View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8937_low_44 (Length: 254)
Name: NF8937_low_44
Description: NF8937
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8937_low_44 |
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Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 51720142 - 51720380
Alignment:
| Q |
1 |
aaggcttccctcactctcccaaccaattctttccccacatttattcaccctcaaaacatatcaacatcacttacttcagctccattcaattctcaatttt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51720142 |
aaggcttccctcactctcccaaccaattctttccccacatttattcaccctcaaaacatatcaacatcacttacttcagctccattcaattctcaatttt |
51720241 |
T |
|
| Q |
101 |
ttggactcaagctatctcattcttccatttccaaaaccacttcttctccaccttcttcattcaaaagaggtttcatttttgccaaggtactttattcaca |
200 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51720242 |
ttggcctcaagctatctcattcttccatttccaaaaccacttcttctccaccttcttcattcaaaagaggtttcatttttgccaaggtactttattcaca |
51720341 |
T |
|
| Q |
201 |
atatacaagttgctacaatatatcagcattactgtttgt |
239 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
51720342 |
atatacaagttgctacaatatatcagcattactgtttgt |
51720380 |
T |
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