-1178)||(8751431-8751534)
chr1 (1117-1178)||(35049931-35049992)
chr1 (1072-1176)||(43020333-43020440)
chr1 (1078-1145)||(4682969-4683039)
chr1 (1078-1164)||(31909787-31909876)
chr1 (1079-1174)||(38824294-38824392)
chr1 (1082-1176)||(21909883-21909980)
chr1 (1078-1164)||(31909762-31909851)
chr1 (1078-1176)||(38824329-38824430)
chr1 (1078-1115)||(48636756-48636793)
chr1 (1078-1171)||(50144145-50144241)
chr1 (1079-1176)||(52253577-52253677)
chr1 (1072-1164)||(27549077-27549172)
chr1 (1078-1145)||(42140370-42140438)
chr1 (1042-1170)||(43384491-43384628)
chr1 (1078-1176)||(4838312-4838411)
chr1 (1078-1145)||(29070655-29070725)
chr1 (1078-1145)||(34037958-34038028)
chr1 (1078-1176)||(47011282-47011383)
chr1 (1072-1174)||(24478668-24478773)
chr1 (1078-1175)||(24478703-24478803)
chr1 (1078-1164)||(25378270-25378359)
chr1 (1078-1176)||(25378295-25378396)
chr1 (1079-1145)||(34953935-34954004)
chr1 (1042-1176)||(37255121-37255265)
chr1 (1042-1103)||(46580821-46580889)
chr1 (1072-1175)||(38847334-38847440)
chr1 (1078-1176)||(4838349-4838448)
chr1 (1078-1178)||(5852726-5852829)
chr1 (1078-1178)||(6763333-6763436)
chr1 (1078-1145)||(28237104-28237174)
chr1 (1078-1178)||(46517944-46518047)
chr1 (1078-1145)||(48605108-48605178)
chr1 (1078-1145)||(1252163-1252233)
chr1 (1090-1176)||(4974095-4974184)
chr1 (1078-1164)||(8751470-8751559)
chr1 (1082-1145)||(12993556-12993622)
chr1 (1078-1145)||(34061981-34062051)
chr1 (1078-1145)||(39015601-39015671)
chr1 (1117-1176)||(40328952-40329011)
chr1 (1043-1176)||(52253539-52253682)
chr1 (1078-1145)||(52923361-52923431)
chr1 (1079-1145)||(15351754-15351823)
chr1 (1078-1164)||(27552268-27552357)
chr1 (1078-1176)||(43020370-43020471)
chr1 (1079-1176)||(50144178-50144278)
chr1 (1072-1114)||(51796709-51796751)
chr1 (1118-1178)||(2091745-2091805)
chr1 (1072-1113)||(7230126-7230167)
chr1 (1078-1178)||(12062193-12062296)
chr1 (1117-1174)||(21909844-21909901)
chr1 (1078-1183)||(31327561-31327669)
chr1 (1071-1112)||(41161533-41161574)
chr1 (1072-1145)||(42761265-42761341)
[»] scaffold0756 (2 HSPs)
scaffold0756 (1042-1176)||(3519-3663)
scaffold0756 (1042-1176)||(3513-3657)
[»] scaffold0542 (2 HSPs)
scaffold0542 (1041-1176)||(3408-3553)
scaffold0542 (1043-1176)||(3415-3558)
[»] chr8 (44 HSPs)
chr8 (1043-1176)||(19293017-19293160)
chr8 (1043-1176)||(19293012-19293155)
chr8 (1041-1176)||(14052952-14053097)
chr8 (1078-1176)||(33934080-33934179)
chr8 (1042-1170)||(33934074-33934210)
chr8 (1041-1176)||(14052959-14053104)
chr8 (1078-1176)||(42631780-42631881)
chr8 (1078-1172)||(5419520-5419617)
chr8 (1078-1176)||(43483933-43484034)
chr8 (1079-1178)||(13832047-13832149)
chr8 (1078-1145)||(3611801-3611871)
chr8 (1078-1145)||(8568858-8568928)
chr8 (1078-1164)||(37922850-37922939)
chr8 (1079-1145)||(43295920-43295989)
chr8 (1072-1145)||(24418913-24418988)
chr8 (1072-1145)||(40802235-40802311)
chr8 (1079-1176)||(42631818-42631916)
chr8 (1078-1174)||(5419553-5419652)
chr8 (1078-1145)||(41177996-41178066)
chr8 (1078-1145)||(35063498-35063568)
chr8 (1078-1164)||(35969700-35969789)
chr8 (1117-1176)||(40962061-40962120)
chr8 (1090-1176)||(40716747-40716836)
chr8 (1121-1174)||(9303307-9303360)
chr8 (1079-1164)||(34194599-34194687)
chr8 (1079-1176)||(43483971-43484071)
chr8 (1079-1162)||(7258624-7258711)
chr8 (1078-1113)||(1875726-1875761)
chr8 (1078-1113)||(9203451-9203486)
chr8 (1078-1164)||(27781922-27782011)
chr8 (1082-1145)||(28882696-28882762)
chr8 (1078-1164)||(38883959-38884048)
chr8 (1078-1145)||(39655449-39655519)
chr8 (1079-1145)||(13964458-13964527)
chr8 (1078-1164)||(34194573-34194662)
chr8 (1078-1176)||(35063462-35063562)
chr8 (1079-1145)||(43295927-43295996)
chr8 (1078-1162)||(5040083-5040170)
chr8 (1079-1144)||(5040107-5040175)
chr8 (1079-1164)||(7256926-7257014)
chr8 (1078-1115)||(12955541-12955578)
chr8 (1117-1174)||(15715107-15715164)
chr8 (1078-1138)||(42149165-42149228)
chr8 (1079-1144)||(44282298-44282366)
[»] chr4 (75 HSPs)
chr4 (1043-1176)||(54786983-54787126)
chr4 (1043-1176)||(54786978-54787121)
chr4 (1072-1178)||(20542802-20542911)
chr4 (1078-1176)||(21003941-21004042)
chr4 (1079-1176)||(24275218-24275318)
chr4 (1072-1176)||(40952540-40952647)
chr4 (1118-1176)||(20541174-20541232)
chr4 (1079-1176)||(40952578-40952678)
chr4 (1078-1176)||(51126106-51126207)
chr4 (1078-1178)||(51834569-51834672)
chr4 (1072-1176)||(21003972-21004079)
chr4 (1082-1174)||(42013149-42013244)
chr4 (1043-1145)||(24529605-24529717)
chr4 (1078-1164)||(25856023-25856112)
chr4 (1078-1176)||(44639784-44639885)
chr4 (1084-1176)||(9968302-9968397)
chr4 (1078-1178)||(26206593-26206696)
chr4 (1078-1177)||(55501240-55501342)
chr4 (1079-1145)||(11583746-11583815)
chr4 (1043-1174)||(20541098-20541237)
chr4 (1118-1176)||(22624473-22624531)
chr4 (1078-1176)||(30279141-30279242)
chr4 (1078-1164)||(51126143-51126232)
chr4 (1079-1162)||(23599794-23599880)
chr4 (1079-1175)||(24275256-24275355)
chr4 (1078-1174)||(33084755-33084853)
chr4 (1077-1145)||(48042628-48042699)
chr4 (1079-1174)||(50038489-50038587)
chr4 (1079-1174)||(50045711-50045809)
chr4 (1078-1164)||(23329383-23329472)
chr4 (1117-1176)||(23599859-23599918)
chr4 (1072-1162)||(30162643-30162736)
chr4 (1117-1172)||(51834536-51834591)
chr4 (1078-1164)||(13743871-13743960)
chr4 (1078-1164)||(23329408-23329497)
chr4 (1078-1176)||(23710836-23710937)
chr4 (1078-1164)||(29978530-29978619)
chr4 (1078-1176)||(50038451-50038552)
chr4 (1078-1176)||(50045673-50045774)
chr4 (1079-1145)||(50519301-50519370)
chr4 (1079-1176)||(20542842-20542942)
chr4 (1079-1164)||(25856049-25856137)
chr4 (1072-1145)||(32112346-32112422)
chr4 (1072-1145)||(36469903-36469979)
chr4 (1091-1176)||(46779345-46779433)
chr4 (1080-1164)||(53551608-53551695)
chr4 (1078-1145)||(5535746-5535815)
chr4 (1078-1170)||(33659810-33659905)
chr4 (1082-1174)||(39754141-39754236)
chr4 (1123-1175)||(48902046-48902098)
chr4 (1090-1145)||(4484106-4484164)
chr4 (1115-1178)||(15133912-15133975)
chr4 (1078-1176)||(24529611-24529712)
chr4 (1079-1145)||(42013185-42013254)
chr4 (1079-1164)||(13743897-13743985)
chr4 (1079-1176)||(18327935-18328035)
chr4 (1079-1176)||(18437364-18437464)
chr4 (1079-1145)||(19934670-19934739)
chr4 (1079-1145)||(25700496-25700565)
chr4 (1078-1164)||(27080057-27080144)
chr4 (1078-1164)||(30051381-30051470)
chr4 (1079-1176)||(34709614-34709714)
chr4 (1118-1176)||(37306933-37306991)
chr4 (1078-1164)||(41788959-41789048)
chr4 (1082-1164)||(43635849-43635934)
chr4 (1080-1138)||(53508540-53508601)
chr4 (1079-1145)||(54164845-54164914)
chr4 (1117-1178)||(5289701-5289762)
chr4 (1079-1112)||(10308308-10308341)
chr4 (1122-1162)||(11843973-11844014)
chr4 (1129-1170)||(22624430-22624471)
chr4 (1078-1178)||(23710873-23710976)
chr4 (1072-1145)||(31860683-31860759)
chr4 (1078-1155)||(33693991-33694071)
chr4 (1117-1174)||(34827552-34827609)
[»] chr7 (61 HSPs)
chr7 (1043-1174)||(40211155-40211296)
chr7 (1043-1176)||(31549794-31549937)
chr7 (1079-1176)||(39970158-39970258)
chr7 (1042-1176)||(31549788-31549932)
chr7 (1042-1176)||(39970152-39970296)
chr7 (1042-1176)||(3838114-3838258)
chr7 (1043-1176)||(3838120-3838263)
chr7 (1117-1176)||(32941857-32941916)
chr7 (1035-1176)||(40211140-40211291)
chr7 (1078-1164)||(33471503-33471592)
chr7 (1078-1176)||(3498295-3498396)
chr7 (1090-1174)||(32389205-32389292)
chr7 (1078-1178)||(45833228-45833331)
chr7 (1078-1174)||(46477171-46477270)
chr7 (1079-1178)||(47778428-47778530)
chr7 (1078-1164)||(37066195-37066284)
chr7 (1078-1176)||(37066220-37066321)
chr7 (1079-1164)||(3498333-3498421)
chr7 (1078-1178)||(46477132-46477235)
chr7 (1079-1176)||(46578304-46578404)
chr7 (1117-1181)||(1741876-1741940)
chr7 (1078-1174)||(35593644-35593743)
chr7 (1078-1176)||(10595529-10595630)
chr7 (1078-1145)||(11032335-11032405)
chr7 (1078-1164)||(19531991-19532080)
chr7 (1078-1145)||(35160781-35160851)
chr7 (1078-1176)||(36711577-36711678)
chr7 (1078-1164)||(18732250-18732337)
chr7 (1078-1162)||(27163203-27163291)
chr7 (1078-1176)||(46658770-46658871)
chr7 (1117-1174)||(13846713-13846770)
chr7 (1117-1174)||(18732216-18732272)
chr7 (1072-1145)||(27942357-27942433)
chr7 (1042-1145)||(30005871-30005984)
chr7 (1042-1114)||(32941843-32941922)
chr7 (1079-1164)||(33471529-33471617)
chr7 (1079-1155)||(23797387-23797466)
chr7 (1118-1162)||(41095207-41095251)
chr7 (1072-1164)||(46221110-46221205)
chr7 (1117-1161)||(47778509-47778553)
chr7 (1072-1175)||(48392868-48392974)
chr7 (1078-1145)||(12274847-12274917)
chr7 (1078-1164)||(28003216-28003305)
chr7 (1117-1176)||(33784061-33784120)
chr7 (1078-1176)||(35160787-35160888)
chr7 (1078-1145)||(41699088-41699158)
chr7 (1117-1176)||(46774595-46774654)
chr7 (1080-1114)||(1742231-1742265)
chr7 (1117-1175)||(5691556-5691614)
chr7 (1078-1164)||(19531966-19532055)
chr7 (1078-1164)||(24211564-24211653)
chr7 (1079-1144)||(27242447-27242515)
chr7 (1078-1176)||(28003179-28003280)
chr7 (1082-1164)||(35593683-35593768)
chr7 (1079-1145)||(43813157-43813226)
chr7 (1072-1145)||(7208696-7208772)
chr7 (1117-1174)||(20353060-20353117)
chr7 (1090-1162)||(27163179-27163255)
chr7 (1071-1112)||(28306383-28306424)
chr7 (1079-1176)||(45833191-45833291)
chr7 (1042-1075)||(46774525-46774558)
[»] chr2 (53 HSPs)
chr2 (1042-1181)||(4637002-4637151)
chr2 (1078-1176)||(37396205-37396306)
chr2 (1079-1176)||(4637008-4637108)
chr2 (1042-1170)||(37396199-37396337)
chr2 (1072-1176)||(9071206-9071313)
chr2 (1077-1176)||(5580251-5580353)
chr2 (1079-1176)||(9071244-9071344)
chr2 (1072-1176)||(10041543-10041650)
chr2 (1078-1178)||(20195288-20195391)
chr2 (1117-1176)||(19822379-19822438)
chr2 (1117-1176)||(19842600-19842659)
chr2 (1119-1176)||(9895264-9895321)
chr2 (1117-1174)||(40534669-40534726)
chr2 (1078-1172)||(30202489-30202586)
chr2 (1078-1176)||(4898166-4898267)
chr2 (1078-1176)||(4945560-4945661)
chr2 (1078-1164)||(32070474-32070563)
chr2 (1082-1176)||(37486041-37486138)
chr2 (1079-1176)||(5580289-5580389)
chr2 (1129-1178)||(9895209-9895258)
chr2 (1119-1176)||(15178015-15178072)
chr2 (1072-1164)||(17843964-17844059)
chr2 (1072-1174)||(29712519-29712623)
chr2 (1079-1176)||(42579058-42579158)
chr2 (1072-1176)||(32473472-32473579)
chr2 (1072-1164)||(43514788-43514883)
chr2 (1078-1176)||(10099553-10099654)
chr2 (1079-1184)||(5094833-5094941)
chr2 (1082-1176)||(8554672-8554769)
chr2 (1078-1164)||(10099590-10099679)
chr2 (1078-1164)||(40739530-40739619)
chr2 (1117-1174)||(40534445-40534502)
chr2 (1090-1145)||(11153237-11153295)
chr2 (1078-1138)||(17378093-17378156)
chr2 (1078-1174)||(32070499-32070598)
chr2 (1078-1178)||(34911097-34911200)
chr2 (1078-1145)||(41824293-41824362)
chr2 (1078-1145)||(2795342-2795412)
chr2 (1078-1160)||(3197974-3198060)
chr2 (1078-1176)||(25668449-25668550)
chr2 (1078-1145)||(27327868-27327938)
chr2 (1078-1164)||(5144306-5144395)
chr2 (1078-1164)||(24971218-24971307)
chr2 (1078-1164)||(43514769-43514858)
chr2 (1078-1174)||(5144271-5144370)
chr2 (1079-1164)||(10041581-10041669)
chr2 (1117-1170)||(27743696-27743749)
chr2 (1117-1174)||(28680919-28680976)
chr2 (1072-1113)||(30905191-30905232)
chr2 (1118-1178)||(31175079-31175140)
chr2 (1117-1174)||(38262065-38262122)
chr2 (1078-1115)||(41823806-41823843)
chr2 (1117-1178)||(45095515-45095575)
[»] chr3 (42 HSPs)
chr3 (1078-1176)||(22528890-22528991)
chr3 (1079-1178)||(22528851-22528953)
chr3 (1043-1176)||(54726051-54726194)
chr3 (1078-1176)||(22995734-22995835)
chr3 (1072-1178)||(26043249-26043358)
chr3 (1118-1176)||(1043908-1043966)
chr3 (1079-1171)||(52638040-52638134)
chr3 (1079-1178)||(29076524-29076626)
chr3 (1117-1176)||(1044003-1044062)
chr3 (1078-1145)||(32589347-32589417)
chr3 (1078-1176)||(17004959-17005062)
chr3 (1072-1176)||(19678963-19679070)
chr3 (1078-1138)||(39530434-39530497)
chr3 (1082-1145)||(4181973-4182039)
chr3 (1078-1176)||(22995697-22995798)
chr3 (1078-1145)||(40326470-40326540)
chr3 (1090-1177)||(42595787-42595877)
chr3 (1090-1176)||(37331601-37331689)
chr3 (1078-1164)||(44435187-44435276)
chr3 (1043-1176)||(54726056-54726199)
chr3 (1072-1145)||(1086541-1086617)
chr3 (1078-1178)||(7933517-7933620)
chr3 (1078-1178)||(18480914-18481017)
chr3 (1117-1174)||(43333922-43333979)
chr3 (1042-1176)||(55198611-55198744)
chr3 (1081-1145)||(12744933-12745000)
chr3 (1078-1145)||(16127786-16127856)
chr3 (1072-1176)||(21659170-21659277)
chr3 (1072-1164)||(39289593-39289688)
chr3 (1118-1174)||(43898096-43898152)
chr3 (1072-1176)||(46739308-46739415)
chr3 (1117-1161)||(52638113-52638157)
chr3 (1078-1145)||(16127780-16127850)
chr3 (1078-1164)||(21659151-21659240)
chr3 (1090-1145)||(26121571-26121629)
chr3 (1090-1145)||(26244412-26244470)
chr3 (1090-1145)||(27102157-27102215)
chr3 (1082-1163)||(4181944-4182029)
chr3 (1079-1113)||(17501472-17501506)
chr3 (1117-1175)||(32146466-32146524)
chr3 (1117-1175)||(34935540-34935598)
chr3 (1071-1112)||(12047276-12047317)
[»] chr5 (71 HSPs)
chr5 (1078-1176)||(17096444-17096545)
chr5 (1042-1176)||(17096438-17096582)
chr5 (1079-1176)||(9004986-9005086)
chr5 (1042-1165)||(30778012-30778145)
chr5 (1072-1178)||(11773455-11773564)
chr5 (1079-1176)||(29807117-29807215)
chr5 (1079-1176)||(30778039-30778139)
chr5 (1078-1164)||(15965969-15966058)
chr5 (1119-1176)||(7164844-7164901)
chr5 (1040-1176)||(9004948-9005094)
chr5 (1078-1178)||(15965994-15966097)
chr5 (1079-1171)||(29807084-29807177)
chr5 (1072-1162)||(10495225-10495319)
chr5 (1079-1170)||(14642023-14642117)
chr5 (1078-1177)||(15966643-15966745)
chr5 (1078-1173)||(22565633-22565732)
chr5 (1072-1164)||(27304769-27304864)
chr5 (1125-1176)||(20657262-20657313)
chr5 (1078-1164)||(21152601-21152690)
chr5 (1078-1164)||(21159736-21159825)
chr5 (1078-1164)||(21163543-21163632)
chr5 (1078-1145)||(38860832-38860902)
chr5 (1078-1175)||(3161264-3161364)
chr5 (1077-1174)||(7336892-7336992)
chr5 (1042-1178)||(14064805-14064951)
chr5 (1072-1169)||(37554379-37554479)
chr5 (1078-1176)||(43585496-43585597)
chr5 (1079-1176)||(14064811-14064911)
chr5 (1079-1176)||(14571009-14571109)
chr5 (1079-1164)||(14571047-14571134)
chr5 (1080-1176)||(35172431-35172530)
chr5 (1072-1169)||(37685002-37685102)
chr5 (1078-1145)||(18942018-18942088)
chr5 (1117-1176)||(20361978-20362037)
chr5 (1078-1171)||(22565601-22565698)
chr5 (1078-1145)||(34186387-34186457)
chr5 (1072-1171)||(35172462-35172564)
chr5 (1078-1164)||(21163568-21163657)
chr5 (1079-1145)||(36964262-36964331)
chr5 (1072-1145)||(6638296-6638372)
chr5 (1078-1178)||(15966681-15966784)
chr5 (1090-1175)||(24433585-24433673)
chr5 (1078-1175)||(43176253-43176353)
chr5 (1081-1145)||(2673888-2673955)
chr5 (1078-1174)||(14416409-14416508)
chr5 (1078-1178)||(26168187-26168290)
chr5 (1078-1174)||(36964268-36964367)
chr5 (1117-1173)||(39785141-39785197)
chr5 (1079-1162)||(42247566-42247653)
chr5 (1078-1174)||(43585533-43585632)
chr5 (1078-1176)||(13420472-13420573)
chr5 (1117-1164)||(14642096-14642143)
chr5 (1117-1176)||(16985326-16985385)
chr5 (1078-1145)||(18753649-18753719)
chr5 (1078-1145)||(24089074-24089144)
chr5 (1119-1178)||(36792717-36792776)
chr5 (1078-1172)||(1723281-1723378)
chr5 (1079-1145)||(11795768-11795837)
chr5 (1078-1175)||(12165285-12165386)
chr5 (1079-1145)||(14303062-14303128)
chr5 (1078-1164)||(18942024-18942113)
chr5 (1078-1164)||(21152626-21152715)
chr5 (1078-1164)||(21159761-21159850)
chr5 (1079-1145)||(25408582-25408651)
chr5 (1078-1176)||(34102113-34102214)
chr5 (1078-1176)||(35067957-35068058)
chr5 (1072-1174)||(36346792-36346903)
chr5 (1122-1175)||(12442850-12442903)
chr5 (1072-1113)||(34820657-34820698)
chr5 (1072-1145)||(36329112-36329188)
chr5 (1078-1174)||(43340453-43340552)
[»] chr6 (25 HSPs)
chr6 (1042-1176)||(2033170-2033314)
chr6 (1118-1178)||(18685198-18685258)
chr6 (1043-1176)||(5301913-5302060)
chr6 (1042-1176)||(2033164-2033308)
chr6 (1078-1145)||(21478585-21478655)
chr6 (1078-1175)||(3212243-3212343)
chr6 (1078-1164)||(9908174-9908263)
chr6 (1079-1176)||(27082381-27082474)
chr6 (1072-1174)||(7418878-7418983)
chr6 (1078-1164)||(32786129-32786218)
chr6 (1129-1176)||(5301918-5301965)
chr6 (1079-1176)||(14804204-14804302)
chr6 (1078-1176)||(667729-667830)
chr6 (1078-1174)||(3343815-3343914)
chr6 (1078-1176)||(5433369-5433470)
chr6 (1078-1145)||(8145987-8146057)
chr6 (1078-1164)||(10731511-10731600)
chr6 (1072-1135)||(31759366-31759432)
chr6 (1080-1145)||(3012400-3012468)
chr6 (1079-1145)||(6047995-6048064)
chr6 (1078-1164)||(11989159-11989244)
chr6 (1079-1145)||(14173422-14173491)
chr6 (1079-1145)||(14177958-14178027)
chr6 (1078-1183)||(7418913-7419021)
chr6 (1079-1175)||(15467612-15467711)
[»] scaffold0635 (2 HSPs)
scaffold0635 (1072-1176)||(5420-5527)
scaffold0635 (1079-1164)||(5401-5489)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1072-1145)||(58332-58408)
[»] scaffold0111 (3 HSPs)
scaffold0111 (1078-1176)||(38008-38109)
scaffold0111 (1117-1176)||(38397-38456)
scaffold0111 (1078-1164)||(38045-38134)
[»] scaffold0172 (2 HSPs)
scaffold0172 (1078-1145)||(11616-11686)
scaffold0172 (1078-1145)||(11622-11692)
[»] scaffold1266 (1 HSPs)
scaffold1266 (1079-1145)||(162-231)
[»] scaffold0121 (1 HSPs)
scaffold0121 (1072-1175)||(17466-17572)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1118-1162)||(108045-108089)
[»] scaffold1786 (1 HSPs)
scaffold1786 (1078-1176)||(511-612)
[»] scaffold0340 (1 HSPs)
scaffold0340 (1078-1145)||(14065-14135)
[»] scaffold0263 (1 HSPs)
scaffold0263 (1079-1145)||(19832-19901)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1079-1145)||(146007-146076)
[»] scaffold0236 (1 HSPs)
scaffold0236 (1079-1145)||(13734-13802)


Alignment Details
Target: chr1 (Bit Score: 566; Significance: 0; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 566; E-Value: 0
Query Start/End: Original strand, 802 - 1516
Target Start/End: Complemental strand, 49980266 - 49979544
Alignment:
Q  802 gtatttgaccccatagaggtttgtggtgttgaccaggacggatcggttgtgcata--gtttggttgattacgtggtacgtggtttccttgtgaccggtgg 899  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||    
T  49980266 gtatttgaccccacagaggtttgtggtgttgaccaggacggatcggttgtgcatatagtttggttgattacgtggtacgtggtttccttgtgac-ggtgg 49980168  T
Q  900 tacgtggtttccttgttggtggtatgattttcaggttctatgannnnnnnnaataaacaaactagcattaaaggatgta--aggctactccaaacccttc 997  Q
    |||||||||||||||||||||||||| ||||||||||||||||        ||||||||||||||||||||||||||||  ||||||||||||||||||     
T  49980167 tacgtggtttccttgttggtggtatgtttttcaggttctatgattttttttaataaacaaactagcattaaaggatgtacaaggctactccaaaccctta 49980068  T
Q  998 caaggaagaatgtcacatcttaagcattacattacaactaactaatactccctccgttttttaacataagtaaattttgagtt-------cattcaatca 1090  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||       ||||||||||    
T  49980067 caaggaagaatgtcacatgttaagcattacattacaactaactaatactccctccattttttaacataagcaaattttgacttttagattcattcaatca 49979968  T
Q  1091 atgatgtatgtggtctataatataaccatacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggaggaattacaactctgc 1190  Q
    ||||||||||||||||| || |  || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||     
T  49979967 atgatgtatgtggtctaaaagaccac-atacatcattgattgaatgaatctaaaagttaaaatttacttatattaaaaaacggaggaagtacaactctgt 49979869  T
Q  1191 gggaccatcttaatgtgatccattatctctaaataatgtcatcctacactatgctttgttgtggttctggttgttttaccattcccttacactttatctt 1290  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  49979868 gagaccatcttaatgtgatccattatctctaaataatgtcatcctacactatgctt-gttgtggttctggttgttttaccattcccttacactttatctt 49979770  T
Q  1291 ttatcgctttgttttatgatttgatgtactccttcttaaactctttgtactccttgggttttattacataacatagttacctttgggaggtgatctttgg 1390  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  49979769 ttatcgctttgttttatgatttgatgtactccttcttaaactctttgtactccttgggttttattatataacatagttacctttgggaggtgatctttgg 49979670  T
Q  1391 ctaggaagaaagggggtctgtgtttgtattatgtatggttttcgaactgataaggtttctagatatgcgttaagaagaaatttgattgatagtagaggca 1490  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49979669 ctaggaagaaagggggtctgtgtttgtattatgtatggttttcgaactgataaggtttctagatatgcgttaagaagaaatttgattgatagtagaggca 49979570  T
Q  1491 tgattgattgtttgaatattctatgt 1516  Q
    ||||||||||||||||||||||||||    
T  49979569 tgattgattgtttgaatattctatgt 49979544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 358; E-Value: 0
Query Start/End: Original strand, 18 - 484
Target Start/End: Complemental strand, 49981462 - 49980989
Alignment:
Q  18 actcacatcgtccaactaagttatgtgattttgggttggtgcatagtgacgtagacataatacgttgatatacaatacaacatatgatgtgtaaaatata 117  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  49981462 actcacatcgtccgactaagttatgtgattttgggttggtgcatagtgacgtagacgtaatacgttgatatacaatacaacatatgatgtgtaaaatata 49981363  T
Q  118 agcccagatagattgtgaattttataatccaaaaaacattaaaaacgcttcaaattatgattcaagtggggataaaatagacgaaaccgaggacgggcgc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  49981362 agcccagatagattgtgaattttataatccaaaaaacattaaaaatgcttcaaattatgattcaaatggggataaaatagacgaaaccgaggacgggcgc 49981263  T
Q  218 gagaaggtcgg-------gaaaagaaattctttatattcatcccaaaacaaattgaannnnnnncactttagtctcggcactatgttattgtttctaaga 310  Q
    |||||||  ||       ||||| |||||||||| ||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||||||    
T  49981262 gagaagggtggatggtgggaaaataaattctttacattcatccccaaacaaattgaattcttttcactttagtctcggcactatgttattgtttctaaga 49981163  T
Q  311 tgggtctagagtttatttttaattttgtaacctatatgaagcatgannnnnnnaggggatgtagcattattaattcttaagtattaaaagagtaaaatac 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||| ||||||||||||||||||||||||||||||    
T  49981162 tgggtctagagtttatttttaattttgtaacctatatgaagcatgaattttttaggggatgtagcattactaattcttaagtattaaaagagtaaaatac 49981063  T
Q  411 ataattgaaagtccgtaactgtggttcatgtgttaaacaaatgattgcacttcacattggcccattcaattgtg 484  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49981062 ataattgaaagtccttaactctggttcatgtgttaaacaaatgattgcacttcacattggcccattcaattgtg 49980989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 152; E-Value: 9e-80
Query Start/End: Original strand, 556 - 738
Target Start/End: Complemental strand, 49980917 - 49980737
Alignment:
Q  556 ttggaacatcatgaatcacataatttgaaacggaaggaaccaattgttggtctagagttgatatcaggagttttatttcttcgaaattactagtaattta 655  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49980917 ttggaacatcatgaatca--taatttgaaacggaaggaaccaattgttggtctagagttgatatcaggagttttatttcttcgaaattactagtaattta 49980820  T
Q  656 gttaaatttgattgtgtggtctatttgaaagtccctaaatggatctattttctttggaaagatagtaattgttgagcaactta 738  Q
    ||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||||||||||| |||||||||    
T  49980819 gttaaatttgattgtgtggtctatttgaaggttcccaaatggatctattttctttgaaaagatagtaattgttcagcaactta 49980737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 8e-34
Query Start/End: Original strand, 1043 - 1176
Target Start/End: Complemental strand, 38190992 - 38190849
Alignment:
Q  1043 tactccctccgttttttaacataagtaaattttga-------gttcattcaatcaatgatgtatgtggtctataatat-aaccata--catcattgattg 1132  Q
    |||||| |||||||||||| ||||| |||||||||       ||||||||||||||||||||||||||| |||||||| |||||||  ||||||||||||    
T  38190992 tactccatccgttttttaatataagcaaattttgaattttaggttcattcaatcaatgatgtatgtggtttataatattaaccatatacatcattgattg 38190893  T
Q  1133 aatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||    
T  38190892 aatgaatctgaaagtcaaaatttgcttatattaaaaaacggagg 38190849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 3e-27
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Original strand, 43384521 - 43384622
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||||||||||||| |   |||||| ||||||||||||||||||||||  ||||||| ||||||||||||||||||    
T  43384521 gttcattcaattaatgatgtatgtggtctataatataaaccacatacataattgattgaatgaatctaaaagataaaatttgcttatattaaaaaacgga 43384620  T
Q  1175 gg 1176  Q
    ||    
T  43384621 gg 43384622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 3e-27
Query Start/End: Original strand, 737 - 804
Target Start/End: Complemental strand, 49980614 - 49980547
Alignment:
Q  737 tatgtaaaaaataagtggaaatggttttcaggtaaggtaagacttcacggaaaacttgttattatgta 804  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  49980614 tatgtaaaaaataagtggaagtggttttcaggtaaggtaagacttcacggaaaacttgttattatgta 49980547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 3e-24
Query Start/End: Original strand, 1043 - 1176
Target Start/End: Original strand, 49979878 - 49980017
Alignment:
Q  1043 tactccctccgttttttaacataagtaaattttgagtt-------cattcaatcaatgatgtatgtggtctataatataaccatacatcattgattgaat 1135  Q
    |||| |||||||||||||| ||||||||||||| | ||       |||||||||||||||||||||||||| | | |  || ||||||||||||||||||    
T  49979878 tacttcctccgttttttaatataagtaaattttaacttttagattcattcaatcaatgatgtatgtggtcttttagaccac-atacatcattgattgaat 49979976  T
Q  1136 gaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||||||||||||||||||| ||||| |||||||| |||||    
T  49979977 gaatctaaaagtcaaaatttgcttatgttaaaaaatggagg 49980017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 1043 - 1174
Target Start/End: Original strand, 38190844 - 38190985
Alignment:
Q  1043 tactccctccgttttttaacataagtaaattttgagtt-------cattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattg 1132  Q
    ||||||||||||||||||| ||||| ||||||||| ||       ||||||||||||||||||| ||||  ||| ||||| |   |||||||||||||||    
T  38190844 tactccctccgttttttaatataagcaaattttgactttcagattcattcaatcaatgatgtatatggttaatattataaaccacatacatcattgattg 38190943  T
Q  1133 aatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    |||||| |||||| ||||||||| ||||||||||||||||||    
T  38190944 aatgaacctaaaattcaaaatttgcttatattaaaaaacgga 38190985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 7e-22
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Original strand, 40960777 - 40960878
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    |||||||||||||||||| ||| |||| |||| |||| | ||  ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  40960777 gttcattcaatcaatgatatatatggtttatattatagatcaaatacattattgattgaatgaatctaaaagtcaaaatttgcttatattaaaaaacgga 40960876  T
Q  1175 gg 1176  Q
    ||    
T  40960877 gg 40960878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 1072 - 1167
Target Start/End: Original strand, 13219449 - 13219549
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatata---acca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaa 1166  Q
    |||| |||||||||||||||||||||||||||| |||| ||||   ||||  ||||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  13219449 ttttaagttcattcaatcaatgatgtatgtggtttatattatatagaccacatacatcattgattgaataaatttaaaagtcaaaatttgcttatattaa 13219548  T
Q  1167 a 1167  Q
    |    
T  13219549 a 13219549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 1117 - 1176
Target Start/End: Complemental strand, 46580886 - 46580827
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  46580886 catacatcattgattgaatgaacctaaaagtaaaaatttacttatattaaaaaacggagg 46580827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1082 - 1176
Target Start/End: Complemental strand, 13219517 - 13219418
Alignment:
Q  1082 attcaatcaatgatgtatgtggtctata--atataacc---atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||||||||||||||||||||||||  |||||| |   |||||||||||||||||||||  ||||||| ||||||| ||||||||||||||| ||||    
T  13219517 attcaatcaatgatgtatgtggtctatataatataaaccacatacatcattgattgaatgaacttaaaagttaaaatttgcttatattaaaaaacagagg 13219418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1118 - 1176
Target Start/End: Original strand, 12030312 - 12030370
Alignment:
Q  1118 atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||    
T  12030312 atacatcattgattgaatgaacctaaaagtcaaaatttgtttatattaaaaaacggagg 12030370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Complemental strand, 37255228 - 37255127
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||  |||||||  ||  ||||||||||| |||||||||||||||||   ||||||| ||||||||||||||||||    
T  37255228 gttcattcaattaatgatgtatgtggttaataatatggaccacatacatcattaattgaatgaatctaaaaagtaaaatttgcttatattaaaaaacgga 37255129  T
Q  1175 gg 1176  Q
    ||    
T  37255128 gg 37255127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Complemental strand, 45239093 - 45239004
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||||||||||||||||| ||| |||||  ||||||||||||| |||||||||||||   ||||||||||||||||    
T  45239093 gttcattcaattaatgatgtatgtggtctatattatgaaccacatacatcattgattaaatgaatctaaaaagtaaaatttacttatatt 45239004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1043 - 1162
Target Start/End: Complemental strand, 40960883 - 40960754
Alignment:
Q  1043 tactccctccgttttttaacataagtaaattttgagtt-------cattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattg 1132  Q
    ||||||||||||||||||| ||||| ||||||||| ||       |||||||||||| |||||| || |||||||||||| |   ||| |||||||||||    
T  40960883 tactccctccgttttttaatataagcaaattttgacttttagattcattcaatcaataatgtatttgatctataatataaaccatatatatcattgattg 40960784  T
Q  1133 aatgaatctaaaagtcaaaatttacttata 1162  Q
    |||||| |||||||| ||||||| ||||||    
T  40960783 aatgaacctaaaagttaaaatttgcttata 40960754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1078 - 1178
Target Start/End: Complemental strand, 8751534 - 8751431
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| ||||||||||||||| ||||| |||| |   |||||||||| |||||||||| ||||||   ||||||| ||||||||  ||||||||    
T  8751534 gttcattcaattaatgatgtatgtggtttataacataaaccacatacatcattaattgaatgaacctaaaaaataaaatttgcttatattttaaaacgga 8751435  T
Q  1175 ggaa 1178  Q
    ||||    
T  8751434 ggaa 8751431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1117 - 1178
Target Start/End: Complemental strand, 35049992 - 35049931
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggaggaa 1178  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| |  ||||||||||||    
T  35049992 catacatcattaattgaatgaacctaaaagtcaaaatttacttataattgaaaacggaggaa 35049931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1072 - 1176
Target Start/End: Complemental strand, 43020440 - 43020333
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaa 1168  Q
    |||| |||||||||||| || |||||||||||| ||||||||| ||||  ||||||||  ||| |||||| |||||| ||||||||| |||||| | |||    
T  43020440 ttttaagttcattcaattaacgatgtatgtggtatataatatagaccacttacatcataaatttaatgaacctaaaaatcaaaatttgcttataattaaa 43020341  T
Q  1169 aacggagg 1176  Q
    ||||||||    
T  43020340 aacggagg 43020333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Complemental strand, 4683039 - 4682969
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| |||||||||||||||||||||||| |||  ||||||||||| ||||||| |||||||||    
T  4683039 gttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaataaatctaaaa 4682969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Original strand, 31909787 - 31909876
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||||||||||||||||| |||||    ||||||||||| |||||||||| ||||||   ||||||| ||||||||    
T  31909787 gttcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattgaatgaacctaaaaaataaaatttgcttatatt 31909876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1079 - 1174
Target Start/End: Complemental strand, 38824392 - 38824294
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    |||||||||| |||||||||||||||||||| ||| |||  ||||||||||| ||||||||||  |||||   ||||||| |||||||| |||||||||    
T  38824392 ttcattcaattaatgatgtatgtggtctatattatgaaccacatacatcattaattgaatgaacataaaaaataaaatttgcttatatttaaaaacgga 38824294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1082 - 1176
Target Start/End: Original strand, 21909883 - 21909980
Alignment:
Q  1082 attcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||| |||||||||||||||| ||| ||| |||  ||||||||||| ||||||| |||||||||   ||||||| |||||||| |||||||||||    
T  21909883 attcaattaatgatgtatgtggtccatattatgaactacatacatcattaattgaataaatctaaaaagtaaaatttgcttatatttaaaaacggagg 21909980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Complemental strand, 31909851 - 31909762
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| ||||||||||||||| ||||||||| ||  ||||||||||| |||||||||| ||||||   ||||||| ||||||||    
T  31909851 gttcattcaattaatgatgtatgtggtttataatatagaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatt 31909762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Original strand, 38824329 - 38824430
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||  |||||||| ||||  ||||||||| |||||||||||||||||   |||||||  ||||||| | |||||||    
T  38824329 gttcattcaattaatgatgtatgtggttcataatatagaccacatacatcattaattgaatgaatctaaaacgtaaaatttgtttatatttagaaacgga 38824428  T
Q  1175 gg 1176  Q
    ||    
T  38824429 gg 38824430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1078 - 1115
Target Start/End: Original strand, 48636756 - 48636793
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataa 1115  Q
    ||||||||||||||||||||||||||||||||||||||    
T  48636756 gttcattcaatcaatgatgtatgtggtctataatataa 48636793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1078 - 1171
Target Start/End: Complemental strand, 50144241 - 50144145
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-accatacatc--attgattgaatgaatctaaaagtcaaaatttacttatattaaaaaac 1171  Q
    ||||||| ||| ||| || |||||||| ||||||||| |||||| ||   ||| |||||||||| |||||||||||||||| |||||||||||||||    
T  50144241 gttcatttaattaataatatatgtggtttataatatagaccatatatattattaattgaatgaaactaaaagtcaaaatttgcttatattaaaaaac 50144145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1079 - 1176
Target Start/End: Original strand, 52253577 - 52253677
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    |||||||||| ||||||||||||| | ||||||||  ||  ||| ||||||| ||||||||||| |||||   |||||||||||||||| ||||||||||    
T  52253577 ttcattcaattaatgatgtatgtgatttataatatggactacatgcatcattaattgaatgaatttaaaaaataaaatttacttatatttaaaaacggag 52253676  T
Q  1176 g 1176  Q
    |    
T  52253677 g 52253677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1072 - 1164
Target Start/End: Original strand, 27549077 - 27549172
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    |||| |||||||||||| |||||||||||||||| ||| ||| |||  ||||||||||| |||||||||| ||||||   ||||||| ||||||||    
T  27549077 ttttaagttcattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatt 27549172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Original strand, 42140370 - 42140438
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataac-catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| |||||||||| |||||||||||||| | ||||||||||| ||||||| || ||||||    
T  42140370 gttcattcaattaatgatgtatatggtctataatataccacatacatcattaattgaataaacctaaaa 42140438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1042 - 1170
Target Start/End: Complemental strand, 43384628 - 43384491
Alignment:
Q  1042 atactccctccgttttttaacataagtaaattttg------ag-ttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgatt 1131  Q
    |||||||||||||||||||| ||||| |||||||       || |||||||||||||| ||||||||||| |||| |||| ||  ||||||||||| |||    
T  43384628 atactccctccgttttttaatataagcaaattttatcttttagattcattcaatcaattatgtatgtggtttatattatagaccacatacatcattaatt 43384529  T
Q  1132 gaatgaatctaaaagtcaaaatttacttatattaaaaaa 1170  Q
    ||||||| ||  ||||||||||||  |||||||||||||    
T  43384528 gaatgaacct-gaagtcaaaatttgtttatattaaaaaa 43384491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Complemental strand, 4838411 - 4838312
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataac-catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||||||| ||||||||||||||| ||||||| | |  |||||||||| |||||||||| ||||||   |||||||  ||||||| | |||||||||    
T  4838411 gttcattcaattaatgatgtatgtggtttataatagaccaaatacatcattaattgaatgaacctaaaaagtaaaatttgtttatatttagaaacggagg 4838312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Original strand, 29070655 - 29070725
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| ||||||||||||||||||||||||  ||  ||||||||||| |||||||||| ||||||    
T  29070655 gttcattcaataaatgatgtatgtggtctataatatggaccacatacatcatttattgaatgaacctaaaa 29070725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Original strand, 34037958 - 34038028
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| || ||||||||||||||||||||| |||  ||||||||||| |||||||||| ||||||    
T  34037958 gttcattcaattaacgatgtatgtggtctataatatgaaccacatacatcattaattgaatgaacctaaaa 34038028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Original strand, 47011282 - 47011383
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataac---catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||| ||||||||| ||| |||||    ||||||||||| |||||||||| ||||||   ||||||| |||||||| ||||| |||    
T  47011282 gttcattcaattaatgatatatgtggtccatattataaatcacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttaaaaatgga 47011381  T
Q  1175 gg 1176  Q
    ||    
T  47011382 gg 47011383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1072 - 1174
Target Start/End: Complemental strand, 24478773 - 24478668
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaa 1168  Q
    |||| |||||||| ||| ||||||||||||||| ||||||||| ||  |||| |||||| |||||||||| || |||   |||||||||||||||| | |    
T  24478773 ttttaagttcatttaattaatgatgtatgtggtttataatatagaccacatatatcattaattgaatgaacctcaaaaataaaatttacttatatttaga 24478674  T
Q  1169 aacgga 1174  Q
    ||||||    
T  24478673 aacgga 24478668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1078 - 1175
Target Start/End: Original strand, 24478703 - 24478803
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||| ||||||||||||| |||||    ||||||||||| ||| ||||||  |||||   ||||||| |||||||| |||||||||    
T  24478703 gttcattcaattaatgatatatgtggtctatattataaaccacatacatcattaattaaatgaacttaaaaagtaaaatttgcttatatttaaaaacgga 24478802  T
Q  1175 g 1175  Q
    |    
T  24478803 g 24478803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Complemental strand, 25378359 - 25378270
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||||||||||||| ||| ||| |||||  ||||||||| |||||||||| ||||||   ||||||| ||||||||    
T  25378359 gttcattcaattaatgatgtatgtggtcaatattatgaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatt 25378270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Original strand, 25378295 - 25378396
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataata-taac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||  |||||| | ||  ||||||||||| |||||||||| ||||||   ||||||| ||||||||  ||||||||    
T  25378295 gttcattcaattaatgatgtatgtggttcataatattgaccacatacatcattaattgaatgaacctaaaaaataaaatttgcttatattttaaaacgga 25378394  T
Q  1175 gg 1176  Q
    ||    
T  25378395 gg 25378396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1079 - 1145
Target Start/End: Original strand, 34953935 - 34954004
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-acc--atacatcattgattgaatgaatctaaaa 1145  Q
    |||||||| | ||||||||||||||||||||||| | |||  |||||||||| |||||||||||||||||    
T  34953935 ttcattcattaaatgatgtatgtggtctataataaagaccatatacatcattaattgaatgaatctaaaa 34954004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1042 - 1176
Target Start/End: Original strand, 37255121 - 37255265
Alignment:
Q  1042 atactccctccgttttttaacataagtaaattttg------ag-ttcattcaatcaatgatgtatgtggtctataatat-aacca--tacatcattgatt 1131  Q
    |||||||||||||||||||| ||||| |||||||       || |||||||||| |||||||||||||||| ||| ||| |||||  ||||||||| |||    
T  37255121 atactccctccgttttttaatataagcaaattttactttttagattcattcaattaatgatgtatgtggtccatattattaaccacatacatcattaatt 37255220  T
Q  1132 gaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||| ||||||   || |||| |||||||| | |||||||||    
T  37255221 gaatgaacctaaaaagtaatatttgcttatatttagaaacggagg 37255265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1042 - 1103
Target Start/End: Original strand, 46580821 - 46580889
Alignment:
Q  1042 atactccctccgttttttaacataagtaaattttga-------gttcattcaatcaatgatgtatgtgg 1103  Q
    |||||||||||||||||||| ||||||||||||| |       ||||||||||||||||||||||||||    
T  46580821 atactccctccgttttttaatataagtaaatttttacttttaggttcattcaatcaatgatgtatgtgg 46580889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1072 - 1175
Target Start/End: Original strand, 38847334 - 38847440
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatct-aaaagtcaaaatttacttatattaaa 1167  Q
    |||| |||||||||| | |||||||||||||||||||| |||||    ||||||||||| | |||||||| || ||||||| || ||| |||||||| ||    
T  38847334 ttttaagttcattcatttaatgatgtatgtggtctatattataaaccacatacatcattaaatgaatgaacctaaaaagtc-aattttgcttatatttaa 38847432  T
Q  1168 aaacggag 1175  Q
    ||||||||    
T  38847433 aaacggag 38847440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Original strand, 4838349 - 4838448
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataac-catacatcattgattgaatgaatctaa-aagtcaaaatttacttatattaaaaaacggag 1175  Q
    ||||||||||| |||||||||| |||||||| ||| | | ||||||||||| |||||||||| |||| |||| |||||||  ||||||| | ||||||||    
T  4838349 gttcattcaattaatgatgtatttggtctattataaaccacatacatcattaattgaatgaacctaagaagt-aaaatttgtttatatttagaaacggag 4838447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1078 - 1178
Target Start/End: Original strand, 5852726 - 5852829
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| ||||||||||||||| ||||||||  ||  |||||||||||  ||||||| | ||||||   ||||||| ||||||||  ||||||||    
T  5852726 gttcattcaattaatgatgtatgtggtttataatatggaccacatacatcattagttgaatgtacctaaaaagtaaaatttgcttatatttcaaaacgga 5852825  T
Q  1175 ggaa 1178  Q
    ||||    
T  5852826 ggaa 5852829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1078 - 1178
Target Start/End: Complemental strand, 6763436 - 6763333
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aacc--atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| ||||||||||||||| ||||||||  |||  ||||||||||  ||||||| | ||||||   ||||||| ||||||||  ||||||||    
T  6763436 gttcattcaattaatgatgtatgtggtttataatatggaccaaatacatcattagttgaatgtacctaaaaagtaaaatttgcttatattttaaaacgga 6763337  T
Q  1175 ggaa 1178  Q
    ||||    
T  6763336 ggaa 6763333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Complemental strand, 28237174 - 28237104
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataac---catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| |||||||||||||||| ||||||| ||   ||||||||||| ||  |||||||||||||    
T  28237174 gttcattcaattaatgatgtatgtggtccataatatgacccacatacatcattaataaaatgaatctaaaa 28237104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1078 - 1178
Target Start/End: Complemental strand, 46518047 - 46517944
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| ||||||||||||||| ||||||||  ||  |||||||||||  ||||||| | ||||||   ||||||| ||||||||  ||||||||    
T  46518047 gttcattcaattaatgatgtatgtggtttataatatggaccacatacatcattagttgaatgtacctaaaaagtaaaatttgcttatatttcaaaacgga 46517948  T
Q  1175 ggaa 1178  Q
    ||||    
T  46517947 ggaa 46517944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Original strand, 48605108 - 48605178
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| |||||||||||||||| ||||||| |    ||||||||||| |||||||||| ||||||    
T  48605108 gttcattcaattaatgatgtatgtggtccataatatgaatcacatacatcattaattgaatgaacctaaaa 48605178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Complemental strand, 1252233 - 1252163
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| ||||||||| |||||| ||||||| |||  ||||||||||| |||||||||| ||||||    
T  1252233 gttcattcaattaatgatgtacgtggtccataatatgaaccacatacatcattaattgaatgaacctaaaa 1252163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1090 - 1176
Target Start/End: Original strand, 4974095 - 4974184
Alignment:
Q  1090 aatgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatct-aaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||||||||||||||| ||| ||| |||||  ||||||||| | ||||||||||| ||||||| || ||| ||||||||||||||||||||    
T  4974095 aatgatgtatgtggtccatattatgaaccacatacatcattaaatgaatgaatctaaaaagtc-aattttgcttatattaaaaaacggagg 4974184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Original strand, 8751470 - 8751559
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| ||||||||||||||| |||  ||||| |   |||||||||| |||||||||| ||||||   ||||||| ||||||||    
T  8751470 gttcattcaattaatgatgtatgtggtttatgttataaaccacatacatcattaattgaatgaacctaaaaaataaaatttgcttatatt 8751559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1082 - 1145
Target Start/End: Complemental strand, 12993622 - 12993556
Alignment:
Q  1082 attcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||| |||||||||||||||| ||||||| |||  ||||||||||| |||||||||| ||||||    
T  12993622 attcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaatgaacctaaaa 12993556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Original strand, 34061981 - 34062051
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| |||||||||||||||| | ||||| |||  ||||||||||| |||||||||| ||||||    
T  34061981 gttcattcaattaatgatgtatgtggtcaacaatatgaaccacatacatcattaattgaatgaacctaaaa 34062051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Original strand, 39015601 - 39015671
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| |||||||||||||||| ||| ||| |||  ||||||||||| |||||||||| ||||||    
T  39015601 gttcattcaattaatgatgtatgtggtcaatattatgaaccacatacatcattaattgaatgaacctaaaa 39015671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1117 - 1176
Target Start/End: Original strand, 40328952 - 40329011
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||||||| |||||||||||||||||   |||||||  ||||||| |||||||||||    
T  40328952 catacatcattaattgaatgaatctaaaaagtaaaatttgtttatatttaaaaacggagg 40329011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1043 - 1176
Target Start/End: Complemental strand, 52253682 - 52253539
Alignment:
Q  1043 tactccctccgttttttaacataagtaaattttg-------agttcattcaatcaatgatgtatgtggtctataatataac---catacatcattgattg 1132  Q
    |||||||||||||||| || |||||||||||||        | |||||||||| ||||||| |||| ||| ||| |||||    ||||||||||| ||||    
T  52253682 tactccctccgtttttaaatataagtaaattttattttttaaattcattcaattaatgatgcatgtagtccatattataaatcacatacatcattaattg 52253583  T
Q  1133 aatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||| |||||   ||||||| |||||||| | |||||||||    
T  52253582 aatgaatataaaaagtaaaatttgcttatatttagaaacggagg 52253539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Original strand, 52923361 - 52923431
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctat--aatataac-catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| |||||||||||||||| ||  |||||| | ||||||||||| |||||||||| ||||||    
T  52923361 gttcattcaataaatgatgtatgtggtccattaaatatatcacatacatcatttattgaatgaacctaaaa 52923431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1079 - 1145
Target Start/End: Original strand, 15351754 - 15351823
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaa 1145  Q
    |||||||||| |||||||||||| ||||| |||| | ||  ||||||||||| |||||||||||||||||    
T  15351754 ttcattcaataaatgatgtatgttgtctacaataaagaccacatacatcatttattgaatgaatctaaaa 15351823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Original strand, 27552268 - 27552357
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat--aac-catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| ||||| |||||||||| ||| |||  ||| ||||||||||| |||||||||| ||||||   ||||||| ||||||||    
T  27552268 gttcattcaattaatgacgtatgtggtccatattatgaaactcatacatcattaattgaatgaacctaaaaactaaaatttgcttatatt 27552357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Original strand, 43020370 - 43020471
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||| |||  |||||||| |||||||||| |||| ||||  |||||| || ||||||||||  ||||||| |||||||||||||| | ||||| |||    
T  43020370 gttcattaaatttatgatgtaagtggtctatattatataccacatacatcgttaattgaatgaacttaaaagttaaaatttacttataattaaaaaagga 43020469  T
Q  1175 gg 1176  Q
    ||    
T  43020470 gg 43020471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1079 - 1176
Target Start/End: Original strand, 50144178 - 50144278
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    |||||||||| ||| || ||| ||||||||| ||||| |   ||| || ||| ||| |||||| |||||||| ||||||| |||||||||||||| ||||    
T  50144178 ttcattcaattaataatatatatggtctatattataaaccacatatattattaattaaatgaacctaaaagttaaaatttgcttatattaaaaaatggag 50144277  T
Q  1176 g 1176  Q
    |    
T  50144278 g 50144278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1072 - 1114
Target Start/End: Complemental strand, 51796751 - 51796709
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatata 1114  Q
    |||| ||||||||||||| || |||||||||||||||||||||    
T  51796751 ttttaagttcattcaatccataatgtatgtggtctataatata 51796709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1118 - 1178
Target Start/End: Complemental strand, 2091805 - 2091745
Alignment:
Q  1118 atacatcattgattgaatgaatctaaaa-gtcaaaatttacttatattaaaaaacggaggaa 1178  Q
    |||||||||| |||||||||| |||||| |||||| ||||||||||||  ||||||||||||    
T  2091805 atacatcattaattgaatgaacctaaaaagtcaaa-tttacttatattttaaaacggaggaa 2091745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1072 - 1113
Target Start/End: Complemental strand, 7230167 - 7230126
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatat 1113  Q
    |||| |||||||||||| |||||||||||||||| |||||||    
T  7230167 ttttaagttcattcaattaatgatgtatgtggtccataatat 7230126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1078 - 1178
Target Start/End: Complemental strand, 12062296 - 12062193
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatct-aaaagtcaaaatttacttatattaaaaaacgg 1173  Q
    ||||||| ||| |||||||||||||||| ||| ||| |||  |||| |||||| |||||||||| || ||||||| || ||| |||||||| ||||||||    
T  12062296 gttcattgaattaatgatgtatgtggtccatattatgaaccacatatatcattaattgaatgaacctaaaaagtc-aattttccttatatttaaaaacgg 12062198  T
Q  1174 aggaa 1178  Q
    |||||    
T  12062197 aggaa 12062193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1117 - 1174
Target Start/End: Complemental strand, 21909901 - 21909844
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| ||||||| || ||||||   |||||||||||||||| |||||||||    
T  21909901 catacatcattaattgaataaacctaaaaagtaaaatttacttatattcaaaaacgga 21909844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1078 - 1183
Target Start/End: Complemental strand, 31327669 - 31327561
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aacc--atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||| | |||||||||||||||||||| ||| ||||  |||||||||| | |||||||| ||||||    || ||| ||||||||  ||||||||    
T  31327669 gttcattcatttaatgatgtatgtggtctatattatgaaccatatacatcattaaatgaatgaacctaaaaactgaattttgcttatattttaaaacgga 31327570  T
Q  1175 ggaattaca 1183  Q
    |||| ||||    
T  31327569 ggaagtaca 31327561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1071 - 1112
Target Start/End: Complemental strand, 41161574 - 41161533
Alignment:
Q  1071 attttgagttcattcaatcaatgatgtatgtggtctataata 1112  Q
    ||||| |||||||||| | |||||||||||||||||||||||    
T  41161574 attttaagttcattcatttaatgatgtatgtggtctataata 41161533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1072 - 1145
Target Start/End: Complemental strand, 42761341 - 42761265
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    |||| |||||||||| | |||||||||||||||||||| ||| |||  ||||||||||| | |||||||| ||||||    
T  42761341 ttttaagttcattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaaatgaatgaacctaaaa 42761265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0756 (Bit Score: 89; Significance: 3e-42; HSPs: 2)
Name: scaffold0756
Description:

Target: scaffold0756; HSP #1
Raw Score: 89; E-Value: 3e-42
Query Start/End: Original strand, 1042 - 1176
Target Start/End: Complemental strand, 3663 - 3519
Alignment:
Q  1042 atactccctccgttttttaacataagtaaattttga-------gttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgatt 1131  Q
    |||||||||||||||||||| ||||| |||||||||       |||||||||||||||||||||||||||||||||||||| |   ||||||||||||||    
T  3663 atactccctccgttttttaatataagcaaattttgacttttaggttcattcaatcaatgatgtatgtggtctataatataaaccacatacatcattgatt 3564  T
Q  1132 gaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  3563 gaatgaatctaaaagtcaaaatttgcttatattaaaaaacggagg 3519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0756; HSP #2
Raw Score: 72; E-Value: 5e-32
Query Start/End: Original strand, 1042 - 1176
Target Start/End: Original strand, 3513 - 3657
Alignment:
Q  1042 atactccctccgttttttaacataagtaaattttgagtt-------cattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgatt 1131  Q
    |||||||||||||||||||| ||||| ||||||||| ||       |||||||||||||||||||||||| |||| |||| ||||  |||||||||||||    
T  3513 atactccctccgttttttaatataagcaaattttgacttttagattcattcaatcaatgatgtatgtggtttatattatagaccacatacatcattgatt 3612  T
Q  1132 gaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||    
T  3613 gaatgaacctaaaagtcaaaatttgcttatattaaaaaacggagg 3657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542 (Bit Score: 86; Significance: 2e-40; HSPs: 2)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 86; E-Value: 2e-40
Query Start/End: Original strand, 1041 - 1176
Target Start/End: Original strand, 3408 - 3553
Alignment:
Q  1041 aatactccctccgttttttaacataagtaaattttga-------gttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgat 1130  Q
    ||||||||||||||||||||| ||||| |||||||||       |||||||||||||||||||||||||||||||||||||| |   |||||||||||||    
T  3408 aatactccctccgttttttaatataagcaaattttgacttttaggttcattcaatcaatgatgtatgtggtctataatataaaccacatacatcattgat 3507  T
Q  1131 tgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||    
T  3508 tgaatgaatctaaaagtcaaaatttgcttatattaaaaaacagagg 3553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542; HSP #2
Raw Score: 67; E-Value: 5e-29
Query Start/End: Original strand, 1043 - 1176
Target Start/End: Complemental strand, 3558 - 3415
Alignment:
Q  1043 tactccctccgttttttaacataagtaaattttgagtt-------cattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattg 1132  Q
    ||||||||| ||||||||| ||||| ||||||||| ||       |||||||||||||||||||||||| |||| |||| ||||  ||||||||||||||    
T  3558 tactccctctgttttttaatataagcaaattttgacttttagattcattcaatcaatgatgtatgtggtttatattatagaccacatacatcattgattg 3459  T
Q  1133 aatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  3458 aatgaacctaaaagtcaaaatttgcttatattaaaaaacggagg 3415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 8e-37; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 8e-37
Query Start/End: Original strand, 1043 - 1176
Target Start/End: Complemental strand, 19293160 - 19293017
Alignment:
Q  1043 tactccctccgttttttaacataagtaaattttgag-------ttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattg 1132  Q
    ||||||||||||||||||| ||||| |||||||||        ||||||||||||||||||||||||||||||||||||| |   |||||||||||||||    
T  19293160 tactccctccgttttttaatataagcaaattttgacatttagattcattcaatcaatgatgtatgtggtctataatataaaccacatacatcattgattg 19293061  T
Q  1133 aatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  19293060 aatgaacctaaaagtcaaaatttgcttatattaaaaaacggagg 19293017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 8e-34
Query Start/End: Original strand, 1043 - 1176
Target Start/End: Original strand, 19293012 - 19293155
Alignment:
Q  1043 tactccctccgttttttaacataagtaaattttga-------gttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattg 1132  Q
    ||||||||||||||||||| ||||| |||||||||       ||||||||||||||||||||||||||| |||| |||| ||||  ||||||||||||||    
T  19293012 tactccctccgttttttaatataagcaaattttgacttttaggttcattcaatcaatgatgtatgtggtttatattatagaccacatacatcattgattg 19293111  T
Q  1133 aatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||||||||||| |||||||||| ||||||||||||||||||||    
T  19293112 aatgaatctaaatgtcaaaatttgcttatattaaaaaacggagg 19293155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 1e-32
Query Start/End: Original strand, 1041 - 1176
Target Start/End: Original strand, 14052952 - 14053097
Alignment:
Q  1041 aatactccctccgttttttaacataagtaaattttga-------gttcattcaatcaatgatgtatgtggtctataatat-aacca--tacatcattgat 1130  Q
    ||||||||||| ||||||||| ||||| |||||||||       ||||||||||||||||||||||||| |||||||||| |||||  |||||||| |||    
T  14052952 aatactccctctgttttttaatataagcaaattttgatttttaggttcattcaatcaatgatgtatgtgctctataatatgaaccacatacatcatcgat 14053051  T
Q  1131 tgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||||||||||||||||||||||||  |||||||||||||||||||    
T  14053052 tgaatgaatctaaaagtcaaaatttgtttatattaaaaaacggagg 14053097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 3e-27
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Complemental strand, 33934179 - 33934080
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataac-catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||||||||||||||||||||||| ||| ||| | | |||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||    
T  33934179 gttcattcaatcaatgatgtatgtggtttattatagaccacatacatcattgattgaatgaacctaaaaatcaaaatttgcttatattaaaaaacggagg 33934080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 1042 - 1170
Target Start/End: Original strand, 33934074 - 33934210
Alignment:
Q  1042 atactccctccgttttttaacataagtaaattttga-------gttcattcaatcaatgatgtatgtggtctataatataac-catacatcattgattga 1133  Q
    |||||||||||||||||||| ||||| |||||||||       ||||||||||||||||||||||||||||||||||| | | |||||||||||||||||    
T  33934074 atactccctccgttttttaatataagcaaattttgatttttaggttcattcaatcaatgatgtatgtggtctataataaaccacatacatcattgattga 33934173  T
Q  1134 atgaatctaaaagtcaaaatttacttatattaaaaaa 1170  Q
    ||||| |||||| ||||| |||  |||| ||||||||    
T  33934174 atgaacctaaaaatcaaattttgtttatcttaaaaaa 33934210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 1041 - 1176
Target Start/End: Complemental strand, 14053104 - 14052959
Alignment:
Q  1041 aatactccctccgttttttaacataagtaaattttgagtt-------cattcaatcaatgatgtatgtggtctataatataac---catacatcattgat 1130  Q
    ||||||||||||||||||||| ||||  ||||||||| ||       ||||||||| ||||||||||||||  ||| ||||     ||||||||||||||    
T  14053104 aatactccctccgttttttaatataaacaaattttgacttttagattcattcaatcgatgatgtatgtggttcatattatagagcacatacatcattgat 14053005  T
Q  1131 tgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||||||| |||||| ||||||||| ||||||||||||||| ||||    
T  14053004 tgaatgaacctaaaaatcaaaatttgcttatattaaaaaacagagg 14052959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Complemental strand, 42631881 - 42631780
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||| ||| ||||| |   |||||||||| |||||||||||||||||   ||||||| |||||||| | |||||||    
T  42631881 gttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaatgaatctaaaaagtaaaatttgcttatatttagaaacgga 42631782  T
Q  1175 gg 1176  Q
    ||    
T  42631781 gg 42631780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1078 - 1172
Target Start/End: Complemental strand, 5419617 - 5419520
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacg 1172  Q
    |||||||||||||||||||||||||||  |||||||  ||  |||||||||||||||||||||| ||||||   ||||||| |||||||| |||||||    
T  5419617 gttcattcaatcaatgatgtatgtggttcataatatggactacatacatcattgattgaatgaacctaaaaaataaaatttgcttatatttaaaaacg 5419520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Complemental strand, 43484034 - 43483933
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||| ||||||| |||  ||||||||||| |||||||||||||||||    |||||| |||||||| || ||||||    
T  43484034 gttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaatgaatctaaaaagtgaaatttgcttatatttaagaacgga 43483935  T
Q  1175 gg 1176  Q
    ||    
T  43483934 gg 43483933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1079 - 1178
Target Start/End: Original strand, 13832047 - 13832149
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaa-aagtcaaaatttacttatattaaaaaacgga 1174  Q
    |||||||||| |||||||||||||||| ||||||| |||  |||| |||||| ||||||||||| ||| ||||| ||||||| ||||||| |||||||||    
T  13832047 ttcattcaattaatgatgtatgtggtccataatatgaaccacatatatcattaattgaatgaatttaagaagtc-aaatttatttatatttaaaaacgga 13832145  T
Q  1175 ggaa 1178  Q
    ||||    
T  13832146 ggaa 13832149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Complemental strand, 3611871 - 3611801
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| |||||||||||||||||||||||| |||  ||||||||||| |||||||||| ||||||    
T  3611871 gttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaatgaacctaaaa 3611801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Original strand, 8568858 - 8568928
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| |||||||||||||||||||||||| |||  ||||||||||| |||||||||| ||||||    
T  8568858 gttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaatgaacctaaaa 8568928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Original strand, 37922850 - 37922939
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||||||||||||| ||||||| |||  ||||||||||| |||||||||| ||||||   ||||||| ||||||||    
T  37922850 gttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatt 37922939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1079 - 1145
Target Start/End: Complemental strand, 43295989 - 43295920
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    |||||||||| ||||||||||||||||||||||||  ||  ||||||||||| |||||||||||||||||    
T  43295989 ttcattcaataaatgatgtatgtggtctataatatggaccacatacatcattcattgaatgaatctaaaa 43295920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1072 - 1145
Target Start/End: Original strand, 24418913 - 24418988
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaa 1145  Q
    |||| |||||||||||| ||||||||||||||||||| ||||| ||  ||||||||||| |||||||||||||||||    
T  24418913 ttttaagttcattcaataaatgatgtatgtggtctat-atatagacgacatacatcatttattgaatgaatctaaaa 24418988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1072 - 1145
Target Start/End: Original strand, 40802235 - 40802311
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    |||| |||||||||||| |||||||||||||||| ||||||| |||  ||||||||||| |||||||||| ||||||    
T  40802235 ttttaagttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaatgaacctaaaa 40802311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1079 - 1176
Target Start/End: Original strand, 42631818 - 42631916
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    |||||||||| ||||||||||||||| ||||||||  ||  ||||||||||| |||||||||| || ||||| ||||||| |||||||| ||||||||||    
T  42631818 ttcattcaattaatgatgtatgtggtttataatatggaccacatacatcattaattgaatgaacct-aaagt-aaaatttgcttatatttaaaaacggag 42631915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1078 - 1174
Target Start/End: Original strand, 5419553 - 5419652
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    |||||||||||||||||||||||| ||| ||| ||| |||||  |||||||||||||||||||| ||||||   |||||||  ||||||| | |||||||    
T  5419553 gttcattcaatcaatgatgtatgtagtccatattatgaaccacatacatcattgattgaatgaacctaaaaaataaaatttgtttatatttagaaacgga 5419652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Original strand, 41177996 - 41178066
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| |||||||||||||||| |||||||||    ||| ||||||| |||||||||||||||||    
T  41177996 gttcattcaattaatgatgtatgtggtccataatataaaccacatgcatcattaattgaatgaatctaaaa 41178066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Original strand, 35063498 - 35063568
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| |||||||||||||||||||||||| |||  ||||||||||| ||| |||||| ||||||    
T  35063498 gttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattaaatgaacctaaaa 35063568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Original strand, 35969700 - 35969789
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||||||| |||| ||||||||||    ||||||| ||| |||||||||| ||||||   ||||||||||||||||    
T  35969700 gttcattcaattaatgatgtatatggtttataatataaactacatacattattaattgaatgaacctaaaaagtaaaatttacttatatt 35969789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1117 - 1176
Target Start/End: Complemental strand, 40962120 - 40962061
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||| ||| |||||||||| ||||||||||||||||  ||||||| |||||||||||    
T  40962120 catacattattaattgaatgaacctaaaagtcaaaatttgtttatatttaaaaacggagg 40962061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1090 - 1176
Target Start/End: Complemental strand, 40716836 - 40716747
Alignment:
Q  1090 aatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||||||||||| ||||||||  ||  ||||||||||| |||||||||||||||||   ||||||| |||||||| | |||||||||    
T  40716836 aatgatgtatgtggtttataatatgtaccacatacatcattaattgaatgaatctaaaaagtaaaatttgcttatatttagaaacggagg 40716747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1121 - 1174
Target Start/End: Complemental strand, 9303360 - 9303307
Alignment:
Q  1121 catcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||| |||||||||| |||||||||||||||| |||||| | |||||||||    
T  9303360 catcattaattgaatgaacctaaaagtcaaaatttgcttataattaaaaacgga 9303307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1079 - 1164
Target Start/End: Original strand, 34194599 - 34194687
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    |||||||||| |||||||||||||||| ||| ||| |||  ||||||||||| |||||||||| ||||||   ||||||| ||||||||    
T  34194599 ttcattcaattaatgatgtatgtggtccatattatgaactacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatt 34194687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1079 - 1176
Target Start/End: Original strand, 43483971 - 43484071
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    |||||||||| |||||||||||||||  ||| |||  ||||  ||||||||| |||||||||| ||||||   ||||||| |||||||| ||||||||||    
T  43483971 ttcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttaaaaacggag 43484070  T
Q  1176 g 1176  Q
    |    
T  43484071 g 43484071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1079 - 1162
Target Start/End: Original strand, 7258624 - 7258711
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-accata--catcattgattgaatgaatctaaaa-gtcaaaatttacttata 1162  Q
    |||||||| | ||| ||||||||||||||||||| | ||||||  ||||||| ||||||||||||||||| || ||| ||||||||||    
T  7258624 ttcattcattaaataatgtatgtggtctataataaagaccatatgcatcattaattgaatgaatctaaaatgtaaaattttacttata 7258711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1113
Target Start/End: Original strand, 1875726 - 1875761
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat 1113  Q
    ||||||||||| ||||||||||||||||||||||||    
T  1875726 gttcattcaattaatgatgtatgtggtctataatat 1875761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1113
Target Start/End: Complemental strand, 9203486 - 9203451
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat 1113  Q
    ||||||||||| ||||||||||||||||||||||||    
T  9203486 gttcattcaattaatgatgtatgtggtctataatat 9203451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Original strand, 27781922 - 27782011
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||||||||||||| ||| |||||    ||||||||||| |||||||||  ||||||   ||||||| ||||||||    
T  27781922 gttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaatgaccctaaaaagtaaaatttgcttatatt 27782011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1082 - 1145
Target Start/End: Complemental strand, 28882762 - 28882696
Alignment:
Q  1082 attcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatctaaaa 1145  Q
    ||||||| |||||| |||||||||||| ||||| ||||  ||||||||| |||||||||||||||||    
T  28882762 attcaataaatgatatatgtggtctattatatataccacatacatcatttattgaatgaatctaaaa 28882696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Complemental strand, 38884048 - 38883959
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||||||||| ||| ||| ||||| |   |||||||||| |||||||||| ||||||   ||||||| ||||||||    
T  38884048 gttcattcaattaatgatgtatgttgtccatattataaaccacatacatcattaattgaatgaacctaaaaaataaaatttgcttatatt 38883959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Complemental strand, 39655519 - 39655449
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| |||||||||||||||| |||||||  ||  ||||||||||| |||||||||| ||||||    
T  39655519 gttcattcaattaatgatgtatgtggtccataatatggaccacatacatcattaattgaatgaacctaaaa 39655449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1079 - 1145
Target Start/End: Original strand, 13964458 - 13964527
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatctaaaa 1145  Q
    |||||||||| |||||||||||||||||||| |||| ||||  ||||||||| | | |||||||||||||    
T  13964458 ttcattcaataaatgatgtatgtggtctatattatagaccatgtacatcatttactcaatgaatctaaaa 13964527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Complemental strand, 34194662 - 34194573
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||||||||| ||  |||||||  ||  ||||||||||| |||||||||||||||||   ||||||| ||||||||    
T  34194662 gttcattcaattaatgatgtatgtagttcataatatggaccacatacatcattaattgaatgaatctaaaaagtaaaatttgcttatatt 34194573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Complemental strand, 35063562 - 35063462
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||| ||| |||||||||||||||  ||| |||| ||  ||||||||||| |||||||||| | ||||||| || ||| |||||||| |||||||||    
T  35063562 gttcatttaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatgaaccaaaaagtc-aattttgcttatatttaaaaacgga 35063464  T
Q  1175 gg 1176  Q
    ||    
T  35063463 gg 35063462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1079 - 1145
Target Start/End: Original strand, 43295927 - 43295996
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaa 1145  Q
    |||||||||| |||||||||||||||| ||| |||| ||  ||||||||||| ||||||||||| |||||    
T  43295927 ttcattcaatgaatgatgtatgtggtccatattatagaccacatacatcatttattgaatgaatttaaaa 43295996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1078 - 1162
Target Start/End: Complemental strand, 5040170 - 5040083
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa-gtcaaaatttacttata 1162  Q
    ||||||||||| |||||||||||| ||  |||||||  ||  ||||||||||| ||||||||||||||||| ||| |||||||||||||    
T  5040170 gttcattcaattaatgatgtatgttgttcataatatggaccacatacatcattaattgaatgaatctaaaatgtc-aaatttacttata 5040083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1079 - 1144
Target Start/End: Original strand, 5040107 - 5040175
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaa 1144  Q
    |||||||||| |||||||||||||||| ||| ||| |||  ||||||||||| |||||||||| |||||    
T  5040107 ttcattcaattaatgatgtatgtggtccatattatgaacaacatacatcattaattgaatgaacctaaa 5040175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1079 - 1164
Target Start/End: Original strand, 7256926 - 7257014
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    |||||||||| ||| |||||||||||| ||| ||| |||  ||||||||||| ||||||||||  |||||   ||||||||||||||||    
T  7256926 ttcattcaattaataatgtatgtggtccatattatgaacgacatacatcattaattgaatgaacttaaaaagtaaaatttacttatatt 7257014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1078 - 1115
Target Start/End: Original strand, 12955541 - 12955578
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataa 1115  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  12955541 gttcattcaattaatgatgtatgtggtccataatataa 12955578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1117 - 1174
Target Start/End: Original strand, 15715107 - 15715164
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||| ||||||   ||||||||||||||||  ||||||||    
T  15715107 catacatcattaattgaatgaacctaaaaactaaaatttacttatattttaaaacgga 15715164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1078 - 1138
Target Start/End: Complemental strand, 42149228 - 42149165
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaa 1138  Q
    ||||||||||| |||||||||| |||||| ||||||||    ||||||||||| ||||||||||    
T  42149228 gttcattcaattaatgatgtatatggtctctaatataaatcacatacatcattaattgaatgaa 42149165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1079 - 1144
Target Start/End: Complemental strand, 44282366 - 44282298
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaa 1144  Q
    |||||||||| |||||||||||||||| | ||||| |||  ||||||||||| |||||||||| |||||    
T  44282366 ttcattcaattaatgatgtatgtggtccacaatatgaaccacatacatcattaattgaatgaacctaaa 44282298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 8e-37; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 8e-37
Query Start/End: Original strand, 1043 - 1176
Target Start/End: Complemental strand, 54787126 - 54786983
Alignment:
Q  1043 tactccctccgttttttaacataagtaaattttgag-------ttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattg 1132  Q
    ||||||||||||||||||| ||||| |||||||||        ||||||||||||||||||||||||||||||||||||| |   |||||||||||||||    
T  54787126 tactccctccgttttttaatataagcaaattttgacatttagattcattcaatcaatgatgtatgtggtctataatataaaccacatacatcattgattg 54787027  T
Q  1133 aatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||||| |||||||||||||||| ||||||||||||||||||||    
T  54787026 aatgaacctaaaagtcaaaatttgcttatattaaaaaacggagg 54786983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 8e-34
Query Start/End: Original strand, 1043 - 1176
Target Start/End: Original strand, 54786978 - 54787121
Alignment:
Q  1043 tactccctccgttttttaacataagtaaattttga-------gttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattg 1132  Q
    ||||||||||||||||||| ||||| |||||||||       ||||||||||||||||||||||||||| |||| |||| ||||  ||||||||||||||    
T  54786978 tactccctccgttttttaatataagcaaattttgacttttaggttcattcaatcaatgatgtatgtggtttatattatagaccacatacatcattgattg 54787077  T
Q  1133 aatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||||||||||| |||||||||| ||||||||||||||||||||    
T  54787078 aatgaatctaaatgtcaaaatttgcttatattaaaaaacggagg 54787121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 3e-27
Query Start/End: Original strand, 1072 - 1178
Target Start/End: Complemental strand, 20542911 - 20542802
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaa 1168  Q
    |||| |||||||||||| |||||||||||||||||||| |||||||   |||||||||| ||||||||||||||||| |||||||||||||||| | |||    
T  20542911 ttttaagttcattcaattaatgatgtatgtggtctatattataacccacatacatcattaattgaatgaatctaaaaatcaaaatttacttataattaaa 20542812  T
Q  1169 aacggaggaa 1178  Q
    || |||||||    
T  20542811 aatggaggaa 20542802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Complemental strand, 21004042 - 21003941
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-accata--catcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||||||||| || ||||||  ||||||| ||||||||||  ||||||||||||||| |||||||| || ||||||    
T  21004042 gttcattcaattaatgatgtatgtggtctataatgtagaccatatacatcattaattgaatgaacttaaaagtcaaaatttgcttatatttaagaacgga 21003943  T
Q  1175 gg 1176  Q
    ||    
T  21003942 gg 21003941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 1079 - 1176
Target Start/End: Complemental strand, 24275318 - 24275218
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-accata--catcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    |||||||||| |||||||||||||||||||||| || ||||||  ||| ||| ||||||||||||||||||| ||||||| |||||||| |||||| |||    
T  24275318 ttcattcaattaatgatgtatgtggtctataatgtagaccatatacataattaattgaatgaatctaaaagttaaaatttgcttatatttaaaaaccgag 24275219  T
Q  1176 g 1176  Q
    |    
T  24275218 g 24275218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 3e-18
Query Start/End: Original strand, 1072 - 1176
Target Start/End: Complemental strand, 40952647 - 40952540
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaa 1168  Q
    |||| |||||||||||| ||| |||||||| || |||| |||| ||  ||||||||||| ||||||||||||||||||||||||||| |||||||| |||    
T  40952647 ttttaagttcattcaattaataatgtatgtagtttatattatagactacatacatcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaa 40952548  T
Q  1169 aacggagg 1176  Q
     |||||||    
T  40952547 tacggagg 40952540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1118 - 1176
Target Start/End: Original strand, 20541174 - 20541232
Alignment:
Q  1118 atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  20541174 atacattattgattgaatgaatctaaaagtcaaaatttgtttatattaaaaaacggagg 20541232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1079 - 1176
Target Start/End: Original strand, 40952578 - 40952678
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    |||||||||| |||||||||||| ||||||||||||| |   |||||| ||| ||||||||||  ||||||||||||||| |||||||| ||| ||||||    
T  40952578 ttcattcaattaatgatgtatgtagtctataatataaactacatacattattaattgaatgaacttaaaagtcaaaatttgcttatatttaaatacggag 40952677  T
Q  1176 g 1176  Q
    |    
T  40952678 g 40952678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Complemental strand, 51126207 - 51126106
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| ||||||||||||||||||||||||| ||  ||||||||||| |||||||||| ||||||   ||||||| ||||||||  ||||||||    
T  51126207 gttcattcaattaatgatgtatgtggtctataatatagaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttaaaacgga 51126108  T
Q  1175 gg 1176  Q
    ||    
T  51126107 gg 51126106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1078 - 1178
Target Start/End: Original strand, 51834569 - 51834672
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat--aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgg 1173  Q
    ||||||||||| |||||||||||||||||| |||||  |||  ||||||||||  |||||||||||||||||| |||||||| |||||| ||||||||||    
T  51834569 gttcattcaattaatgatgtatgtggtcta-aatattaaaccacatacatcatcaattgaatgaatctaaaagccaaaatttgcttataataaaaaacgg 51834667  T
Q  1174 aggaa 1178  Q
     ||||    
T  51834668 tggaa 51834672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1072 - 1176
Target Start/End: Original strand, 21003972 - 21004079
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaa 1168  Q
    |||| |||||||||||| |||||||||| ||||||| | |||| ||||  ||||||||| |||||||||| ||| |||||||||||| |||||| |||||    
T  21003972 ttttaagttcattcaattaatgatgtatatggtctacattatagaccacatacatcattaattgaatgaacctacaagtcaaaatttgcttataataaaa 21004071  T
Q  1169 aacggagg 1176  Q
    ||| ||||    
T  21004072 aactgagg 21004079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1082 - 1174
Target Start/End: Complemental strand, 42013244 - 42013149
Alignment:
Q  1082 attcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||| ||||||||||||||| ||||||||| ||||  ||||||||| ||||||||||| |||||   |||||||||||||||| |||||||||    
T  42013244 attcaattaatgatgtatgtggtttataatatagaccacatacatcattaattgaatgaatttaaaaagtaaaatttacttatatttaaaaacgga 42013149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1043 - 1145
Target Start/End: Complemental strand, 24529717 - 24529605
Alignment:
Q  1043 tactccctccgttttttaacataagtaaa-------ttttgagttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattg 1132  Q
    |||||||||||||||| || |||||||||       |||| |||||||||||| |||||||||||||||||||||||| |||  ||||||||||| ||||    
T  24529717 tactccctccgtttttaaatataagtaaaattgacttttttagttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattg 24529618  T
Q  1133 aatgaatctaaaa 1145  Q
    |||||| ||||||    
T  24529617 aatgaacctaaaa 24529605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Complemental strand, 25856112 - 25856023
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||||||||||||||||| ||| |||||  ||||||||||||| |||||||||||||   ||||||| ||||||||    
T  25856112 gttcattcaattaatgatgtatgtggtctatattatgaaccacatacatcattgattaaatgaatctaaaaagtaaaatttgcttatatt 25856023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Original strand, 44639784 - 44639885
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||| ||||||| |||  ||||||||||| |||||||||||||||||    |||||| |||||||| || ||||||    
T  44639784 gttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaatgaatctaaaaagtgaaatttgcttatatttaagaacgga 44639883  T
Q  1175 gg 1176  Q
    ||    
T  44639884 gg 44639885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1084 - 1176
Target Start/End: Complemental strand, 9968397 - 9968302
Alignment:
Q  1084 tcaatcaatgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||| |||||||||||||||| ||| ||| |||||  ||||||||| |||||||||| ||||||   |||||||||||||||| |||||||||||    
T  9968397 tcaattaatgatgtatgtggtccatattattaaccacatacatcattaattgaatgaacctaaaaagtaaaatttacttatatttaaaaacggagg 9968302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1078 - 1178
Target Start/End: Complemental strand, 26206696 - 26206593
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||| ||| |||||||||||||||| ||| ||| |||||  || |||||| ||||||| |||||||||   |||||||||||||||| |||||||||    
T  26206696 gttcatttaattaatgatgtatgtggtccatattatgaaccacatatatcattaattgaataaatctaaaaagtaaaatttacttatatttaaaaacgga 26206597  T
Q  1175 ggaa 1178  Q
    ||||    
T  26206596 ggaa 26206593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1078 - 1177
Target Start/End: Original strand, 55501240 - 55501342
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| ||||||||||||||| |||| ||| |||||  |||| |||| |||||||||| ||||||   ||||||| |||||||| |||||||||    
T  55501240 gttcattcaattaatgatgtatgtggtttatattatgaaccacatacaccattaattgaatgaacctaaaaagtaaaatttgcttatatttaaaaacgga 55501339  T
Q  1175 gga 1177  Q
    |||    
T  55501340 gga 55501342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1079 - 1145
Target Start/End: Original strand, 11583746 - 11583815
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    |||||||||| |||||||||||||||| ||||||| |||  ||||||||||| |||||||||||||||||    
T  11583746 ttcattcaattaatgatgtatgtggtccataatatgaactacatacatcattaattgaatgaatctaaaa 11583815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1043 - 1174
Target Start/End: Complemental strand, 20541237 - 20541098
Alignment:
Q  1043 tactccctccgttttttaacataagtaaattttgagtt-------cattcaatcaatgatgtatgtggtctataatataac---catacatcattgattg 1132  Q
    ||||||||||||||||||| ||||  ||||||||| ||       |||||||||||| |||||| || ||||||||||||    |||| || ||||||||    
T  20541237 tactccctccgttttttaatataaacaaattttgacttttagattcattcaatcaataatgtatttgttctataatataaatcacatatattattgattg 20541138  T
Q  1133 aatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    |||||| |||||| | ||||||||||  ||||||||||||||    
T  20541137 aatgaacctaaaaattaaaatttact--tattaaaaaacgga 20541098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1118 - 1176
Target Start/End: Original strand, 22624473 - 22624531
Alignment:
Q  1118 atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||||||||| |||||||||| |||||||||||||||| |||||| ||||||| |||||    
T  22624473 atacatcattaattgaatgaacctaaaagtcaaaatttgcttataataaaaaagggagg 22624531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Complemental strand, 30279242 - 30279141
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||||||| ||| |||  |||| |||||| | |||||||| ||||||   ||||||||||||||||  ||||||||    
T  30279242 gttcattcaattaatgatgtatgtggtctatattatgaaccacatagatcattaactgaatgaacctaaaaagtaaaatttacttatattttaaaacgga 30279143  T
Q  1175 gg 1176  Q
    ||    
T  30279142 gg 30279141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Original strand, 51126143 - 51126232
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||||||||||||||||| |||| ||  ||||||||||| |||||||||| ||||||   ||||||| ||||||||    
T  51126143 gttcattcaattaatgatgtatgtggtctatattatagaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatt 51126232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1079 - 1162
Target Start/End: Complemental strand, 23599880 - 23599794
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatataac---catacatcattgattgaatgaatctaaaagtcaaaatttacttata 1162  Q
    |||||||||| ||||||||||||||||||| | |||     ||||||||||| ||||||| || |||||||||||||||| ||||||    
T  23599880 ttcattcaattaatgatgtatgtggtctatgacatagagcacatacatcattaattgaataaacctaaaagtcaaaatttgcttata 23599794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1079 - 1175
Target Start/End: Original strand, 24275256 - 24275355
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    |||||||||| ||| |||||| ||||||| | |||| ||||  ||||||||| ||||||||||| ||||| | |||||||||||||| ||||||| ||||    
T  24275256 ttcattcaattaattatgtatatggtctacattatagaccacatacatcattaattgaatgaatttaaaaattaaaatttacttataataaaaaatggag 24275355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1078 - 1174
Target Start/End: Original strand, 33084755 - 33084853
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aacc--atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||| ||||||| ||||  ||| |||||| ||||||||||| ||||| || || |||||||||||| | |||||||    
T  33084755 gttcattcaattaatgatgtatgtggtccataatatgaaccagatatatcattaattgaatgaatttaaaaatc-aattttacttatatttagaaacgga 33084853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1077 - 1145
Target Start/End: Original strand, 48042628 - 48042699
Alignment:
Q  1077 agttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    |||||||| ||| |||||||||||||||||||||||| |||  ||||||||||| |||||||||| ||||||    
T  48042628 agttcatttaattaatgatgtatgtggtctataatatgaactacatacatcattaattgaatgaacctaaaa 48042699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1079 - 1174
Target Start/End: Original strand, 50038489 - 50038587
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatataac---catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    |||||||||| |||||||||||||||  |||||||      ||||||||||| |||||||||| ||||||   |||||||||||||||| |||||||||    
T  50038489 ttcattcaattaatgatgtatgtggttcataatatggattacatacatcattaattgaatgaacctaaaaagtaaaatttacttatatttaaaaacgga 50038587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1079 - 1174
Target Start/End: Original strand, 50045711 - 50045809
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatataac---catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    |||||||||| |||||||||||||||  |||||||      ||||||||||| |||||||||| ||||||   |||||||||||||||| |||||||||    
T  50045711 ttcattcaattaatgatgtatgtggttcataatatggattacatacatcattaattgaatgaacctaaaaagtaaaatttacttatatttaaaaacgga 50045809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Complemental strand, 23329472 - 23329383
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| | |||||||||||||| ||| ||||| |   |||||||||| |||||||||| ||||||   ||||||||||||||||    
T  23329472 gttcattcaattattgatgtatgtggtccatattataaaccacatacatcattaattgaatgaacctaaaaagtaaaatttacttatatt 23329383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1117 - 1176
Target Start/End: Original strand, 23599859 - 23599918
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||||||| ||||||||||| ||||| ||||||||| |||||| | |||||||||||    
T  23599859 catacatcattaattgaatgaatttaaaaatcaaaatttgcttataattaaaaacggagg 23599918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1072 - 1162
Target Start/End: Original strand, 30162643 - 30162736
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatct-aaaagtcaaaatttacttata 1162  Q
    |||| |||||||||||| |||||||||||||||| ||||||| |||  |||| |||||| |||||||||| || ||||||| |||||||||||||    
T  30162643 ttttaagttcattcaattaatgatgtatgtggtccataatatgaaccacatatatcattaattgaatgaacctaaaaagtc-aaatttacttata 30162736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1117 - 1172
Target Start/End: Complemental strand, 51834591 - 51834536
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacg 1172  Q
    ||||||||||| |||||||||| || |||||| ||||||||||||| |||||||||    
T  51834591 catacatcattaattgaatgaaccttaaagtcgaaatttacttataataaaaaacg 51834536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Complemental strand, 13743960 - 13743871
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| ||||||||||||||| ||||||||  ||  ||||||||||| ||| |||||||||||||   ||||||| ||||||||    
T  13743960 gttcattcaattaatgatgtatgtggtttataatatggaccacatacatcattaattaaatgaatctaaaaagtaaaatttgcttatatt 13743871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Original strand, 23329408 - 23329497
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| ||||||||||||||| ||||||||  ||  ||||||||| | |||||||||| ||||||   ||||||||||||||||    
T  23329408 gttcattcaattaatgatgtatgtggtttataatatggaccacatacatcaataattgaatgaacctaaaaagtaaaatttacttatatt 23329497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Complemental strand, 23710937 - 23710836
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| ||||||||||||||| ||||||||  ||  ||||||||| | |||||||||| ||||||   ||||||| ||||||||  ||||||||    
T  23710937 gttcattcaattaatgatgtatgtggtttataatatggaccacatacatcaataattgaatgaacctaaaaagtaaaatttgcttatattttaaaacgga 23710838  T
Q  1175 gg 1176  Q
    ||    
T  23710837 gg 23710836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Original strand, 29978530 - 29978619
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||||||||||||| ||| ||| |||  ||||||||||| ||||||||||  | ||||  ||||||||||||||||    
T  29978530 gttcattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaatgaaatttaaagataaaatttacttatatt 29978619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Complemental strand, 50038552 - 50038451
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| ||||||||||||  || ||| ||| |||  ||||||||||| |||||||||||||||||   ||||||| |||||||| | |||||||    
T  50038552 gttcattcaattaatgatgtatgtaatccatattatgaaccacatacatcattaattgaatgaatctaaaaagtaaaatttgcttatatttagaaacgga 50038453  T
Q  1175 gg 1176  Q
    ||    
T  50038452 gg 50038451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Complemental strand, 50045774 - 50045673
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| ||||||||||||  || ||| ||| |||  ||||||||||| |||||||||||||||||   ||||||| |||||||| | |||||||    
T  50045774 gttcattcaattaatgatgtatgtaatccatattatgaaccacatacatcattaattgaatgaatctaaaaagtaaaatttgcttatatttagaaacgga 50045675  T
Q  1175 gg 1176  Q
    ||    
T  50045674 gg 50045673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1079 - 1145
Target Start/End: Original strand, 50519301 - 50519370
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    |||||||||| ||| |||||||||||||||||||| |||  ||||||||||| |||||||||| ||||||    
T  50519301 ttcattcaattaattatgtatgtggtctataatatgaaccacatacatcattaattgaatgaacctaaaa 50519370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1079 - 1176
Target Start/End: Original strand, 20542842 - 20542942
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    |||||||||| ||||||||||||||  ||||||||| ||  ||||||||||| ||||||||||  ||||||| |||||||  ||||| | |||||| |||    
T  20542842 ttcattcaattaatgatgtatgtgggttataatatagaccacatacatcattaattgaatgaacttaaaagttaaaatttgattataattaaaaacagag 20542941  T
Q  1176 g 1176  Q
    |    
T  20542942 g 20542942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1079 - 1164
Target Start/End: Original strand, 25856049 - 25856137
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    |||||| |||||||||||||||||||  |||||||| ||  ||||||||||| |||||||||| ||||||   ||||||| ||||||||    
T  25856049 ttcatttaatcaatgatgtatgtggttcataatatagaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatt 25856137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1072 - 1145
Target Start/End: Complemental strand, 32112422 - 32112346
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    |||| |||||||||||| |||||||||||||||| ||| ||| |||  ||||||||||| |||||||||| ||||||    
T  32112422 ttttaagttcattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaatgaacctaaaa 32112346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1072 - 1145
Target Start/End: Complemental strand, 36469979 - 36469903
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||||||| | |||||||||||||||||||| ||| |||  ||||||||||| | |||||| ||||||||    
T  36469979 ttttgagttcattcatttaatgatgtatgtggtctatattatgaaccacatacatcattaaatgaatggatctaaaa 36469903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1091 - 1176
Target Start/End: Original strand, 46779345 - 46779433
Alignment:
Q  1091 atgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||||||||||||| |||| ||| |||||  ||||||||| ||| |||||||||||||   ||||||| |||||||| |||||||||||    
T  46779345 atgatgtatgtggtttatattatgaaccacatacatcattaattaaatgaatctaaaaaataaaatttgcttatatttaaaaacggagg 46779433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1080 - 1164
Target Start/End: Complemental strand, 53551695 - 53551608
Alignment:
Q  1080 tcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatcta-aaagtcaaaatttacttatatt 1164  Q
    ||||||||| |||||||||||||||| ||||||| |||  ||||||||||| ||||||||||  || |||||| |||||||||||||||    
T  53551695 tcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaatgaacttagaaagtc-aaatttacttatatt 53551608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Complemental strand, 5535815 - 5535746
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| | |||||||||||||||||| ||||| |   |||||||||| |||||||||||||||||    
T  5535815 gttcattcaataactgatgtatgtggtctata-tataaactacatacatcatttattgaatgaatctaaaa 5535746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1078 - 1170
Target Start/End: Original strand, 33659810 - 33659905
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaa 1170  Q
    ||||||||||| |||||||||||| || |||| ||| |||||  ||||||||| ||||||| || ||||||   |||||||||||||||| |||||    
T  33659810 gttcattcaattaatgatgtatgtagtatatattatgaaccacatacatcattaattgaataaacctaaaaaataaaatttacttatatttaaaaa 33659905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1082 - 1174
Target Start/End: Original strand, 39754141 - 39754236
Alignment:
Q  1082 attcaatcaatgatgtatgtggtctataatat-aacc--atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||| |||||||||||| ||||||||||| ||||  || ||||||| ||| |||||| ||||||   ||||||| |||||||| |||||||||    
T  39754141 attcaattaatgatgtatgtagtctataatatgaaccagatgcatcattaattaaatgaacctaaaaaataaaatttgcttatatttaaaaacgga 39754236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1123 - 1175
Target Start/End: Complemental strand, 48902098 - 48902046
Alignment:
Q  1123 tcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    ||||| |||||||||||||| |||| ||||||| |||||||| ||||||||||    
T  48902098 tcattaattgaatgaatctagaagttaaaatttgcttatatttaaaaacggag 48902046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1090 - 1145
Target Start/End: Complemental strand, 4484164 - 4484106
Alignment:
Q  1090 aatgatgtatgtggtctataatata-accata--catcattgattgaatgaatctaaaa 1145  Q
    ||||||||||||||||||||||| | ||||||  ||||||| |||||||||||||||||    
T  4484164 aatgatgtatgtggtctataataaagaccatatacatcattaattgaatgaatctaaaa 4484106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1115 - 1178
Target Start/End: Original strand, 15133912 - 15133975
Alignment:
Q  1115 accatacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggaggaa 1178  Q
    ||||||||||||| ||||||||||| |||||   ||||||| ||||||||  ||||||||||||    
T  15133912 accatacatcattaattgaatgaatttaaaaagtaaaatttgcttatattttaaaacggaggaa 15133975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Original strand, 24529611 - 24529712
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaa-tctaaaagtcaaaatttacttatattaaaaaacgg 1173  Q
    ||||||||||| |||||||||||||||  ||| |||| ||  ||||||||||| |||||||||| |  ||||||| || |||||||||||| ||||||||    
T  24529611 gttcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatgaactaaaaaagtc-aattttacttatatttaaaaacgg 24529709  T
Q  1174 agg 1176  Q
    |||    
T  24529710 agg 24529712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1079 - 1145
Target Start/End: Original strand, 42013185 - 42013254
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatctaaaa 1145  Q
    |||||||||| |||||||||||||||||||| |||||    ||||||||||| ||||||| || ||||||    
T  42013185 ttcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattgaataaacctaaaa 42013254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1079 - 1164
Target Start/End: Original strand, 13743897 - 13743985
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    |||||| ||| |||||||||||||||| ||| ||||| |   |||||||||| |||||||||| ||||||   ||||||| ||||||||    
T  13743897 ttcatttaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatt 13743985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1079 - 1176
Target Start/End: Complemental strand, 18328035 - 18327935
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatat-aaccata--catcattgattgaatgaatctaaaa-gtcaaaatttacttatattaaaaaacgga 1174  Q
    |||||||| | |||||||||||||||| ||| ||| |||||||  ||||||| | |||||||| |||||| |||||  |||| |||||||||||||||||    
T  18328035 ttcattcatttaatgatgtatgtggtccatattatgaaccatatacatcattaaatgaatgaacctaaaaagtcaat-tttatttatattaaaaaacgga 18327937  T
Q  1175 gg 1176  Q
    ||    
T  18327936 gg 18327935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1079 - 1176
Target Start/End: Original strand, 18437364 - 18437464
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatat-aaccata--catcattgattgaatgaatctaaaa-gtcaaaatttacttatattaaaaaacgga 1174  Q
    |||||||| | |||||||||||||||| ||| ||| |||||||  ||||||| | |||||||| |||||| |||||  |||| |||||||||||||||||    
T  18437364 ttcattcatttaatgatgtatgtggtccatattatgaaccatatacatcattaaatgaatgaacctaaaaagtcaat-tttatttatattaaaaaacgga 18437462  T
Q  1175 gg 1176  Q
    ||    
T  18437463 gg 18437464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1079 - 1145
Target Start/End: Complemental strand, 19934739 - 19934670
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaa 1145  Q
    |||||||||| |||||||||||||||| || | ||| ||  ||||||||||| |||||||||||||||||    
T  19934739 ttcattcaataaatgatgtatgtggtccattaaatagaccacatacatcatttattgaatgaatctaaaa 19934670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1079 - 1145
Target Start/End: Original strand, 25700496 - 25700565
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatctaaaa 1145  Q
    |||||||| | ||||||||||||| |||| |||||| ||||  ||||||||| |||||||||||||||||    
T  25700496 ttcattcagtaaatgatgtatgtgatctacaatatagaccacatacatcatttattgaatgaatctaaaa 25700565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Complemental strand, 27080144 - 27080057
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| ||| ||||||||||| ||||||||| ||||  |||| |||| ||||||||||||||||| | ||||||| ||||||||    
T  27080144 gttcattcaattaat-atgtatgtggtttataatatagaccacatacaacattaattgaatgaatctaaaaat-aaaatttgcttatatt 27080057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Original strand, 30051381 - 30051470
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| ||||||||| |||||| ||| ||| |||||  ||||||||| |||||| ||||||||||   ||||||| ||||||||    
T  30051381 gttcattcaattaatgatgtacgtggtccatattatgaaccacatacatcattaattgaacgaatctaaaaagtaaaatttgcttatatt 30051470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1079 - 1176
Target Start/End: Original strand, 34709614 - 34709714
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatctaaaa-gtcaaaatttacttatattaaaaaacgga 1174  Q
    |||||||| | |||||||||||||||| ||| ||| |||||  ||||||||| | |||||||| |||||| |||||  ||| ||||||||||||||||||    
T  34709614 ttcattcatttaatgatgtatgtggtccatattatgaaccacatacatcattaaatgaatgaacctaaaaagtcaat-tttgcttatattaaaaaacgga 34709712  T
Q  1175 gg 1176  Q
    ||    
T  34709713 gg 34709714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1118 - 1176
Target Start/End: Original strand, 37306933 - 37306991
Alignment:
Q  1118 atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||||||||| ||||||||||| |||||   |||||||||||||||| |||||| ||||    
T  37306933 atacatcattaattgaatgaatttaaaaagtaaaatttacttatatttaaaaacagagg 37306991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Original strand, 41788959 - 41789048
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||||||||||||| ||||||| |||  ||||||||||| ||||||| ||  |||||    |||||||||||||||    
T  41788959 gttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaataaacttaaaaaatcaaatttacttatatt 41789048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1082 - 1164
Target Start/End: Complemental strand, 43635934 - 43635849
Alignment:
Q  1082 attcaatcaatgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||| |||||||||||| ||  ||||||| |||||  ||||||||| |||||||||||||||||   ||||||| ||||||||    
T  43635934 attcaattaatgatgtatgtagttcataatatgaaccacatacatcattaattgaatgaatctaaaaagtaaaattttcttatatt 43635849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1080 - 1138
Target Start/End: Original strand, 53508540 - 53508601
Alignment:
Q  1080 tcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaa 1138  Q
    ||||||||| |||||||||||||||| ||||||| |||  ||||||||||| ||||||||||    
T  53508540 tcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaatgaa 53508601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1079 - 1145
Target Start/End: Complemental strand, 54164914 - 54164845
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaa 1145  Q
    |||||||||| |||||||||||||||| || | ||| ||  ||||||||||| |||||||||||||||||    
T  54164914 ttcattcaataaatgatgtatgtggtccattaaatagaccacatacatcatttattgaatgaatctaaaa 54164845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1117 - 1178
Target Start/End: Complemental strand, 5289762 - 5289701
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggaggaa 1178  Q
    ||||||||||| |||||||||||||||||   |||||||| ||||||| | ||||| |||||    
T  5289762 catacatcattaattgaatgaatctaaaaagtaaaatttatttatatttagaaacgaaggaa 5289701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1079 - 1112
Target Start/End: Complemental strand, 10308341 - 10308308
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataata 1112  Q
    |||||||||| |||||||||||||||||||||||    
T  10308341 ttcattcaataaatgatgtatgtggtctataata 10308308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1122 - 1162
Target Start/End: Complemental strand, 11844014 - 11843973
Alignment:
Q  1122 atcattgattgaatgaatctaaaa-gtcaaaatttacttata 1162  Q
    |||||||||||||||||| ||||| |||||||||||||||||    
T  11844014 atcattgattgaatgaatttaaaaagtcaaaatttacttata 11843973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1129 - 1170
Target Start/End: Complemental strand, 22624471 - 22624430
Alignment:
Q  1129 attgaatgaatctaaaagtcaaaatttacttatattaaaaaa 1170  Q
    |||||||||| |||||||||||||||| |||||| |||||||    
T  22624471 attgaatgaacctaaaagtcaaaatttgcttataataaaaaa 22624430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1078 - 1178
Target Start/End: Original strand, 23710873 - 23710976
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| | |||||||||||||| ||| |||||    ||||||||||| |||||||||| ||||||   ||||||||  ||||||   |||||||    
T  23710873 gttcattcaattattgatgtatgtggtccatattataaaccacatacatcattaattgaatgaacctaaaaagtaaaatttagatatattttgaaacgga 23710972  T
Q  1175 ggaa 1178  Q
    ||||    
T  23710973 ggaa 23710976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1072 - 1145
Target Start/End: Complemental strand, 31860759 - 31860683
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    |||| |||||||||| | ||||| |||||||||||||| ||| |||  ||||||||||| | |||||||||||||||    
T  31860759 ttttaagttcattcatttaatgacgtatgtggtctatattatgaaccacatacatcattaaatgaatgaatctaaaa 31860683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1078 - 1155
Target Start/End: Complemental strand, 33694071 - 33693991
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-acc--atacatcattgattgaatgaatctaaaagtcaaaattt 1155  Q
    ||||||||| | ||| ||||||||||||||||||| | |||  |||||||||| |||||| ||||||||||  ||||||||    
T  33694071 gttcattcattaaattatgtatgtggtctataataaagaccatatacatcattaattgaacgaatctaaaatgcaaaattt 33693991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1117 - 1174
Target Start/End: Original strand, 34827552 - 34827609
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||||   |||| || |||||||| |||||||||    
T  34827552 catacatcattaattgaatgaatctaaaaaataaaacttgcttatatttaaaaacgga 34827609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 1e-35; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 1e-35
Query Start/End: Original strand, 1043 - 1174
Target Start/End: Complemental strand, 40211296 - 40211155
Alignment:
Q  1043 tactccctccgttttttaacataagtaaattttga-------gttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattg 1132  Q
    ||||||||||||||||||| ||||| |||||||||       |||||||||||||| |||||||||| |||||||||||| |   |||||||||||||||    
T  40211296 tactccctccgttttttaatataagcaaattttgacttttaggttcattcaatcaaagatgtatgtgatctataatataaaccacatacatcattgattg 40211197  T
Q  1133 aatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||||||||||||||| ||||||||||||||||||    
T  40211196 aatgaatctaaaagtcaaaatttgcttatattaaaaaacgga 40211155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 2e-34
Query Start/End: Original strand, 1043 - 1176
Target Start/End: Complemental strand, 31549937 - 31549794
Alignment:
Q  1043 tactccctccgttttttaacataagtaaattttga-------gttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattg 1132  Q
    ||||||||||||||||||| ||||| |||||||||       ||||||||||||||||||||||||||| |||||||||| |   |||||||||||||||    
T  31549937 tactccctccgttttttaatataagcaaattttgacttttaggttcattcaatcaatgatgtatgtggtttataatataaaccacatacatcattgattg 31549838  T
Q  1133 aatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||||| |||||||||||||||| |||||||||||||| |||||    
T  31549837 aatgaacctaaaagtcaaaatttgcttatattaaaaaatggagg 31549794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 8e-34
Query Start/End: Original strand, 1079 - 1176
Target Start/End: Complemental strand, 39970258 - 39970158
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    ||||||||||||||||||||||||||||||||||||| |   ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  39970258 ttcattcaatcaatgatgtatgtggtctataatataaaccacatacatcattgattgaatgaacctaaaagtcaaaatttgcttatattaaaaaacggag 39970159  T
Q  1176 g 1176  Q
    |    
T  39970158 g 39970158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 1e-32
Query Start/End: Original strand, 1042 - 1176
Target Start/End: Original strand, 31549788 - 31549932
Alignment:
Q  1042 atactccctccgttttttaacataagtaaattttga-------gttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgatt 1131  Q
    ||||||||||| |||||||| ||||| |||||||||       ||||||||||||||||||||||||||| |||| ||||| |   ||||||||||||||    
T  31549788 atactccctccattttttaatataagcaaattttgacttttaggttcattcaatcaatgatgtatgtggtttatattataaaccacatacatcattgatt 31549887  T
Q  1132 gaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||    
T  31549888 gaatgaacctaaaagtcaaaatttgcttatattaaaaaacggagg 31549932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 3e-27
Query Start/End: Original strand, 1042 - 1176
Target Start/End: Original strand, 39970152 - 39970296
Alignment:
Q  1042 atactccctccgttttttaacataagtaaattttga-------gttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgatt 1131  Q
    |||||||||||||||||||| ||||| |||||||||       ||||||||||||||||||||||||||| |||| |||| ||||  |||||||||||||    
T  39970152 atactccctccgttttttaatataagcaaattttgacttttaggttcattcaatcaatgatgtatgtggtttatattatagaccacatacatcattgatt 39970251  T
Q  1132 gaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||||||| ||||| | |||||||  |||||||||||||||||||    
T  39970252 gaatgaatttaaaaattaaaatttgtttatattaaaaaacggagg 39970296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 7e-25
Query Start/End: Original strand, 1042 - 1176
Target Start/End: Original strand, 3838114 - 3838258
Alignment:
Q  1042 atactccctccgttttttaacataagtaaattttga-------gttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgatt 1131  Q
    ||||||||||| |||||||| ||||| ||||||| |       ||||||||||||||||||||||||| | |||| |||| ||||  ||||| |||||||    
T  3838114 atactccctccattttttaatataagcaaattttaacttttaggttcattcaatcaatgatgtatgtgatttatattatagaccaaatacattattgatt 3838213  T
Q  1132 gaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||||||||||||||||||||  |||||||||||||||||||    
T  3838214 gaatgaatctaaaagtcaaaatttgtttatattaaaaaacggagg 3838258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 7e-25
Query Start/End: Original strand, 1043 - 1176
Target Start/End: Complemental strand, 3838263 - 3838120
Alignment:
Q  1043 tactccctccgttttttaacataagtaaattttgagtt-------cattcaatcaatgatgtatgtggtctataatataac---catacatcattgattg 1132  Q
    ||||||||||||||||||| ||||  ||||||||| ||       |||||||||||| |||||| |||||||||||||||    ||||||||||||||||    
T  3838263 tactccctccgttttttaatataaacaaattttgacttttagattcattcaatcaataatgtatttggtctataatataaatcacatacatcattgattg 3838164  T
Q  1133 aatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||||| |||||||| ||||||| |||||||||||||| |||||    
T  3838163 aatgaacctaaaagttaaaatttgcttatattaaaaaatggagg 3838120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 7e-25
Query Start/End: Original strand, 1117 - 1176
Target Start/End: Original strand, 32941857 - 32941916
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32941857 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 32941916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 7e-25
Query Start/End: Original strand, 1035 - 1176
Target Start/End: Original strand, 40211140 - 40211291
Alignment:
Q  1035 ctaactaatactccctccgttttttaacataagtaaattttgagtt-------cattcaatcaatgatgtatgtggtctataatataac---catacatc 1124  Q
    |||| ||||| ||| |||||||||||| ||||| ||||||||| ||       |||||||||||||||||||||||| |||| ||||     ||||||||    
T  40211140 ctaattaatattccatccgttttttaatataagcaaattttgacttttagattcattcaatcaatgatgtatgtggtttatattatagatcacatacatc 40211239  T
Q  1125 attgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
     ||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  40211240 tttgattgaatgaacctaaaagtcaaaatttgcttatattaaaaaacggagg 40211291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Complemental strand, 33471592 - 33471503
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||||||||||||||||||||| |||  ||||||||||| |||||||||||||||||   ||||||| ||||||||    
T  33471592 gttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaatgaatctaaaaaataaaatttgcttatatt 33471503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Complemental strand, 3498396 - 3498295
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||| ||| ||||| |   |||||||||| |||||||||||||||||   ||||||| ||||||||  ||||||||    
T  3498396 gttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaatgaatctaaaaagtaaaatttgcttatattttaaaacgga 3498297  T
Q  1175 gg 1176  Q
    ||    
T  3498296 gg 3498295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1090 - 1174
Target Start/End: Original strand, 32389205 - 32389292
Alignment:
Q  1090 aatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||||||| |||||||| |    ||||||||||| ||||||||||| |||||  ||||||||||||||||| |||||||||    
T  32389205 aatgatgtatgtggtttataatatgaatcacatacatcatttattgaatgaatttaaaaagcaaaatttacttatatttaaaaacgga 32389292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1078 - 1178
Target Start/End: Original strand, 45833228 - 45833331
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||  |||||||  || |  ||||||||| |||||||||||||||||   ||||||| |||||||| |||||||||    
T  45833228 gttcattcaattaatgatgtatgtggttcataatatggactacgtacatcattaattgaatgaatctaaaaagtaaaatttgcttatatttaaaaacgga 45833327  T
Q  1175 ggaa 1178  Q
    ||||    
T  45833328 ggaa 45833331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1078 - 1174
Target Start/End: Original strand, 46477171 - 46477270
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| ||||||||||||||| ||||||||  ||  ||||||||||| |||||||||| ||||||   ||||||||||||||||  ||||||||    
T  46477171 gttcattcaattaatgatgtatgtggtttataatatggaccacatacatcattaattgaatgaacctaaaaagtaaaatttacttatattttaaaacgga 46477270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1079 - 1178
Target Start/End: Complemental strand, 47778530 - 47778428
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatataac---catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    |||||||||| |||||||||||| ||| |||||||||    ||||||| ||| |||||||||| ||||||||||||||||  ||||||| |||| | |||    
T  47778530 ttcattcaattaatgatgtatgtagtcgataatataaatcacatacattattaattgaatgaacctaaaagtcaaaatttgtttatatttaaaagcagag 47778431  T
Q  1176 gaa 1178  Q
    |||    
T  47778430 gaa 47778428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Complemental strand, 37066284 - 37066195
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||||||||||||| |||||||| ||  ||||||||||| |||||||||| ||||||   ||||||| ||||||||    
T  37066284 gttcattcaattaatgatgtatgtggtccataatatagaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatt 37066195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Original strand, 37066220 - 37066321
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||||||| |||  ||  ||||||||||| |||||||||| ||||||   ||||||| ||||||||  ||||||||    
T  37066220 gttcattcaattaatgatgtatgtggtctatattatggaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttaaaacgga 37066319  T
Q  1175 gg 1176  Q
    ||    
T  37066320 gg 37066321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1079 - 1164
Target Start/End: Original strand, 3498333 - 3498421
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    |||||||||| ||||||||||||||| ||||||||  ||  ||||||||||| |||||||||| ||||||   ||||||||||||||||    
T  3498333 ttcattcaattaatgatgtatgtggtttataatatggaccacatacatcattaattgaatgaacctaaaaagtaaaatttacttatatt 3498421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1078 - 1178
Target Start/End: Complemental strand, 46477235 - 46477132
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||| ||| ||||| |   |||||||||| |||||||||| ||||||   ||||||| ||||||||  |||| |||    
T  46477235 gttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttaaaatgga 46477136  T
Q  1175 ggaa 1178  Q
    ||||    
T  46477135 ggaa 46477132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1079 - 1176
Target Start/End: Original strand, 46578304 - 46578404
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    |||||||||| ||||||||||||||| |||| ||| |||  ||||||||||| |||||||||| ||||||   ||||||| ||||||||  |||||||||    
T  46578304 ttcattcaattaatgatgtatgtggtttatattatgaactacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttaaaacggag 46578403  T
Q  1176 g 1176  Q
    |    
T  46578404 g 46578404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1117 - 1181
Target Start/End: Complemental strand, 1741940 - 1741876
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggaggaatta 1181  Q
    ||||||||||| |||||||||| |||||||||||||||| |||||| | || |||||||| ||||    
T  1741940 catacatcattaattgaatgaacctaaaagtcaaaatttgcttataattaacaacggagggatta 1741876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1078 - 1174
Target Start/End: Complemental strand, 35593743 - 35593644
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||  |||||||  ||  ||||||||||| ||||||| |||||||||   ||||||||||||||||  ||||||||    
T  35593743 gttcattcaattaatgatgtatgtggttcataatatggaccacatacatcattaattgaataaatctaaaaaataaaatttacttatattttaaaacgga 35593644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Original strand, 10595529 - 10595630
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatct-aaaagtcaaaatttacttatattaaaaaacgg 1173  Q
    ||||||||||| |||||||||| | ||||||||||| |||  ||||||||||| | ||||||||| | ||||||| || |||||||||||||||| ||||    
T  10595529 gttcattcaattaatgatgtatctagtctataatatgaaccacatacatcatttaatgaatgaatttaaaaagtc-aattttacttatattaaaatacgg 10595627  T
Q  1174 agg 1176  Q
    |||    
T  10595628 agg 10595630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Complemental strand, 11032405 - 11032335
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| |||||||||||||||| ||||||| |||  ||||||||||| ||||||||||| |||||    
T  11032405 gttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaatgaatataaaa 11032335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Original strand, 19531991 - 19532080
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||||||||||||| ||| |||||    ||||||||||| |||||||||| ||||||   ||||||| ||||||||    
T  19531991 gttcattcaattaatgatgtatgtggtccatattataaactacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatt 19532080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Complemental strand, 35160851 - 35160781
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| |||||||||| ||||||||||||| |||  ||||||||||| |||||||||| ||||||    
T  35160851 gttcattcaatgaatgatgtatttggtctataatatgaaccacatacatcattaattgaatgaacctaaaa 35160781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Original strand, 36711577 - 36711678
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataata-taac--catacatcattgattgaatgaatc-taaaagtcaaaatttacttatattaaaaaacgg 1173  Q
    ||||||||||| ||||||||||||||| |||||||  |||  |||| |||||| |||||||||| | ||||||| |||||||| ||||||| ||||||||    
T  36711577 gttcattcaattaatgatgtatgtggtttataataggaaccacatatatcattaattgaatgaaccttaaaagt-aaaatttatttatatttaaaaacgg 36711675  T
Q  1174 agg 1176  Q
    |||    
T  36711676 agg 36711678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Original strand, 18732250 - 18732337
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| ||||||||||||||| |||||||| |||  ||||||||| | |||||||||| |||||||| ||||||| ||||||||    
T  18732250 gttcattcaattaatgatgtatgtggtttataatatgaaccacatacatca-taattgaatgaacctaaaagt-aaaatttgcttatatt 18732337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1078 - 1162
Target Start/End: Original strand, 27163203 - 27163291
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatct-aaaagtcaaaatttacttata 1162  Q
    ||||||| ||| |||||||||||||||||||| |||||    ||||||||||| ||| | ||||||| |||||| ||||||||||||||    
T  27163203 gttcattgaataaatgatgtatgtggtctatattataaaccacatacatcatttatttagtgaatctaaaaagtgaaaatttacttata 27163291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Original strand, 46658770 - 46658871
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat--aac-catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| ||||||||||||  |  |||||||  ||| ||||||||||| |||||||||||||||||   ||||||| ||||||||  ||||||||    
T  46658770 gttcattcaattaatgatgtatgtaattcataatatggaacacatacatcattaattgaatgaatctaaaaagtaaaatttgcttatattttaaaacgga 46658869  T
Q  1175 gg 1176  Q
    ||    
T  46658870 gg 46658871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1117 - 1174
Target Start/End: Complemental strand, 13846770 - 13846713
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||| ||||||   |||||||||||||||| |||||||||    
T  13846770 catacatcattaattgaatgaacctaaaaagtaaaatttacttatatttaaaaacgga 13846713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1117 - 1174
Target Start/End: Complemental strand, 18732272 - 18732216
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||| |||||||| |||||||| ||||||| |||||||||    
T  18732272 catacatcattaattgaatgaacctaaaagt-aaaatttatttatatttaaaaacgga 18732216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1072 - 1145
Target Start/End: Complemental strand, 27942433 - 27942357
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatat--aac-catacatcattgattgaatgaatctaaaa 1145  Q
    |||| |||||||||||| ||||||||||||||| ||||||||  | |  |||||||||| |||||||||||||||||    
T  27942433 ttttaagttcattcaattaatgatgtatgtggtttataatatggatcatatacatcattaattgaatgaatctaaaa 27942357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1042 - 1145
Target Start/End: Original strand, 30005871 - 30005984
Alignment:
Q  1042 atactccctccgttttttaacataagtaaa-------ttttgagttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgatt 1131  Q
    ||||||||||||||||| || |||||||||       ||||  ||||||||||| ||||| |||||||||||||||||| |    ||||||||||| |||    
T  30005871 atactccctccgtttttaaatataagtaaaattgacttttttggttcattcaattaatgacgtatgtggtctataatatgaatcacatacatcattaatt 30005970  T
Q  1132 gaatgaatctaaaa 1145  Q
    ||||||| ||||||    
T  30005971 gaatgaacctaaaa 30005984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1042 - 1114
Target Start/End: Complemental strand, 32941922 - 32941843
Alignment:
Q  1042 atactccctccgttttttaacataagtaaattttga-------gttcattcaatcaatgatgtatgtggtctataatata 1114  Q
    |||||||||||||||||||| |||||||||||||||        ||||||||||||||||||||||| || |||| ||||    
T  32941922 atactccctccgttttttaatataagtaaattttgacttttagattcattcaatcaatgatgtatgtagtttatattata 32941843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1079 - 1164
Target Start/End: Original strand, 33471529 - 33471617
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    |||||||||| |||||||||||||||  ||| |||| ||  ||||||||||| |||||||||| ||||||   ||||||||||||||||    
T  33471529 ttcattcaattaatgatgtatgtggttcatattatagaccacatacatcattaattgaatgaacctaaaaaataaaatttacttatatt 33471617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1079 - 1155
Target Start/End: Original strand, 23797387 - 23797466
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatctaaaagtcaaaattt 1155  Q
    |||||||| | |||||||||||| |||||||||| | ||||  ||||||||| |||||||||||||||||  ||||||||    
T  23797387 ttcattcattaaatgatgtatgtagtctataataaagaccagatacatcattaattgaatgaatctaaaatgcaaaattt 23797466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1118 - 1162
Target Start/End: Complemental strand, 41095251 - 41095207
Alignment:
Q  1118 atacatcattgattgaatgaatctaaaagtcaaaatttacttata 1162  Q
    |||||||||| ||||||||||| ||||||||||||||| ||||||    
T  41095251 atacatcattaattgaatgaatttaaaagtcaaaatttgcttata 41095207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1072 - 1164
Target Start/End: Original strand, 46221110 - 46221205
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    |||| |||||||||||| ||||||||||||||| ||||||||  ||  ||||||||||| ||| |||||| ||||||   ||||||| ||||||||    
T  46221110 ttttaagttcattcaattaatgatgtatgtggtttataatatggaccacatacatcattaattaaatgaacctaaaaaataaaatttgcttatatt 46221205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1117 - 1161
Target Start/End: Original strand, 47778509 - 47778553
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttat 1161  Q
    ||||||||||| ||||||||||| ||||||||||||||| |||||    
T  47778509 catacatcattaattgaatgaatttaaaagtcaaaatttgcttat 47778553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1072 - 1175
Target Start/End: Complemental strand, 48392974 - 48392868
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaa 1168  Q
    |||| |||||||||||| ||||||||||||||| |||| ||| |    ||||||||| | ||| |||||||||||||   ||||||| |||||| | |||    
T  48392974 ttttaagttcattcaattaatgatgtatgtggtatatattatgaatcacatacatcactaattaaatgaatctaaaaagtaaaatttgcttataattaaa 48392875  T
Q  1169 aacggag 1175  Q
    |||||||    
T  48392874 aacggag 48392868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Original strand, 12274847 - 12274917
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| |||||||||||||| |||||||||| ||  ||||||| ||  |||||||||||||||||    
T  12274847 gttcattcaataaatgatgtatgtggcctataatatagaccacatacattatatattgaatgaatctaaaa 12274917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Original strand, 28003216 - 28003305
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataac---catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| | |||||||||||||| ||| |||||    ||||||||||| |||||||||| ||||||   ||||||| ||||||||    
T  28003216 gttcattcaattattgatgtatgtggtccatattataaatcacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatt 28003305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1117 - 1176
Target Start/End: Complemental strand, 33784120 - 33784061
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||||||| ||||||||||| |||||   ||||||||||||||||  ||||||||||    
T  33784120 catacatcattaattgaatgaatttaaaaagtaaaatttacttatattttaaaacggagg 33784061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Original strand, 35160787 - 35160888
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-acc--atacatcattgattgaatgaatct-aaaagtcaaaatttacttatattaaaaaacgg 1173  Q
    ||||||||||| |||||||||||||||  ||| |||| |||  |||||||||| |||||||||| || ||||||| || ||| |||||||| ||||||||    
T  35160787 gttcattcaattaatgatgtatgtggttcatattatagaccaaatacatcattcattgaatgaacctaaaaagtc-aattttgcttatatttaaaaacgg 35160885  T
Q  1174 agg 1176  Q
    |||    
T  35160886 agg 35160888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Complemental strand, 41699158 - 41699088
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||| | |||||||||||||||||||||||| |||  ||||||||||| | |||||||| ||||||    
T  41699158 gttcattcatttaatgatgtatgtggtctataatatgaaccacatacatcattaaatgaatgaacctaaaa 41699088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1117 - 1176
Target Start/End: Original strand, 46774595 - 46774654
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||||| | |||||||||| |||||||  |||||||||||||||| | |||||||||    
T  46774595 catacatcaataattgaatgaacctaaaaggtaaaatttacttatatttagaaacggagg 46774654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1080 - 1114
Target Start/End: Complemental strand, 1742265 - 1742231
Alignment:
Q  1080 tcattcaatcaatgatgtatgtggtctataatata 1114  Q
    ||||||||| |||||||||||||||||||||||||    
T  1742265 tcattcaattaatgatgtatgtggtctataatata 1742231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1117 - 1175
Target Start/End: Original strand, 5691556 - 5691614
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    ||||||||||| ||||||||||| |||||   ||||||| |||||||| ||||||||||    
T  5691556 catacatcattaattgaatgaatttaaaatgtaaaatttgcttatatttaaaaacggag 5691614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Complemental strand, 19532055 - 19531966
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||||||||| || ||||||||  ||  ||||||||||| |||||||||| ||||||   ||||||| ||||||||    
T  19532055 gttcattcaattaatgatgtatgtagtttataatatggaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatt 19531966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Complemental strand, 24211653 - 24211564
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||||||| || || ||| ||| |||||  ||||| ||| |||||||||||||||||   ||||||||||||||||    
T  24211653 gttcattcaattaatgatgtatatgatccatattatgaaccacatacattattaattgaatgaatctaaaaagtaaaatttacttatatt 24211564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1079 - 1144
Target Start/End: Complemental strand, 27242515 - 27242447
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata---accatacatcattgattgaatgaatctaaa 1144  Q
    |||||||||| ||||||| ||||||||| || ||||   | ||||||||||| ||||||||||||||||    
T  27242515 ttcattcaataaatgatgcatgtggtctttattatagacaacatacatcattcattgaatgaatctaaa 27242447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Complemental strand, 28003280 - 28003179
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| ||||||||||||| | ||||||||  ||  ||||||||| | |||||||||| ||||||   ||||||| ||||||||  ||||||||    
T  28003280 gttcattcaattaatgatgtatgtgatttataatatggaccacatacatcaataattgaatgaacctaaaaagtaaaatttgcttatattttaaaacgga 28003181  T
Q  1175 gg 1176  Q
    ||    
T  28003180 gg 28003179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1082 - 1164
Target Start/End: Original strand, 35593683 - 35593768
Alignment:
Q  1082 attcaatcaatgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||| |||||||||||||||| ||| ||| |||||  ||||||||| |||||||||| ||||||   ||||||| ||||||||    
T  35593683 attcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaatgaacctaaaatataaaatttgcttatatt 35593768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1079 - 1145
Target Start/End: Complemental strand, 43813226 - 43813157
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaa 1145  Q
    |||||||||| |||||||||||||||| ||| |||| ||  ||||| ||||| |||||||||||||||||    
T  43813226 ttcattcaataaatgatgtatgtggtcaatattatagactacatacttcatttattgaatgaatctaaaa 43813157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1072 - 1145
Target Start/End: Complemental strand, 7208772 - 7208696
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||||||| | |||||||||||||||| ||| ||| |||  ||||||||||| | | |||||||||||||    
T  7208772 ttttgagttcattcatttaatgatgtatgtggtccatattatgaaccacatacatcattaaataaatgaatctaaaa 7208696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1117 - 1174
Target Start/End: Complemental strand, 20353117 - 20353060
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||| ||||||   ||||||| |||||||| |||||||||    
T  20353117 catacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttaaaaacgga 20353060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1090 - 1162
Target Start/End: Complemental strand, 27163255 - 27163179
Alignment:
Q  1090 aatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatct-aaaagtcaaaatttacttata 1162  Q
    ||||||||||||||| ||||||||| ||  ||||||||||| ||| |||||| || ||||||||||||||| |||||    
T  27163255 aatgatgtatgtggtttataatatagaccacatacatcatttattcaatgaacctaaaaagtcaaaatttatttata 27163179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1071 - 1112
Target Start/End: Complemental strand, 28306424 - 28306383
Alignment:
Q  1071 attttgagttcattcaatcaatgatgtatgtggtctataata 1112  Q
    |||||||||||||||| | |||||||||| ||||||||||||    
T  28306424 attttgagttcattcatttaatgatgtatatggtctataata 28306383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1079 - 1176
Target Start/End: Complemental strand, 45833291 - 45833191
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    |||||||||| ||||||||| || ||| ||| ||| |||||  ||||||||| |||||||||| ||||||   |||||||  ||||||| ||||||||||    
T  45833291 ttcattcaattaatgatgtacgtagtccatattatgaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgtttatatttaaaaacggag 45833192  T
Q  1176 g 1176  Q
    |    
T  45833191 g 45833191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1042 - 1075
Target Start/End: Original strand, 46774525 - 46774558
Alignment:
Q  1042 atactccctccgttttttaacataagtaaatttt 1075  Q
    |||||||||||||||||||| |||||||||||||    
T  46774525 atactccctccgttttttaatataagtaaatttt 46774558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 3e-33; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 3e-33
Query Start/End: Original strand, 1042 - 1181
Target Start/End: Original strand, 4637002 - 4637151
Alignment:
Q  1042 atactccctccgttttttaacataagtaaattttga-------gttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgatt 1131  Q
    |||||||||| ||||||||| ||||| |||||||||       ||||||||||||||| |||||||||||||||||||||| |   |||||||||| |||    
T  4637002 atactccctctgttttttaatataagcaaattttgacttttaggttcattcaatcaataatgtatgtggtctataatataaaccacatacatcattaatt 4637101  T
Q  1132 gaatgaatctaaaagtcaaaatttacttatattaaaaaacggaggaatta 1181  Q
    ||||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  4637102 gaatgaatctaaaagtcaaaatttgtttatattaaaaaacggagggatta 4637151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 5e-32
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Complemental strand, 37396306 - 37396205
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||||||||||||||||||||||||||||||     |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  37396306 gttcattcaatcaatgatgtatgtggtctataatataaatcatatacatcattaattgaatgaatctaaaagtcaaaatttgcttatattaaaaaacgga 37396207  T
Q  1175 gg 1176  Q
    ||    
T  37396206 gg 37396205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 1079 - 1176
Target Start/End: Complemental strand, 4637108 - 4637008
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    |||||||||| ||||||||||||||| |||| |||| ||||  ||||| |||||||||||||| |||||||||||||||| ||||||||||||||| |||    
T  4637108 ttcattcaattaatgatgtatgtggtttatattatagaccacatacattattgattgaatgaacctaaaagtcaaaatttgcttatattaaaaaacagag 4637009  T
Q  1176 g 1176  Q
    |    
T  4637008 g 4637008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 3e-21
Query Start/End: Original strand, 1042 - 1170
Target Start/End: Original strand, 37396199 - 37396337
Alignment:
Q  1042 atactccctccgttttttaacataagtaaattttgagtt-------cattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgatt 1131  Q
    |||||||||||||||||||| ||||| ||||||||| ||       |||||||| |||||||||| || | |||| |||| ||||  |||||||||||||    
T  37396199 atactccctccgttttttaatataagcaaattttgacttttagattcattcaattaatgatgtatatgatttatattatagaccacatacatcattgatt 37396298  T
Q  1132 gaatgaatctaaaagtcaaaatttacttatattaaaaaa 1170  Q
    ||||||| |||||||||||||||| ||||||||||||||    
T  37396299 gaatgaacctaaaagtcaaaatttgcttatattaaaaaa 37396337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 1072 - 1176
Target Start/End: Complemental strand, 9071313 - 9071206
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaa 1168  Q
    |||| |||||||||||| ||| ||||||||||| |||| |||| ||  ||||||||||| ||||||||||||||||||||||||||| |||||||| |||    
T  9071313 ttttaagttcattcaattaataatgtatgtggtttatattatagactacatacatcattaattgaatgaatctaaaagtcaaaatttgcttatatttaaa 9071214  T
Q  1169 aacggagg 1176  Q
     |||||||    
T  9071213 tacggagg 9071206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 1077 - 1176
Target Start/End: Complemental strand, 5580353 - 5580251
Alignment:
Q  1077 agttcattcaatcaatgatgtatgtggtctataatat--aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacg 1172  Q
    |||||||||||| |||||||||||||||||| |||||  |||  ||||||||||| ||||||||||||||||||  ||||||| |||||| |||||||||    
T  5580353 agttcattcaattaatgatgtatgtggtcta-aatattaaaccacatacatcattaattgaatgaatctaaaagctaaaatttgcttataataaaaaacg 5580255  T
Q  1173 gagg 1176  Q
    ||||    
T  5580254 gagg 5580251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1079 - 1176
Target Start/End: Original strand, 9071244 - 9071344
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    |||||||||| |||||||||||| ||||||||||||| |   |||||| ||| ||||||||||  ||||||||||||||| |||||||| ||| ||||||    
T  9071244 ttcattcaattaatgatgtatgtagtctataatataaaccacatacattattaattgaatgaacttaaaagtcaaaatttgcttatatttaaatacggag 9071343  T
Q  1176 g 1176  Q
    |    
T  9071344 g 9071344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1072 - 1176
Target Start/End: Complemental strand, 10041650 - 10041543
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaa 1168  Q
    |||| |||||||||||| |||||||||||||||||||| |||||    ||||||||||| ||| |||||||||||||   ||||||| |||||||| | |    
T  10041650 ttttaagttcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattaaatgaatctaaaatgtaaaattttcttatatttaga 10041551  T
Q  1169 aacggagg 1176  Q
    ||||||||    
T  10041550 aacggagg 10041543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1078 - 1178
Target Start/End: Complemental strand, 20195391 - 20195288
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||| ||| ||| |    ||||||||||| |||||||||||||||||   ||||||||||||||||  ||||||||    
T  20195391 gttcattcaattaatgatgtatgtggtccatattatgaatcacatacatcattaattgaatgaatctaaaaagtaaaatttacttatattttaaaacgga 20195292  T
Q  1175 ggaa 1178  Q
    ||||    
T  20195291 ggaa 20195288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1117 - 1176
Target Start/End: Complemental strand, 19822438 - 19822379
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||| |||||||||||||||||  ||||||| ||||||||||||||||||||||||||||    
T  19822438 catatatcattgattgaatgaacttaaaagttaaaatttacttatattaaaaaacggagg 19822379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1117 - 1176
Target Start/End: Complemental strand, 19842659 - 19842600
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||| |||||||||||||||||  ||||||| ||||||||||||||||||||||||||||    
T  19842659 catatatcattgattgaatgaacttaaaagttaaaatttacttatattaaaaaacggagg 19842600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1119 - 1176
Target Start/End: Original strand, 9895264 - 9895321
Alignment:
Q  1119 tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||||| ||||||| ||| |||||||||||||||||||||| |||||||||||||    
T  9895264 tacatcattaattgaataaatttaaaagtcaaaatttacttataataaaaaacggagg 9895321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1117 - 1174
Target Start/End: Original strand, 40534669 - 40534726
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||  ||||||||    
T  40534669 catacatcattaattgaatgaatctaaaagttaaaatttacttatattttaaaacgga 40534726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1078 - 1172
Target Start/End: Complemental strand, 30202586 - 30202489
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatct-aaaagtcaaaatttacttatattaaaaaacg 1172  Q
    ||||||||||| |||||||||||| ||||||||||| |    |||||||||||||||||||||| || ||||||| |||||| |||||||| |||||||    
T  30202586 gttcattcaattaatgatgtatgtagtctataatatgaatcacatacatcattgattgaatgaacctaaaaagtc-aaatttgcttatatttaaaaacg 30202489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Complemental strand, 4898267 - 4898166
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataac---catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||| ||| |||||    ||||||||||| |||||||||| ||||||   ||||||| |||||||| | |||||||    
T  4898267 gttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttagaaacgga 4898168  T
Q  1175 gg 1176  Q
    ||    
T  4898167 gg 4898166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Complemental strand, 4945661 - 4945560
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataac---catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||| ||| |||||    ||||||||||| |||||||||| ||||||   ||||||| |||||||| | |||||||    
T  4945661 gttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttagaaacgga 4945562  T
Q  1175 gg 1176  Q
    ||    
T  4945561 gg 4945560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Complemental strand, 32070563 - 32070474
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||||||||||||| ||||||| |||  ||||||||||| |||||||||| ||||||    |||||||||||||||    
T  32070563 gttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaatgaacctaaaaaatcaaatttacttatatt 32070474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1082 - 1176
Target Start/End: Original strand, 37486041 - 37486138
Alignment:
Q  1082 attcaatcaatgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||| |||||||||||||||| ||||||| |||||  ||||||||| |||||||||| ||||||   ||||||| |||||||| | |||||||||    
T  37486041 attcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttagaaacggagg 37486138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1079 - 1176
Target Start/End: Original strand, 5580289 - 5580389
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    |||||||||| ||||||||||||||| ||  || || ||||  ||||||||| ||||||||||  | ||||||||||||| |||||| ||||||||||||    
T  5580289 ttcattcaattaatgatgtatgtggtttaatatttagaccacatacatcattaattgaatgaactttaaagtcaaaatttgcttataataaaaaacggag 5580388  T
Q  1176 g 1176  Q
    |    
T  5580389 g 5580389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1129 - 1178
Target Start/End: Complemental strand, 9895258 - 9895209
Alignment:
Q  1129 attgaatgaatctaaaagtcaaaatttacttatattaaaaaacggaggaa 1178  Q
    ||||||||||| ||||||||||||||| |||||| |||||||||||||||    
T  9895258 attgaatgaatttaaaagtcaaaatttgcttataataaaaaacggaggaa 9895209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1119 - 1176
Target Start/End: Complemental strand, 15178072 - 15178015
Alignment:
Q  1119 tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||||| ||||||||||  ||||||||||||||| |||||| |||||||||||||    
T  15178072 tacatcattaattgaatgaacttaaaagtcaaaatttgcttataataaaaaacggagg 15178015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1072 - 1164
Target Start/End: Complemental strand, 17844059 - 17843964
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    |||| |||||||||||| |||||||||||||||| ||| ||||| |   |||||||||| |||||||||| ||||||   ||||||| ||||||||    
T  17844059 ttttaagttcattcaattaatgatgtatgtggtccatattataaaccatatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatt 17843964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1072 - 1174
Target Start/End: Original strand, 29712519 - 29712623
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatataac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaa 1169  Q
    |||| |||||||||||| ||||||||||||||| |||||||  ||  ||||||||||| |||||||||| ||||||   ||||||| |||| ||  ||||    
T  29712519 ttttaagttcattcaattaatgatgtatgtggtttataataggaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttacatataaaa 29712618  T
Q  1170 acgga 1174  Q
    |||||    
T  29712619 acgga 29712623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1079 - 1176
Target Start/End: Original strand, 42579058 - 42579158
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    |||||| ||| |||||||||||| ||| ||| ||| |||||  ||||||||| |||||||||||||||||   |||||||||||||||| ||||| ||||    
T  42579058 ttcatttaattaatgatgtatgtagtccatattatgaaccacatacatcattaattgaatgaatctaaaaagtaaaatttacttatatttaaaaatggag 42579157  T
Q  1176 g 1176  Q
    |    
T  42579158 g 42579158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1072 - 1176
Target Start/End: Complemental strand, 32473579 - 32473472
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaa 1168  Q
    |||| ||||| || ||| |||||| ||||||||||||| ||| |||||  ||||||||| |||||||||||||||||   ||||||| |||||||| |||    
T  32473579 ttttaagttcttttaattaatgatatatgtggtctatattatgaaccacatacatcattaattgaatgaatctaaaaaataaaatttgcttatatttaaa 32473480  T
Q  1169 aacggagg 1176  Q
    || |||||    
T  32473479 aatggagg 32473472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1072 - 1164
Target Start/End: Original strand, 43514788 - 43514883
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatata-acc--atacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    |||| |||||||||||| |||||||||||||||  |||||||| |||  |||||||||| |||||||||| ||||||   ||||||| ||||||||    
T  43514788 ttttaagttcattcaattaatgatgtatgtggttcataatatagaccatatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatt 43514883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Complemental strand, 10099654 - 10099553
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||| ||||||||||||| |||||    ||||||||||| ||| |||||| ||||||   ||||||| |||||||| | |||||||    
T  10099654 gttcattcaattaatgatatatgtggtctatattataaaccacatacatcattaattaaatgaacctaaaatgtaaaatttgcttatatttagaaacgga 10099555  T
Q  1175 gg 1176  Q
    ||    
T  10099554 gg 10099553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1079 - 1184
Target Start/End: Complemental strand, 5094941 - 5094833
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatat-aaccata--catcattgattgaatgaatctaaaa-gtcaaaatttacttatattaaaaaacgga 1174  Q
    |||||||| | |||||||||||||||| ||| ||| |||||||  ||||||| | |||||||| |||||| |||||  ||| ||||||||||||||||||    
T  5094941 ttcattcatttaatgatgtatgtggtccatattatgaaccatatacatcattaaatgaatgaacctaaaaagtcaat-tttgcttatattaaaaaacgga 5094843  T
Q  1175 ggaattacaa 1184  Q
    || |||||||    
T  5094842 gggattacaa 5094833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1082 - 1176
Target Start/End: Complemental strand, 8554769 - 8554672
Alignment:
Q  1082 attcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||| |||||||||||||||  |||||||  ||||  || |||||| ||| |||||||||||||   ||||||| ||||||||||||||||||||    
T  8554769 attcaattaatgatgtatgtggttcataatatggaccacatatatcattaattaaatgaatctaaaaagtaaaatttgcttatattaaaaaacggagg 8554672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Original strand, 10099590 - 10099679
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||| ||| ||||||||||||||| ||||||||| ||  |||| |||||| |||||||||| |||||||  |||||||| |||||||    
T  10099590 gttcatttaattaatgatgtatgtggtttataatatagaccacatatatcattaattgaatgaacctaaaaggtaaaatttatttatatt 10099679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Original strand, 40739530 - 40739619
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||| ||||||||| ||||||| |||  ||||||||||| |||||||||| ||||||    |||||||||||||||    
T  40739530 gttcattcaattaatgatatatgtggtccataatatgaaccacatacatcattaattgaatgaacctaaaaaatcaaatttacttatatt 40739619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1117 - 1174
Target Start/End: Complemental strand, 40534502 - 40534445
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||| ||| ||||||||||  ||||||||||||||| |||||||| |||||||||    
T  40534502 catacattattaattgaatgaacttaaaagtcaaaatttgcttatatttaaaaacgga 40534445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1090 - 1145
Target Start/End: Complemental strand, 11153295 - 11153237
Alignment:
Q  1090 aatgatgtatgtggtctataatataacc---atacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||||||||||||||| | ||   |||||||||| |||||||||||||||||    
T  11153295 aatgatgtatgtggtctataataaagcccacatacatcattaattgaatgaatctaaaa 11153237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1078 - 1138
Target Start/End: Original strand, 17378093 - 17378156
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaa 1138  Q
    ||||||||||| |||||||||||||||||| ||||| |||  ||||||||||| ||||||||||    
T  17378093 gttcattcaattaatgatgtatgtggtctacaatatgaaccacatacatcattaattgaatgaa 17378156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1078 - 1174
Target Start/End: Original strand, 32070499 - 32070598
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||  ||| |||  ||||  ||||||||| |||||||||| ||||||   ||||||| |||||||| |||||||||    
T  32070499 gttcattcaattaatgatgtatgtggttcatattatggaccacatacatcattaattgaatgaacctaaaatgtaaaatttgcttatatttaaaaacgga 32070598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1078 - 1178
Target Start/End: Complemental strand, 34911200 - 34911097
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||| ||| ||| |||  ||||||||||| ||||||| || ||||||   ||||||| ||||||||  || |||||    
T  34911200 gttcattcaattaatgatgtatgtggtcgatattatgaaccacatacatcattaattgaataaacctaaaaaataaaatttgcttatattttaagacgga 34911101  T
Q  1175 ggaa 1178  Q
    ||||    
T  34911100 ggaa 34911097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Complemental strand, 41824362 - 41824293
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| ||||||||||||||||||| ||||||    ||||||| ||| |||||||||||||||||    
T  41824362 gttcattcaataaatgatgtatgtggtctat-atataaactacatacataatttattgaatgaatctaaaa 41824293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Complemental strand, 2795412 - 2795342
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| |||||||||||||||| ||||||| |||  ||||||||||| ||| ||||||| |||||    
T  2795412 gttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattaaatgaatttaaaa 2795342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1160
Target Start/End: Complemental strand, 3198060 - 3197974
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa-gtcaaaatttactta 1160  Q
    |||| |||||| ||| |||||||||||||||||||| |||  ||||||||||  ||||||||||| ||||| || ||||||||||||    
T  3198060 gttccttcaataaataatgtatgtggtctataatatgaactacatacatcatgtattgaatgaatttaaaatgtaaaaatttactta 3197974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Original strand, 25668449 - 25668550
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| ||||||||||||| || ||| ||||| |   |||||||||| ||| |||||| ||||||   ||||||| |||||||| | |||||||    
T  25668449 gttcattcaattaatgatgtatgtgatccatattataaaccacatacatcattaattaaatgaacctaaaaagtaaaatttgcttatatttagaaacgga 25668548  T
Q  1175 gg 1176  Q
    ||    
T  25668549 gg 25668550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Original strand, 27327868 - 27327938
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aacc--atacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| |||||||||||||||| ||||||| || |  |||||||||| |||||||||| ||||||    
T  27327868 gttcattcaattaatgatgtatgtggtccataatatgaatcagatacatcattaattgaatgaacctaaaa 27327938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Original strand, 5144306 - 5144395
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| ||||||||||||||| ||||||||  ||  ||||||||||| ||| |||||| ||||||   |||||||| |||||||    
T  5144306 gttcattcaattaatgatgtatgtggtttataatatggaccacatacatcattaattaaatgaacctaaaaagtaaaatttatttatatt 5144395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Complemental strand, 24971307 - 24971218
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||||||||| ||| |||||||  ||  |||||||||||  ||||||||||||||||   ||||||| ||||||||    
T  24971307 gttcattcaattaatgatgtatgtagtccataatatggaccacatacatcattagttgaatgaatctaaaaagtaaaatttgcttatatt 24971218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Complemental strand, 43514858 - 43514769
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||||||| ||||||||| ||| |||  ||||||||||| ||||||||||  |||||   ||||||| ||||||||    
T  43514858 gttcattcaattaatgatgtatatggtctatattatgaaccacatacatcattaattgaatgaacttaaaaagtaaaatttgcttatatt 43514769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1078 - 1174
Target Start/End: Complemental strand, 5144370 - 5144271
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||| ||| |||||||||||||||| ||| ||||| |   |||||||||| |||||||||| ||||||   ||||||| ||||| ||  ||||||||    
T  5144370 gttcatttaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatgttttaaaacgga 5144271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1079 - 1164
Target Start/End: Original strand, 10041581 - 10041669
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    |||||| ||| ||||||||||||||| ||||||||| ||  ||||||||||| ||||||||||  |||||   |||||||| |||||||    
T  10041581 ttcatttaattaatgatgtatgtggtttataatatagaccacatacatcattaattgaatgaacttaaaaagtaaaatttatttatatt 10041669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1117 - 1170
Target Start/End: Original strand, 27743696 - 27743749
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaa 1170  Q
    ||||||||||| |||||||||||||||||   |||||||| ||||||| |||||    
T  27743696 catacatcattaattgaatgaatctaaaaagtaaaatttatttatatttaaaaa 27743749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1117 - 1174
Target Start/End: Original strand, 28680919 - 28680976
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||||   |||||||  ||||||| |||||||||    
T  28680919 catacatcattaattgaatgaatctaaaaagaaaaatttgtttatatttaaaaacgga 28680976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1072 - 1113
Target Start/End: Complemental strand, 30905232 - 30905191
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatat 1113  Q
    |||| |||||||||||| ||||||||||||||| ||||||||    
T  30905232 ttttaagttcattcaattaatgatgtatgtggtttataatat 30905191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1118 - 1178
Target Start/End: Complemental strand, 31175140 - 31175079
Alignment:
Q  1118 atacatcattgattgaatgaatctaaaa-gtcaaaatttacttatattaaaaaacggaggaa 1178  Q
    |||||||||| |||||||||||||||||  | |||||||||||||| | || ||||||||||    
T  31175140 atacatcattaattgaatgaatctaaaatataaaaatttacttataattaacaacggaggaa 31175079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1117 - 1174
Target Start/End: Original strand, 38262065 - 38262122
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||| ||||||   ||||||| |||||||| |||||||||    
T  38262065 catacatcattaattgaatgaacctaaaaaataaaatttgcttatatttaaaaacgga 38262122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1078 - 1115
Target Start/End: Complemental strand, 41823843 - 41823806
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataa 1115  Q
    ||||||| ||| ||||||||||||||||||||||||||    
T  41823843 gttcatttaattaatgatgtatgtggtctataatataa 41823806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1117 - 1178
Target Start/End: Complemental strand, 45095575 - 45095515
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggaggaa 1178  Q
    ||||||||||| |||||||||| |||||| | |||||||  ||||||| |||||||||||||    
T  45095575 catacatcattaattgaatgaacctaaaaat-aaaatttgtttatatttaaaaacggaggaa 45095515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 5e-32; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 5e-32
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Original strand, 22528890 - 22528991
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    |||||||||||||||||||||||||||||||||||||| |   ||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||    
T  22528890 gttcattcaatcaatgatgtatgtggtctataatataaaccacatacatcattgattgaatgaatctaaaagttcaaatttgcttatattaaaaaacgga 22528989  T
Q  1175 gg 1176  Q
    ||    
T  22528990 gg 22528991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 3e-27
Query Start/End: Original strand, 1079 - 1178
Target Start/End: Complemental strand, 22528953 - 22528851
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    |||||||||||||||||||||||||| |||| |||| ||||  |||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||    
T  22528953 ttcattcaatcaatgatgtatgtggtttatattatagaccacatacatcattgattgaatgaacctaaaagtctaaatttgcttatattaaaaaacggag 22528854  T
Q  1176 gaa 1178  Q
    |||    
T  22528853 gaa 22528851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 4e-20
Query Start/End: Original strand, 1043 - 1176
Target Start/End: Original strand, 54726051 - 54726194
Alignment:
Q  1043 tactccctccgttttttaacataagtaaattttga-------gttcattcaatcaatgatgtatgtggtctataatataac---catacatcattgattg 1132  Q
    |||||||||||||||| || ||||| |||||||||       ||||||||||| ||| || ||||||||||||| |||||    |||| |||||| |||     
T  54726051 tactccctccgtttttaaatataagcaaattttgatttttaggttcattcaattaataatatatgtggtctatattataaatcacatatatcattaatta 54726150  T
Q  1133 aatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||||||||||||||||||| |||||||| |||||||||||    
T  54726151 aatgaatctaaaagtcaaaatttgcttatatttaaaaacggagg 54726194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Original strand, 22995734 - 22995835
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||| ||| ||||||||||||||| |||||||| |||||  ||||||||| |||||||||| ||||||  |||||||| |||||||| |||||||||    
T  22995734 gttcatttaattaatgatgtatgtggtttataatatgaaccacatacatcattaattgaatgaacctaaaaagcaaaatttgcttatatttaaaaacgga 22995833  T
Q  1175 gg 1176  Q
    ||    
T  22995834 gg 22995835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1072 - 1178
Target Start/End: Complemental strand, 26043358 - 26043249
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatata-accat--acatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaa 1168  Q
    |||| |||||||||||| |||||||||||||||  |||||||  |||||  |||||||| ||| |||||||||||||   |||||||||||||||| |||    
T  26043358 ttttaagttcattcaattaatgatgtatgtggttcataatatggaccatgtacatcattaattcaatgaatctaaaaagtaaaatttacttatatttaaa 26043259  T
Q  1169 aacggaggaa 1178  Q
    ||||||||||    
T  26043258 aacggaggaa 26043249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1118 - 1176
Target Start/End: Complemental strand, 1043966 - 1043908
Alignment:
Q  1118 atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||||||||| |||||||||| || ||||||||||||| ||||||||||||||||||||    
T  1043966 atacatcattaattgaatgaacctgaaagtcaaaatttgcttatattaaaaaacggagg 1043908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1079 - 1171
Target Start/End: Complemental strand, 52638134 - 52638040
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaac 1171  Q
    |||||||||| |||||||||||||||| |||||||||    ||||||| ||| |||||||||| |||||| ||||||||| |||||||| ||||||    
T  52638134 ttcattcaattaatgatgtatgtggtcgataatataaatcacatacattattaattgaatgaacctaaaa-tcaaaatttgcttatatttaaaaac 52638040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1079 - 1178
Target Start/End: Complemental strand, 29076626 - 29076524
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatataac---catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    |||||||||| |||||||||||||||| || ||||||    |||| |||||| |||||||||| |||||||   || |||||||||||| ||||||||||    
T  29076626 ttcattcaattaatgatgtatgtggtccatgatataaatcacatatatcattaattgaatgaacctaaaagatcaattttacttatatttaaaaacggag 29076527  T
Q  1176 gaa 1178  Q
    |||    
T  29076526 gaa 29076524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1117 - 1176
Target Start/End: Original strand, 1044003 - 1044062
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||||||| ||| |||||| |||||||| ||||||| ||||||||||||||||||||    
T  1044003 catacatcattaattaaatgaacctaaaagttaaaatttgcttatattaaaaaacggagg 1044062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Complemental strand, 32589417 - 32589347
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| |||||||||||||||| ||||||| |||  ||||||||||| |||||||||||||||||    
T  32589417 gttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaatgaatctaaaa 32589347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Complemental strand, 17005062 - 17004959
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata---ac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacg 1172  Q
    ||||||||||| |||||||||||||||||||||||||   ||  ||||||||||| |||||||||| ||||||    || ||| |||||||| |||||||    
T  17005062 gttcattcaattaatgatgtatgtggtctataatatatggaccacatacatcattaattgaatgaacctaaaaaatcaattttgcttatatttaaaaacg 17004963  T
Q  1173 gagg 1176  Q
    ||||    
T  17004962 gagg 17004959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1072 - 1176
Target Start/End: Complemental strand, 19679070 - 19678963
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaa 1168  Q
    |||| |||||||||||| |||||||||||| ||| ||  ||| |||  ||||||||||| |||||||||| |||||||  ||||||| |||||||| | |    
T  19679070 ttttaagttcattcaattaatgatgtatgtagtccatgttatgaaccacatacatcattaattgaatgaacctaaaaggtaaaatttgcttatatttaga 19678971  T
Q  1169 aacggagg 1176  Q
    ||||||||    
T  19678970 aacggagg 19678963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000004
Query Start/End: Original strand, 1078 - 1138
Target Start/End: Complemental strand, 39530497 - 39530434
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaa 1138  Q
    ||||||||||| |||||||||||||||||||||||| |||  ||||||||||| ||||||||||    
T  39530497 gttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaatgaa 39530434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1082 - 1145
Target Start/End: Original strand, 4181973 - 4182039
Alignment:
Q  1082 attcaatcaatgatgtatgtggtctataatata-acc--atacatcattgattgaatgaatctaaaa 1145  Q
    ||||||| ||||||||||||||||||||||||| | |  |||||||||||||||||| |||||||||    
T  4181973 attcaattaatgatgtatgtggtctataatatagatcatatacatcattgattgaataaatctaaaa 4182039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Complemental strand, 22995798 - 22995697
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||  ||| ||||| |   |||||||||| ||| |||||| ||||||   |||||||||||||||| | |||||||    
T  22995798 gttcattcaattaatgatgtatgtggttcatattataaaccacatacatcattaattaaatgaacctaaaaagtaaaatttacttatatttagaaacgga 22995699  T
Q  1175 gg 1176  Q
    ||    
T  22995698 gg 22995697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Complemental strand, 40326540 - 40326470
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| ||||||||||||||| |||||||| |||  ||||||||||| |||||||||||| ||||    
T  40326540 gttcattcaattaatgatgtatgtggtttataatatgaaccacatacatcattaattgaatgaatcaaaaa 40326470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1090 - 1177
Target Start/End: Original strand, 42595787 - 42595877
Alignment:
Q  1090 aatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagga 1177  Q
    ||||||||||||||| ||||||||  ||  ||||||||||| |||||||||||||||||   ||||||| ||||||||  |||||||||||    
T  42595787 aatgatgtatgtggtttataatatggaccacatacatcattaattgaatgaatctaaaaagtaaaatttgcttatattttaaaacggagga 42595877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1090 - 1176
Target Start/End: Complemental strand, 37331689 - 37331601
Alignment:
Q  1090 aatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||||||||||| ||||||||  ||  ||||||||||| | |||||||| ||||||||| ||||||||||||||| ||| |||||||    
T  37331689 aatgatgtatgtggtttataatatggaccacatacatcatttaatgaatgaacctaaaagtc-aaatttacttatatttaaagacggagg 37331601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Complemental strand, 44435276 - 44435187
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||||||||||||| ||| ||| |||||  ||||||||| |||||||||| ||||||   ||||||| ||||||||    
T  44435276 gttcattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaatgaacctaaaaaataaaatttgcttatatt 44435187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1043 - 1176
Target Start/End: Complemental strand, 54726199 - 54726056
Alignment:
Q  1043 tactccctccgttttttaacataagtaaattttgagtt-------cattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattg 1132  Q
    |||||||||||||||| || ||||| ||||||||| ||       |||| ||| |||||| |||||| | ||||||||| ||||  || || ||| ||||    
T  54726199 tactccctccgtttttaaatataagcaaattttgacttttagattcatttaattaatgatatatgtgatttataatatagaccacatatattattaattg 54726100  T
Q  1133 aatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||||| |||||| ||||||||| |||||||| |||||||||||    
T  54726099 aatgaacctaaaaatcaaaatttgcttatatttaaaaacggagg 54726056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1072 - 1145
Target Start/End: Original strand, 1086541 - 1086617
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatctaaaa 1145  Q
    |||| |||||||||||| ||||||||||||||| ||||  ||| ||||  ||||||||| |||||||||||||||||    
T  1086541 ttttaagttcattcaataaatgatgtatgtggtatatataatagaccatgtacatcatttattgaatgaatctaaaa 1086617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1078 - 1178
Target Start/End: Complemental strand, 7933620 - 7933517
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataac---catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| | ||||||||||| || ||| |||||    ||||||||||| ||||||| || ||||||   ||||||||||||||||  ||||||||    
T  7933620 gttcattcaattattgatgtatgtgatccatattataaatgacatacatcattaattgaataaacctaaaaaataaaatttacttatattttaaaacgga 7933521  T
Q  1175 ggaa 1178  Q
    ||||    
T  7933520 ggaa 7933517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1078 - 1178
Target Start/End: Original strand, 18480914 - 18481017
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||| ||| |||||||||||||||| ||| ||||| |   |||||||||| |||| || || ||||||   ||||||| |||||||| |||||||||    
T  18480914 gttcatttaattaatgatgtatgtggtccatattataaaccacatacatcattaattggataaacctaaaaagtaaaatttgcttatatttaaaaacgga 18481013  T
Q  1175 ggaa 1178  Q
    ||||    
T  18481014 ggaa 18481017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1117 - 1174
Target Start/End: Complemental strand, 43333979 - 43333922
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||| ||||||   |||||||||||||||| |||||||||    
T  43333979 catacatcattaattgaatgaacctaaaacgtaaaatttacttatatttaaaaacgga 43333922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1042 - 1176
Target Start/End: Complemental strand, 55198744 - 55198611
Alignment:
Q  1042 atactccctccgttttttaacataagtaaattttgagttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaa 1138  Q
    ||||||||||||||||| || ||||||||| || || || ||   || |||||||||||||||| ||| ||| |||  ||||||||||| | ||||||||    
T  55198744 atactccctccgtttttaaatataagtaaaatt-gactttat---attaatgatgtatgtggtccatattattaacaacatacatcattaaatgaatgaa 55198649  T
Q  1139 tct-aaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||| ||||||| || |||||||||||| |||||||||||    
T  55198648 tctaaaaagtc-aattttacttatatttaaaaacggagg 55198611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1081 - 1145
Target Start/End: Complemental strand, 12745000 - 12744933
Alignment:
Q  1081 cattcaatcaatgatgtatgtggtctataatata-accata--catcattgattgaatgaatctaaaa 1145  Q
    |||||| | ||||||||||||||||||||||| | ||||||  ||||||| |||||||||||||||||    
T  12745000 cattcattaaatgatgtatgtggtctataataaagaccatatacatcattaattgaatgaatctaaaa 12744933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Original strand, 16127786 - 16127856
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| |||||||||||||||| ||| |||||    ||||||||||| |||||||||| ||||||    
T  16127786 gttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaatgaacctaaaa 16127856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1072 - 1176
Target Start/End: Original strand, 21659170 - 21659277
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaa 1168  Q
    |||| |||||||||||| ||||||||||||| |  |||||||| ||||  || |||||| |||||||||| ||||||   ||||||||||| ||||  ||    
T  21659170 ttttaagttcattcaattaatgatgtatgtgattcataatatagaccacatatatcattaattgaatgaacctaaaaaggaaaatttacttttattttaa 21659269  T
Q  1169 aacggagg 1176  Q
    ||||||||    
T  21659270 aacggagg 21659277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1072 - 1164
Target Start/End: Original strand, 39289593 - 39289688
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    |||| |||||||||||| |||||||||||||||| ||| ||| |||||  ||||||||| ||| |||||| ||||||   |||||||| |||||||    
T  39289593 ttttaagttcattcaattaatgatgtatgtggtccatattataaaccatttacatcattaattaaatgaaactaaaaagtaaaatttaattatatt 39289688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1118 - 1174
Target Start/End: Complemental strand, 43898152 - 43898096
Alignment:
Q  1118 atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    |||||||||| |||||||||||||||||   ||||||| |||||||| |||||||||    
T  43898152 atacatcattaattgaatgaatctaaaaagtaaaatttgcttatatttaaaaacgga 43898096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1072 - 1176
Target Start/End: Complemental strand, 46739415 - 46739308
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatat-aacc--atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaa 1168  Q
    |||| |||||||||||| ||| ||||||||| |||||| ||| ||||  |||||||||| |||||||||| ||||||   ||||||| || ||||| | |    
T  46739415 ttttaagttcattcaattaataatgtatgtgatctatattatgaaccatatacatcattaattgaatgaacctaaaaagtaaaatttgctcatatttaga 46739316  T
Q  1169 aacggagg 1176  Q
    ||||||||    
T  46739315 aacggagg 46739308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1117 - 1161
Target Start/End: Original strand, 52638113 - 52638157
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttat 1161  Q
    ||||||||||| ||||||||||||||||||| ||||||| |||||    
T  52638113 catacatcattaattgaatgaatctaaaagttaaaatttgcttat 52638157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Complemental strand, 16127850 - 16127780
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| ||||||||||||||| ||||||||  ||  ||||||||||| |||||||||| ||||||    
T  16127850 gttcattcaattaatgatgtatgtggtttataatatggaccacatacatcattaattgaatgaacctaaaa 16127780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Complemental strand, 21659240 - 21659151
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||| ||||||||||||| ||| |    ||||||||||| ||||||||||  |||||   ||||||||||||||||    
T  21659240 gttcattcaattaatgatatatgtggtctatattatgaatcacatacatcattaattgaatgaacttaaaaagtaaaatttacttatatt 21659151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1090 - 1145
Target Start/End: Complemental strand, 26121629 - 26121571
Alignment:
Q  1090 aatgatgtatgtggtctataatata-accata--catcattgattgaatgaatctaaaa 1145  Q
    ||||||||||||||||||||||| | ||||||  ||||||| |||||||||||||||||    
T  26121629 aatgatgtatgtggtctataataaagaccatatacatcattaattgaatgaatctaaaa 26121571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1090 - 1145
Target Start/End: Complemental strand, 26244470 - 26244412
Alignment:
Q  1090 aatgatgtatgtggtctataatata-accata--catcattgattgaatgaatctaaaa 1145  Q
    ||||||||||||||||||||||| | ||||||  ||||||| |||||||||||||||||    
T  26244470 aatgatgtatgtggtctataataaagaccatatacatcattaattgaatgaatctaaaa 26244412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1090 - 1145
Target Start/End: Original strand, 27102157 - 27102215
Alignment:
Q  1090 aatgatgtatgtggtctataatat--aac-catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||||||||||||||||  ||| ||||||| ||| |||||||||||||||||    
T  27102157 aatgatgtatgtggtctataatatagaacacatacattatttattgaatgaatctaaaa 27102215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1082 - 1163
Target Start/End: Complemental strand, 4182029 - 4181944
Alignment:
Q  1082 attcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaa-aagtcaaaatttacttatat 1163  Q
    |||||||||||||||||| || |||||| |||| ||  ||||||||||| ||||||| ||||||| |||| ||||||| |||||||    
T  4182029 attcaatcaatgatgtatatgatctatattatagaccacatacatcattaattgaataaatctaacaagttaaaatttgcttatat 4181944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1079 - 1113
Target Start/End: Complemental strand, 17501506 - 17501472
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatat 1113  Q
    |||||||||| ||||||||||||||||||||||||    
T  17501506 ttcattcaattaatgatgtatgtggtctataatat 17501472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1117 - 1175
Target Start/End: Complemental strand, 32146524 - 32146466
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    ||||||||||| ||||||| ||| |||||   |||||||||||||||| ||||||||||    
T  32146524 catacatcattaattgaataaatttaaaaagtaaaatttacttatatttaaaaacggag 32146466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1117 - 1175
Target Start/End: Complemental strand, 34935598 - 34935540
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    ||||||||||| |||||||||| ||||||   ||||||| |||||||| ||||||||||    
T  34935598 catacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttaaaaacggag 34935540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1071 - 1112
Target Start/End: Original strand, 12047276 - 12047317
Alignment:
Q  1071 attttgagttcattcaatcaatgatgtatgtggtctataata 1112  Q
    ||||| |||||||||| | |||||||||||||||||||||||    
T  12047276 attttaagttcattcatttaatgatgtatgtggtctataata 12047317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 1e-26; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 1e-26
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Complemental strand, 17096545 - 17096444
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||||||||||||||||||| |||| |||| | ||  ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17096545 gttcattcaatcaatgatgtatgtggtttatattatagatcaaatacattattgattgaatgaatctaaaagtcaaaatttgcttatattaaaaaacgga 17096446  T
Q  1175 gg 1176  Q
    ||    
T  17096445 gg 17096444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 1042 - 1176
Target Start/End: Original strand, 17096438 - 17096582
Alignment:
Q  1042 atactccctccgttttttaacataagtaaattttgagtt-------cattcaatcaatgatgtatgtggtctataatataacc---atacatcattgatt 1131  Q
    |||||||||||||||||||| ||||| ||||||||| ||       |||||||||||| |||||| || |||||||||||| |   ||||||||||||||    
T  17096438 atactccctccgttttttaatataagcaaattttgacttttagattcattcaatcaataatgtatttgatctataatataaaccacatacatcattgatt 17096537  T
Q  1132 gaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||| |||||||| |||||||  |||||||||||||| ||||    
T  17096538 gaatgaacctaaaagttaaaatttgtttatattaaaaaacagagg 17096582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 2e-19
Query Start/End: Original strand, 1079 - 1176
Target Start/End: Original strand, 9004986 - 9005086
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatataac---catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    |||||| ||| |||||||||||| |||||||||||||    ||||||| ||| |||||||||| |||||||||||||||| |||||||| ||||||||||    
T  9004986 ttcatttaattaatgatgtatgtagtctataatataaatcacatacattattaattgaatgaacctaaaagtcaaaatttgcttatatttaaaaacggag 9005085  T
Q  1176 g 1176  Q
    |    
T  9005086 g 9005086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 1042 - 1165
Target Start/End: Complemental strand, 30778145 - 30778012
Alignment:
Q  1042 atactccctccgttttttaacataagtaaattttga-------gttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgatt 1131  Q
    |||||||||||||||||||| ||||| |||||||||       ||| |||||| |||||||||||||| | |||| ||||  |   |||||| ||| |||    
T  30778145 atactccctccgttttttaatataagcaaattttgacttttaggtttattcaaacaatgatgtatgtgatatatattatagactaaatacattattaatt 30778046  T
Q  1132 gaatgaatctaaaagtcaaaatttacttatatta 1165  Q
    ||||||||||||||||||||||||||||||||||    
T  30778045 gaatgaatctaaaagtcaaaatttacttatatta 30778012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1072 - 1178
Target Start/End: Complemental strand, 11773564 - 11773455
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaa 1168  Q
    |||| |||||||||||| ||| |||||||| ||||| |||||| ||||  ||||| ||| ||||||||||| |||||||| |||||| |||||||| |||    
T  11773564 ttttaagttcattcaattaataatgtatgttgtctaaaatatagaccacatacataattaattgaatgaatttaaaagtcgaaatttgcttatatttaaa 11773465  T
Q  1169 aacggaggaa 1178  Q
    ||||||||||    
T  11773464 aacggaggaa 11773455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1079 - 1176
Target Start/End: Original strand, 29807117 - 29807215
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatataac-catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||||||||| ||||||||||||||||||||||  | | ||||||| ||| |||||||||||||||||   ||||||| |||||||||| |||||||||    
T  29807117 ttcattcaattaatgatgtatgtggtctataatggaccacatacataattaattgaatgaatctaaaaagtaaaatttgcttatattaagaaacggagg 29807215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1079 - 1176
Target Start/End: Original strand, 30778039 - 30778139
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatataac---catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    |||||||||| ||| |||||| | ||||||||||||     |||||||||||| |||||| || |||||||||||||||| |||||||||||||||||||    
T  30778039 ttcattcaattaataatgtatttagtctataatatatatcacatacatcattgtttgaataaacctaaaagtcaaaatttgcttatattaaaaaacggag 30778138  T
Q  1176 g 1176  Q
    |    
T  30778139 g 30778139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Complemental strand, 15966058 - 15965969
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| ||||||||||||||| ||||||||| ||  ||||||||||| |||||||||| ||||||   ||||||||||||||||    
T  15966058 gttcattcaattaatgatgtatgtggtttataatatagaccacatacatcattaattgaatgaacctaaaaagtaaaatttacttatatt 15965969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1119 - 1176
Target Start/End: Complemental strand, 7164901 - 7164844
Alignment:
Q  1119 tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||| |||||||||||||| |||||| ||||||||| ||||||||||||||||||||    
T  7164901 tacataattgattgaatgaacctaaaaatcaaaatttgcttatattaaaaaacggagg 7164844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1040 - 1176
Target Start/End: Complemental strand, 9005094 - 9004948
Alignment:
Q  1040 taatactccctccgttttttaacataagtaaattttga-------gttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattga 1129  Q
    ||||||||||||||||||| || ||||| |||||||||       ||||||||||| ||| ||||||||| | |||| |||| ||  ||||||||||| |    
T  9005094 taatactccctccgtttttaaatataagcaaattttgacttttaggttcattcaattaataatgtatgtgatttatattatagactacatacatcattaa 9004995  T
Q  1130 ttgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    || ||||||||||||||| |||||||  ||||||| ||| |||||||    
T  9004994 ttaaatgaatctaaaagttaaaatttgtttatatttaaatacggagg 9004948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1078 - 1178
Target Start/End: Original strand, 15965994 - 15966097
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||||||| |||||    ||||||||||| |||||||||| ||||||   ||||||| ||||||||   |||||||    
T  15965994 gttcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatattttgaaacgga 15966093  T
Q  1175 ggaa 1178  Q
    ||||    
T  15966094 ggaa 15966097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1079 - 1171
Target Start/End: Complemental strand, 29807177 - 29807084
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatataac-catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaac 1171  Q
    |||||||||| ||| |||||||||||| || ||| | | ||||||||||| |||||||||||||||||   ||||||| |||||||||||||||    
T  29807177 ttcattcaattaattatgtatgtggtccattatagaccacatacatcattaattgaatgaatctaaaaagtaaaatttgcttatattaaaaaac 29807084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1072 - 1162
Target Start/End: Complemental strand, 10495319 - 10495225
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattgaatgaatct-aaaagtcaaaatttacttata 1162  Q
    |||| |||||||| ||| ||||||| ||||| |||||||||||| |   |||||||||| ||||||||||||| |||| ||||||||||||||||    
T  10495319 ttttaagttcattgaataaatgatgaatgtgatctataatataaaccacatacatcatttattgaatgaatctaaaaaatcaaaatttacttata 10495225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1079 - 1170
Target Start/End: Complemental strand, 14642117 - 14642023
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatataac---catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaa 1170  Q
    |||||||||| ||| |||||||||||||| ||||||||   ||||||||||| ||||||| || |||||| ||||||||| || ||||| |||||    
T  14642117 ttcattcaattaataatgtatgtggtctaaaatataacccacatacatcattaattgaataaacctaaaaatcaaaatttgctaatatttaaaaa 14642023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1078 - 1177
Target Start/End: Complemental strand, 15966745 - 15966643
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||| |||||||||    ||||||||||| |||||||||| ||||||    || |||||||||||| ||||| |||    
T  15966745 gttcattcaattaatgatgtatgtggtccataatataaaccacatacatcattaattgaatgaacctaaaaagttaattttacttatatttaaaaatgga 15966646  T
Q  1175 gga 1177  Q
    |||    
T  15966645 gga 15966643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1078 - 1173
Target Start/End: Original strand, 22565633 - 22565732
Alignment:
Q  1078 gttcattcaa-tcaatgatgtatgtggtctataatata-acc--atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgg 1173  Q
    |||||||||| | ||||||||||||||| ||||||||| |||  |||||||||| |||||||||| |||| |||||||||||  ||||||| ||||||||    
T  22565633 gttcattcaaattaatgatgtatgtggtttataatatagaccgcatacatcattaattgaatgaacctaatagtcaaaatttgtttatatttaaaaacgg 22565732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1072 - 1164
Target Start/End: Original strand, 27304769 - 27304864
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    |||| |||||||||||||||| |||||||| ||| ||| ||| |||||  ||||||||| |||||||||| |||||| | ||||||||||||||||    
T  27304769 ttttaagttcattcaatcaattatgtatgtagtccatattatgaaccacatacatcattaattgaatgaacctaaaaattaaaatttacttatatt 27304864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1125 - 1176
Target Start/End: Complemental strand, 20657313 - 20657262
Alignment:
Q  1125 attgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||||||||||||| |||||| |||||||||| |||||||||||||||||||    
T  20657313 attgattgaatgaacctaaaaatcaaaatttatttatattaaaaaacggagg 20657262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Complemental strand, 21152690 - 21152601
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataac---catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||||||||||||| ||| |||||    ||||||||||| |||||||||| ||||||   ||||||||||||||||    
T  21152690 gttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaatgaacctaaaaagtaaaatttacttatatt 21152601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Complemental strand, 21159825 - 21159736
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataac---catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||||||||||||| ||| |||||    ||||||||||| |||||||||| ||||||   ||||||||||||||||    
T  21159825 gttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaatgaacctaaaaagtaaaatttacttatatt 21159736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Complemental strand, 21163632 - 21163543
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataac---catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||||||||||||| ||| |||||    ||||||||||| |||||||||| ||||||   ||||||||||||||||    
T  21163632 gttcattcaattaatgatgtatgtggtccatattataaatcacatacatcattaattgaatgaacctaaaaagtaaaatttacttatatt 21163543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000006
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Complemental strand, 38860902 - 38860832
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| |||||||||||||||||||||||| |||  ||||||||||| |||||||||| ||||||    
T  38860902 gttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaatgaacctaaaa 38860832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1078 - 1175
Target Start/End: Original strand, 3161264 - 3161364
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| || ||||||||||||| ||| ||||| |   |||||||||| |||||||||| ||||||   ||||||| |||||||| |||||||||    
T  3161264 gttcattcaattaacgatgtatgtggtccatattataaaccatatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttaaaaacgga 3161363  T
Q  1175 g 1175  Q
    |    
T  3161364 g 3161364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1077 - 1174
Target Start/End: Original strand, 7336892 - 7336992
Alignment:
Q  1077 agttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgg 1173  Q
    |||||||||||| |||||||||||||||| ||| |||||    ||||||||||| |||||||||| ||||||   ||||||| |||||||| | ||||||    
T  7336892 agttcattcaattaatgatgtatgtggtccatattataaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttagaaacgg 7336991  T
Q  1174 a 1174  Q
    |    
T  7336992 a 7336992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1042 - 1178
Target Start/End: Original strand, 14064805 - 14064951
Alignment:
Q  1042 atactccctccgttttttaacataagtaaattttga-------gttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgatt 1131  Q
    ||||||||||||||||| || |||||||||||||         ||||||||||| |||||||||||||||| ||| ||| |    ||||||||||| |||    
T  14064805 atactccctccgtttttaaatataagtaaattttactttttaggttcattcaattaatgatgtatgtggtccatattatgaatcacatacatcattaatt 14064904  T
Q  1132 gaatgaatctaaaagtcaaaatttacttatattaaaaaacggaggaa 1178  Q
    ||||||||||||||   ||  ||| |||||||| |||||||||||||    
T  14064905 gaatgaatctaaaaagtaatttttgcttatatttaaaaacggaggaa 14064951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1072 - 1169
Target Start/End: Original strand, 37554379 - 37554479
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaa 1168  Q
    |||| |||||||||||| |||||||||||||||  |||||||||    ||||||| ||| |||||||||||||||||   ||||||| ||||||| ||||    
T  37554379 ttttaagttcattcaattaatgatgtatgtggttcataatataaactacatacattattaattgaatgaatctaaaaaataaaatttgcttatataaaaa 37554478  T
Q  1169 a 1169  Q
    |    
T  37554479 a 37554479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Complemental strand, 43585597 - 43585496
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||  ||||||| |||||  ||||||||| |||||||||| ||||||   |||||||  ||||||| |||||||||    
T  43585597 gttcattcaattaatgatgtatgtggttcataatatgaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgtttatatttaaaaacgga 43585498  T
Q  1175 gg 1176  Q
    ||    
T  43585497 gg 43585496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1079 - 1176
Target Start/End: Complemental strand, 14064911 - 14064811
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    |||||||||| ||||||||||||| |  |||||||  ||||  ||||||||| |||||||||| ||||||   |||||||||||||||| ||||||||||    
T  14064911 ttcattcaattaatgatgtatgtgattcataatatggaccacatacatcattaattgaatgaacctaaaaagtaaaatttacttatatttaaaaacggag 14064812  T
Q  1176 g 1176  Q
    |    
T  14064811 g 14064811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1079 - 1176
Target Start/End: Complemental strand, 14571109 - 14571009
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    |||||||||| |||||||||||||||  |||||||  ||  ||||||||||| |||||||||||||||||   ||||||| |||||||| | ||||||||    
T  14571109 ttcattcaattaatgatgtatgtggttcataatatggaccacatacatcattaattgaatgaatctaaaaaataaaatttgcttatatttagaaacggag 14571010  T
Q  1176 g 1176  Q
    |    
T  14571009 g 14571009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1079 - 1164
Target Start/End: Original strand, 14571047 - 14571134
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    |||||||||| |||||||||||||||| ||| ||| |||||  ||||||||| |||||||||||||||||   ||||||||||||||||    
T  14571047 ttcattcaattaatgatgtatgtggtccatattatgaaccacatacatcattaattgaatgaatctaaaa-aaaaaatttacttatatt 14571134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1080 - 1176
Target Start/End: Complemental strand, 35172530 - 35172431
Alignment:
Q  1080 tcattcaatcaatgatgtatgtggtctataatataac---catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||||| ||| |||||||||||||||| ||||     ||||||||||| ||||||||||  ||||| ||||||||| |||||| | |||||||||||    
T  35172530 tcattcaattaataatgtatgtggtctatattataggtcacatacatcattaattgaatgaacttaaaaatcaaaattttcttataattaaaaacggagg 35172431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 1072 - 1169
Target Start/End: Original strand, 37685002 - 37685102
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaa 1168  Q
    |||| |||||||||||| |||||||||||||||  |||||||| ||  ||||||| ||| |||||||||||||||||   ||||||| ||||||| ||||    
T  37685002 ttttaagttcattcaattaatgatgtatgtggttcataatatagactacatacattattaattgaatgaatctaaaaaataaaatttgcttatataaaaa 37685101  T
Q  1169 a 1169  Q
    |    
T  37685102 a 37685102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Complemental strand, 18942088 - 18942018
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aacc--atacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| |||||||||||||||||||| ||| ||||  |||||||||| |||||||||| ||||||    
T  18942088 gttcattcaattaatgatgtatgtggtctatattatgaaccatatacatcattaattgaatgaacctaaaa 18942018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1117 - 1176
Target Start/End: Complemental strand, 20362037 - 20361978
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||||||| |||||||||||||||||   ||||||| |||||||| |||||||||||    
T  20362037 catacatcattaattgaatgaatctaaaaagtaaaatttgcttatatttaaaaacggagg 20361978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1078 - 1171
Target Start/End: Complemental strand, 22565698 - 22565601
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattga-ttgaatgaatctaaaagtcaaaatttacttatattaaaaaac 1171  Q
    ||||||||||| ||||||||||| |||||||| |||||    ||||||||||| | ||||||||| |||||| |||||||||  ||||||| ||||||    
T  22565698 gttcattcaattaatgatgtatgcggtctatattataaaccacatacatcattaatttgaatgaacctaaaaatcaaaatttgtttatatttaaaaac 22565601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Complemental strand, 34186457 - 34186387
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| |||||||||||||||| ||||||| |||  ||||||||||| |||||||||| ||||||    
T  34186457 gttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaatgaacctaaaa 34186387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1072 - 1171
Target Start/End: Original strand, 35172462 - 35172564
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaa 1168  Q
    |||| |||||||||||| |||||||||||||  |||||||||| ||  ||||||| ||| |||||||||   ||||||||||||||| |||||| | |||    
T  35172462 ttttaagttcattcaattaatgatgtatgtgacctataatatagaccacatacattattaattgaatgatcataaaagtcaaaatttgcttatagttaaa 35172561  T
Q  1169 aac 1171  Q
    |||    
T  35172562 aac 35172564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Original strand, 21163568 - 21163657
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| ||||||||||||| | ||||||||  ||  ||||||||||| |||||||||| ||||||   ||||||||||||||||    
T  21163568 gttcattcaattaatgatgtatgtgatttataatatggaccacatacatcattaattgaatgaacctaaaaagtaaaatttacttatatt 21163657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1079 - 1145
Target Start/End: Complemental strand, 36964331 - 36964262
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    |||||||||| | |||||||||||||||||||||| |||  ||||||||||| |||||||||| ||||||    
T  36964331 ttcattcaattagtgatgtatgtggtctataatatgaaccacatacatcattaattgaatgaacctaaaa 36964262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1072 - 1145
Target Start/End: Complemental strand, 6638372 - 6638296
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatat-aacc--atacatcattgattgaatgaatctaaaa 1145  Q
    |||| |||||||||||| |||||| ||||||||| ||||||| ||||  |||||||||| |||||||||| ||||||    
T  6638372 ttttaagttcattcaattaatgatatatgtggtcaataatatgaaccgtatacatcattaattgaatgaacctaaaa 6638296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1078 - 1178
Target Start/End: Original strand, 15966681 - 15966784
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatct-aaaagtcaaaatttacttatattaaaaaacgg 1173  Q
    ||||||||||| ||||||||||||||| |||| |||  ||  ||||||||||| |||||||||| || ||||||| || |||| ||||||| ||||||||    
T  15966681 gttcattcaattaatgatgtatgtggtttatattatggaccacatacatcattaattgaatgaacctaaaaagtc-aattttatttatatttaaaaacgg 15966779  T
Q  1174 aggaa 1178  Q
    |||||    
T  15966780 aggaa 15966784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1090 - 1175
Target Start/End: Original strand, 24433585 - 24433673
Alignment:
Q  1090 aatgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    |||||||||||||||| ||| ||| |||||  ||||||||| |||||||||| ||||||   ||||||||||||||||  |||||||||    
T  24433585 aatgatgtatgtggtccatattatgaaccacatacatcattaattgaatgaacctaaaaaataaaatttacttatattttaaaacggag 24433673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1078 - 1175
Target Start/End: Complemental strand, 43176353 - 43176253
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aacc--atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||| | |||||||||| ||||||||||||| ||||  |||||||||| | |||||||| ||||||    || |||||||||||||||| |||||    
T  43176353 gttcattcatttaatgatgtatctggtctataatatgaaccatatacatcattaaatgaatgaacctaaaaaatcaattttacttatattaaaatacgga 43176254  T
Q  1175 g 1175  Q
    |    
T  43176253 g 43176253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1081 - 1145
Target Start/End: Original strand, 2673888 - 2673955
Alignment:
Q  1081 cattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaa 1145  Q
    |||||||| ||||||||||||||||||||||||| ||  ||| ||||||| ||||||| |||||||||    
T  2673888 cattcaataaatgatgtatgtggtctataatatagactacatgcatcatttattgaataaatctaaaa 2673955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1078 - 1174
Target Start/End: Complemental strand, 14416508 - 14416409
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||| ||| ||||||||||||| | ||||||||  ||  ||||||||||| |||||||||||||||||   ||||||| ||||||||  ||||||||    
T  14416508 gttcatttaattaatgatgtatgtgatttataatatggaccacatacatcattaattgaatgaatctaaaaaataaaatttgcttatattttaaaacgga 14416409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1078 - 1178
Target Start/End: Complemental strand, 26168290 - 26168187
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| ||||||||||||||| ||||||||  ||  |||||||||||  ||||||| | ||||||   ||||||| ||||||||  ||||||||    
T  26168290 gttcattcaattaatgatgtatgtggtttataatatggaccacatacatcattagttgaatgtacctaaaaagtaaaatttgcttatatttcaaaacgga 26168191  T
Q  1175 ggaa 1178  Q
    ||||    
T  26168190 ggaa 26168187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1078 - 1174
Target Start/End: Original strand, 36964268 - 36964367
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||  ||| |||| ||  ||||||||| | |||||||||||| |||| |  || |||||||||||| |||||||||    
T  36964268 gttcattcaattaatgatgtatgtggttcatattatagaccacatacatcactaattgaatgaatcaaaaaattcaattttacttatatttaaaaacgga 36964367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1117 - 1173
Target Start/End: Original strand, 39785141 - 39785197
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgg 1173  Q
    ||||||||||| ||||||||||| ||||| | |||||||| ||||| ||||||||||    
T  39785141 catacatcatttattgaatgaatttaaaaattaaaatttatttataataaaaaacgg 39785197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1079 - 1162
Target Start/End: Complemental strand, 42247653 - 42247566
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatct-aaaagtcaaaatttacttata 1162  Q
    ||||| |||| |||||||||||||| |||||||||| ||||  ||||||||| ||||||||||  | |||||||||||||| ||||||    
T  42247653 ttcatccaataaatgatgtatgtggcctataatatagaccacgtacatcatttattgaatgaacataaaaagtcaaaatttgcttata 42247566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1078 - 1174
Target Start/End: Original strand, 43585533 - 43585632
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||  ||| ||| |||  ||||||||||| |||||||||| ||||||   ||| ||| |||||||| |||||||||    
T  43585533 gttcattcaattaatgatgtatgtggttcatattatgaaccacatacatcattaattgaatgaacctaaaaagtaaattttgcttatatttaaaaacgga 43585632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Original strand, 13420472 - 13420573
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| ||| ||||||||| || ||||||||| |   |||||||||| ||| |||||| ||||||    |||||| |||||||| |||||||||    
T  13420472 gttcattcaattaataatgtatgtgatccataatataaaccatatacatcattaattaaatgaacctaaaaaatcaaatttgcttatatttaaaaacgga 13420571  T
Q  1175 gg 1176  Q
    ||    
T  13420572 gg 13420573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1117 - 1164
Target Start/End: Original strand, 14642096 - 14642143
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||| ||| ||||||||||||||||| ||||||||| ||||||||    
T  14642096 catacattattaattgaatgaatctaaaattcaaaatttgcttatatt 14642143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1117 - 1176
Target Start/End: Complemental strand, 16985385 - 16985326
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||| |||||| ||| |||||| |||||||||||||||| |||||| |||||||| ||||    
T  16985385 catagatcattaattaaatgaacctaaaagtcaaaatttgcttataataaaaaacagagg 16985326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Original strand, 18753649 - 18753719
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||| | |||||||||||||||||||||||| |||  ||||||||||| | |||||||| ||||||    
T  18753649 gttcattcatttaatgatgtatgtggtctataatatgaaccacatacatcattaaatgaatgaacctaaaa 18753719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Complemental strand, 24089144 - 24089074
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| ||||||| ||||||||||||||||  ||  ||||||||||| |||||||||| ||||||    
T  24089144 gttcattcaataaatgatgaatgtggtctataatatggaccacatacatcatttattgaatgaacctaaaa 24089074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1119 - 1178
Target Start/End: Original strand, 36792717 - 36792776
Alignment:
Q  1119 tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggaggaa 1178  Q
    |||||| || |||||||||||||||||   ||||||||||||||||  ||||||||||||    
T  36792717 tacatcgttaattgaatgaatctaaaaagtaaaatttacttatattttaaaacggaggaa 36792776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1078 - 1172
Target Start/End: Original strand, 1723281 - 1723378
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aacc--atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacg 1172  Q
    ||||||| ||| ||||||||||||||| |||| ||| ||||  ||| |||||| |||||||||| ||||||   ||||||| |||||||| |||||||    
T  1723281 gttcatttaattaatgatgtatgtggtttatattatgaaccatatatatcattaattgaatgaacctaaaaagtaaaatttgcttatatttaaaaacg 1723378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1079 - 1145
Target Start/End: Complemental strand, 11795837 - 11795768
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-accata--catcattgattgaatgaatctaaaa 1145  Q
    |||||||| | |||||| |||||||||||||||| | ||||||  ||||||| |||||||||||||||||    
T  11795837 ttcattcattaaatgatatatgtggtctataataaagaccatatacatcattaattgaatgaatctaaaa 11795768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1078 - 1175
Target Start/End: Complemental strand, 12165386 - 12165285
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatct-aaaagtcaaaatttacttatattaaaaaacgg 1173  Q
    ||||||||||| |||||||||| || | |||| |||| ||||  ||||||||| ||| ||||||||| |||||||||||||| |||||| | || |||||    
T  12165386 gttcattcaattaatgatgtatatgatttatattatataccacatacatcattaattaaatgaatctaaaaagtcaaaatttgcttataattaacaacgg 12165287  T
Q  1174 ag 1175  Q
    ||    
T  12165286 ag 12165285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1079 - 1145
Target Start/End: Complemental strand, 14303128 - 14303062
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatataaccatacatcattgattgaatgaatctaaaa 1145  Q
    |||||||||| ||| |||||||| ||||||||||||| ||||||| ||| ||| ||| |||| ||||    
T  14303128 ttcattcaataaataatgtatgttgtctataatataaacatacattatttattcaataaatcaaaaa 14303062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Original strand, 18942024 - 18942113
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||||||| ||||  |||||||| ||||  ||||||||| |||||||||| ||||||   ||||||| ||||||||    
T  18942024 gttcattcaattaatgatgtatatggttcataatatagaccacatacatcattaattgaatgaacctaaaaaataaaatttgcttatatt 18942113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Original strand, 21152626 - 21152715
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| ||||||||||||| | ||||||||  ||  ||||||||||| |||||||||| ||||||   |||||| |||||||||    
T  21152626 gttcattcaattaatgatgtatgtgatttataatatggaccacatacatcattaattgaatgaacctaaaaagtaaaattgacttatatt 21152715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Original strand, 21159761 - 21159850
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| ||||||||||||| | ||||||||  ||  ||||||||||| |||||||||| ||||||   |||||| |||||||||    
T  21159761 gttcattcaattaatgatgtatgtgatttataatatggaccacatacatcattaattgaatgaacctaaaaagtaaaattgacttatatt 21159850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1079 - 1145
Target Start/End: Original strand, 25408582 - 25408651
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaa 1145  Q
    |||||||||| |||||||||||| ||||| |||| | ||  ||||||||||| |||||||||||||||||    
T  25408582 ttcattcaataaatgatgtatgttgtctacaataaagaccacatacatcatttattgaatgaatctaaaa 25408651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Original strand, 34102113 - 34102214
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||| ||| |||||||||||| ||| ||| ||| |||||  ||||||||| ||||||||||||||||||  ||| |||  ||||||| | |||||||    
T  34102113 gttcattgaattaatgatgtatgtagtccatattatgaaccacatacatcattaattgaatgaatctaaaaggtaaattttgtttatatttagaaacgga 34102212  T
Q  1175 gg 1176  Q
    ||    
T  34102213 gg 34102214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Original strand, 35067957 - 35068058
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aaccat--acatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||| ||||||| ||| ||||||  |||||||| |||| ||||| ||||||   |||||||  ||||||| |||||| ||    
T  35067957 gttcattcaattaatgatgtatgtagtctatattatgaaccatacacatcattaattggatgaacctaaaaagtaaaatttgtttatatttaaaaacaga 35068056  T
Q  1175 gg 1176  Q
    ||    
T  35068057 gg 35068058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1072 - 1174
Target Start/End: Complemental strand, 36346903 - 36346792
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatat-aacc--------atacatcattgattgaatgaatctaaaagtcaaaatttacttata 1162  Q
    |||| |||||||||||| ||||||||||||||| ||||||||  |||        |||||||||| |||||||||| ||||||   ||||||||||||||    
T  36346903 ttttaagttcattcaattaatgatgtatgtggtttataatatggaccacatacatatacatcattaattgaatgaacctaaaaagtaaaatttacttata 36346804  T
Q  1163 ttaaaaaacgga 1174  Q
    ||  ||||||||    
T  36346803 ttttaaaacgga 36346792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1122 - 1175
Target Start/End: Original strand, 12442850 - 12442903
Alignment:
Q  1122 atcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    |||||| ||||||||||||||||| ||||||||   ||||| ||||||||||||    
T  12442850 atcattaattgaatgaatctaaaaatcaaaattagtttataataaaaaacggag 12442903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1072 - 1113
Target Start/End: Original strand, 34820657 - 34820698
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatat 1113  Q
    |||| |||||||||| | ||||||||||||||||||||||||    
T  34820657 ttttaagttcattcatttaatgatgtatgtggtctataatat 34820698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1072 - 1145
Target Start/End: Complemental strand, 36329188 - 36329112
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    |||| |||||||||||| |||||||||||||||  ||||||| |||  |||| |||||| |||||||||| ||||||    
T  36329188 ttttaagttcattcaattaatgatgtatgtggtacataatatgaaccacatatatcattaattgaatgaacctaaaa 36329112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1078 - 1174
Target Start/End: Original strand, 43340453 - 43340552
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||| ||| |||||    |||| || ||| |||||||||| ||||||   ||||||| ||||||||  ||||||||    
T  43340453 gttcattcaattaatgatgtatgtggtccatattataaaccacataaattattaattgaatgaacctaaaaagtaaaatttgcttatattttaaaacgga 43340552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 2e-22; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-22
Query Start/End: Original strand, 1042 - 1176
Target Start/End: Complemental strand, 2033314 - 2033170
Alignment:
Q  1042 atactccctccgttttttaacataagtaaattttga-------gttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgatt 1131  Q
    |||||||||||||||||||| ||||| |||||||||       ||||||||||| |||||||||| ||| |||||||||| ||  || |||||||| |||    
T  2033314 atactccctccgttttttaatataagcaaattttgactttcaagttcattcaattaatgatgtatttggcctataatatataccacaaacatcattaatt 2033215  T
Q  1132 gaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||| |||||||| ||||||| ||||||||| ||||||||||    
T  2033214 gaatgaacctaaaagttaaaatttgcttatattagaaaacggagg 2033170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 1118 - 1178
Target Start/End: Original strand, 18685198 - 18685258
Alignment:
Q  1118 atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggaggaa 1178  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18685198 atacattattgattgaatgaatctaaaaatcaaaatttacttatattaaaaaacggaggaa 18685258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 1043 - 1176
Target Start/End: Original strand, 5301913 - 5302060
Alignment:
Q  1043 tactccctccgttttttaacataagtaaattttga-------gttcattcaatcaatgatgtatgtggtctataatataac---catacatcattgatt- 1131  Q
    |||||||||||||||| || |||||||||||||||       ||||||||||| ||| || ||||||||||||| |||||    |||| |||||| |||     
T  5301913 tactccctccgtttttaaatataagtaaattttgatttttaggttcattcaattaataatatatgtggtctatattataaatcacatatatcattaatta 5302012  T
Q  1132 ---gaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
       ||||||||||||||||||||||||||||||||| |||||| ||||    
T  5302013 attgaatgaatctaaaagtcaaaatttacttatatttaaaaacagagg 5302060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 1042 - 1176
Target Start/End: Original strand, 2033164 - 2033308
Alignment:
Q  1042 atactccctccgttttttaacataagtaaattttga-------gttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgatt 1131  Q
    |||||||||||||||| ||| ||||| ||||||| |       ||||||||||| |||||||| |||||| |||| ||||  |   |||||||||| |||    
T  2033164 atactccctccgttttctaatataagcaaattttaacttttaggttcattcaattaatgatgtttgtggtatatattataggccaaatacatcattaatt 2033263  T
Q  1132 gaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||||||  | ||||||||||||| ||||||||||||||||||||    
T  2033264 gaatgaacttgaaagtcaaaatttgcttatattaaaaaacggagg 2033308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Complemental strand, 21478655 - 21478585
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| |||||||||||||||||||||||| |||  ||||||||||| |||||||||||||||||    
T  21478655 gttcattcaattaatgatgtatgtggtctataatatgaaccacatacatcattaattgaatgaatctaaaa 21478585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.00000000000001
Query Start/End: Original strand, 1078 - 1175
Target Start/End: Complemental strand, 3212343 - 3212243
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataac---catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    |||| |||||| |||||||||||||||| |||||||||    ||||||||||| |||||||||| |||||| |  || |||||||||||| |||||||||    
T  3212343 gttcgttcaattaatgatgtatgtggtccataatataaatcacatacatcattaattgaatgaacctaaaaattcaattttacttatatttaaaaacgga 3212244  T
Q  1175 g 1175  Q
    |    
T  3212243 g 3212243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Original strand, 9908174 - 9908263
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatct-aaaagtcaaaatttacttatatt 1164  Q
    |||||||||||||||||||||||||||| ||||||| |    ||||||||||| |||||||||| || ||||||| |||||||||||||||    
T  9908174 gttcattcaatcaatgatgtatgtggtccataatatgaatcacatacatcattaattgaatgaacctaaaaagtc-aaatttacttatatt 9908263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.0000000000002
Query Start/End: Original strand, 1079 - 1176
Target Start/End: Complemental strand, 27082474 - 27082381
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatataaccatacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||||||||| ||| ||||||||||| |||| ||    ||||||||||| ||||||||||| ||||||||||||||| |||||| | || ||||||||    
T  27082474 ttcattcaattaataatgtatgtggtatatatta----catacatcattaattgaatgaatttaaaagtcaaaatttgcttataattaagaacggagg 27082381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1072 - 1174
Target Start/End: Complemental strand, 7418983 - 7418878
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaa 1168  Q
    |||| |||||||| ||| |||||||||||||||||||| ||| |||||  ||||||||| |||||||||| ||||||   ||||||| |||||||| | |    
T  7418983 ttttaagttcattaaattaatgatgtatgtggtctatattatgaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatttaga 7418884  T
Q  1169 aacgga 1174  Q
    ||||||    
T  7418883 aacgga 7418878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Complemental strand, 32786218 - 32786129
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||||||||||||| ||||||| |||  ||||||||||| |||||||||| ||||||   ||||||| ||||||||    
T  32786218 gttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatt 32786129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1129 - 1176
Target Start/End: Complemental strand, 5301965 - 5301918
Alignment:
Q  1129 attgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||||||||| |||||| |||||||||||||||||| |||||||||||    
T  5301965 attgaatgaacctaaaaatcaaaatttacttatatttaaaaacggagg 5301918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1079 - 1176
Target Start/End: Original strand, 14804204 - 14804302
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatat-aaccatacatcattgattgaatgaatctaa-aagtcaaaatttacttatattaaaaaacggagg 1176  Q
    |||||||||| ||||||||||||||| ||||||||  || |||||||||| ||||||||||  ||| |||| ||||||| ||||||||  ||||||||||    
T  14804204 ttcattcaattaatgatgtatgtggtttataatatggactatacatcattaattgaatgaacgtaagaagt-aaaatttgcttatattttaaaacggagg 14804302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Complemental strand, 667830 - 667729
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||| ||||||| |||  ||||||||||| || ||||||| ||||||    || ||| |||||||| |||||||||    
T  667830 gttcattcaattaatgatgtatgtggtccataatatgaactacatacatcattaatggaatgaacctaaaaaatcaattttgcttatatttaaaaacgga 667731  T
Q  1175 gg 1176  Q
    ||    
T  667730 gg 667729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1078 - 1174
Target Start/End: Original strand, 3343815 - 3343914
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatct-aaaagtcaaaatttacttatattaaaaaacgg 1173  Q
    ||||||||||| |||||||||||||||| ||||||| |||  ||||||||| | |||||||||| || ||||||| || |||||||||||| | ||||||    
T  3343815 gttcattcaattaatgatgtatgtggtccataatatgaaccacatacatcaataattgaatgaacctaaaaagtc-aattttacttatatttagaaacgg 3343913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Original strand, 5433369 - 5433470
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatct-aaaagtcaaaatttacttatattaaaaaacgg 1173  Q
    ||||||||||| |||||||||||||||| | ||||| |||  ||||||||||| ||||||||||  | ||||||| |||||| |||||| | ||||||||    
T  5433369 gttcattcaattaatgatgtatgtggtccacaatatgaaccgcatacatcattaattgaatgaacataaaaagtc-aaatttgcttataattaaaaacgg 5433467  T
Q  1174 agg 1176  Q
    |||    
T  5433468 agg 5433470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Original strand, 8145987 - 8146057
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||| | ||||||||||||||||||||||| | ||||  ||||||||| | |||||||||||||||    
T  8145987 gttcattcatttaatgatgtatgtggtctataataaagaccatgtacatcattaaatgaatgaatctaaaa 8146057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Original strand, 10731511 - 10731600
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||| | ||||||||||||| |||||| ||||| |   |||||||||| |||||||||| ||||||   ||||||| ||||||||    
T  10731511 gttcattcatttaatgatgtatgtgatctatattataaaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatt 10731600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1072 - 1135
Target Start/End: Complemental strand, 31759432 - 31759366
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaat 1135  Q
    |||| |||||||||||| |||||||||||||||| ||||||| |||  ||||||||||| |||||||    
T  31759432 ttttaagttcattcaattaatgatgtatgtggtccataatatgaaccgcatacatcattaattgaat 31759366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1080 - 1145
Target Start/End: Original strand, 3012400 - 3012468
Alignment:
Q  1080 tcattcaatcaatgatgtatgtggtctataatata---accatacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||| ||||||||||||||||| || | ||   | ||||||||||| |||||||||||||||||    
T  3012400 tcattcaataaatgatgtatgtggtctttattgtaaacaacatacatcatttattgaatgaatctaaaa 3012468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1079 - 1145
Target Start/End: Original strand, 6047995 - 6048064
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatat-aacca--tacatcattgattgaatgaatctaaaa 1145  Q
    |||||||||| |||||||||||||  | ||||||| |||||  ||||||||| |||||||||||||||||    
T  6047995 ttcattcaattaatgatgtatgtgacccataatatgaaccacatacatcattaattgaatgaatctaaaa 6048064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Complemental strand, 11989244 - 11989159
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataaccatacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||| |||||||||||||||  |||| |  | ||||||||||| |||||||||| ||||||   ||||||| ||||||||    
T  11989244 gttcattcaattaatgatgtatgtggttcataagacca-catacatcattaattgaatgaacctaaaaagtaaaatttgcttatatt 11989159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1079 - 1145
Target Start/End: Complemental strand, 14173491 - 14173422
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaa 1145  Q
    |||||||||| |||||||||||||||| ||| |||| ||  ||||| ||||| |||||||||||||||||    
T  14173491 ttcattcaataaatgatgtatgtggtcaatattatagactacatacttcatttattgaatgaatctaaaa 14173422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1079 - 1145
Target Start/End: Complemental strand, 14178027 - 14177958
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaa 1145  Q
    |||||||||| |||||||||||||||| ||| |||| ||  ||||| ||||| |||||||||||||||||    
T  14178027 ttcattcaataaatgatgtatgtggtcaatattatagactacatacttcatttattgaatgaatctaaaa 14177958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1078 - 1183
Target Start/End: Original strand, 7418913 - 7419021
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||  |||||||| ||  ||||||||||| ||| ||||||  |||||   ||||||| |||||||| | | |||||    
T  7418913 gttcattcaattaatgatgtatgtggttcataatatagaccacatacatcattaatttaatgaacttaaaaaataaaatttgcttatatttagatacgga 7419012  T
Q  1175 ggaattaca 1183  Q
    |||| ||||    
T  7419013 ggaagtaca 7419021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1079 - 1175
Target Start/End: Original strand, 15467612 - 15467711
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatataac---catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggag 1175  Q
    |||||| ||| | ||||||||||| |||||| |||||    ||||||||||| ||||||||||||| |||   ||| |||||||||| | ||||||||||    
T  15467612 ttcatttaattattgatgtatgtgatctatattataaatcacatacatcattaattgaatgaatctgaaaaataaattttacttataattaaaaacggag 15467711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 46; Significance: 2e-16; HSPs: 2)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 46; E-Value: 2e-16
Query Start/End: Original strand, 1072 - 1176
Target Start/End: Original strand, 5420 - 5527
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaa 1168  Q
    |||| |||||||||||| |||||||||||||||||||| |||||    ||||||||||| ||| |||||||||||||   ||||||| |||||||| | |    
T  5420 ttttaagttcattcaattaatgatgtatgtggtctatattataaaccacatacatcattaattaaatgaatctaaaatgtaaaattttcttatatttaga 5519  T
Q  1169 aacggagg 1176  Q
    ||||||||    
T  5520 aacggagg 5527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635; HSP #2
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1079 - 1164
Target Start/End: Complemental strand, 5489 - 5401
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    |||||| ||| ||||||||||||||| ||||||||| ||  ||||||||||| ||||||||||  |||||   |||||||| |||||||    
T  5489 ttcatttaattaatgatgtatgtggtttataatatagaccacatacatcattaattgaatgaacttaaaaagtaaaatttatttatatt 5401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 42; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 1072 - 1145
Target Start/End: Original strand, 58332 - 58408
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    |||| ||||||||||||||||||||||||||||| ||||||| |||  ||||||||||| |||||||||| ||||||    
T  58332 ttttaagttcattcaatcaatgatgtatgtggtccataatatgaaccacatacatcattaattgaatgaacctaaaa 58408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 39; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Complemental strand, 38109 - 38008
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| |||||||||||||||||||| ||| |||  |||||||||||  ||||||||| |||| |   ||||||| |||||||| |||||||||    
T  38109 gttcattcaattaatgatgtatgtggtctatattatgaaccacatacatcattagttgaatgaacctaacaaataaaatttgcttatatttaaaaacgga 38010  T
Q  1175 gg 1176  Q
    ||    
T  38009 gg 38008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1117 - 1176
Target Start/End: Original strand, 38397 - 38456
Alignment:
Q  1117 catacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacggagg 1176  Q
    ||||||||||| ||||||||||| ||||||| ||| ||| ||||||||||||||| ||||    
T  38397 catacatcattaattgaatgaatttaaaagttaaattttgcttatattaaaaaacagagg 38456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #3
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1078 - 1164
Target Start/End: Original strand, 38045 - 38134
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-acca--tacatcattgattgaatgaatctaaaagtcaaaatttacttatatt 1164  Q
    ||||||||||  |||||||||||||||  |||||||| ||||  ||||||||| |||||||||| ||||||   ||||||| ||||||||    
T  38045 gttcattcaactaatgatgtatgtggttcataatatagaccacatacatcattaattgaatgaacctaaaaagtaaaatttgcttatatt 38134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 36; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Complemental strand, 11686 - 11616
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| ||||||||||||||||||||||||  ||  ||||||||||| |||||||||| ||||||    
T  11686 gttcattcaattaatgatgtatgtggtctataatatggaccacatacatcattaattgaatgaacctaaaa 11616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172; HSP #2
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Original strand, 11622 - 11692
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-ac--catacatcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| |||||||||||||||| ||| |||| ||  ||||||||||| |||||||||| ||||||    
T  11622 gttcattcaattaatgatgtatgtggtccatattatagaccacatacatcattaattgaatgaacctaaaa 11692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 35; Significance: 0.0000000006; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 35; E-Value: 0.0000000006
Query Start/End: Original strand, 1079 - 1145
Target Start/End: Complemental strand, 231 - 162
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    |||||||||| |||||||||||||||||||||||| |||  ||||||| ||| ||| |||||||||||||    
T  231 ttcattcaataaatgatgtatgtggtctataatatgaaccacatacataatttattaaatgaatctaaaa 162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1072 - 1175
Target Start/End: Original strand, 17466 - 17572
Alignment:
Q  1072 ttttgagttcattcaatcaatgatgtatgtggtctataatataa---ccatacatcattgattgaatgaatct-aaaagtcaaaatttacttatattaaa 1167  Q
    |||| |||||||||| | |||||||||||||||||||| |||||    ||||||||||| | |||||||| || ||||||| || ||| |||||||| ||    
T  17466 ttttaagttcattcatttaatgatgtatgtggtctatattataaaccacatacatcattaaatgaatgaacctaaaaagtc-aattttgcttatatttaa 17564  T
Q  1168 aaacggag 1175  Q
    ||||||||    
T  17565 aaacggag 17572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 33; Significance: 0.000000009; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 33; E-Value: 0.000000009
Query Start/End: Original strand, 1118 - 1162
Target Start/End: Original strand, 108045 - 108089
Alignment:
Q  1118 atacatcattgattgaatgaatctaaaagtcaaaatttacttata 1162  Q
    |||||||||| ||||||||||| ||||||||||||||| ||||||    
T  108045 atacatcattaattgaatgaatttaaaagtcaaaatttgcttata 108089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1786 (Bit Score: 32; Significance: 0.00000004; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1176
Target Start/End: Complemental strand, 612 - 511
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatataacc---atacatcattgattgaatgaatctaaaagtcaaaatttacttatattaaaaaacgga 1174  Q
    ||||||||||| ||||||||||||| || ||| ||||| |   |||||||| | ||| |||||||||||||   ||||||| |||||| | |||||||||    
T  612 gttcattcaattaatgatgtatgtgatcaatattataaaccacatacatcaataattaaatgaatctaaaaagtaaaatttgcttataattaaaaacgga 513  T
Q  1175 gg 1176  Q
    ||    
T  512 gg 511  T

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Target: scaffold0340 (Bit Score: 32; Significance: 0.00000004; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 32; E-Value: 0.00000004
Query Start/End: Original strand, 1078 - 1145
Target Start/End: Complemental strand, 14135 - 14065
Alignment:
Q  1078 gttcattcaatcaatgatgtatgtggtctataatata-accata--catcattgattgaatgaatctaaaa 1145  Q
    ||||||||||| |||||| ||||| || ||||||||| ||||||  ||||||| |||||||||||||||||    
T  14135 gttcattcaattaatgatctatgtagtttataatatagaccatatacatcattaattgaatgaatctaaaa 14065  T

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Target: scaffold0263 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1079 - 1145
Target Start/End: Original strand, 19832 - 19901
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatat-aac--catacatcattgattgaatgaatctaaaa 1145  Q
    |||||| ||| |||||||||||||||||||||||| |||  ||||||| ||| ||| |||||||||||||    
T  19832 ttcattaaataaatgatgtatgtggtctataatatgaaccacatacataatttattaaatgaatctaaaa 19901  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1079 - 1145
Target Start/End: Original strand, 146007 - 146076
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatata-accata--catcattgattgaatgaatctaaaa 1145  Q
    |||||||| | |||||||||||||||||| |||| | ||||||  ||||||| |||||||||||||||||    
T  146007 ttcattcattaaatgatgtatgtggtctaaaataaagaccatatacatcattaattgaatgaatctaaaa 146076  T

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Target: scaffold0236 (Bit Score: 30; Significance: 0.0000006; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.0000006
Query Start/End: Original strand, 1079 - 1145
Target Start/End: Original strand, 13734 - 13802
Alignment:
Q  1079 ttcattcaatcaatgatgtatgtggtctataatataac--catacatcattgattgaatgaatctaaaa 1145  Q
    |||||||||| |||||||||||||||| ||| ||| ||  ||||||||||| | ||||||||| |||||    
T  13734 ttcattcaattaatgatgtatgtggtccatattatgaccacatacatcattaaatgaatgaatttaaaa 13802  T

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