View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8939_low_1 (Length: 1088)

Name: NF8939_low_1
Description: NF8939
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8939_low_1
NF8939_low_1
[»] chr2 (29 HSPs)
chr2 (33-1077)||(17771514-17772559)
chr2 (1-89)||(10812179-10812267)
chr2 (1-89)||(34357158-34357246)
chr2 (1-76)||(479148-479223)
chr2 (1-91)||(14541309-14541399)
chr2 (1-89)||(15677466-15677554)
chr2 (1-90)||(14295932-14296021)
chr2 (1-74)||(30264777-30264850)
chr2 (1-89)||(11222491-11222579)
chr2 (1-89)||(26342560-26342648)
chr2 (1-77)||(38148210-38148285)
chr2 (1-59)||(6212410-6212468)
chr2 (1-91)||(10562463-10562553)
chr2 (1-71)||(11560222-11560292)
chr2 (1-91)||(14288409-14288499)
chr2 (1-83)||(28145747-28145829)
chr2 (1-91)||(36405017-36405107)
chr2 (1-83)||(37077156-37077238)
chr2 (1-83)||(37660130-37660212)
chr2 (1-30)||(4883642-4883671)
chr2 (1-30)||(4952863-4952892)
chr2 (1-74)||(14284123-14284196)
chr2 (1-74)||(15183176-15183249)
chr2 (1-30)||(15893755-15893784)
chr2 (1-74)||(25558359-25558431)
chr2 (1-74)||(30544515-30544588)
chr2 (1-74)||(36375566-36375639)
chr2 (1-30)||(38186227-38186256)
chr2 (1-74)||(43077287-43077360)
[»] chr4 (39 HSPs)
chr4 (127-254)||(52219159-52219286)
chr4 (1-92)||(38617480-38617571)
chr4 (1-91)||(56576276-56576366)
chr4 (1-89)||(3436240-3436328)
chr4 (1-89)||(36408706-36408794)
chr4 (1-89)||(36422872-36422960)
chr4 (1-89)||(42513199-42513287)
chr4 (1-89)||(44069014-44069102)
chr4 (1-89)||(50623397-50623485)
chr4 (1-91)||(44217687-44217777)
chr4 (1-82)||(39683887-39683968)
chr4 (1-89)||(12252083-12252171)
chr4 (1-89)||(53599959-53600047)
chr4 (7-74)||(47596792-47596859)
chr4 (1-91)||(9220214-9220304)
chr4 (1-91)||(19527381-19527471)
chr4 (1-91)||(32239381-32239471)
chr4 (1-74)||(26620524-26620597)
chr4 (1-74)||(27492357-27492430)
chr4 (1-74)||(29295352-29295425)
chr4 (1-53)||(8735408-8735460)
chr4 (1-89)||(13629366-13629454)
chr4 (1-89)||(31862159-31862247)
chr4 (1-36)||(51978803-51978838)
chr4 (1-83)||(23623668-23623750)
chr4 (1-91)||(34603605-34603695)
chr4 (1-43)||(35381588-35381630)
chr4 (5-91)||(41414989-41415074)
chr4 (1-91)||(47428510-47428600)
chr4 (1-91)||(52677318-52677408)
chr4 (1-74)||(353964-354037)
chr4 (1-66)||(6128972-6129037)
chr4 (1-74)||(8741797-8741870)
chr4 (1-74)||(16464955-16465028)
chr4 (1-90)||(16664223-16664312)
chr4 (1-74)||(21044920-21044993)
chr4 (1-74)||(30939153-30939226)
chr4 (1-74)||(33755255-33755328)
chr4 (1-86)||(35231676-35231761)
[»] chr8 (19 HSPs)
chr8 (1-91)||(13327757-13327847)
chr8 (1-83)||(9954635-9954717)
chr8 (1-74)||(11993888-11993961)
chr8 (1-89)||(23429889-23429977)
chr8 (1-74)||(167649-167722)
chr8 (1-90)||(14061321-14061410)
chr8 (1-89)||(14263524-14263612)
chr8 (1-89)||(25703749-25703837)
chr8 (1-89)||(25812920-25813008)
chr8 (1-89)||(34046831-34046919)
chr8 (1-89)||(40604023-40604111)
chr8 (1-36)||(1245345-1245380)
chr8 (1-83)||(23848728-23848810)
chr8 (1-91)||(27518879-27518969)
chr8 (1-74)||(35028603-35028674)
chr8 (1-31)||(38238955-38238985)
chr8 (1-90)||(3720659-3720748)
chr8 (3-48)||(23793449-23793494)
chr8 (1-74)||(41890517-41890590)
[»] chr5 (23 HSPs)
chr5 (1-91)||(38910234-38910324)
chr5 (1-89)||(1297907-1297995)
chr5 (1-89)||(10359404-10359492)
chr5 (5-89)||(425091-425175)
chr5 (1-89)||(4175649-4175737)
chr5 (1-77)||(34261286-34261362)
chr5 (1-83)||(10889263-10889345)
chr5 (1-83)||(21157601-21157683)
chr5 (1-91)||(28024428-28024518)
chr5 (5-74)||(12723132-12723201)
chr5 (5-74)||(12784615-12784684)
chr5 (1-74)||(18794760-18794833)
chr5 (1-89)||(7579837-7579925)
chr5 (1-89)||(39073006-39073094)
chr5 (1-83)||(21150460-21150542)
chr5 (5-91)||(28463558-28463644)
chr5 (1-51)||(31802788-31802838)
chr5 (1-74)||(6007860-6007933)
chr5 (1-66)||(9076056-9076121)
chr5 (1-74)||(12664835-12664908)
chr5 (1-74)||(18465678-18465751)
chr5 (1-74)||(38363168-38363241)
chr5 (1-74)||(42911527-42911600)
[»] chr3 (16 HSPs)
chr3 (1-91)||(34266616-34266706)
chr3 (1-93)||(54106239-54106331)
chr3 (1-89)||(790530-790618)
chr3 (1-89)||(48214047-48214135)
chr3 (1-88)||(48151966-48152053)
chr3 (1-83)||(20105178-20105260)
chr3 (1-83)||(23771273-23771355)
chr3 (1-91)||(54898264-54898354)
chr3 (1-74)||(29803630-29803703)
chr3 (1-74)||(43554385-43554458)
chr3 (1-89)||(52663422-52663510)
chr3 (1-89)||(53745459-53745547)
chr3 (1-52)||(3035591-3035642)
chr3 (1-90)||(36234346-36234435)
chr3 (1-90)||(47104333-47104422)
chr3 (1-74)||(51244619-51244692)
[»] chr1 (21 HSPs)
chr1 (1-83)||(19093254-19093336)
chr1 (1-89)||(35531464-35531552)
chr1 (1-89)||(28679001-28679089)
chr1 (1-89)||(37609470-37609558)
chr1 (1-89)||(49908351-49908439)
chr1 (1-91)||(21927865-21927955)
chr1 (1-83)||(32347964-32348046)
chr1 (1-90)||(10675881-10675970)
chr1 (1-90)||(37735308-37735397)
chr1 (1-90)||(44182739-44182828)
chr1 (2-74)||(7782946-7783018)
chr1 (1-89)||(8464618-8464706)
chr1 (5-89)||(15660567-15660651)
chr1 (1-89)||(31588908-31588996)
chr1 (1-89)||(32168481-32168569)
chr1 (1-85)||(44818438-44818522)
chr1 (3-74)||(45368083-45368154)
chr1 (1-83)||(45226746-45226828)
chr1 (1-74)||(30686406-30686479)
chr1 (1-74)||(35255481-35255554)
chr1 (1-74)||(38648452-38648525)
[»] chr7 (22 HSPs)
chr7 (1-89)||(8966075-8966163)
chr7 (1-89)||(12838253-12838341)
chr7 (1-74)||(31399106-31399179)
chr7 (1-89)||(17896698-17896786)
chr7 (1-89)||(33100008-33100096)
chr7 (1-89)||(35112409-35112497)
chr7 (1-74)||(22950993-22951066)
chr7 (1-74)||(33257876-33257949)
chr7 (1-89)||(18194389-18194477)
chr7 (1-89)||(31430539-31430627)
chr7 (1-89)||(32528503-32528591)
chr7 (1-89)||(41675361-41675449)
chr7 (1-72)||(29497709-29497780)
chr7 (3-89)||(13431308-13431394)
chr7 (1-83)||(24283568-24283650)
chr7 (1-83)||(46392612-46392694)
chr7 (1-74)||(2408836-2408909)
chr7 (1-90)||(18470286-18470375)
chr7 (1-74)||(20035043-20035116)
chr7 (1-74)||(20045454-20045527)
chr7 (1-90)||(32966224-32966313)
chr7 (1-74)||(35746819-35746892)
[»] chr6 (11 HSPs)
chr6 (1-65)||(847800-847864)
chr6 (1-89)||(3849045-3849133)
chr6 (5-89)||(31854668-31854752)
chr6 (1-91)||(26470896-26470986)
chr6 (1-74)||(364716-364789)
chr6 (1-66)||(879267-879332)
chr6 (1-89)||(17193138-17193226)
chr6 (5-91)||(24635686-24635772)
chr6 (1-74)||(3621585-3621658)
chr6 (1-30)||(21887758-21887787)
chr6 (1-90)||(31244922-31245011)
[»] scaffold0172 (1 HSPs)
scaffold0172 (1-74)||(26300-26373)
[»] scaffold0280 (1 HSPs)
scaffold0280 (1-71)||(8152-8222)
[»] scaffold0135 (1 HSPs)
scaffold0135 (1-91)||(30865-30955)
[»] scaffold0325 (1 HSPs)
scaffold0325 (1-74)||(310-383)
[»] scaffold0040 (1 HSPs)
scaffold0040 (1-74)||(69095-69168)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-74)||(49142-49215)


Alignment Details
Target: chr2 (Bit Score: 986; Significance: 0; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 986; E-Value: 0
Query Start/End: Original strand, 33 - 1077
Target Start/End: Complemental strand, 17772559 - 17771514
Alignment:
Q  33 taaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaatctataggaaggaatgtgaggtatacctgacttcccccatgt 132  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17772559 taaaaagaaacgaattttttcagcaaaagtgacagttaaaaaagagcgaagagagtaatctataggaaggaatgtgaggtatacctgacttcccccatgt 17772460  T
Q  133 ccatcatagacaccaaaaaagtgtgctagggaatcttttgtgttttcattcacatggtcatccattagcatcattgaaggtacttgaaaaagttgaggtt 232  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17772459 ccatcatagacaccaaaaaagtgtgctagggaatcttttgtgttttcattcacatggtcatccattagcatcattgaaggtacttgaaaaagttgaggtt 17772360  T
Q  233 taataacaatagtatcttccatttcttgtctccttccaataactgacgagaaaccgtaaagaggagtattactcaattccaaaccattatcacagcttgt 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17772359 taataacaatagtatcttccatttcttgtctccttccaataactgacgagaaaccgtaaagaggagtattactcaattccaaaccattatcacagcttgt 17772260  T
Q  333 ttgctgctctggcatctcatgaaccgctgcaatcggttttgattcaggaccatctgagatacttctatcttcattctcatgtttcataccaacagaagcc 432  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17772259 ttgctgctctggcatctcatgaaccgctgcaatcggttttgattcaggaccatctgagatacttctatcttcattctcatgtttcataccaacagaagcc 17772160  T
Q  433 atgttcgtcactggctcattcaaaccatacttatcatcctcgatattatcatcaaccgtgacagtattcggtgtgttcatttcagacaaattagtcctcg 532  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  17772159 atgttcgtcactggctcattcaaaccatacttatcatcctcgatattatcatcaaccgtgacagtattcggtgtgttcatttcagacaaattagtccttg 17772060  T
Q  533 aaattgctgactcccccgtaaaaggactgctttttctactaacagaagattgagaggatggattatgtatacactgaaaatccttagctgtcttgaactc 632  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17772059 aaattgtagactcccccgtaaaaggactgctttttctactaacagaagattgagaggatggattatgtatacactgaaaatccttagctgtcttgaactc 17771960  T
Q  633 ctcatcatttctttcaaaactgtcactttcaagaaccatttctgagacaggttcagctgcaacttgatcctccttaacctctagagacactgatatttgt 732  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17771959 ctcatcatttctttcaaaactgtcactttcaagaaccatttctgagacaggttcagctgcaacttgatcctccttaacctctagagacactgatatttgt 17771860  T
Q  733 tgatgttgtagactaatatccgcgtcgccgtcttcaacacttccaacagaaaaagactgacaaccctcaattgaagcaggatttaatattaaaactgatg 832  Q
    ||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17771859 tgatgttgaggactaatatccgcgtcgccgtcttcaccacttccaacagaaaaagactgacaaccctcaattgaagcaggatttaatattaaaactgatg 17771760  T
Q  833 atgtatttgtcataagatttaaaccagttatttccatgtgatttgtcactgttgactctttttgtattaaattcccaattaaaaatggcactgcaaccgt 932  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17771759 atgtatttatcataagatttaaaccagttatttccatgtgatttgtcactgttgactctttttgtattaaattcccaattgaaaatggcactgcaaccgt 17771660  T
Q  933 cgaacttatttcctccataagttttcttttctttctaaaaatatccttatcctctaaaatcctataatttttaaccttccttaagactcttctttagtaa 1032  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17771659 cgaacttatttcctccataagttttcttttctttctaaaaatatccttatcctctaaaatcctataatttttaaccttccttaatactcttctttagtaa 17771560  T
Q  1033 catttttc-ttagtaacacttcaatttttgttacataaacaccaaa 1077  Q
    || ||||| |||||||||||||||||||||||||||||||||||||    
T  17771559 cacttttctttagtaacacttcaatttttgttacataaacaccaaa 17771514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 10812267 - 10812179
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||||||||  ||||||||||| ||||||| || ||||| |||||    
T  10812267 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggagggagta 10812179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 34357246 - 34357158
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||| |||||| |||| || ||| || ||||||  ||||||||||| ||||||| || ||||| |||||    
T  34357246 ttaatgttgcattgaactttgaaagtgacaattaaataggaacaaattttttctccaaaagtgacacttaaaaaggaacggagggagta 34357158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 479148 - 479223
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaag 76  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||||||||  ||||||||||| |||||||||    
T  479148 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaag 479223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 14541399 - 14541309
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaat 91  Q
    |||||||||||||||||||||||| |||||  ||||  ||||| | |||||||  ||||||||||| ||||||| || ||||| |||||||    
T  14541399 ttaatgttgcattgaactttgaaagtgacagttaaattgaaacaatatttttctccaaaagtgacatttaaaaaggaacggagggagtaat 14541309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 15677466 - 15677554
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||||||||  ||||| ||||| |||||||| | ||||| |||||    
T  15677466 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaaatgacacttaaaaaataacggagggagta 15677554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 14295932 - 14296021
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaa 90  Q
    ||||||||| |||||||||||||| |||||  |||| || ||| ||| |||||  ||||||||||| ||||||| || ||||| ||||||    
T  14295932 ttaatgttgtattgaactttgaaagtgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggagggagtaa 14296021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 30264777 - 30264850
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    ||||||||| ||||||||||||||||||||  |||| |  ||| |||||||||  ||||||||||| |||||||    
T  30264777 ttaatgttgtattgaactttgaaaatgacagttaaataagaacaaaatttttctccaaaagtgacacttaaaaa 30264850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 11222491 - 11222579
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||| |||||  |||| |||||| |||  ||||  |||||| |||| ||||||| || ||||| |||||    
T  11222491 ttaatgttgcattgaactttgaaagtgacagttaaatagaaacaaaaaatttcttcaaaagagacacttaaaaaggaacggagggagta 11222579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 26342648 - 26342560
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||  ||||  ||||||||||| ||||||| || ||||| |||||    
T  26342648 ttaatgttgcattgaactttgaaagtgacagttaaataggaaccaaaaatttctccaaaagtgacacttaaaaaggaacggagggagta 26342560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 38148210 - 38148285
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaaga 77  Q
    ||||||||| |||||||||||||| |||||  |||  |||||| ||||||||  |||||||||||| ||||||||||    
T  38148210 ttaatgttgtattgaactttgaaagtgacagttaattagaaac-aaatttttttgcaaaagtgacaattaaaaaaga 38148285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 6212410 - 6212468
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaa 59  Q
    ||||||||||||||||||||||||| || |||||||  |||||||  |||||| |||||    
T  6212410 ttaatgttgcattgaactttgaaaacgataagtaaattgaaacgatttttttctgcaaa 6212468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 10562463 - 10562553
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaat 91  Q
    ||||||||| ||||||| ||||||| ||||| |||| |||||| |||| ||||   |||| ||||||||||||| ||  |||| |||||||    
T  10562463 ttaatgttgtattgaacattgaaaacgacaaataaatagaaacaaaatatttccaaaaaaatgacagttaaaaaggaaaggagggagtaat 10562553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 11560222 - 11560292
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaa 71  Q
    |||||||||||||||||||||||| |||||  |||| |||||| ||| |||||  ||||| ||||| ||||    
T  11560222 ttaatgttgcattgaactttgaaagtgacagttaaatagaaacaaaaattttctccaaaactgacacttaa 11560292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 14288499 - 14288409
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaat 91  Q
    ||||||||  ||||||||||||||||||||  |||| || ||| ||| |||||  ||||||||||| |||||||  | ||||| |||||||    
T  14288499 ttaatgttatattgaactttgaaaatgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaagaaacggagggagtaat 14288409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 28145747 - 28145829
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggag 83  Q
    |||||||||||||||||||||||| |||||  |||| || ||  ||| |||||  ||||||||||| ||||||| || |||||    
T  28145747 ttaatgttgcattgaactttgaaagtgacagttaaataggaagaaaaattttctccaaaagtgacacttaaaaaggaacggag 28145829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 36405017 - 36405107
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaat 91  Q
    ||||| |||||||||||||||||| |||||  |||| |||||| ||| |||||  |||||| |||| ||||||| || ||||  |||||||    
T  36405017 ttaatattgcattgaactttgaaagtgacagttaaatagaaacaaaaattttcttcaaaagagacacttaaaaatgaacggaaggagtaat 36405107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 37077238 - 37077156
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggag 83  Q
    ||||||||| ||||||||||||||||||||  |||| | |||| |||  ||||  ||||||||||| ||||||| || |||||    
T  37077238 ttaatgttgtattgaactttgaaaatgacacttaaataaaaacaaaaaatttcttcaaaagtgacaattaaaaatgaacggag 37077156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 37660212 - 37660130
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggag 83  Q
    ||||||||| |||||||||||||| |||||  |||  |||||| |||  |||| |||||||||||| ||||||| || |||||    
T  37660212 ttaatgttgtattgaactttgaaagtgacagttaattagaaacaaaaaatttctgcaaaagtgacaattaaaaatgaacggag 37660130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 4883671 - 4883642
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgaca 30  Q
    ||||||||||||||||||||||||||||||    
T  4883671 ttaatgttgcattgaactttgaaaatgaca 4883642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 4952863 - 4952892
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgaca 30  Q
    ||||||||||||||||||||||||||||||    
T  4952863 ttaatgttgcattgaactttgaaaatgaca 4952892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 14284196 - 14284123
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| |||||| |||| || ||  |||  ||||  ||||||||||| |||||||    
T  14284196 ttaatgttgcattgaactttgaaagtgacaactaaacaggaataaaaaatttcttcaaaagtgacacttaaaaa 14284123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 15183176 - 15183249
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    ||||||||||||||||||| |||| |||||| |||| |||||| |||  ||||   |||||||||| |||||||    
T  15183176 ttaatgttgcattgaacttcgaaagtgacaattaaatagaaacaaaaaatttctcaaaaagtgacacttaaaaa 15183249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 15893755 - 15893784
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgaca 30  Q
    ||||||||||||||||||||||||||||||    
T  15893755 ttaatgttgcattgaactttgaaaatgaca 15893784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 25558359 - 25558431
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    ||||||||||||| |||||||||| |||||  |||| |||||| ||| |||||  ||||||||||| |||||||    
T  25558359 ttaatgttgcatt-aactttgaaagtgacagttaaatagaaacaaaaattttctccaaaagtgacacttaaaaa 25558431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 30544588 - 30544515
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| |||||  |||  |||||| |||  |||  |||||||||||| |||||||    
T  30544588 ttaatgttgcattgaactttgaaagtgacagttaattagaaacaaaaaatttatgcaaaagtgacaattaaaaa 30544515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 36375639 - 36375566
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| |||||   ||| || ||| |||||||||  ||||| ||||| |||||||    
T  36375639 ttaatgttgcattgaactttgaaagtgacagtcaaataggaacaaaatttttctccaaaaatgacacttaaaaa 36375566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 38186227 - 38186256
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgaca 30  Q
    ||||||||||||||||||||||||||||||    
T  38186227 ttaatgttgcattgaactttgaaaatgaca 38186256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 43077360 - 43077287
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||  ||||  ||||||||||| |||||||    
T  43077360 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaaatttcttcaaaagtgacaattaaaaa 43077287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 1e-22; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 127 - 254
Target Start/End: Original strand, 52219159 - 52219286
Alignment:
Q  127 ccatgtccatcatagacaccaaaaaagtgtgctagggaatcttttgtgttttcattcacatggtcatccattagcatcattgaaggtacttgaaaaagtt 226  Q
    ||||| |||||||||||||||||||| || ||| | |  | ||||||||||||||||| |||||||||||||||||||  |||||| ||||||||||  |    
T  52219159 ccatgcccatcatagacaccaaaaaaatgggcttgtgggtattttgtgttttcattcaaatggtcatccattagcatctgtgaagggacttgaaaaaact 52219258  T
Q  227 gaggtttaataacaatagtatcttccat 254  Q
    ||||||| | | |||||| |||||||||    
T  52219259 gaggtttgacagcaatagcatcttccat 52219286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 38617480 - 38617571
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaatc 92  Q
    ||||||||||||||||||||||||||||||  |||| || ||| |||| ||||  ||||||||||| ||||||| || ||||| ||||||||    
T  38617480 ttaatgttgcattgaactttgaaaatgacagttaaataggaacaaaatatttctccaaaagtgacacttaaaaaggaacggagggagtaatc 38617571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 56576276 - 56576366
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaat 91  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||||||||  ||||||||||| ||||||| || ||||| |||||||    
T  56576276 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggagggagtaat 56576366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 3436240 - 3436328
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||||||||  ||||||||||| ||||||| || ||||| |||||    
T  3436240 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggagggagta 3436328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 36408794 - 36408706
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||||| |||| |||| || ||| ||| |||||  ||||||||||| ||||||| || ||||| |||||    
T  36408794 ttaatgttgcattgaactttgaaaattacaattaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggagggagta 36408706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 36422960 - 36422872
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||||| |||| |||| || ||| ||| |||||  ||||||||||| ||||||| || ||||| |||||    
T  36422960 ttaatgttgcattgaactttgaaaattacaattaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggagggagta 36422872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 42513199 - 42513287
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||||||||  ||||||||||| ||||||| || |||| ||||||    
T  42513199 ttaatgttgcattgaactttgaaagtgacacttaaatagtaacaaaatttttctccaaaagtgacacttaaaaaggaacggaaagagta 42513287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 44069102 - 44069014
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||||||||  ||||||||||| ||||||| || ||||| |||||    
T  44069102 ttaatgttgcattgaactttgaaagtgacacttaaataggaacaaaatttttctacaaaagtgacacttaaaaaggaacggagggagta 44069014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 50623485 - 50623397
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||| |||||| |||| |||||| || ||||||  | ||||||||| ||||||| || ||||| |||||    
T  50623485 ttaatgttgcattgaactttgaaagtgacaattaaatagaaacaaattttttctcctaaagtgacacttaaaaaggaacggagggagta 50623397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 44217777 - 44217687
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaat 91  Q
    ||||||||||||||||||| |||| |||||  |||| |||||| |||  ||||  ||||||||||| ||||||| || |||||||||||||    
T  44217777 ttaatgttgcattgaacttcgaaagtgacagttaaatagaaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagagagtaat 44217687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 39683887 - 39683968
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcgga 82  Q
    |||||||||||||||||||| ||| |||||  |||| |||||| |||||||||  ||||| ||||| |||||||||| ||||    
T  39683887 ttaatgttgcattgaactttaaaagtgacagttaaatagaaacaaaatttttctacaaaaatgacacttaaaaaagaacgga 39683968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 12252171 - 12252083
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||| |||||  |||| || ||| ||| |||||  ||||||||||| ||||||| || ||||| |||||    
T  12252171 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaattttcttcaaaagtgacacttaaaaaggaacggagggagta 12252083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 53599959 - 53600047
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||||||||  ||||| ||||| ||||||| || ||||| |||||    
T  53599959 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaaatgacacttaaaaaggaacggagggagta 53600047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 47596792 - 47596859
Alignment:
Q  7 ttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    ||||||||||||||||||||||||| |||| |||||| ||| |||||  |||||| |||| |||||||    
T  47596792 ttgcattgaactttgaaaatgacaattaaatagaaacaaaaattttctacaaaagagacacttaaaaa 47596859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 9220214 - 9220304
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaat 91  Q
    |||||||| ||||||||||||||| |||||  |||  || ||| || ||||||   ||||||||||||||||||||| ||||| |||||||    
T  9220214 ttaatgttacattgaactttgaaagtgacagttaattaggaacaaattttttctctaaaagtgacagttaaaaaagaacggagggagtaat 9220304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 19527381 - 19527471
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaat 91  Q
    |||||||||||||||||||||||| |||||  |||| || ||| ||| |||||  ||||||||||| |||||||  | ||||| |||||||    
T  19527381 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaagaaacggagggagtaat 19527471  T

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Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 32239471 - 32239381
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaat 91  Q
    |||||||||||||||||||| ||| |||||  |||| |  ||| |||||||||  ||||||||||| ||||||| || ||||| |||||||    
T  32239471 ttaatgttgcattgaactttaaaagtgacagttaaatatgaacaaaatttttctccaaaagtgacatttaaaaaggaacggagggagtaat 32239381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 26620524 - 26620597
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||||||||  |||| |||||| |||||||    
T  26620524 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaatgtgacacttaaaaa 26620597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 27492430 - 27492357
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| |||||  |||| || ||| ||| |||||  ||||||||||| |||||||    
T  27492430 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaa 27492357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29295425 - 29295352
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| | |||  |||| || ||| |||||||||  ||||||||||| |||||||    
T  29295425 ttaatgttgcattgaactttgaaagtcacagttaaataggaacaaaatttttctccaaaagtgacacttaaaaa 29295352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8735460 - 8735408
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttc 53  Q
    ||||| |||||||||||||||||| |||||| |||| |||||| |||||||||    
T  8735460 ttaatattgcattgaactttgaaagtgacaattaaatagaaacaaaatttttc 8735408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 13629366 - 13629454
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||  ||||  ||||||||||| ||||||| || ||||| |||||    
T  13629366 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaaatttctacaaaagtgacacttaaaaaggaacggagggagta 13629454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 31862159 - 31862247
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||| |||||  |||| || ||| ||| |||||  |||||| |||| ||||||| || ||||| |||||    
T  31862159 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaattttctccaaaagagacacttaaaaaggaacggagggagta 31862247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 51978803 - 51978838
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaa 36  Q
    ||||||||||||||||||||||||||||||| ||||    
T  51978803 ttaatgttgcattgaactttgaaaatgacaaataaa 51978838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 23623668 - 23623750
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggag 83  Q
    |||||||||||||||||||||||| |||||  |||| || ||| ||| |||||   |||||||||| ||||||| || |||||    
T  23623668 ttaatgttgcattgaactttgaaagtgacagttaaatagtaacaaaaattttctcaaaaagtgacacttaaaaaggaacggag 23623750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 34603695 - 34603605
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaat 91  Q
    |||||||| ||||||||||||||| |||||  |||  |||||| |||  |||| | |||||||||||||| ||| || ||||| |||||||    
T  34603695 ttaatgttacattgaactttgaaagtgacagttaattagaaacaaaaaatttctgtaaaagtgacagttataaaggaacggagggagtaat 34603605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 35381588 - 35381630
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaac 43  Q
    |||||||||||||||||||||||| |||||| |||| ||||||    
T  35381588 ttaatgttgcattgaactttgaaagtgacaattaaatagaaac 35381630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 41415074 - 41414989
Alignment:
Q  5 tgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaat 91  Q
    |||||||||||||||||||| |||||| |||| |||||| |||  ||||  ||||| ||||| |||||||  | |||||||||||||    
T  41415074 tgttgcattgaactttgaaagtgacaattaaatagaaac-aaaaatttcttcaaaaatgacacttaaaaagaaacggagagagtaat 41414989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 47428600 - 47428510
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaat 91  Q
    ||||||||||||||||||||||||  ||||  |||| || ||| |||||||||  ||||||||||| ||| ||| ||  |||| |||||||    
T  47428600 ttaatgttgcattgaactttgaaagcgacagttaaataggaacaaaatttttctccaaaagtgacacttataaaggaatggagggagtaat 47428510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 52677318 - 52677408
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaat 91  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||  ||||   |||||||||| ||||||| || ||||| |||||||    
T  52677318 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaaatttctctaaaagtgacacttaaaaaggaacggagggagtaat 52677408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 354037 - 353964
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| |||||| |||| || ||| |||  ||||  |||||| |||| |||||||    
T  354037 ttaatgttgcattgaactttgaaagtgacaattaaataggaacaaaaaatttcttcaaaagagacacttaaaaa 353964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 6129037 - 6128972
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgaca 66  Q
    ||||||||||||||||  |||||| |||||||||||| ||||| ||||| |||  |||||| ||||    
T  6129037 ttaatgttgcattgaaacttgaaagtgacaagtaaaatgaaacaaaattattcttcaaaagcgaca 6128972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8741797 - 8741870
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    ||||||||| ||||||||||||||||||||  |||| |  ||| |||||||||  ||||| ||||| |||||||    
T  8741797 ttaatgttgtattgaactttgaaaatgacagttaaatatgaaccaaatttttcttcaaaattgacacttaaaaa 8741870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 16464955 - 16465028
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||  ||||  ||||||||||| |||||||    
T  16464955 ttaatgttgcattgaactttgaaagtgacagttaaatagtaacaaaaaatttcttcaaaagtgacacttaaaaa 16465028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 16664312 - 16664223
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaa 90  Q
    |||||||||||||||||||||||| ||||   |||| ||  || |||| ||||  ||||||||||| ||||||| || ||||| ||||||    
T  16664312 ttaatgttgcattgaactttgaaagtgaccgttaaatagggacaaaatatttctccaaaagtgacacttaaaaaggaacggagggagtaa 16664223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 21044920 - 21044993
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| |||||  |||| || ||| ||| |||||   |||||||||| |||||||    
T  21044920 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaattttctcaaaaagtgacacttaaaaa 21044993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 30939226 - 30939153
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| |||||  |||| |||||| |||  ||||   |||||||||| |||||||    
T  30939226 ttaatgttgcattgaactttgaaagtgacagttaaatagaaacaaaaaatttctctaaaagtgacaattaaaaa 30939153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 33755255 - 33755328
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| |||||  |||| |||||  ||| |||||   |||||||||| |||||||    
T  33755255 ttaatgttgcattgaactttgaaagtgacagttaaagagaaataaaaattttctctaaaagtgacacttaaaaa 33755328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 35231761 - 35231676
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagaga 86  Q
    |||||||||||||||||||||||| ||||   |||| | |||  |||||||||  ||||| ||| | |||||||||| ||||||||    
T  35231761 ttaatgttgcattgaactttgaaagtgacggttaaataaaaataaaatttttctccaaaaatgatacttaaaaaagaacggagaga 35231676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 13327847 - 13327757
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaat 91  Q
    |||||||||||||||||||||||| |||||  |||| |||||| |||||||||  ||||||||||| ||||||| || ||||  |||||||    
T  13327847 ttaatgttgcattgaactttgaaagtgacagttaaatagaaacaaaatttttctccaaaagtgacacttaaaaaggaacggatggagtaat 13327757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 9954717 - 9954635
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggag 83  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||||||||  ||||||||||| ||||||| || |||||    
T  9954717 ttaatgttgcattgaactttgaaagtgacagttaaataggaactaaatttttctccaaaagtgacacttaaaaaggaacggag 9954635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 11993961 - 11993888
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    ||||||||||||| |||||||||| |||||  |||| |||||| |||||||||  ||||||||||| |||||||    
T  11993961 ttaatgttgcattaaactttgaaagtgacagttaaatagaaacaaaatttttctccaaaagtgacacttaaaaa 11993888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 23429977 - 23429889
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||| |||||  |||| || ||| ||| |||||  ||||||||||| ||||||| || ||||| |||||    
T  23429977 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggagggagta 23429889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 167649 - 167722
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| |||||  ||||   |||| |||||||||  ||||||||||| |||||||    
T  167649 ttaatgttgcattgaactttgaaagtgacagttaaattaaaacaaaatttttctccaaaagtgacacttaaaaa 167722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 14061321 - 14061410
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaa 90  Q
    ||||||||||||||| |||||||| |||||  |||| |||||| ||||||||    |||| ||||| ||||||| || ||||||||||||    
T  14061321 ttaatgttgcattgacctttgaaagtgacagttaaacagaaacaaaatttttttcaaaaaatgacacttaaaaaggaacggagagagtaa 14061410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 14263612 - 14263524
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||| ||| |||||  |||| || ||| ||| |||||  ||||||||||| ||||||| || ||||| |||||    
T  14263612 ttaatgttgcattgaacttttaaagtgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggagggagta 14263524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 25703749 - 25703837
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||| |||||||||||||||||||| ||  |||| || ||| |||| ||||  ||||||||||| ||||||| || ||||| |||||    
T  25703749 ttaatgctgcattgaactttgaaaatgccagttaaataggaacaaaatatttcttcaaaagtgacacttaaaaaggaacggagggagta 25703837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 25812920 - 25813008
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||| |||||||||||||||||||| ||  |||| || ||| |||| ||||  ||||||||||| ||||||| || ||||| |||||    
T  25812920 ttaatgctgcattgaactttgaaaatgccagttaaataggaacaaaatatttcttcaaaagtgacacttaaaaaggaacggagggagta 25813008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 34046919 - 34046831
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||| |||||  |||| |||||| |||  ||||   |||||||||| ||||||| || ||||| |||||    
T  34046919 ttaatgttgcattgaactttgaaagtgacagttaaatagaaacaaaaaatttctctaaaagtgacacttaaaaaggaacggagggagta 34046831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 40604023 - 40604111
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    ||||||||||||||||||||||||||||||  |||| || ||| ||||||||   ||  ||||||| ||||||| || ||||| |||||    
T  40604023 ttaatgttgcattgaactttgaaaatgacagttaaataggaacaaaatttttatccatcagtgacacttaaaaaggaacggagggagta 40604111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 1245380 - 1245345
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaa 36  Q
    ||||||||||||||||||||||||||||||| ||||    
T  1245380 ttaatgttgcattgaactttgaaaatgacaattaaa 1245345  T

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Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 23848728 - 23848810
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggag 83  Q
    ||||||||||||| || ||||||| |||||  |||| || ||| |||||||||  ||||||||||| ||||||| || |||||    
T  23848728 ttaatgttgcattaaattttgaaagtgacagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggag 23848810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 27518879 - 27518969
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaat 91  Q
    ||||||||| |||||||||||||| |||||  |||| || ||| |||  ||||  |||||| |||| ||||||| || |||||||||||||    
T  27518879 ttaatgttgtattgaactttgaaagtgacagttaaataggaacaaaaaatttcttcaaaagagacacttaaaaaggaacggagagagtaat 27518969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 35028674 - 35028603
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||| ||| |||||  ||||  ||||| |||||||||  ||||||||||| |||||||    
T  35028674 ttaatgttgcattgaactttaaaattgaca--taaattgaaacaaaatttttcttcaaaagtgacatttaaaaa 35028603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 38238985 - 38238955
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaa 31  Q
    |||||||||||||||||||||||||||||||    
T  38238985 ttaatgttgcattgaactttgaaaatgacaa 38238955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 3720748 - 3720659
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaa 90  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||  |||   ||||||||||| ||||||| || ||||| ||||||    
T  3720748 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaaatttattcaaaagtgacaattaaaaaggaacggagggagtaa 3720659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 23793449 - 23793494
Alignment:
Q  3 aatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaat 48  Q
    |||||| |||||||||||||||||||||| |||| |||||| ||||    
T  23793449 aatgttacattgaactttgaaaatgacaattaaatagaaacaaaat 23793494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 41890590 - 41890517
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| |||||  |||  |||||| |||  |||  |||||||||||| |||||||    
T  41890590 ttaatgttgcattgaactttgaaagtgacagttaattagaaacaaaaaatttatgcaaaagtgacaattaaaaa 41890517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 38910324 - 38910234
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaat 91  Q
    |||||||||||||||||||| ||| |||||  |||| |||||| |||  ||||  ||||||||||| |||||||||| |||||||||||||    
T  38910324 ttaatgttgcattgaactttaaaagtgacagttaaatagaaacaaaaaatttctccaaaagtgacacttaaaaaagaacggagagagtaat 38910234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 1297907 - 1297995
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||| ||||||| |||||  |||| || ||| ||| |||||  ||||||||||| |||||||||| |||||||||||    
T  1297907 ttaatgttgcattgaattttgaaagtgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaagaacggagagagta 1297995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 10359404 - 10359492
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    ||||||||||||||||||||||||||||||  |||| |||||| ||| |||||  ||||||| ||||||| |||  | |||||||||||    
T  10359404 ttaatgttgcattgaactttgaaaatgacagttaaatagaaacaaaaattttctccaaaagttacagttataaagaaacggagagagta 10359492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 425175 - 425091
Alignment:
Q  5 tgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    ||||||||||||||||||||||||||  |||| |||||| |||  ||||  ||||||||||| ||||||| || ||||| |||||    
T  425175 tgttgcattgaactttgaaaatgacagttaaacagaaacaaaaaatttctccaaaagtgacacttaaaaatgaacggagggagta 425091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 4175649 - 4175737
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||| |||||  |||| || ||| ||| |||||  ||||||||||| ||||||| || ||||| |||||    
T  4175649 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggagggagta 4175737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 34261362 - 34261286
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaaga 77  Q
    |||| ||||||||||||||||||| |||||  |||| |||||| ||| ||||| |||||| ||||| ||||||||||    
T  34261362 ttaacgttgcattgaactttgaaagtgacagttaaatagaaacaaaaattttctgcaaaattgacacttaaaaaaga 34261286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 10889263 - 10889345
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggag 83  Q
    |||||||||||||||||||| |||||||||  |||| || ||| ||| |||||  ||||||||||| ||||||| || |||||    
T  10889263 ttaatgttgcattgaactttaaaaatgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaaggaacggag 10889345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 21157683 - 21157601
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggag 83  Q
    |||||||||||||||||||||||| |||||  |||  |||||| ||| ||||  |||||||||||| ||||||| || |||||    
T  21157683 ttaatgttgcattgaactttgaaagtgacagttaattagaaacaaaaattttatgcaaaagtgacaattaaaaaggaacggag 21157601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 28024428 - 28024518
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaat 91  Q
    |||||||| ||||||||||||||| |||||  |||| || ||| |||||||||  |||||| |||| ||||||| || | |||||||||||    
T  28024428 ttaatgttacattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaagagacacttaaaaaggaacagagagagtaat 28024518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 12723132 - 12723201
Alignment:
Q  5 tgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||| ||| |||||| |||| || ||| |||||||||  ||||| |||||||||||||    
T  12723132 tgttgcattgaactttaaaagtgacaattaaataggaacaaaatttttctccaaaaatgacagttaaaaa 12723201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 12784615 - 12784684
Alignment:
Q  5 tgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||| |||||  |||| || ||| |||||||||  ||||| |||||||||||||    
T  12784615 tgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaaatgacagttaaaaa 12784684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18794833 - 18794760
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| |||||  |||| |||||| |||  ||||  ||||||||||| |||||||    
T  18794833 ttaatgttgcattgaactttgaaagtgacagttaaatagaaacaaaaaatttctccaaaagtgacacttaaaaa 18794760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 7579837 - 7579925
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    ||||||||||||||||||| |||| |||||  |||| |||||| |||  ||||  ||||||||||| ||||||| || ||||| |||||    
T  7579837 ttaatgttgcattgaacttcgaaagtgacagttaaatagaaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagta 7579925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 39073094 - 39073006
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    ||||||||||||||||||||||||||||||  |||| || ||| || |||||   ||||| ||||| ||||||| || ||||| |||||    
T  39073094 ttaatgttgcattgaactttgaaaatgacagttaaataggaacaaattttttttccaaaattgacacttaaaaaggaacggagggagta 39073006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 21150542 - 21150460
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggag 83  Q
    |||||||||||||||||||||||| |||||  |||  |||||| |||  |||  |||||||||||| ||||||| || |||||    
T  21150542 ttaatgttgcattgaactttgaaagtgacagttaattagaaacaaaaaatttatgcaaaagtgacaattaaaaaggaacggag 21150460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 28463558 - 28463644
Alignment:
Q  5 tgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaat 91  Q
    |||||||||||||||||||| |||||  |||| | |||| |||  ||||  ||||||||||| ||||||| || ||||| |||||||    
T  28463558 tgttgcattgaactttgaaagtgacagttaaataaaaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagtaat 28463644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 31802838 - 31802788
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttt 51  Q
    ||||||||||||||||||||||||||||||  ||||  ||||| |||||||    
T  31802838 ttaatgttgcattgaactttgaaaatgacagttaaattgaaacaaaatttt 31802788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 6007933 - 6007860
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||| ||||||||||||||||| |||||  |||| |||||| |||  ||||  ||||||||||| |||||||    
T  6007933 ttaatgatgcattgaactttgaaagtgacagttaaatagaaacaaaaaatttctccaaaagtgacacttaaaaa 6007860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9076121 - 9076056
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgaca 66  Q
    |||||||||||||||||||||||| |||||  |||| || ||| ||||||||   |||||||||||    
T  9076121 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttatccaaaagtgaca 9076056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12664908 - 12664835
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| |||||  |||| || ||| ||| |||||  ||||||| ||| |||||||    
T  12664908 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaattttctccaaaagtaacacttaaaaa 12664835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18465751 - 18465678
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| || ||  |||| || ||| ||| |||||  ||||||||||| |||||||    
T  18465751 ttaatgttgcattgaactttgaaagtggcagttaaataggaacaaaaattttctccaaaagtgacacttaaaaa 18465678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 38363241 - 38363168
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| |||||  |||| || ||| ||| |||||  ||||||| ||| |||||||    
T  38363241 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaattttctccaaaagtaacacttaaaaa 38363168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 42911600 - 42911527
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| |||||  |||| || ||| ||| |||||  |||||| |||| |||||||    
T  42911600 ttaatgttgcattgaactttgaaagtgacagttaaatagtaacaaaaattttctccaaaagagacacttaaaaa 42911527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 34266616 - 34266706
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaat 91  Q
    ||||||||||||||||||||||||||||||  |||| |||||| ||| |||||  ||||||||||| ||||| |||| | ||| |||||||    
T  34266616 ttaatgttgcattgaactttgaaaatgacagttaaatagaaacaaaaattttctccaaaagtgacacttaaagaagaacagagggagtaat 34266706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 54106331 - 54106239
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaatct 93  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||||||||  ||||||||||| ||||||| ||  |||| |||||||||    
T  54106331 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttcttcaaaagtgacacttaaaaaggaatggagggagtaatct 54106239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 790618 - 790530
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||| |||||  |||| ||||||  || |||||  ||||||||||| ||||||| || ||||| |||||    
T  790618 ttaatgttgcattgaactttgaaagtgacagttaaatagaaacataaattttctccaaaagtgacacttaaaaaggaacggagggagta 790530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 48214135 - 48214047
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||| |||||  ||||  ||||| || ||||||  ||||||||||| ||||||| || ||||| |||||    
T  48214135 ttaatgttgcattgaactttgaaagtgacagttaaattgaaacaaattttttctccaaaagtgacacttaaaaaggaacggagggagta 48214047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 48152053 - 48151966
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagt 88  Q
    |||||||||||||||||||||||| |||||  ||||  ||||| || ||||||  ||||||||||| ||||||| || ||||| ||||    
T  48152053 ttaatgttgcattgaactttgaaagtgacagttaaattgaaacaaattttttctccaaaagtgacacttaaaaaggaacggagggagt 48151966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 20105260 - 20105178
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggag 83  Q
    |||||||||||||||||||||||| |||||  |||| || ||| ||| |||||  ||||||||||| ||||||| || |||||    
T  20105260 ttaatgttgcattgaactttgaaagtgacagttaaagaggaacaaaaattttctccaaaagtgacacttaaaaaggaacggag 20105178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 23771355 - 23771273
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggag 83  Q
    |||||||||||||||||||||||| |||||  |||  |||||| ||| ||||  |||||||||||| ||||||| || |||||    
T  23771355 ttaatgttgcattgaactttgaaagtgacagttaattagaaacaaaaattttatgcaaaagtgacaattaaaaaggaacggag 23771273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 54898264 - 54898354
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaat 91  Q
    |||||||||||||||||||||||| ||| |  |||| || ||| |||||||||  ||||||||||| ||||||| || | ||| |||||||    
T  54898264 ttaatgttgcattgaactttgaaagtgatagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacagagggagtaat 54898354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29803703 - 29803630
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| |||||| |||| |  ||| || ||||||  ||||||||||| |||||||    
T  29803703 ttaatgttgcattgaactttgaaagtgacaattaaatatgaacaaattttttctccaaaagtgacacttaaaaa 29803630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 43554458 - 43554385
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| |||||  |||| || ||| ||| |||||  ||||||||||| |||||||    
T  43554458 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaa 43554385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 52663510 - 52663422
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    ||||| |||| |||||||||||||||||||| |||| || ||| |||  ||||  ||||| ||||| ||||||| || |||||||||||    
T  52663510 ttaatattgctttgaactttgaaaatgacaattaaatagtaacaaaaaatttctccaaaactgacacttaaaaatgaacggagagagta 52663422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 53745459 - 53745547
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||  ||||  ||||||||||| ||||||| || ||||| |||||    
T  53745459 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagta 53745547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 3035591 - 3035642
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaattttt 52  Q
    ||||||||||||||||||||||||| ||||| |||| |||||| || |||||    
T  3035591 ttaatgttgcattgaactttgaaaacgacaaataaatagaaacaaagttttt 3035642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 36234435 - 36234346
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaa 90  Q
    |||| ||||||||||||||||||| |||||  |||| |||||| ||| |||||  || |||||||| ||| ||| || ||||| ||||||    
T  36234435 ttaacgttgcattgaactttgaaagtgacagttaaatagaaacaaaaattttcttcataagtgacacttacaaaggaacggagggagtaa 36234346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 47104333 - 47104422
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaa 90  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||  ||||   |||||||||| ||||||| || ||||| ||||||    
T  47104333 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaaatttctctaaaagtgacaattaaaaaggaacggagggagtaa 47104422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 51244692 - 51244619
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    ||||| |||||||||||||||||| |||||  |||| |  ||| |||||||||  ||||||||||| |||||||    
T  51244692 ttaatattgcattgaactttgaaagtgacagttaaataagaacaaaatttttcttcaaaagtgacatttaaaaa 51244619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 19093336 - 19093254
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggag 83  Q
    |||||||||||||||||||||||| ||||| ||||| || ||| |||||||||  ||||||||||| ||||||| || |||||    
T  19093336 ttaatgttgcattgaactttgaaagtgacaggtaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggag 19093254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 35531464 - 35531552
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||||||||  ||||||||||| ||||||| || ||||| |||||    
T  35531464 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggagggagta 35531552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 28679089 - 28679001
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||| |||||  |||| |  ||| |||||||||  ||||||||||| ||||||| || ||||| |||||    
T  28679089 ttaatgttgcattgaactttgaaagtgacagttaaacaagaacaaaatttttctccaaaagtgacacttaaaaaggaacggagggagta 28679001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 37609470 - 37609558
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||| |||||||||||||||||||||||||  |||| |  ||| ||| |||||  ||||||||||| ||||||| || |||||||||||    
T  37609470 ttaacgttgcattgaactttgaaaatgacagttaaataagaacaaaaattttctccaaaagtgacacttaaaaaggaacggagagagta 37609558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 49908351 - 49908439
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||| ||| |||||  |||| |||||| |||||||||   |||||||||| ||||||| || ||||| |||||    
T  49908351 ttaatgttgcattgaactttaaaagtgacagttaaatagaaacaaaatttttctttaaaagtgacacttaaaaaggaacggagggagta 49908439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 21927865 - 21927955
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaat 91  Q
    |||||||||||||||||||||||| |||||  |||| |  ||| |||  |||| |||||||||||| ||||||| || ||||| |||||||    
T  21927865 ttaatgttgcattgaactttgaaagtgacagttaaataagaacaaaaaatttctgcaaaagtgacacttaaaaaggaacggagggagtaat 21927955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 32348046 - 32347964
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggag 83  Q
    |||||||||||||||||||||||| || ||  ||||  ||||| |||||||||  ||||||||||| ||||||| || |||||    
T  32348046 ttaatgttgcattgaactttgaaagtggcagttaaattgaaacaaaatttttctccaaaagtgacacttaaaaaggaacggag 32347964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 10675970 - 10675881
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaa 90  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||  ||||  |||||| |||| |||||||||| ||||| ||||||    
T  10675970 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaaatttcttcaaaagagacacttaaaaaagaacggagggagtaa 10675881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 37735308 - 37735397
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaa 90  Q
    ||||| |||||||||||||||| | |||||  |||| || ||| || ||||||   |||||||||||||||||| || ||||||||||||    
T  37735308 ttaattttgcattgaactttgacagtgacagttaaataggaacaaattttttctttaaaagtgacagttaaaaaggaacggagagagtaa 37735397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 44182828 - 44182739
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaa 90  Q
    |||||||||||||||||||||| | |||||  |||| |||||| || ||||||  ||||| ||||| ||||||| || ||||| ||||||    
T  44182828 ttaatgttgcattgaactttgagagtgacagttaaatagaaacaaattttttctccaaaattgacacttaaaaaggaacggagggagtaa 44182739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 7783018 - 7782946
Alignment:
Q  2 taatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    ||||||||||||||||||||||| |||||  |||| || ||| ||| |||||  ||||||||||| |||||||    
T  7783018 taatgttgcattgaactttgaaagtgacagttaaataggaacaaaaattttctccaaaagtgacacttaaaaa 7782946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 8464618 - 8464706
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||  ||||  ||||||||||| ||||||| || ||||| |||||    
T  8464618 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaacgaacggagggagta 8464706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 15660651 - 15660567
Alignment:
Q  5 tgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||| |||||  |||| || ||| |||| ||||  ||||| ||||| ||||||| || |||||||||||    
T  15660651 tgttgcattgaactttgaaagtgacagttaaataggaacaaaatatttctccaaaaatgacacttaaaaaggaacggagagagta 15660567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 31588908 - 31588996
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||| |||||  |||| |||||| ||| |||||   |||| ||||| ||||||| || ||||| |||||    
T  31588908 ttaatgttgcattgaactttgaaagtgacagttaaatagaaacaaaaattttctctaaaaatgacacttaaaaaggaacggagggagta 31588996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 32168481 - 32168569
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||| ||||||||||||||||| |||||  |||| |||||| ||| |||||   |||||||||| ||||||| || ||||| |||||    
T  32168481 ttaatgatgcattgaactttgaaactgacagttaaatagaaacaaaaattttctctaaaagtgacaattaaaaaggaacggagggagta 32168569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 44818522 - 44818438
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagag 85  Q
    |||||||||||||||||||||||||||| |  |||| || ||| ||  ||||| |||||||||||  ||||||| || |||||||    
T  44818522 ttaatgttgcattgaactttgaaaatgaaagttaaataggaacaaagattttctgcaaaagtgacgcttaaaaaggaacggagag 44818438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 45368154 - 45368083
Alignment:
Q  3 aatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||| ||||||||||||||| |||||  |||| |||||| ||| |||||  ||||||||||| |||||||    
T  45368154 aatgtttcattgaactttgaaagtgacagataaatagaaacaaaaattttccccaaaagtgacatttaaaaa 45368083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 45226746 - 45226828
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggag 83  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||  ||||  ||||||||||| ||||||| || |||||    
T  45226746 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacggag 45226828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 30686479 - 30686406
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||  ||||  ||||||||||| |||||||    
T  30686479 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaa 30686406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 35255554 - 35255481
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| |||||| |||| || ||| |||  ||||  |||||| |||| |||||||    
T  35255554 ttaatgttgcattgaactttgaaagtgacaattaaataggaacaaaaaatttcttcaaaagagacacttaaaaa 35255481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 38648525 - 38648452
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||| ||||||| |||||  |||| || ||| |||||||||   |||||||||| |||||||    
T  38648525 ttaatgttgcattgaagtttgaaagtgacagttaaataggaacaaaatttttctcaaaaagtgacatttaaaaa 38648452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 8966075 - 8966163
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||| |||||  |||  |||||| ||||||||  |||||||||||| ||||||| || ||||| |||||    
T  8966075 ttaatgttgcattgaactttgaaagtgacagttaattagaaacaaaatttttatgcaaaagtgacaattaaaaaggaacggagggagta 8966163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 12838253 - 12838341
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    ||||||||||| |||||||||||| |||||  |||| |||||| |||||||||  ||||||||||| ||||||| || ||||| |||||    
T  12838253 ttaatgttgcactgaactttgaaagtgacagttaaatagaaacaaaatttttctccaaaagtgacacttaaaaaggaacggagggagta 12838341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 31399106 - 31399179
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| |||||| ||||||||||| || ||||||  ||||| ||| | |||||||    
T  31399106 ttaatgttgcattgaactttgaaagtgacaattaaaaagaaacaaattttttctccaaaaatgatacttaaaaa 31399179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 17896698 - 17896786
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    ||||| |||||||||||||||||| |||||  |||| || ||| |||||||||  ||||||||||| ||||||| || ||||| |||||    
T  17896698 ttaatattgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggagggagta 17896786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 33100008 - 33100096
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||  ||||  ||||||||||| |||||||||| ||||| |||||    
T  33100008 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaagaacggagggagta 33100096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 35112497 - 35112409
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    ||||||||||| |||||||||||| |||||  ||||  ||||| |||||||||  ||||||||||| ||||||| || ||||| |||||    
T  35112497 ttaatgttgcaatgaactttgaaagtgacagttaaattgaaacaaaatttttctccaaaagtgacacttaaaaaggaacggagggagta 35112409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 22950993 - 22951066
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||| ||||||| |||||  |||| |||||| ||| |||||  ||||||||||| |||||||    
T  22950993 ttaatgttgcattgaattttgaaagtgacagttaaatagaaacaaaaattttcttcaaaagtgacacttaaaaa 22951066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 33257949 - 33257876
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| ||| |  ||||  ||||| |||||||||  ||||||||||| |||||||    
T  33257949 ttaatgttgcattgaactttgaaagtgatagttaaattgaaacaaaatttttctccaaaagtgacacttaaaaa 33257876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 18194389 - 18194477
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    ||||| |||||||||| ||||||||||| |  |||| || ||| || ||||||   ||||||||||||||||||||| ||||| |||||    
T  18194389 ttaattttgcattgaaatttgaaaatgatagttaaataggaacaaattttttctctaaaagtgacagttaaaaaagaacggagggagta 18194477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 31430627 - 31430539
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||  ||||  ||||||||||| ||||||| || ||||| |||||    
T  31430627 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaaatttctacaaaagtgacacttaaaaaggaacggagggagta 31430539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 32528503 - 32528591
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    ||||| || ||||||||||||||| |||||  |||| || ||| ||| |||||  ||||||| ||| |||||||||| |||||||||||    
T  32528503 ttaatatttcattgaactttgaaagtgacagttaaataggaacaaaaattttcttcaaaagtaacacttaaaaaagaacggagagagta 32528591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 41675361 - 41675449
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||| ||||||||||||||| |||||  |||| |  ||| ||| ||||| |||||||||||| ||||||| || ||||| |||||    
T  41675361 ttaatgttacattgaactttgaaagtgacagttaaacaagaacaaaaattttctgcaaaagtgacacttaaaaaggaacggagggagta 41675449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 29497709 - 29497780
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaa 72  Q
    |||||||||||||||||||||||| |||||  |||| || ||  |||||||||   ||||||||||||||||    
T  29497709 ttaatgttgcattgaactttgaaagtgacagttaaataggaataaaatttttctcaaaaagtgacagttaaa 29497780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 13431308 - 13431394
Alignment:
Q  3 aatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||| ||||||| |||||  |||| || ||| || ||||||   |||||||||| |||||||||| ||||| |||||    
T  13431308 aatgttgcattgaattttgaaagtgacagttaaataggaacaaattttttctctaaaagtgacaattaaaaaagaacggagggagta 13431394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 24283650 - 24283568
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggag 83  Q
    |||||||||||||||||||||||| ||||| ||||| || ||| || ||||||   | ||||||| |||||||| || |||||    
T  24283650 ttaatgttgcattgaactttgaaagtgacaggtaaataggaacaaattttttctctagaagtgaccgttaaaaaggaacggag 24283568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 46392612 - 46392694
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggag 83  Q
    ||||||||||||||||||||||||| ||||| |||| || ||| ||||| |||  |||||| || | ||||||| || |||||    
T  46392612 ttaatgttgcattgaactttgaaaacgacaaataaataggaacaaaattgttctacaaaagcgaaaattaaaaaggaacggag 46392694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 2408836 - 2408909
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| |||||  |||| |  ||| || ||||||  ||||||||||| |||||||    
T  2408836 ttaatgttgcattgaactttgaaagtgacagttaaataagaacaaattttttctccaaaagtgacacttaaaaa 2408909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 18470375 - 18470286
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaa 90  Q
    |||||||||||||||||||||||| |||||  |||| |  ||| |||  ||||  ||||||||||| ||||||| || ||||| ||||||    
T  18470375 ttaatgttgcattgaactttgaaagtgacagttaaataagaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagtaa 18470286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 20035116 - 20035043
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| || ||  |||| || ||| |||  |||| |||||||||||| |||||||    
T  20035116 ttaatgttgcattgaactttgaaagtgccagttaaataggaacaaaaaatttctgcaaaagtgacacttaaaaa 20035043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 20045527 - 20045454
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| || ||  |||| || ||| |||  |||| |||||||||||| |||||||    
T  20045527 ttaatgttgcattgaactttgaaagtgccagttaaataggaacaaaaaatttctgcaaaagtgacacttaaaaa 20045454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 32966224 - 32966313
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaa 90  Q
    ||||||||||||| ||||||||||||||||  |||| || ||  |||  ||||  ||||||||||| ||||||| || ||||| ||||||    
T  32966224 ttaatgttgcatttaactttgaaaatgacagttaaataggaataaaaaatttctccaaaagtgacacttaaaaaggaacggagggagtaa 32966313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 35746819 - 35746892
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    ||||||||| |||||||||||||| |||||  |||| |||||  ||| |||||  ||||||||||| |||||||    
T  35746819 ttaatgttgtattgaactttgaaagtgacatttaaatagaaataaaaattttctccaaaagtgacaattaaaaa 35746892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.0000000000001; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 847864 - 847800
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgac 65  Q
    |||||||||||||||||||||||||||||||||||| || |||  ||||||||  ||||||||||    
T  847864 ttaatgttgcattgaactttgaaaatgacaagtaaataggaacacaatttttctacaaaagtgac 847800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 3849133 - 3849045
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||||||||  ||||||||||| ||||||| || ||||| |||||    
T  3849133 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaatttttctccaaaagtgacacttaaaaaggaacggagggagta 3849045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 31854668 - 31854752
Alignment:
Q  5 tgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||| |||||| |||| | |||| |||||||||  ||||||| ||| ||||||| || ||||| |||||    
T  31854668 tgttgcattgaactttgaaagtgacaattaaataaaaacaaaatttttctccaaaagtaacacttaaaaaggaacggagggagta 31854752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 26470896 - 26470986
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaat 91  Q
    |||||||||||||||||||||||| |||||| |||| || ||| |||  ||||  |||||| |||| ||||||| || ||||| |||||||    
T  26470896 ttaatgttgcattgaactttgaaagtgacaattaaataggaacaaaaaatttcttcaaaagagacacttaaaaaggaacggagggagtaat 26470986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 364716 - 364789
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||| |||||||||||||  |||| || ||| ||| |||||  ||||||||||| |||||||    
T  364716 ttaatgttgcattgaattttgaaaatgacagttaaatagtaacaaaaattttctccaaaagtgacacttaaaaa 364789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 879332 - 879267
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgaca 66  Q
    ||||||||||||||||||||||||| || ||||||| || |||  ||||||||  |||||||||||    
T  879332 ttaatgttgcattgaactttgaaaaagaaaagtaaataggaacacaatttttcttcaaaagtgaca 879267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 17193226 - 17193138
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagta 89  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||  ||||  ||||||||||| ||||||| || ||||| |||||    
T  17193226 ttaatgttgcattgaactttgaaagtgacatttaaataggaacaaaaaatttctccaaaagtgacacttaaaaaggaacggagggagta 17193138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 24635772 - 24635686
Alignment:
Q  5 tgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaat 91  Q
    |||| |||||||||||||||||||||  |||| |||||| |||  ||||  |||||| |||| ||||||| || ||||| |||||||    
T  24635772 tgttacattgaactttgaaaatgacagttaaatagaaacaaaaaatttctccaaaagggacacttaaaaaggaacggagggagtaat 24635686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3621658 - 3621585
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| ||| |  |||| |||||  || ||||||  ||||||||||| |||||||    
T  3621658 ttaatgttgcattgaactttgaaagtgatagttaaatagaaataaattttttcttcaaaagtgacacttaaaaa 3621585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 21887758 - 21887787
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgaca 30  Q
    ||||||||||||||||||||||||||||||    
T  21887758 ttaatgttgcattgaactttgaaaatgaca 21887787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 31244922 - 31245011
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaa 90  Q
    |||||||||||||||||||||||| |||||  |||| | |||| |||  ||||   |||| ||||| ||||||| || ||||||||||||    
T  31244922 ttaatgttgcattgaactttgaaagtgacagttaaatacaaacaaaaaatttctctaaaaatgacaattaaaaatgaacggagagagtaa 31245011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 38; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 26300 - 26373
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||| ||| |||||| |||| |||||| || ||||||  ||||||||||| |||||||    
T  26300 ttaatgttgcattgaactttaaaagtgacaattaaatagaaacaaattttttctccaaaagtgacacttaaaaa 26373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 8222 - 8152
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaa 71  Q
    ||||||||||||||||||||||||||||||  |||| |||||| |||  ||||  ||||||||||| ||||    
T  8222 ttaatgttgcattgaactttgaaaatgacagttaaatagaaacaaaaaatttcttcaaaagtgacacttaa 8152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 30865 - 30955
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaaagagcggagagagtaat 91  Q
    |||||||| ||||||||||||||| |||||  |||  || ||| || ||||||   ||||||||||||||||||||| ||||| |||||||    
T  30865 ttaatgttacattgaactttgaaagtgacagttaattaggaacaaattttttctctaaaagtgacagttaaaaaagaacggagggagtaat 30955  T

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Target: scaffold0325 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 383 - 310
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| |||||| |||| || ||| || ||||||   |||||||||| |||||||    
T  383 ttaatgttgcattgaactttgaaagtgacaattaaatagtaacaaattttttctctaaaagtgacaattaaaaa 310  T

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Target: scaffold0040 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 69168 - 69095
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    ||||| |||||||||||||||||| |||||| |||| || ||| ||| |||||  ||||||||||| |||||||    
T  69168 ttaatattgcattgaactttgaaagtgacaattaaataggaacaaaaattttcttcaaaagtgacacttaaaaa 69095  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 49215 - 49142
Alignment:
Q  1 ttaatgttgcattgaactttgaaaatgacaagtaaaaagaaacgaaatttttcggcaaaagtgacagttaaaaa 74  Q
    |||||||||||||||||||||||| |||||  |||| || ||| |||  ||||  ||||||||||| |||||||    
T  49215 ttaatgttgcattgaactttgaaagtgacagttaaataggaacaaaaaatttctccaaaagtgacacttaaaaa 49142  T

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