View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8939_low_13 (Length: 442)

Name: NF8939_low_13
Description: NF8939
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8939_low_13
NF8939_low_13
[»] chr5 (39 HSPs)
chr5 (12-146)||(39807764-39807898)
chr5 (299-425)||(39807530-39807652)
chr5 (213-311)||(36739035-36739133)
chr5 (213-317)||(26791124-26791228)
chr5 (213-309)||(33037607-33037703)
chr5 (213-312)||(18258678-18258777)
chr5 (213-309)||(41321342-41321438)
chr5 (213-311)||(1671629-1671727)
chr5 (213-309)||(7287077-7287173)
chr5 (213-309)||(28306020-28306116)
chr5 (213-312)||(28467338-28467437)
chr5 (213-310)||(5168270-5168367)
chr5 (213-310)||(14051202-14051299)
chr5 (212-308)||(1764310-1764406)
chr5 (213-301)||(7076464-7076552)
chr5 (213-309)||(14923160-14923256)
chr5 (213-311)||(1274445-1274542)
chr5 (213-270)||(35646470-35646527)
chr5 (213-308)||(13168609-13168704)
chr5 (213-309)||(15479556-15479652)
chr5 (223-311)||(17626083-17626171)
chr5 (212-303)||(8686977-8687068)
chr5 (213-303)||(2972411-2972501)
chr5 (224-313)||(7552851-7552940)
chr5 (213-312)||(22972204-22972303)
chr5 (243-310)||(35634722-35634789)
chr5 (213-312)||(39591767-39591866)
chr5 (213-312)||(39592159-39592258)
chr5 (222-312)||(13309979-13310069)
chr5 (213-301)||(18660846-18660933)
chr5 (213-301)||(27487974-27488062)
chr5 (225-301)||(33599061-33599137)
chr5 (219-258)||(39807652-39807691)
chr5 (236-310)||(3565194-3565268)
chr5 (213-270)||(1079879-1079936)
chr5 (226-308)||(42175021-42175101)
chr5 (214-280)||(25560935-25561000)
chr5 (213-250)||(19521950-19521987)
chr5 (263-311)||(42475558-42475606)
[»] chr8 (28 HSPs)
chr8 (213-309)||(42768291-42768387)
chr8 (224-303)||(32501090-32501169)
chr8 (213-311)||(12898815-12898913)
chr8 (225-305)||(36251425-36251505)
chr8 (213-312)||(37449310-37449409)
chr8 (213-303)||(5277393-5277483)
chr8 (213-311)||(27325845-27325943)
chr8 (213-310)||(34186694-34186791)
chr8 (212-309)||(4054174-4054271)
chr8 (213-309)||(22719527-22719623)
chr8 (226-310)||(24479323-24479407)
chr8 (213-310)||(29025347-29025444)
chr8 (213-309)||(7271937-7272033)
chr8 (213-308)||(36660339-36660434)
chr8 (213-310)||(11253429-11253526)
chr8 (213-317)||(10839362-10839466)
chr8 (213-312)||(43397868-43397967)
chr8 (213-310)||(34639620-34639717)
chr8 (213-313)||(37133746-37133846)
chr8 (213-270)||(31249451-31249508)
chr8 (213-303)||(36816510-36816600)
chr8 (228-308)||(32133425-32133505)
chr8 (213-312)||(13106567-13106666)
chr8 (213-270)||(10731633-10731690)
chr8 (224-268)||(2883286-2883330)
chr8 (224-268)||(3151236-3151280)
chr8 (246-310)||(10692551-10692615)
chr8 (224-280)||(12734928-12734984)
[»] chr3 (56 HSPs)
chr3 (213-319)||(52254016-52254122)
chr3 (213-309)||(42356972-42357068)
chr3 (212-309)||(32924169-32924266)
chr3 (213-313)||(27541386-27541486)
chr3 (213-309)||(36670902-36670998)
chr3 (212-309)||(7934061-7934157)
chr3 (212-309)||(44413283-44413380)
chr3 (213-310)||(52939738-52939835)
chr3 (213-313)||(33939325-33939425)
chr3 (213-313)||(38926715-38926815)
chr3 (213-303)||(5244316-5244406)
chr3 (213-311)||(46623994-46624092)
chr3 (224-309)||(16969454-16969539)
chr3 (212-309)||(19149076-19149173)
chr3 (213-310)||(41309204-41309301)
chr3 (223-309)||(47472426-47472512)
chr3 (224-312)||(44856051-44856139)
chr3 (213-312)||(5114165-5114264)
chr3 (213-308)||(35597249-35597344)
chr3 (213-303)||(42358532-42358622)
chr3 (213-314)||(13348017-13348118)
chr3 (232-309)||(13735836-13735913)
chr3 (213-309)||(37503635-37503731)
chr3 (216-315)||(55151599-55151698)
chr3 (213-311)||(44813223-44813321)
chr3 (213-309)||(288813-288909)
chr3 (224-308)||(24256660-24256744)
chr3 (213-312)||(37302633-37302732)
chr3 (213-286)||(20547901-20547974)
chr3 (213-270)||(41505578-41505635)
chr3 (223-311)||(21217609-21217697)
chr3 (213-309)||(26014899-26014995)
chr3 (236-312)||(31157562-31157638)
chr3 (223-311)||(37056943-37057031)
chr3 (236-311)||(52326129-52326204)
chr3 (213-311)||(35376967-35377065)
chr3 (213-311)||(51982186-51982284)
chr3 (223-308)||(23592555-23592640)
chr3 (213-312)||(7668073-7668171)
chr3 (224-311)||(44383287-44383374)
chr3 (213-303)||(8847197-8847286)
chr3 (213-303)||(11630644-11630734)
chr3 (239-312)||(44445407-44445480)
chr3 (213-309)||(49780628-49780724)
chr3 (213-308)||(35201323-35201418)
chr3 (213-260)||(45000150-45000197)
chr3 (236-308)||(23600703-23600775)
chr3 (223-312)||(25641468-25641557)
chr3 (213-270)||(44413849-44413906)
chr3 (225-270)||(50318316-50318361)
chr3 (240-308)||(28539629-28539697)
chr3 (255-312)||(42478086-42478145)
chr3 (213-266)||(32205682-32205735)
chr3 (237-310)||(39630504-39630577)
chr3 (213-273)||(45711363-45711423)
chr3 (222-266)||(49087038-49087082)
[»] chr1 (56 HSPs)
chr1 (213-309)||(26469446-26469542)
chr1 (213-312)||(649856-649955)
chr1 (212-303)||(45333797-45333888)
chr1 (213-311)||(27464943-27465041)
chr1 (213-309)||(37685416-37685512)
chr1 (213-309)||(37700006-37700102)
chr1 (213-312)||(19055644-19055743)
chr1 (213-311)||(31088268-31088366)
chr1 (213-303)||(35369787-35369877)
chr1 (213-319)||(37274911-37275017)
chr1 (213-311)||(45121367-45121464)
chr1 (213-318)||(23645498-23645603)
chr1 (224-309)||(50726136-50726221)
chr1 (224-310)||(33100906-33100992)
chr1 (213-303)||(50932391-50932481)
chr1 (213-309)||(44914459-44914556)
chr1 (213-309)||(8350087-8350182)
chr1 (213-303)||(3851245-3851335)
chr1 (224-309)||(37619642-37619727)
chr1 (213-309)||(15469945-15470040)
chr1 (213-309)||(44519039-44519135)
chr1 (213-309)||(48470726-48470822)
chr1 (213-310)||(52576188-52576286)
chr1 (222-311)||(21401494-21401583)
chr1 (222-303)||(40861156-40861237)
chr1 (234-310)||(30735180-30735256)
chr1 (213-312)||(18512228-18512327)
chr1 (224-312)||(51718515-51718599)
chr1 (224-309)||(2571733-2571819)
chr1 (213-309)||(3981914-3982010)
chr1 (213-312)||(45640389-45640487)
chr1 (223-311)||(46907292-46907380)
chr1 (213-309)||(51571234-51571330)
chr1 (213-283)||(8828035-8828105)
chr1 (213-311)||(9566846-9566944)
chr1 (213-270)||(12657309-12657367)
chr1 (213-266)||(3159463-3159516)
chr1 (223-312)||(43775303-43775392)
chr1 (213-301)||(15082947-15083034)
chr1 (224-310)||(10627697-10627783)
chr1 (213-311)||(30467419-30467517)
chr1 (224-266)||(37985317-37985359)
chr1 (224-273)||(4776854-4776903)
chr1 (224-313)||(18434893-18434982)
chr1 (213-310)||(31827038-31827135)
chr1 (213-309)||(19947632-19947728)
chr1 (213-260)||(6693244-6693291)
chr1 (213-268)||(29359724-29359779)
chr1 (224-315)||(44517843-44517934)
chr1 (213-308)||(49065253-49065348)
chr1 (213-312)||(50149033-50149132)
chr1 (278-312)||(41677221-41677255)
chr1 (247-308)||(30570645-30570706)
chr1 (213-270)||(41677251-41677308)
chr1 (255-312)||(50333337-50333394)
chr1 (213-310)||(50775043-50775140)
[»] chr2 (40 HSPs)
chr2 (213-311)||(43487466-43487564)
chr2 (213-308)||(9207677-9207772)
chr2 (213-316)||(9647219-9647322)
chr2 (213-313)||(18254093-18254193)
chr2 (213-312)||(9990778-9990877)
chr2 (213-311)||(1248773-1248871)
chr2 (212-311)||(22888703-22888802)
chr2 (213-312)||(41042341-41042440)
chr2 (212-319)||(42421776-42421883)
chr2 (213-315)||(41195671-41195773)
chr2 (213-303)||(42091396-42091488)
chr2 (215-303)||(6049239-6049327)
chr2 (213-312)||(9194328-9194427)
chr2 (213-311)||(2076656-2076754)
chr2 (213-310)||(37737858-37737955)
chr2 (225-312)||(9760117-9760204)
chr2 (213-312)||(32477419-32477518)
chr2 (224-309)||(3838768-3838853)
chr2 (213-309)||(7698258-7698354)
chr2 (215-301)||(19633371-19633458)
chr2 (215-301)||(19830272-19830359)
chr2 (213-314)||(21611538-21611644)
chr2 (213-308)||(34944979-34945074)
chr2 (223-308)||(41056636-41056721)
chr2 (223-311)||(25270468-25270556)
chr2 (213-270)||(6511338-6511395)
chr2 (223-311)||(3097747-3097835)
chr2 (223-311)||(13333056-13333144)
chr2 (213-297)||(19108993-19109077)
chr2 (213-311)||(8848583-8848681)
chr2 (213-270)||(22416300-22416357)
chr2 (213-310)||(27490617-27490714)
chr2 (222-270)||(17388530-17388578)
chr2 (213-310)||(7663954-7664050)
chr2 (213-270)||(44287369-44287426)
chr2 (213-311)||(1352476-1352574)
chr2 (213-303)||(19642685-19642775)
chr2 (213-258)||(10216937-10216982)
chr2 (278-311)||(22416353-22416386)
chr2 (248-310)||(136049-136108)
[»] chr4 (51 HSPs)
chr4 (213-310)||(26724859-26724956)
chr4 (213-312)||(51986129-51986228)
chr4 (213-311)||(23369218-23369316)
chr4 (213-311)||(44539821-44539919)
chr4 (213-313)||(26732312-26732412)
chr4 (213-309)||(53801647-53801743)
chr4 (213-311)||(26492094-26492192)
chr4 (213-311)||(37297136-37297233)
chr4 (213-310)||(36177993-36178090)
chr4 (214-314)||(31641448-31641548)
chr4 (217-309)||(43175075-43175167)
chr4 (215-314)||(29175314-29175413)
chr4 (213-309)||(39440571-39440667)
chr4 (213-312)||(11068775-11068874)
chr4 (213-300)||(37997341-37997428)
chr4 (213-303)||(10250409-10250499)
chr4 (213-303)||(24575745-24575835)
chr4 (213-310)||(27965074-27965169)
chr4 (215-309)||(46213059-46213153)
chr4 (213-310)||(5622545-5622642)
chr4 (224-309)||(38376378-38376463)
chr4 (213-301)||(15175633-15175721)
chr4 (213-301)||(38134440-38134528)
chr4 (212-303)||(27050980-27051071)
chr4 (213-311)||(42853664-42853762)
chr4 (224-321)||(26907958-26908055)
chr4 (223-311)||(38382418-38382506)
chr4 (223-311)||(47181938-47182026)
chr4 (223-311)||(48402083-48402171)
chr4 (224-311)||(39478535-39478622)
chr4 (213-311)||(2575676-2575774)
chr4 (224-270)||(46634198-46634244)
chr4 (213-270)||(29531533-29531590)
chr4 (225-311)||(56363931-56364017)
chr4 (223-311)||(34616658-34616746)
chr4 (213-311)||(39654911-39655009)
chr4 (224-270)||(50608551-50608597)
chr4 (213-270)||(2268434-2268491)
chr4 (213-276)||(56474688-56474751)
chr4 (222-312)||(19473841-19473931)
chr4 (213-311)||(40348881-40348974)
chr4 (240-306)||(45083086-45083152)
chr4 (216-310)||(50721631-50721725)
chr4 (213-310)||(35897788-35897884)
chr4 (223-303)||(31995807-31995889)
chr4 (235-270)||(42360265-42360300)
chr4 (213-303)||(42395931-42396021)
chr4 (213-315)||(42491161-42491263)
chr4 (237-286)||(38510682-38510731)
chr4 (253-310)||(39259080-39259137)
chr4 (213-310)||(50831642-50831739)
[»] scaffold0056 (1 HSPs)
scaffold0056 (213-317)||(76499-76603)
[»] chr6 (30 HSPs)
chr6 (213-309)||(552880-552976)
chr6 (213-310)||(32316815-32316912)
chr6 (213-313)||(15974695-15974795)
chr6 (217-312)||(33430247-33430342)
chr6 (213-309)||(13689882-13689978)
chr6 (213-313)||(26595436-26595536)
chr6 (213-309)||(31077881-31077977)
chr6 (212-303)||(18737461-18737552)
chr6 (213-312)||(34047474-34047573)
chr6 (213-310)||(1156807-1156904)
chr6 (212-309)||(14818018-14818115)
chr6 (223-311)||(16199547-16199635)
chr6 (224-309)||(5694039-5694124)
chr6 (213-270)||(5080494-5080551)
chr6 (213-270)||(8098524-8098581)
chr6 (236-308)||(11612298-11612370)
chr6 (213-309)||(22079451-22079547)
chr6 (213-311)||(4820454-4820552)
chr6 (213-309)||(277078-277174)
chr6 (213-280)||(2241942-2242009)
chr6 (213-298)||(3853206-3853291)
chr6 (222-310)||(30457601-30457689)
chr6 (212-260)||(33603217-33603265)
chr6 (230-273)||(5570262-5570305)
chr6 (213-312)||(24900861-24900960)
chr6 (275-309)||(5080467-5080501)
chr6 (223-312)||(21968779-21968866)
chr6 (116-146)||(25811888-25811918)
chr6 (224-297)||(11014890-11014963)
chr6 (116-144)||(11635587-11635615)
[»] scaffold0199 (1 HSPs)
scaffold0199 (215-312)||(8757-8854)
[»] chr7 (30 HSPs)
chr7 (213-310)||(24614203-24614300)
chr7 (213-309)||(38956506-38956602)
chr7 (213-309)||(44895460-44895556)
chr7 (213-317)||(25192797-25192901)
chr7 (212-308)||(32529745-32529841)
chr7 (213-310)||(43025427-43025524)
chr7 (212-309)||(41989628-41989727)
chr7 (213-312)||(3937008-3937107)
chr7 (237-312)||(43942743-43942818)
chr7 (213-309)||(45851095-45851188)
chr7 (213-310)||(40112841-40112938)
chr7 (213-301)||(22918065-22918153)
chr7 (213-310)||(41189428-41189527)
chr7 (223-311)||(46022153-46022241)
chr7 (213-311)||(48062144-48062242)
chr7 (224-301)||(46578031-46578108)
chr7 (223-311)||(7701641-7701729)
chr7 (213-270)||(38073307-38073364)
chr7 (213-309)||(40417861-40417957)
chr7 (213-293)||(44189214-44189294)
chr7 (213-315)||(31445405-31445507)
chr7 (213-310)||(35072249-35072346)
chr7 (247-310)||(3614333-3614396)
chr7 (213-303)||(35207588-35207676)
chr7 (229-303)||(13401557-13401631)
chr7 (212-310)||(35627907-35628005)
chr7 (213-310)||(35098590-35098687)
chr7 (213-270)||(38861183-38861240)
chr7 (222-303)||(42552994-42553075)
chr7 (224-308)||(47391214-47391298)
[»] scaffold0098 (1 HSPs)
scaffold0098 (222-309)||(49391-49478)
[»] scaffold0519 (1 HSPs)
scaffold0519 (213-310)||(11869-11966)
[»] scaffold0067 (1 HSPs)
scaffold0067 (213-270)||(35610-35667)
[»] scaffold0087 (1 HSPs)
scaffold0087 (223-315)||(53243-53335)
[»] scaffold0148 (1 HSPs)
scaffold0148 (253-312)||(20786-20845)
[»] scaffold0184 (1 HSPs)
scaffold0184 (212-310)||(16676-16773)
[»] scaffold0078 (1 HSPs)
scaffold0078 (212-310)||(56071-56168)


Alignment Details
Target: chr5 (Bit Score: 110; Significance: 3e-55; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 39807898 - 39807764
Alignment:
Q  12 ataatactagaaattattgataatctactcacgtaaattacatctaataaaagagtaattgtttgagataacgttagaaagatannnnnnncatagcatt 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| |    
T  39807898 ataatactagaaattattgataatctactcacgtaaattacatctaataaaagagtaattgtttgagataacgttagaaagatatttttttcatagcaat 39807799  T
Q  112 gatctttaaaaatgagaaatgatatttgaacaacc 146  Q
    |||||||||||||||||||||||||||||||||||    
T  39807798 gatctttaaaaatgagaaatgatatttgaacaacc 39807764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 299 - 425
Target Start/End: Complemental strand, 39807652 - 39807530
Alignment:
Q  299 taacagaactctttaaaaatattacaaccgtgttgtattgtcaatcagcactcacaggcaggaaggcctatgatgttggttatacataaaggcaaccctc 398  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||    
T  39807652 taacataactctttaaaaatattacaaccgtgttgtattgtcaatcagcactcacaggcagg----cctatgatgttggttatacataaaggcaaccctc 39807557  T
Q  399 catcgtccgtgtttgatgcaaaagttt 425  Q
    |||||||||||||||||||||||||||    
T  39807556 catcgtccgtgtttgatgcaaaagttt 39807530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 36739035 - 36739133
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  36739035 tattgctttggtttttgtgtcactacctcatttcttttgtaaaattttggttgtcacaaaaattatcacatatatggatgttcaaataacacaactctt 36739133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 213 - 317
Target Start/End: Complemental strand, 26791228 - 26791124
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| |||||||||| ||||| |||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||| |||||||     
T  26791228 tattgctttggtttttgtgccactaactcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctta 26791129  T
Q  313 aaaaa 317  Q
    |||||    
T  26791128 aaaaa 26791124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 33037607 - 33037703
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||| |||||    
T  33037607 tattgctttgatttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 33037703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 213 - 312
Target Start/End: Complemental strand, 18258777 - 18258678
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||| ||| |||||||||| |||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||| ||||||||    
T  18258777 tatttctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 18258678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 41321342 - 41321438
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||| ||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||| |||||    
T  41321342 tattactttggtttttgtgtcaatacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatatggatattcaaataacacaactc 41321438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 1671629 - 1671727
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    ||||| || ||||||||||||| |||||||||||||||||||||||||  ||||||||||| || |||||||||||||||||||||||||| |||||||    
T  1671629 tattgttttggtttttgtgtcagtacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 1671727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 7287173 - 7287077
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    ||||| || |||||||||||||||||||||||| |||||||||||||| |||||||||||| || ||||||||||| |||||||||||||| |||||    
T  7287173 tattgttttggtttttgtgtcactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 7287077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 28306116 - 28306020
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| ||| |||||| ||||||||||||| |||||||||||||| |||||||||||| || |||||||||||||||||||||||||| |||||    
T  28306116 tattgctttggtctttgtgccactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 28306020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 213 - 312
Target Start/End: Complemental strand, 28467437 - 28467338
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    ||||| || ||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||| ||||||||||| ||||||| |||||| ||||||||    
T  28467437 tattgttttggtttttgtgtcactgcctcatttcctttataaaattttggttgtcacaaaaattgtcacatatatgaatgttcagataacacaactcttt 28467338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 213 - 310
Target Start/End: Original strand, 5168270 - 5168367
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||| | |||||||| ||||||||||||| ||||||||||||||||||||||||||| || ||| ||||||| |||||||||||||| ||||||    
T  5168270 tattgctttgatttttgtgccactacctcattttctttgtaaaattttagttgtcacaaaagttgtcatatatatgaatgttcaaataacacaactct 5168367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 213 - 310
Target Start/End: Complemental strand, 14051299 - 14051202
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    ||||| || |||||||||| ||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||  ||||||| ||||||    
T  14051299 tattgttttggtttttgtgccactacctcattttctttgtaaaattttggttgtcacaaaagttatcacatatatggatgtttgaataacacaactct 14051202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 212 - 308
Target Start/End: Original strand, 1764310 - 1764406
Alignment:
Q  212 ttattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaact 308  Q
    ||||||||| ||||||| || |||||||||||||||||| ||||||||| |||||||||||| || ||||||||||| |||||||||||||| ||||    
T  1764310 ttattgctttggtttttatgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaact 1764406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 213 - 301
Target Start/End: Complemental strand, 7076552 - 7076464
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataa 301  Q
    |||||||| |||||||||| || ||| ||||||||||||||||||||| |||||||||||| || ||||||||||| ||||||||||||    
T  7076552 tattgctttggtttttgtgccattacttcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataa 7076464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 14923160 - 14923256
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| |||||||||| |||||||||||||| ||||||||||||| ||| |||| ||| || |||||||||| ||||||||||||||| |||||    
T  14923160 tattgctttggtttttgtgccactacctcatttcttttgtaaaattttggttttcacgaaagttgtcacatatatcgatgttcaaataacacaactc 14923256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 1274445 - 1274542
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||| ||||||||||||| || |||||| ||||||||||||||| |||| || |||| || |||||||||||||||||||||||||| |||||||    
T  1274445 tattgctttggtttttgtgtcaatatctcattccctttgtaaaattttggttg-cataaaagttgtcacatatatggatgttcaaataacacaactctt 1274542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 35646470 - 35646527
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 270  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35646470 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 35646527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 213 - 308
Target Start/End: Original strand, 13168609 - 13168704
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaact 308  Q
    |||| ||| |||||||||| ||||| ||||||||||||||||||||||  ||||||||||| || ||||||||||| ||||| |||||||| ||||    
T  13168609 tattactttggtttttgtgccactatctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatgaatgttgaaataacacaact 13168704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 15479556 - 15479652
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    ||||| || |||| || ||||| ||||||||||  |||||||||||||| ||||||||||| || |||||| ||||||||||||||||||| |||||    
T  15479556 tattgttttggttattttgtcaatacctcattttttttgtaaaattttaattgtcacaaaagttgtcacatttatggatgttcaaataacacaactc 15479652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 17626083 - 17626171
Alignment:
Q  223 gtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||||||| |||||||||| |||| ||||||||| |||||| ||||| || ||| ||| |||||||||||||||||| |||||||    
T  17626083 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 17626171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 212 - 303
Target Start/End: Original strand, 8686977 - 8687068
Alignment:
Q  212 ttattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataaca 303  Q
    |||||| || ||||||||||||| |||||||||| ||||||||||||||  |||| | |||| || ||||||||||| ||||||||||||||    
T  8686977 ttattgttttggtttttgtgtcaatacctcattttctttgtaaaattttgattgttataaaagttgtcacatatatgaatgttcaaataaca 8687068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 213 - 303
Target Start/End: Original strand, 2972411 - 2972501
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataaca 303  Q
    |||||||| | ||||||||||| |||||||||||||| || |||||||  ||||||||||| || ||||||||||  ||||||||||||||    
T  2972411 tattgctttgatttttgtgtcaatacctcatttccttcgtgaaattttgattgtcacaaaagttgtcacatatataaatgttcaaataaca 2972501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 224 - 313
Target Start/End: Complemental strand, 7552940 - 7552851
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttta 313  Q
    ||||||||||| ||| |||||| ||||| |||||||| |||||||||||| || |||  || |||||||||||||||||| |||||||||    
T  7552940 tttttgtgtcaatacatcattttctttgcaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaactcttta 7552851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 213 - 312
Target Start/End: Original strand, 22972204 - 22972303
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    ||||| || ||||||||| | | ||||| |||| ||||||||||||||||||||| ||||| || | | ||| |||||||||||||||||| ||||||||    
T  22972204 tattgttttggtttttgtattaataccttattttctttgtaaaattttagttgtctcaaaagttgttatataaatggatgttcaaataacacaactcttt 22972303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 243 - 310
Target Start/End: Complemental strand, 35634789 - 35634722
Alignment:
Q  243 tttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||||||||||||| ||| ||| |||| || |||||||||||||||||||||||||| ||||||    
T  35634789 tttcctttgtaaaattttggttatcataaaagttgtcacatatatggatgttcaaataacacaactct 35634722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 213 - 312
Target Start/End: Original strand, 39591767 - 39591866
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| ||||| ||||||| |  ||||||| |||||||||| ||| |||||||||||  || ||| ||| || ||||||||||||||| ||||||||    
T  39591767 tattgctttggtttgtgtgtcaatctctcattttctttgtaaaactttggttgtcacaaaggttgtcatataaatagatgttcaaataacacaactcttt 39591866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 213 - 312
Target Start/End: Original strand, 39592159 - 39592258
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| ||||| ||||||| |  ||||||| |||||||||| ||| |||||||||||  || ||| ||| || ||||||||||||||| ||||||||    
T  39592159 tattgctttggtttgtgtgtcaatctctcattttctttgtaaaactttggttgtcacaaaggttgtcatataaatagatgttcaaataacacaactcttt 39592258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 222 - 312
Target Start/End: Original strand, 13309979 - 13310069
Alignment:
Q  222 ggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    ||||||||||| | |||||||||| |||||||||| |||  ||||| |||||||| |||  || |||||||||||||||||| || |||||    
T  13309979 ggtttttgtgttaatacctcattttctttgtaaaaatttgattgtctcaaaaattgtcatctaaatggatgttcaaataacacaattcttt 13310069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 301
Target Start/End: Original strand, 18660846 - 18660933
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataa 301  Q
    |||||||| |||||||||| || ||| ||||||||||||||||| |||  |||| |||||| |||| ||||||||| |||||| |||||    
T  18660846 tattgctttggtttttgtgccaatacttcatttcctttgtaaaagtttgattgt-acaaaagttatgacatatatgaatgttcgaataa 18660933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 301
Target Start/End: Original strand, 27487974 - 27488062
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataa 301  Q
    |||||||| |||||||||| || ||  | |||| |||||||||||||||||| || |||||||||||| | | || |||||||||||||    
T  27487974 tattgctttggtttttgtgccaatatttaattttctttgtaaaattttagttatctcaaaaattatcataaaaatagatgttcaaataa 27488062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 33599061 - 33599137
Alignment:
Q  225 ttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataa 301  Q
    |||||||||| || ||| ||| ||||||||| || ||||||||| ||||||||||| ||| |||| |||||||||||    
T  33599061 ttttgtgtcaatatctctttttctttgtaaatttatagttgtcataaaaattatcatataaatggttgttcaaataa 33599137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 219 - 258
Target Start/End: Complemental strand, 39807691 - 39807652
Alignment:
Q  219 ttcggtttttgtgtcactacctcatttcctttgtaaaatt 258  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  39807691 ttcggtttttgtgtcagtacctcatttcctttgtaaaatt 39807652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 236 - 310
Target Start/End: Original strand, 3565194 - 3565268
Alignment:
Q  236 tacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||||| |||||||||||||| |||||| ||||| || ||||  |  ||||||||||||||||| ||||||    
T  3565194 tacctcattttctttgtaaaattttggttgtctcaaaagttgtcactcaagtggatgttcaaataacacaactct 3565268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 1079936 - 1079879
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 270  Q
    |||||||| || ||||||| || |||||||||| ||||||||||||||| ||||||||    
T  1079936 tattgctttggattttgtgccaatacctcattttctttgtaaaattttaattgtcaca 1079879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 308
Target Start/End: Original strand, 42175021 - 42175101
Alignment:
Q  226 tttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaact 308  Q
    ||||||||||||||  ||||||||| |||||||||   ||||| |||| ||  ||||||||| ||||||||||||||| ||||    
T  42175021 tttgtgtcactacc--atttcctttataaaattttgactgtcataaaagttgacacatatatcgatgttcaaataacacaact 42175101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 280
Target Start/End: Complemental strand, 25561000 - 25560935
Alignment:
Q  214 attgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatca 280  Q
    ||||||||||||||||||||| || ||| ||| |||| ||||||| | |||||| ||||||||||||    
T  25561000 attgcttcggtttttgtgtcaatatctc-ttttctttataaaattatggttgtcccaaaaattatca 25560935  T

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Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 250
Target Start/End: Complemental strand, 19521987 - 19521950
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttccttt 250  Q
    |||||||| | |||||||||||||||||||||||||||    
T  19521987 tattgctttgatttttgtgtcactacctcatttccttt 19521950  T

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Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 311
Target Start/End: Complemental strand, 42475606 - 42475558
Alignment:
Q  263 ttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    ||||| || ||||||||||||| |||| ||||||||||||| |||||||    
T  42475606 ttgtcccataaattatcacataaatggttgttcaaataacacaactctt 42475558  T

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Target: chr8 (Bit Score: 85; Significance: 2e-40; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 42768291 - 42768387
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42768291 tattgctttggtttttgtgtcactgcctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacacaactc 42768387  T

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Target: chr8; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 224 - 303
Target Start/End: Complemental strand, 32501169 - 32501090
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataaca 303  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  32501169 tttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaaattctcacatatatggatgttcaaataaca 32501090  T

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Target: chr8; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 12898913 - 12898815
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||| |||||||| | ||||| |||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||| |||||||    
T  12898913 tattgctttggtttttgcgccactatctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacataactctt 12898815  T

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Target: chr8; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 225 - 305
Target Start/End: Original strand, 36251425 - 36251505
Alignment:
Q  225 ttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacaga 305  Q
    ||||||||||||||||||||||||||||||||||||  ||||||| ||| |||||||||||||||||||||||||||||||    
T  36251425 ttttgtgtcactacctcatttcctttgtaaaattttgattgtcacgaaagttatcacatatatggatgttcaaataacaga 36251505  T

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Target: chr8; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 213 - 312
Target Start/End: Complemental strand, 37449409 - 37449310
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| ||||||||||  |||||||||||||||||||||||||||  || |||||||| ||||||||||||||||| ||||||||||| ||||||||    
T  37449409 tattgctttggtttttgtgctactacctcatttcctttgtaaaattttgattatcacaaaagttatcacatatatggatattcaaataacacaactcttt 37449310  T

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Target: chr8; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 213 - 303
Target Start/End: Complemental strand, 5277483 - 5277393
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataaca 303  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||  |||||||| ||||| |||||| |||||||||||||||||||    
T  5277483 tattgcttaagtttttgtgtcactacctcatttcctttgtaaaattttgattgtcacataaattgtcacatgtatggatgttcaaataaca 5277393  T

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Target: chr8; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 27325845 - 27325943
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||  || |||| ||| || |||||||||||||||||||||||||| |||||||    
T  27325845 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttgattatcacgaaagttgtcacatatatggatgttcaaataacacaactctt 27325943  T

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Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 213 - 310
Target Start/End: Original strand, 34186694 - 34186791
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||| ||| |||||||||||||||||||||||||||||| ||||||||  ||||||||||| || |||||| ||||||||||||||||||| ||||||    
T  34186694 tattactttggtttttgtgtcactacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatgtatggatgttcaaataacacaactct 34186791  T

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Target: chr8; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 212 - 309
Target Start/End: Complemental strand, 4054271 - 4054174
Alignment:
Q  212 ttattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| ||||  ||||||||||| || ||||||||||  |||||||||||||| |||||    
T  4054271 ttattgctttggtttttgtgtcactacctcatttcatttgtaaagttttgattgtcacaaaagttgtcacatatataaatgttcaaataacacaactc 4054174  T

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Target: chr8; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 22719527 - 22719623
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| ||||||||||  |||||||||||| |||||||||||||| ||| |||||||| || |||||||||||| ||||||||||||| |||||    
T  22719527 tattgctttggtttttgtgcaactacctcattttctttgtaaaattttggttatcacaaaagttgtcacatatatggctgttcaaataacacaactc 22719623  T

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Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 226 - 310
Target Start/End: Original strand, 24479323 - 24479407
Alignment:
Q  226 tttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| |||||| ||||||| ||| |||||||||| ||||||    
T  24479323 tttgtgtcaatatctcatttcctttgtaaaattttagttgtcacaaaagttatcatatatatgaatgctcaaataacacaactct 24479407  T

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Target: chr8; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 213 - 310
Target Start/End: Original strand, 29025347 - 29025444
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||| ||||||||||||| |||||||||| |||||||||||||| |||||| ||||| || ||| ||| ||||||||| |||||||| ||||||    
T  29025347 tattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgtttaaataacacaactct 29025444  T

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Target: chr8; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 7271937 - 7272033
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| |||||||||||||||| |||||||| |||| ||||||||  ||||||||||| || |||||| |||||||||||| |||||| |||||    
T  7271937 tattgctttggtttttgtgtcactatctcatttcttttgcaaaattttgattgtcacaaaagttgtcacatgtatggatgttcatataacacaactc 7272033  T

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Target: chr8; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 213 - 308
Target Start/End: Complemental strand, 36660434 - 36660339
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaact 308  Q
    |||||||| |||| |||||||| ||| |||||| |||| |||||||||  ||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  36660434 tattgctttggttattgtgtcaatacttcattttctttataaaattttgattgtcacaaaagttatcacatttatggatgttcaaataacacaact 36660339  T

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Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 213 - 310
Target Start/End: Complemental strand, 11253526 - 11253429
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||| ||||||||||||| |||||||||| |||||||||||||| || ||||||||| || ||| || ||| ||||||||||||| | ||||||    
T  11253526 tattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggtcgtcacaaaagttgtcatatttatagatgttcaaataatacaactct 11253429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 213 - 317
Target Start/End: Complemental strand, 10839466 - 10839362
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| |||||||||| || ||  | |||| ||||||||||||||||||||| |||||||||||| | | ||||||||||||||||||  ||||||     
T  10839466 tattgctttggtttttgtgccaatatttaattttctttgtaaaattttagttgtctcaaaaattatcataaaaatggatgttcaaataacactactctta 10839367  T
Q  313 aaaaa 317  Q
    |||||    
T  10839366 aaaaa 10839362  T

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Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 213 - 312
Target Start/End: Original strand, 43397868 - 43397967
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||| ||| |||||||||| ||||| ||||||| |||||||||||||| ||||||||||||  | |||||| ||||||||||||| ||||| | ||||||    
T  43397868 tattactttggtttttgtgccactatctcattttctttgtaaaattttggttgtcacaaaagctgtcacatgtatggatgttcaattaacacatctcttt 43397967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 213 - 310
Target Start/End: Original strand, 34639620 - 34639717
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||| ||| |||| |||||||||||||||||||  |||||||||||||  || || ||||||||||||  || |||||||||||||||||| ||||||    
T  34639620 tattactttggttattgtgtcactacctcattttatttgtaaaattttgattctctcaaaaattatcatgtaaatggatgttcaaataacataactct 34639717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 213 - 313
Target Start/End: Complemental strand, 37133846 - 37133746
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| | ||||||||||| ||  |||||| |||||||||||||| |||||||||||| || |||  || ||||||||| |||||||| ||||||||    
T  37133846 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttggttgtcacaaaagttgtcatctaaatggatgttaaaataacacaactcttt 37133747  T
Q  313 a 313  Q
    |    
T  37133746 a 37133746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 31249508 - 31249451
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 270  Q
    |||||||| |||||||||  |||||||||||||||||||||||||||| |||||||||    
T  31249508 tattgctttggtttttgtaccactacctcatttcctttgtaaaattttggttgtcaca 31249451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 213 - 303
Target Start/End: Complemental strand, 36816600 - 36816510
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataaca 303  Q
    |||||||| | ||||||||| | ||| |||||| ||||| ||||||||  || |||||||| || |||||||||| |||||||||||||||    
T  36816600 tattgctttgatttttgtgttaatacgtcattttctttgcaaaattttgattatcacaaaagttgtcacatatatagatgttcaaataaca 36816510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 308
Target Start/End: Original strand, 32133425 - 32133505
Alignment:
Q  228 tgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaact 308  Q
    ||||||| ||||| ||||  ||||||||||||| ||| || ||||| |||||| ||| |||||||||||||||||| ||||    
T  32133425 tgtgtcaataccttattttatttgtaaaattttggttatctcaaaatttatcatataaatggatgttcaaataacacaact 32133505  T

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Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 312
Target Start/End: Original strand, 13106567 - 13106666
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| | ||||||||||| |||||| ||| ||||||||| || | ||||| | |||| || |||| || |||| ||||||||||||| ||||||||    
T  13106567 tattgctttgctttttgtgtcaatacctctttttctttgtaaatttatggttgttataaaagttgtcacctaaatggttgttcaaataacacaactcttt 13106666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 10731633 - 10731690
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 270  Q
    |||||||| | ||||||||||| ||| |||||||||||||||||||||  ||||||||    
T  10731633 tattgctttgatttttgtgtcaatacttcatttcctttgtaaaattttgattgtcaca 10731690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 268
Target Start/End: Original strand, 2883286 - 2883330
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgtaaaattttagttgtca 268  Q
    ||||||||| | ||| |||||| ||||||||||||||||||||||    
T  2883286 tttttgtgttaatacttcattttctttgtaaaattttagttgtca 2883330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 268
Target Start/End: Complemental strand, 3151280 - 3151236
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgtaaaattttagttgtca 268  Q
    ||||||||| | ||| |||||| ||||||||||||||||||||||    
T  3151280 tttttgtgttaatacttcattttctttgtaaaattttagttgtca 3151236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 310
Target Start/End: Original strand, 10692551 - 10692615
Alignment:
Q  246 cctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||||||||||  |||||| | || ||  ||||||||||||||||||||||| | ||||||    
T  10692551 cctttgtaaaattttgattgtcagagaagttgacacatatatggatgttcaaataatacaactct 10692615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 280
Target Start/End: Complemental strand, 12734984 - 12734928
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatca 280  Q
    ||||||||||| |||||  ||| | ||||||| |||||||||||||| |||||||||    
T  12734984 tttttgtgtcaatacctacttttcattgtaaatttttagttgtcacataaattatca 12734928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 4e-39; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 213 - 319
Target Start/End: Complemental strand, 52254122 - 52254016
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||| |    
T  52254122 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattgtcacatatatggatgttcaaatgacacaactctat 52254023  T
Q  313 aaaaata 319  Q
     ||||||    
T  52254022 caaaata 52254016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 42357068 - 42356972
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||    
T  42357068 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 42356972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 212 - 309
Target Start/End: Complemental strand, 32924266 - 32924169
Alignment:
Q  212 ttattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||| |||||    
T  32924266 ttattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 32924169  T

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Target: chr3; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 213 - 313
Target Start/End: Complemental strand, 27541486 - 27541386
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||| ||||||||    
T  27541486 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 27541387  T
Q  313 a 313  Q
    |    
T  27541386 a 27541386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 36670998 - 36670902
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||    
T  36670998 tattgctttggtttttgtgccactacctcatttcatttgtaaaattttggttgtcacaaaagttatcacatatatggatgttcaaataacacaactc 36670902  T

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Target: chr3; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 212 - 309
Target Start/End: Original strand, 7934061 - 7934157
Alignment:
Q  212 ttattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    ||||||||| ||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  7934061 ttattgctttggttttt-tgtcactatctcatatcctttgtaaaattttagttgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 7934157  T

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Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 212 - 309
Target Start/End: Complemental strand, 44413380 - 44413283
Alignment:
Q  212 ttattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||| || |||||||||| ||||||||||||||| |||||    
T  44413380 ttattgcttcggtttttgtgccaatacctcatttcctttgtaaaattttaattgtcacaaaagttgtcacatatatagatgttcaaataacacaactc 44413283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 213 - 310
Target Start/End: Original strand, 52939738 - 52939835
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||| |||||||| ||| || |||||||||||||||||||||||||| ||||||    
T  52939738 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacgaaagttgtcacatatatggatgttcaaataacacaactct 52939835  T

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Target: chr3; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 213 - 313
Target Start/End: Original strand, 33939325 - 33939425
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| ||||||||||||||||| |||||||||||| | |||||| |||||||||||| || |||||||||||||||||||||||||| ||||||||    
T  33939325 tattgctttggtttttgtgtcactacttcatttcctttgaataattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 33939424  T
Q  313 a 313  Q
    |    
T  33939425 a 33939425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 213 - 313
Target Start/End: Original strand, 38926715 - 38926815
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||| ||| || |||||||||| ||||||||||||||| ||||||||    
T  38926715 tattgctttggtttttgtgtcactaccttatttcctttgtaaaattttggttgtcacgaaagttgtcacatatatagatgttcaaataacacaactcttt 38926814  T
Q  313 a 313  Q
    |    
T  38926815 a 38926815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 213 - 303
Target Start/End: Original strand, 5244316 - 5244406
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataaca 303  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||  ||||||||||||||    
T  5244316 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatataaatgttcaaataaca 5244406  T

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Target: chr3; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 46623994 - 46624092
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    ||||| || |||||||||||||||||||||||| ||||||||||||||  ||||||||||| ||||||||| ||||||||||||||||||| |||||||    
T  46623994 tattgttttggtttttgtgtcactacctcattttctttgtaaaattttgattgtcacaaaagttatcacatgtatggatgttcaaataacacaactctt 46624092  T

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Target: chr3; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 309
Target Start/End: Complemental strand, 16969539 - 16969454
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||    
T  16969539 tttttatgccactacctcatttcctttgtaaaattttagttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 16969454  T

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Target: chr3; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 212 - 309
Target Start/End: Original strand, 19149076 - 19149173
Alignment:
Q  212 ttattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||| || |||||||||| ||||| ||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||||||| |||||    
T  19149076 ttattgttttggtttttgtgccactaactcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 19149173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 213 - 310
Target Start/End: Original strand, 41309204 - 41309301
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||| | |||||||||||||||||||||| ||||||||||||||  ||||||||||| ||||| ||||||||||||||||||||||| ||||||    
T  41309204 tattgctttgatttttgtgtcactacctcattttctttgtaaaattttgattgtcacaaaagttatcgcatatatggatgttcaaataacacaactct 41309301  T

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Target: chr3; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 47472426 - 47472512
Alignment:
Q  223 gtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||| || |||||||||| ||||||||||||||| |||||    
T  47472426 gtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacataactc 47472512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 224 - 312
Target Start/End: Original strand, 44856051 - 44856139
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| |||||||||||||||||||||||||||| ||||||| | || || |||||||||||||||||||||||||| ||||||||    
T  44856051 tttttgtgccactacctcatttcctttgtaaaattttggttgtcatacaagttgtcacatatatggatgttcaaataacacaactcttt 44856139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 213 - 312
Target Start/End: Original strand, 5114165 - 5114264
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| | |||||||||||||||||||||| ||||||||||||||  |||||| ||||||| ||||||| || ||||||||||||||| ||||||||    
T  5114165 tattgctttgatttttgtgtcactacctcattttctttgtaaaattttgattgtcataaaaattgtcacataaatagatgttcaaataacacaactcttt 5114264  T

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Target: chr3; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 213 - 308
Target Start/End: Original strand, 35597249 - 35597344
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaact 308  Q
    ||||| || |||||||||||||||||||| |||||||||||||||||| |||||||||||| || ||||||||||| || ||||||||||| ||||    
T  35597249 tattgttttggtttttgtgtcactacctcgtttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatattcaaataacacaact 35597344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 213 - 303
Target Start/End: Complemental strand, 42358622 - 42358532
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataaca 303  Q
    |||||||| | ||||||||||| |||||||||||||||| ||||||||  ||||||||||| || ||||||||||||||||||||||||||    
T  42358622 tattgctttgatttttgtgtcaatacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataaca 42358532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 213 - 314
Target Start/End: Complemental strand, 13348118 - 13348017
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| ||||||||| ||| |||||||||| |||||||||||||| |||||| ||||| || ||| ||| |||||||||||||||||| ||||||||    
T  13348118 tattgctttggtttttgtatcaatacctcattttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgttcaaataacataactcttt 13348019  T
Q  313 aa 314  Q
    ||    
T  13348018 aa 13348017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 232 - 309
Target Start/End: Original strand, 13735836 - 13735913
Alignment:
Q  232 tcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||||||||||||||| |||||||| |||||||||||| || |||||||||||||||||||||||||| |||||    
T  13735836 tcactacctcatttcctttgcaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 13735913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 37503731 - 37503635
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| | ||||||||||| || ||||||||||||| |||||||| |||||||||||| |||||||||||||  |||||||||||||| |||||    
T  37503731 tattgctttgatttttgtgtcaatatctcatttcctttgcaaaattttggttgtcacaaaagttatcacatatataaatgttcaaataacacaactc 37503635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 216 - 315
Target Start/End: Complemental strand, 55151698 - 55151599
Alignment:
Q  216 tgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctttaaa 315  Q
    ||||| ||||||||||||| ||| |||||||||||||||||||||| |||| |||||| || ||||||||||  |||||||||||||| |||||| ||||    
T  55151698 tgctttggtttttgtgtcaatacttcatttcctttgtaaaattttaattgtaacaaaagttgtcacatatataaatgttcaaataacacaactctataaa 55151599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 44813223 - 44813321
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||| |||||||||| |||||||| |||||||||||||||||||  ||| ||||||| || |||||||||| ||||||||||| ||| |||||||    
T  44813223 tattgcttgggtttttgtgccactacctaatttcctttgtaaaattttgattgccacaaaagttgtcacatatatagatgttcaaatcacacaactctt 44813321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 288813 - 288909
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| |||||||||||||||| |||||||| |||||||||||||  |||| |||| | || |||||||||||||| ||||||||||| |||||    
T  288813 tattgctttggtttttgtgtcactatctcatttcttttgtaaaattttgattgttacaatagttgtcacatatatggattttcaaataacacaactc 288909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 224 - 308
Target Start/End: Complemental strand, 24256744 - 24256660
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaact 308  Q
    ||||||| ||| |||||||||||||||||||||||||| ||||||||||| || |||||||||| ||| ||||||||||| ||||    
T  24256744 tttttgtatcaatacctcatttcctttgtaaaattttaattgtcacaaaagttgtcacatatatagattttcaaataacacaact 24256660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 213 - 312
Target Start/End: Original strand, 37302633 - 37302732
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||| ||| |||||||||| ||||||||||||||||||| ||||||||  ||||||||||| || ||| || ||||||||||||||||| | ||||||||    
T  37302633 tattactttggtttttgtgccactacctcatttcctttgcaaaattttgattgtcacaaaagttgtcaaatgtatggatgttcaaataagacaactcttt 37302732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 213 - 286
Target Start/End: Complemental strand, 20547974 - 20547901
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatata 286  Q
    |||||||| | |||||||| |||||||||||||||||||||||||||| |||||||||||| || |||||||||    
T  20547974 tattgctttgatttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatata 20547901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 41505578 - 41505635
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 270  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41505578 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcaca 41505635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 21217609 - 21217697
Alignment:
Q  223 gtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||||||| |||||||||| |||| ||||||||| |||||| ||||| || ||| ||| |||||||||||||||||| |||||||    
T  21217609 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 21217697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 26014899 - 26014995
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    ||||| || |||||||||| |  ||||||||||||||||||||||||| |||||||||||| || |||||| ||| |||||| |||||||| |||||    
T  26014899 tattgttttggtttttgtgcccttacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatgtatagatgtttaaataacacaactc 26014995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 236 - 312
Target Start/End: Complemental strand, 31157638 - 31157562
Alignment:
Q  236 tacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    ||||| |||||||||||||||||||  | |||||| || ||||||||||||||||||||||||||||| ||||||||    
T  31157638 tacctaatttcctttgtaaaattttgatagtcacagaagttatcacatatatggatgttcaaataacacaactcttt 31157562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 37057031 - 37056943
Alignment:
Q  223 gtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||||||| |||||||||| ||||||||||| || |||||| ||||| || ||| ||| |||||||||||||||||| |||||||    
T  37057031 gtttttgtgtcaatacctcattttctttgtaaaatattggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 37056943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 236 - 311
Target Start/End: Original strand, 52326129 - 52326204
Alignment:
Q  236 tacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||||||||||||||||||||  |||||| |||| || ||| |||||||||||||||||||||| |||||||    
T  52326129 tacctcatttcctttgtaaaattttgattgtcataaaagttgtcatatatatggatgttcaaataacacaactctt 52326204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 35377065 - 35376967
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||| | |||||||| || ||| |||||| |||||||||||||| |||||||||||| || |||  || |||||||||||||||||| |||||||    
T  35377065 tattgctttgatttttgtgccaatacatcattttctttgtaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaactctt 35376967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 51982186 - 51982284
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    ||||||||  |||||||||||| ||||| |||| |||| |||||||||||||||| |||||||| | | ||| |||||| ||||||||||| |||||||    
T  51982186 tattgctttagtttttgtgtcaataccttattttctttataaaattttagttgtctcaaaaattgttatataaatggattttcaaataacacaactctt 51982284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 23592555 - 23592640
Alignment:
Q  223 gtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaact 308  Q
    |||||||||||| |||||||||| |||| ||||||||| |||||| ||||| || ||| ||| |||||||||||||||||| ||||    
T  23592555 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 23592640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 213 - 312
Target Start/End: Complemental strand, 7668171 - 7668073
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| ||||||| || ||||| || |||||||| | |||||||| |||||||||||| || |||||| ||||||||||||||||||| || |||||    
T  7668171 tattgctttggtttttatgccactatcttatttcctt-gcaaaattttggttgtcacaaaagttgtcacatgtatggatgttcaaataacacaattcttt 7668073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 224 - 311
Target Start/End: Original strand, 44383287 - 44383374
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    ||||||||||| |||||||||| |||| |||||||||  ||||| ||||| || ||| ||| |||||||||||||||||| |||||||    
T  44383287 tttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 44383374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 213 - 303
Target Start/End: Original strand, 8847197 - 8847286
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataaca 303  Q
    ||||| || |||||||||| || ||||||||||  |||||||||||||  || |||||||| || | ||||||||||||||||||||||||    
T  8847197 tattgttttggtttttgtgccaatacctcattttatttgtaaaattttgattatcacaaaagttgt-acatatatggatgttcaaataaca 8847286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 213 - 303
Target Start/End: Complemental strand, 11630734 - 11630644
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataaca 303  Q
    |||| ||| ||||||| | ||| ||| |||||| ||||||||||||||| ||||| |||||||| ||| ||| ||| ||||||||||||||    
T  11630734 tattactttggtttttatatcaatacttcattttctttgtaaaattttaattgtctcaaaaattgtcatataaatgaatgttcaaataaca 11630644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 239 - 312
Target Start/End: Original strand, 44445407 - 44445480
Alignment:
Q  239 ctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    ||||||| |||| ||||||||| ||||||| |||| || | |||||||| ||||||||||||||| ||||||||    
T  44445407 ctcattttctttataaaattttggttgtcataaaagttgttacatatatcgatgttcaaataacataactcttt 44445480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 49780724 - 49780628
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| |||||||||| || |||||| ||| ||||||||| || | ||||||| |||||||||||| || || | | ||||||||||| |||||    
T  49780724 tattgctttggtttttgtgccaatacctccttttctttgtaaatttatggttgtcataaaaattatcacttaaatagttattcaaataacacaactc 49780628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 308
Target Start/End: Complemental strand, 35201418 - 35201323
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaact 308  Q
    ||||| || ||||||||||||| || || |||| ||||||| ||||||| ||||| ||||| || |||  || |||||||||||||||||| ||||    
T  35201418 tattgttttggtttttgtgtcaatatcttattttctttgtataattttaattgtctcaaaagttgtcatttaaatggatgttcaaataacacaact 35201323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 45000150 - 45000197
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaatttt 260  Q
    ||||| || |||||||||| ||||||||||||||||||||||||||||    
T  45000150 tattgatttggtttttgtgccactacctcatttcctttgtaaaatttt 45000197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 236 - 308
Target Start/End: Original strand, 23600703 - 23600775
Alignment:
Q  236 tacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaact 308  Q
    ||| |||||| |||| ||||||||| |||||| ||||| || ||| ||| |||||||||||||||||| ||||    
T  23600703 tacntcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 23600775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 223 - 312
Target Start/End: Complemental strand, 25641557 - 25641468
Alignment:
Q  223 gtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    ||||||||| || ||||| |||| || ||||||| ||| |||||| ||||| || ||| ||| |||||||||||||||| | ||||||||    
T  25641557 gtttttgtgccaataccttattttctatgtaaaactttggttgtctcaaaagttgtcatataaatggatgttcaaataatacaactcttt 25641468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 44413906 - 44413849
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 270  Q
    |||||||| ||||||||||||| || ||||||| ||||||||||||||  ||||||||    
T  44413906 tattgctttggtttttgtgtcaatatctcattttctttgtaaaattttgattgtcaca 44413849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 50318361 - 50318316
Alignment:
Q  225 ttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 270  Q
    ||||||| ||||| |||||||||||||||||||||| |||||||||    
T  50318361 ttttgtgccactatctcatttcctttgtaaaattttggttgtcaca 50318316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 308
Target Start/End: Complemental strand, 28539697 - 28539629
Alignment:
Q  240 tcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaact 308  Q
    |||||| ||||| |||||||| ||| |||||||| ||||||  || |||||||||||||||||| ||||    
T  28539697 tcattttctttgcaaaattttggttatcacaaaagttatcatctaaatggatgttcaaataacacaact 28539629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 255 - 312
Target Start/End: Original strand, 42478086 - 42478145
Alignment:
Q  255 aattttagttgtcacaaaaattatcacatat--atggatgttcaaataacagaactcttt 312  Q
    |||||| |||||||||||| |||||| ||||  |||||||||||||||||| ||||||||    
T  42478086 aattttggttgtcacaaaagttatcatatatatatggatgttcaaataacacaactcttt 42478145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 266
Target Start/End: Original strand, 32205682 - 32205735
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgt 266  Q
    |||||||| ||||||||  ||||||| |||||| |||| |||||||||||||||    
T  32205682 tattgctttggtttttgcatcactacttcattttctttataaaattttagttgt 32205735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 310
Target Start/End: Complemental strand, 39630577 - 39630504
Alignment:
Q  237 acctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||| |||| ||||||||||||||  |||||  ||||||||| | ||| || ||||||||||||||| ||||||    
T  39630577 acctaattttctttgtaaaattttgattgtcttaaaaattattatataaatagatgttcaaataacaaaactct 39630504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 45711423 - 45711363
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaa 273  Q
    ||||| || |||| |||||||| ||| |||||| |||||||||||||| ||||| ||||||    
T  45711423 tattgttttggttattgtgtcaatacttcattttctttgtaaaattttggttgttacaaaa 45711363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 266
Target Start/End: Complemental strand, 49087082 - 49087038
Alignment:
Q  222 ggtttttgtgtcactacctcatttcctttgtaaaattttagttgt 266  Q
    ||||||||||||| |||||||||| ||||| |||||||| |||||    
T  49087082 ggtttttgtgtcaatacctcattttctttgaaaaattttggttgt 49087038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 6e-38; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 26469446 - 26469542
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||| |||||    
T  26469446 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 26469542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 213 - 312
Target Start/End: Original strand, 649856 - 649955
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||| ||||||||||||||||| ||||||||    
T  649856 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatgtggatgttcaaataacacaactcttt 649955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 212 - 303
Target Start/End: Original strand, 45333797 - 45333888
Alignment:
Q  212 ttattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataaca 303  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  45333797 ttattgctttgatttttgtgtcactacctcatttcctttgtaaaattttaattgtcacaaaaattatcacatatatagatgttcaaataaca 45333888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 27465041 - 27464943
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||| |||||||    
T  27465041 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 27464943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 37685416 - 37685512
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||| |||||||||||||| |||||    
T  37685416 tattgctttgatttttgtgtcactacctcatttcttttgtaaaattttaattgtcacaaaaattatcacatgtatgaatgttcaaataacataactc 37685512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 37700102 - 37700006
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||| |||||||||||||| |||||    
T  37700102 tattgctttgatttttgtgtcactacctcatttcttttgtaaaattttaattgtcacaaaaattatcacatgtatgaatgttcaaataacataactc 37700006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 213 - 312
Target Start/End: Complemental strand, 19055743 - 19055644
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    ||||| || |||||||||| || || ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||    
T  19055743 tattgttttggtttttgtgacaatatctcatttcctttgtaaaattttagttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 19055644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 31088268 - 31088366
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||| |||||||||| |||||||||||||  ||||||||||||| |||||||||||| || |||||||||||||||||||||||||| |||||||    
T  31088268 tattgctttggtttttgtgccactacctcattttttttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 31088366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 213 - 303
Target Start/End: Original strand, 35369787 - 35369877
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataaca 303  Q
    |||||||| | ||||||||||||||||||||||||||| ||||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  35369787 tattgctttgatttttgtgtcactacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataaca 35369877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 213 - 319
Target Start/End: Complemental strand, 37275017 - 37274911
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||  ||||||||||| || |||||| || |||||||||||||||| ||||||||    
T  37275017 tattgctttggtttttgtgtcactacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatgtaaggatgttcaaataacacaactcttt 37274918  T
Q  313 aaaaata 319  Q
    || ||||    
T  37274917 aataata 37274911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 45121464 - 45121367
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||| |||||||||| |||||| ||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||| |||||||    
T  45121464 tattgctttggtttttgtgccactac-tcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 45121367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 213 - 318
Target Start/End: Original strand, 23645498 - 23645603
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    ||||| || |||||||||| |||||||||||||||||||||||||||| |||||||||||| || | ||||||||| |||||||||||||| ||||||||    
T  23645498 tattgttttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatgtatgttcaaataacataactcttt 23645597  T
Q  313 aaaaat 318  Q
     |||||    
T  23645598 caaaat 23645603  T

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Target: chr1; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 224 - 309
Target Start/End: Complemental strand, 50726221 - 50726136
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| ||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  50726221 tttttgtgccactacctcattttctttgcaaaattttggttgtcacaaaaattatcacatatatggatgttcaaataacacaactc 50726136  T

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Target: chr1; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 224 - 310
Target Start/End: Original strand, 33100906 - 33100992
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||| || ||||||||||| |||||||||||||| ||||||    
T  33100906 tttttgtgtcactacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactct 33100992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 213 - 303
Target Start/End: Original strand, 50932391 - 50932481
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataaca 303  Q
    |||||||| | ||||||||||| ||||||||||||||||||||||||| ||||| |||||| || ||||||||||||||||||||||||||    
T  50932391 tattgctttgatttttgtgtcaatacctcatttcctttgtaaaattttggttgtaacaaaagttgtcacatatatggatgttcaaataaca 50932481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 44914556 - 44914459
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcac-aaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||  ||||| | ||||||| |||||||||||||||||||||||||| |||||    
T  44914556 tattgctttagtttttgtgtcactacctcatttcctttgtaaaattttgattgtcgcaaaaaattgtcacatatatggatgttcaaataacacaactc 44914459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 8350182 - 8350087
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| ||||||||||||||||||| |||||||||||||| |||| |||||||| ||| || |||||||||||||||||||||||||| |||||    
T  8350182 tattgctttggtttttgtgtcactaccttatttcctttgtaaa-ttttggttgtcacgaaagttgtcacatatatggatgttcaaataacacaactc 8350087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 213 - 303
Target Start/End: Original strand, 3851245 - 3851335
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataaca 303  Q
    ||||| || ||||||| ||||||||||||||||||||| ||||||||| ||||||| |||| || ||||||||||||||||||||||||||    
T  3851245 tattgttttggtttttctgtcactacctcatttcctttataaaattttggttgtcataaaagttgtcacatatatggatgttcaaataaca 3851335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 224 - 309
Target Start/End: Original strand, 37619642 - 37619727
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| || ||||||||||||||||||||||||| ||||| | |||| || |||||||||||||||||||||||||| |||||    
T  37619642 tttttgtgccaatacctcatttcctttgtaaaattttggttgtaataaaagttgtcacatatatggatgttcaaataacataactc 37619727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 15470040 - 15469945
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    ||||| || |||||||| |  ||||||||||||||||| |||||||||| ||||||| |||||||||||||||||| |||||||||||||| |||||    
T  15470040 tattgttttggtttttgcgctactacctcatttcctttataaaattttaattgtcac-aaaattatcacatatatgaatgttcaaataacacaactc 15469945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 44519135 - 44519039
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| | ||||||||  | ||||||||||||||||||||||||| ||| |||||||| || ||||||||||| |||||||||||||| |||||    
T  44519135 tattgctttgatttttgtgctaatacctcatttcctttgtaaaattttggttatcacaaaagttgtcacatatatgaatgttcaaataacacaactc 44519039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 48470726 - 48470822
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    ||||| || ||||| |||| || || ||||||||||||||||||||||  ||||||||||| || |||||||||||||||||||||||||| |||||    
T  48470726 tattgttttggtttctgtgccaatatctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 48470822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 213 - 310
Target Start/End: Complemental strand, 52576286 - 52576188
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatgga-tgttcaaataacagaactct 310  Q
    |||||||| |||||||||| |  ||||||||||||||||||||||||| |||||||||||| || |||| |||||| | ||||||||||||| ||||||    
T  52576286 tattgctttggtttttgtgccggtacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacctatatgaattgttcaaataacacaactct 52576188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 222 - 311
Target Start/End: Original strand, 21401494 - 21401583
Alignment:
Q  222 ggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    ||||||||||||| |||||||||| ||||||||||||||  ||||  ||||| || ||||||| |||||||||||||||||| |||||||    
T  21401494 ggtttttgtgtcaatacctcattttctttgtaaaattttgattgtttcaaaagttgtcacataaatggatgttcaaataacacaactctt 21401583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 222 - 303
Target Start/End: Complemental strand, 40861237 - 40861156
Alignment:
Q  222 ggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataaca 303  Q
    |||||||||| ||||| || ||||||||| |||||||||||||||||||||| ||  ||||||||| |||||||||||||||    
T  40861237 ggtttttgtgccactatcttatttcctttataaaattttagttgtcacaaaagttgacacatatatagatgttcaaataaca 40861156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 234 - 310
Target Start/End: Complemental strand, 30735256 - 30735180
Alignment:
Q  234 actacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||||||| |||| |||||||||  |||||||||||||||||||||| |||||| ||||||||||| ||||||    
T  30735256 actacctcatttactttataaaattttgattgtcacaaaaattatcacatacatggatattcaaataacacaactct 30735180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 213 - 312
Target Start/End: Complemental strand, 18512327 - 18512228
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    ||||||||  |||||| ||||| |||||||||| |||| ||||||||||||||||  ||||||||||| ||| || |||||| |||||||| ||||||||    
T  18512327 tattgctttagtttttatgtcaatacctcattttctttataaaattttagttgtcttaaaaattatcatataaattgatgttgaaataacacaactcttt 18512228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 224 - 312
Target Start/End: Complemental strand, 51718599 - 51718515
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    ||||||||||||||| |||||||||||||||| |||||||| |||||||| || ||||    |||||||||||||||||| ||||||||    
T  51718599 tttttgtgtcactacttcatttcctttgtaaagttttagttatcacaaaagttgtcac----atggatgttcaaataacacaactcttt 51718515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 224 - 309
Target Start/End: Original strand, 2571733 - 2571819
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgt-aaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||||||||||||||||| |||||| |||||||| |||||||||||| || ||| ||  |||||||||||||||||| |||||    
T  2571733 tttttgtgtcactacctcattttctttgttaaaattttggttgtcacaaaagttgtcatatgcatggatgttcaaataacacaactc 2571819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 3982010 - 3981914
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    ||||| || |||| |||||||| || ||||||| ||||||||||||||  ||||||||||  || |||||| ||||||||||||||||||| |||||    
T  3982010 tattgttttggttattgtgtcaatatctcattttctttgtaaaattttgattgtcacaaatgttgtcacatttatggatgttcaaataacacaactc 3981914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 213 - 312
Target Start/End: Original strand, 45640389 - 45640487
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| | |||||||| || || |||||||| ||||||||||||| ||||  |||||| || |||||||||| ||||||||||||||| ||||||||    
T  45640389 tattgctttgatttttgtgccaatatctcatttc-tttgtaaaattttggttgcaacaaaagttgtcacatatatagatgttcaaataacacaactcttt 45640487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 46907292 - 46907380
Alignment:
Q  223 gtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||||||| |||||||||| |||| |||||||||  ||||| ||||| || ||  ||| |||||||||||||||||| |||||||    
T  46907292 gtttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaagttgtcgtataaatggatgttcaaataacacaactctt 46907380  T

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Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 51571330 - 51571234
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| ||||||||||||| |||||| ||| |||||||||||| | |||||| |||||||| |||   | |||| ||||||||||||| |||||    
T  51571330 tattgctttggtttttgtgtcaatacctctttttctttgtaaaattatggttgtcccaaaaattgtcaatcaaatggttgttcaaataacacaactc 51571234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 213 - 283
Target Start/End: Complemental strand, 8828105 - 8828035
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacat 283  Q
    |||||||| |||||||||| || ||||||||||| ||| ||||||||| |||||| |||||||| ||||||    
T  8828105 tattgctttggtttttgtgccaatacctcatttcttttataaaattttggttgtcgcaaaaattgtcacat 8828035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 9566944 - 9566846
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||| ||||||||||||| ||||  |||| || ||||||||||| |||||| ||||| || ||| |||  || |||||||||||||| |||||||    
T  9566944 tattgctttggtttttgtgtcaataccctattttctatgtaaaattttggttgtctcaaaagttgtcatataattgaatgttcaaataacacaactctt 9566846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 12657309 - 12657367
Alignment:
Q  213 tattgcttcggtttttgtgtc-actacctcatttcctttgtaaaattttagttgtcaca 270  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||| |||||||||    
T  12657309 tattgctttggtttttgtgtccactacctcatttcctttataaaattttggttgtcaca 12657367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 266
Target Start/End: Original strand, 3159463 - 3159516
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgt 266  Q
    ||||||||  ||||||||| |||||||||||||||||||||||||||| |||||    
T  3159463 tattgcttttgtttttgtgccactacctcatttcctttgtaaaattttggttgt 3159516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 312
Target Start/End: Original strand, 43775303 - 43775392
Alignment:
Q  223 gtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| ||| || ||||||| ||||||||||||||  |||||| |||| || ||||||||||| || ||||||||||| || |||||    
T  43775303 gtttttgtatcaatatctcattttctttgtaaaattttgattgtcataaaagttgtcacatatatgaatattcaaataacacaagtcttt 43775392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 301
Target Start/End: Complemental strand, 15083034 - 15082947
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataa 301  Q
    |||||||| ||||||||||||| ||| ||||||||||||||||| |||  |||| |||||| || | ||||||||| |||||| |||||    
T  15083034 tattgctttggtttttgtgtcaatacttcatttcctttgtaaaagtttgattgt-acaaaagttttgacatatatgaatgttcgaataa 15082947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 310
Target Start/End: Complemental strand, 10627783 - 10627697
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    ||||||| ||| |||| ||||| |||| |||||||||  ||||| |||||||| ||||||| ||  ||||| |||||||||||||||    
T  10627783 tttttgtatcaataccacattttctttataaaattttgtttgtctcaaaaattgtcacatagatatatgttgaaataacagaactct 10627697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 30467517 - 30467419
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||| | ||| ||||||| |  ||| ||| |||||||||| |||||||||||||||| || ||| |||  | ||||||||||||||| |||||||    
T  30467517 tattgctttgatttgtgtgtcaatctctcgttttctttgtaaaactttagttgtcacaaaagttgtcatataattagatgttcaaataacacaactctt 30467419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 266
Target Start/End: Complemental strand, 37985359 - 37985317
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgtaaaattttagttgt 266  Q
    |||||||| |||||||||||||||||| |||||||||||||||    
T  37985359 tttttgtgacactacctcatttcctttataaaattttagttgt 37985317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 224 - 273
Target Start/End: Original strand, 4776854 - 4776903
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaa 273  Q
    |||||||| |||||||||||||||||| |||||||| | |||||||||||    
T  4776854 tttttgtgccactacctcatttcctttataaaatttaaattgtcacaaaa 4776903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 224 - 313
Target Start/End: Original strand, 18434893 - 18434982
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttta 313  Q
    |||||||| || ||| |||||| ||||| |||||||| |||||||||||| || |||  || || ||| ||||||||||| |||||||||    
T  18434893 tttttgtgccaatacatcattttctttgcaaaattttggttgtcacaaaagttgtcatctaaatagattttcaaataacacaactcttta 18434982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 310
Target Start/End: Original strand, 31827038 - 31827135
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    ||||| || ||||||||||||| || |||||||  ||||||||||||| |||||  ||||| || |||  || || ||||||||||||||| ||||||    
T  31827038 tattgatttggtttttgtgtcaataactcattttttttgtaaaattttggttgtatcaaaagttgtcatctaaatagatgttcaaataacacaactct 31827135  T

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Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 19947728 - 19947632
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| |||||||||  || |||||| ||| |||| ||||||||| |||||| ||||| || ||| ||| ||  |||||||||||||| |||||    
T  19947728 tattgctttggtttttgtcccaatacctccttttctttataaaattttggttgtctcaaaagttgtcatataaataaatgttcaaataacacaactc 19947632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 6693244 - 6693291
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaatttt 260  Q
    ||||| || ||||||| ||||| |||||||||||||||||||||||||    
T  6693244 tattgttttggtttttatgtcaatacctcatttcctttgtaaaatttt 6693291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 268
Target Start/End: Original strand, 29359724 - 29359779
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtca 268  Q
    |||||||| |||||||||| || ||| |||||| |||||||||||||| |||||||    
T  29359724 tattgctttggtttttgtgccattacatcattttctttgtaaaattttggttgtca 29359779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 315
Target Start/End: Complemental strand, 44517934 - 44517843
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctttaaa 315  Q
    ||||||||||| ||| |  ||| ||||||||| || ||||| || ||||| ||||||||   |||| ||||||||||||| |||||||||||    
T  44517934 tttttgtgtcaatacatatttttctttgtaaatttatagttatcccaaaagttatcacacgaatggttgttcaaataacacaactctttaaa 44517843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 308
Target Start/End: Complemental strand, 49065348 - 49065253
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaact 308  Q
    |||||||| |||||||||| || ||| |||||| |||||||||||||| ||| ||   |||||| ||| ||| || ||| ||||||||||| ||||    
T  49065348 tattgctttggtttttgtgccaatacttcattttctttgtaaaattttggttatctttaaaattgtcatataaatagatattcaaataacacaact 49065253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 312
Target Start/End: Original strand, 50149033 - 50149132
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| ||||||||||||| |   |||||| ||||||||||||||  ||||  ||||| || ||| ||| |  ||||||||||||||| ||||||||    
T  50149033 tattgctttggtttttgtgtcaatcaatcattttctttgtaaaattttgattgttgcaaaagttgtcatataaaatgatgttcaaataacacaactcttt 50149132  T

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Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 312
Target Start/End: Complemental strand, 41677255 - 41677221
Alignment:
Q  278 tcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||||||||||||||||||||| ||||||||    
T  41677255 tcacatatatggatgttcaaataacacaactcttt 41677221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 308
Target Start/End: Original strand, 30570645 - 30570706
Alignment:
Q  247 ctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaact 308  Q
    ||||||||||||||  ||||  |||||||||||| ||| ||| |||||||||||||| ||||    
T  30570645 ctttgtaaaattttgattgtttcaaaaattatcatataaatgaatgttcaaataacacaact 30570706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 41677308 - 41677251
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 270  Q
    ||||| || ||||||||||  ||||||||||||  ||| |||||||||||||||||||    
T  41677308 tattgttttggtttttgtgcaactacctcattttatttataaaattttagttgtcaca 41677251  T

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Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 312
Target Start/End: Original strand, 50333337 - 50333394
Alignment:
Q  255 aattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||| |||||||||||| || ||||||||||||||| | |||||||| || |||||    
T  50333337 aattttggttgtcacaaaagttgtcacatatatggatggttaaataacacaattcttt 50333394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 310
Target Start/End: Complemental strand, 50775140 - 50775043
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||| |||||||||||||  || || ||| |||||||||||| | |||||||||||| || |||   | ||||  |||||||||||| ||||||    
T  50775140 tattgctttggtttttgtgtcaacacatctttttctttgtaaaattatggttgtcacaaaatttgtcaatcaaatggtcgttcaaataacacaactct 50775043  T

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Target: chr2 (Bit Score: 79; Significance: 9e-37; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 43487466 - 43487564
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||| |||||||    
T  43487466 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgttacaaaaattgtcacatatatggatgttcaaataacacaactctt 43487564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 213 - 308
Target Start/End: Original strand, 9207677 - 9207772
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaact 308  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||    
T  9207677 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaaattatcacatatatagatgttcaaataacacaact 9207772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 213 - 316
Target Start/End: Original strand, 9647219 - 9647322
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||| |||||||| |||||||||||||| ||||||||    
T  9647219 tattgctttggtttttgtgtcactacttcatttcctttgtaaaattttggttgtcacaaaagttatcgcatatatgaatgttcaaataacacaactcttt 9647318  T
Q  313 aaaa 316  Q
    ||||    
T  9647319 aaaa 9647322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 213 - 313
Target Start/End: Complemental strand, 18254193 - 18254093
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| |||||||||| ||||| |||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||| ||||||||    
T  18254193 tattgctttggtttttgtgccactatctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 18254094  T
Q  313 a 313  Q
    |    
T  18254093 a 18254093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 213 - 312
Target Start/End: Original strand, 9990778 - 9990877
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| |||||||||  |||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  9990778 tattgctttggtttttgtaccactacttcatttcctttgtaaaattttaattgtcacaaaagttatcacatatatggatgttcaaataacacaactcttt 9990877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 1248773 - 1248871
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||| || |||||||| || |||||||||||||||||||||||||| |||||||    
T  1248773 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttaattatcacaaaagttgtcacatatatggatgttcaaataacacaactctt 1248871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 212 - 311
Target Start/End: Complemental strand, 22888802 - 22888703
Alignment:
Q  212 ttattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    ||||||||| |||||||||| || |||||||||||||||||||||||||  ||||||||||| || |||||||||||||||||||||||||| |||||||    
T  22888802 ttattgctttggtttttgtgccaatacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 22888703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 213 - 312
Target Start/End: Original strand, 41042341 - 41042440
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| ||||||| ||||| || |||||||||||| ||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  41042341 tattgctttggtttttatgtcaatatctcatttcctttataaaattttggttgtcataaaaattgtcacatatatggatgttcaaataacagaactcttt 41042440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 212 - 319
Target Start/End: Complemental strand, 42421883 - 42421776
Alignment:
Q  212 ttattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    ||||||||| ||| |||||| |||||||||||||||||| ||||||||| |||||||||||| || ||||||||||| |||||||||||||| |||||||    
T  42421883 ttattgctttggtgtttgtgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactctt 42421784  T
Q  312 taaaaata 319  Q
    || |||||    
T  42421783 tacaaata 42421776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 213 - 315
Target Start/End: Original strand, 41195671 - 41195773
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| ||||||||||||| || |||||||||||||||||||||| |||||||||||| || | ||||||||| |||||||||||||| |||||| |    
T  41195671 tattgctttggtttttgtgtcaatatctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatgaatgttcaaataacacaactctat 41195770  T
Q  313 aaa 315  Q
    |||    
T  41195771 aaa 41195773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 213 - 303
Target Start/End: Complemental strand, 42091488 - 42091396
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcac--atatatggatgttcaaataaca 303  Q
    |||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||  |||||| |||||||||||||||    
T  42091488 tattgctttggtttttgtgtcactacctcgtttcctttgtaaaattttggttgtcacaaaaattgtcacatatatatagatgttcaaataaca 42091396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 215 - 303
Target Start/End: Complemental strand, 6049327 - 6049239
Alignment:
Q  215 ttgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataaca 303  Q
    |||||| |||||||||| || |||||||||||||||||||||||||  ||||||||||| || ||||||||||||||||||||||||||    
T  6049327 ttgctttggtttttgtgccaatacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataaca 6049239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 213 - 312
Target Start/End: Original strand, 9194328 - 9194427
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    ||||| || |||||||||| || ||||||||||| ||||||||||||| ||||||||||||||| | ||||||||| |||||||||||||| ||||||||    
T  9194328 tattgttttggtttttgtgccattacctcatttcttttgtaaaattttggttgtcacaaaaattgttacatatatgaatgttcaaataacacaactcttt 9194427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 2076656 - 2076754
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||| | ||||||||||| |||||||||| |||||||||||||| |||||||||||| || |||||| ||| ||||||||||||||| |||||||    
T  2076656 tattgctttgatttttgtgtcaatacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatctattgatgttcaaataacacaactctt 2076754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 213 - 310
Target Start/End: Complemental strand, 37737955 - 37737858
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||| | ||||||||||| || ||||||||||||||||| |||| |||||||||||| || ||||||||||||| |||||||||||| ||||||    
T  37737955 tattgctttgatttttgtgtcaatatctcatttcctttgtaaagttttggttgtcacaaaagttgtcacatatatggacgttcaaataacacaactct 37737858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 9760117 - 9760204
Alignment:
Q  225 ttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    ||||||| ||||||||||||||||| | |||||||| |||||||||||| || |||||||||| ||||||||||||||| ||||||||    
T  9760117 ttttgtgccactacctcatttccttggaaaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacacaactcttt 9760204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 213 - 312
Target Start/End: Original strand, 32477419 - 32477518
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| | ||||||| | | ||||||||||||||||| ||||||| |||||||||||| || ||||||||||| |||||||||||||| ||||||||    
T  32477419 tattgctttgatttttgtatgaatacctcatttcctttgtcaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactcttt 32477518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 224 - 309
Target Start/End: Complemental strand, 3838853 - 3838768
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    ||||||||||||| | |||||||||||||||||||||| || |||||||| || |||||||||| ||||||||||||||| |||||    
T  3838853 tttttgtgtcactgcttcatttcctttgtaaaattttaattatcacaaaagttgtcacatatatagatgttcaaataacacaactc 3838768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 7698258 - 7698354
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| | |||||||| |||||||| |||||||||||||||||||| || |||||||| ||||||||| ||| ||||||| ||||||| |||||    
T  7698258 tattgctttgatttttgtgccactacctaatttcctttgtaaaattttaattatcacaaaagttatcacatgtatagatgttctaataacacaactc 7698354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 215 - 301
Target Start/End: Original strand, 19633371 - 19633458
Alignment:
Q  215 ttgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatc-acatatatggatgttcaaataa 301  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||  ||||||||||||    
T  19633371 ttgctttggtttttgtatcactacctcatttcctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaataa 19633458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 215 - 301
Target Start/End: Original strand, 19830272 - 19830359
Alignment:
Q  215 ttgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatc-acatatatggatgttcaaataa 301  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||  ||||||||||||    
T  19830272 ttgctttggtttttgtatcactacctcatttcctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaataa 19830359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 213 - 314
Target Start/End: Complemental strand, 21611644 - 21611538
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctca-----tttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaac 307  Q
    |||||||| | |||||||| ||||||||||     |||| ||||||||||||| ||||||| |||| || |||||||||||||||||||||||||| |||    
T  21611644 tattgctttgatttttgtgccactacctcaccttatttcatttgtaaaattttggttgtcataaaagttgtcacatatatggatgttcaaataacacaac 21611545  T
Q  308 tctttaa 314  Q
    |||||||    
T  21611544 tctttaa 21611538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 213 - 308
Target Start/End: Complemental strand, 34945074 - 34944979
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaact 308  Q
    |||||||| | |||||||| |||||||||||||| ||||||||||||| |||||||| ||| || ||||||||||| || ||||| ||||| ||||    
T  34945074 tattgctttgatttttgtgccactacctcatttcttttgtaaaattttggttgtcacgaaagttgtcacatatatgaatattcaattaacacaact 34944979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 41056721 - 41056636
Alignment:
Q  223 gtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaact 308  Q
    |||||||||||| |||||||||| |||| ||||||||| |||||| ||||| || ||| ||| |||||||||||||||||| ||||    
T  41056721 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 41056636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 25270556 - 25270468
Alignment:
Q  223 gtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||||||| |||||||||| |||| ||||||||| |||||| | ||| || ||| ||| |||||||||||||||||| |||||||    
T  25270556 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcgaaagttgtcatataaatggatgttcaaataacacaactctt 25270468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 6511338 - 6511395
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 270  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||  ||||||||    
T  6511338 tattgctttggtttttgtgtcactacctcatttcctttataaaattttgattgtcaca 6511395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 3097835 - 3097747
Alignment:
Q  223 gtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||||| | || ||||||| |||| ||||||||| |||||| ||||| || ||| ||| |||||||||||||||||| |||||||    
T  3097835 gtttttgtgtaaataactcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 3097747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 13333144 - 13333056
Alignment:
Q  223 gtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||||||| ||| |||||| |||| ||||||||| |||||| ||||| || ||| ||| || ||||||||||||||| |||||||    
T  13333144 gtttttgtgtcaatacatcattttctttataaaattttggttgtctcaaaagttgtcatataaatcgatgttcaaataacacaactctt 13333056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 297
Target Start/End: Complemental strand, 19109077 - 19108993
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaa 297  Q
    |||||||| | |||||||| |||||| |||||||||||| ||||  || |||||||||||| || ||||||||||| ||||||||    
T  19109077 tattgctttgatttttgtgccactacttcatttcctttgcaaaaaatttgttgtcacaaaagttgtcacatatatgaatgttcaa 19108993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 8848681 - 8848583
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||| | |||||||  || ||| |||||| ||||| ||||||||  ||||||||||||||||||  || || ||||||||||||||| |||||||    
T  8848681 tattgctttgatttttgtaccaatacatcattttctttgcaaaattttgattgtcacaaaaattatcatctaaatagatgttcaaataacacaactctt 8848583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 22416300 - 22416357
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 270  Q
    |||||||| |||||||||| |||| |||||||| |||||||||||||| |||||||||    
T  22416300 tattgctttggtttttgtgccactgcctcattttctttgtaaaattttggttgtcaca 22416357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 310
Target Start/End: Complemental strand, 27490714 - 27490617
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||| | ||||||||| | ||| |||||| ||||||||||||||  ||||||||||| || |||   | |||||||||||||||||| ||||||    
T  27490714 tattgctttgatttttgtgttaatacatcattttctttgtaaaattttgattgtcacaaaagttgtcatcaaaatggatgttcaaataacacaactct 27490617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 17388578 - 17388530
Alignment:
Q  222 ggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 270  Q
    |||||||||| ||||||||||||||||||||||||||||  ||||||||    
T  17388578 ggtttttgtgccactacctcatttcctttgtaaaattttgattgtcaca 17388530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 310
Target Start/End: Complemental strand, 7664050 - 7663954
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||| ||||||||||||| |||||| ||| ||||||||| || | |||||||  |||||| |||| || |||  ||||||||||||| ||||||    
T  7664050 tattgctttggtttttgtgtcaatacctctttttctttgtaaatttatggttgtca-taaaattgtcacctaaatgattgttcaaataacacaactct 7663954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 44287426 - 44287369
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 270  Q
    ||||| || |||| ||||| ||| |||||||||||||||||||||||| |||||||||    
T  44287426 tattgttttggttattgtgccacaacctcatttcctttgtaaaattttggttgtcaca 44287369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 1352476 - 1352574
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||| |||||||||| || |  ||||||| ||||||||||||||||||||  ||||  || | | ||| |  ||||||||||||||| |||||||    
T  1352476 tattgctttggtttttgtgccaatcactcattttctttgtaaaattttagttgttgcaaaggttgttatataaaatgatgttcaaataacacaactctt 1352574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 303
Target Start/End: Original strand, 19642685 - 19642775
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataaca 303  Q
    |||||||| | ||||||||||| | | |||||| ||||| |||||| | |||||| ||||| || ||| ||| ||||||||| ||||||||    
T  19642685 tattgctttgatttttgtgtcaatgcttcattttctttgcaaaattgtggttgtctcaaaagttctcatataaatggatgtttaaataaca 19642775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 258
Target Start/End: Original strand, 10216937 - 10216982
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaatt 258  Q
    |||||||||||||||||||||| |||||  ||| ||||||||||||    
T  10216937 tattgcttcggtttttgtgtcaatacctttttttctttgtaaaatt 10216982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 311
Target Start/End: Original strand, 22416353 - 22416386
Alignment:
Q  278 tcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||||||||||||||||||||| |||||||    
T  22416353 tcacatatatggatgttcaaataacacaactctt 22416386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 248 - 310
Target Start/End: Original strand, 136049 - 136108
Alignment:
Q  248 tttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||||||||||||||| |||||    ||| ||| |||||||||||||||||| ||||||    
T  136049 tttgtaaaattttagttgtctcaaaa---gtcatataaatggatgttcaaataacacaactct 136108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 4e-36; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 213 - 310
Target Start/End: Complemental strand, 26724956 - 26724859
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||    
T  26724956 tattgttttggtttttgtgtcactacctcatttcctttgtaaaattttagttgttacaaaagttatcacatatatggatgttcaaataacacaactct 26724859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 213 - 312
Target Start/End: Original strand, 51986129 - 51986228
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||| ||| |||||||||| |||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||| ||||||||    
T  51986129 tatttctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 51986228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 23369316 - 23369218
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||| |||||||||| |||||||||||||||||||||| ||||| |||||||||||| || |||||||||||||||||||||||||| |||||||    
T  23369316 tattgctttggtttttgtgccactacctcatttcctttgtaagattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactctt 23369218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 44539821 - 44539919
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||| || ||||||||||| |||||||||||||| |||||||    
T  44539821 tattgctttggtttttgtgacactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactctt 44539919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 213 - 313
Target Start/End: Original strand, 26732312 - 26732412
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    ||||| || |||||||||| ||||||||||||| |||||||||||||| |||||||||||| || |||||||||||||||||||||||||| ||||||||    
T  26732312 tattgttttggtttttgtgccactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactcttt 26732411  T
Q  313 a 313  Q
    |    
T  26732412 a 26732412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 53801743 - 53801647
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    ||||||||  |||||||||||| ||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||| |||||    
T  53801743 tattgctttagtttttgtgtcaatacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 53801647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 26492094 - 26492192
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||| |||||||||| |||||| |||||||||||||||||||||  |||||||||||||| |||||||||| ||||||||||||||| |||||||    
T  26492094 tattgctttggtttttgtgccactacttcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatagatgttcaaataacacaactctt 26492192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 37297136 - 37297233
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||| || ||| |||||||||||||||||||||| |||||||    
T  37297136 tattgctttggtttttgtgtcactacctcatttcctt-gtaaaattttggttgtcacaaaagttgtcaaatatatggatgttcaaataacacaactctt 37297233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 213 - 310
Target Start/End: Original strand, 36177993 - 36178090
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||| |||||||||  |||||||||||||||||| |||||||||||||||||||||| |||||||||||||  |||||||||||||| ||||||    
T  36177993 tattgctttggtttttgtaccactacctcatttcctttataaaattttagttgtcacaaaagttatcacatatataaatgttcaaataacacaactct 36178090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 214 - 314
Target Start/End: Complemental strand, 31641548 - 31641448
Alignment:
Q  214 attgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttta 313  Q
    ||||||| | ||||||||||||||||| ||||||||| ||||||||| |||||||||||| ||||||| |||||| |||||||||||||| |||||||||    
T  31641548 attgctttgatttttgtgtcactaccttatttcctttataaaattttggttgtcacaaaagttatcacgtatatgaatgttcaaataacacaactcttta 31641449  T
Q  314 a 314  Q
    |    
T  31641448 a 31641448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 217 - 309
Target Start/End: Original strand, 43175075 - 43175167
Alignment:
Q  217 gcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||| |||||||||||||||||||||||||||||||||||||||  || |||||||| || |||||||||||||||||||||||||| |||||    
T  43175075 gctttggtttttgtgtcactacctcatttcctttgtaaaattttgattatcacaaaagttgtcacatatatggatgttcaaataacacaactc 43175167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 215 - 314
Target Start/End: Original strand, 29175314 - 29175413
Alignment:
Q  215 ttgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctttaa 314  Q
    |||||| ||||||||||||| || ||||||| |||||||||||||| |||||||||||| || ||||||||||| |||||||||||||| ||||||||||    
T  29175314 ttgctttggtttttgtgtcaatagctcatttactttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactctttaa 29175413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 39440571 - 39440667
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| | ||||||||||||||||||||||||||| |||||||||  ||||||||||| || ||||||||||| |||||||||||||| |||||    
T  39440571 tattgctttgatttttgtgtcactacctcatttcctttctaaaattttgattgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 39440667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 213 - 312
Target Start/End: Original strand, 11068775 - 11068874
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| | ||||||||||||| ||||||||||||||||||||||| |||| ||||||| || ||||||||||| |||||||||||||| || |||||    
T  11068775 tattgctttgatttttgtgtcactgcctcatttcctttgtaaaattttggttgccacaaaagttgtcacatatatgaatgttcaaataacacaattcttt 11068874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 213 - 300
Target Start/End: Original strand, 37997341 - 37997428
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaata 300  Q
    |||||||| | ||||||||||| |||||||||| |||||||||||||| ||||| |||||||||||||||||||| ||||||||||||    
T  37997341 tattgctttgatttttgtgtcaatacctcattttctttgtaaaattttggttgtaacaaaaattatcacatatatagatgttcaaata 37997428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 213 - 303
Target Start/End: Complemental strand, 10250499 - 10250409
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataaca 303  Q
    |||||||| |||||||||| |||||| |||||| |||||||||||||| |||||||||||| || || |||||||||||||||||||||||    
T  10250499 tattgctttggtttttgtgccactacttcattttctttgtaaaattttggttgtcacaaaagttgtcgcatatatggatgttcaaataaca 10250409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 213 - 303
Target Start/End: Complemental strand, 24575835 - 24575745
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataaca 303  Q
    |||||||| |||||||||| || ||||||||||||||| ||||||||| |||||||||||| || |||||||||| |||||||||||||||    
T  24575835 tattgctttggtttttgtgccaatacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataaca 24575745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 213 - 310
Target Start/End: Original strand, 27965074 - 27965169
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||| |||||||||||||||||||||||||| ||  |||||||| ||||||||| || || |||||||||||||||||||||||||| ||||||    
T  27965074 tattgctttggtttttgtgtcactacctcatttccatt--aaaattttggttgtcacagaagttgtcacatatatggatgttcaaataacacaactct 27965169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 215 - 309
Target Start/End: Original strand, 46213059 - 46213153
Alignment:
Q  215 ttgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||| ||||||||||  ||||||||||||||||||||||||||| ||||| |||||| || |||||||||||||| ||||||||||| |||||    
T  46213059 ttgctttggtttttgtgcaactacctcatttcctttgtaaaattttggttgttacaaaagttttcacatatatggattttcaaataacacaactc 46213153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 213 - 310
Target Start/End: Original strand, 5622545 - 5622642
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||| ||||||||||  ||||||||||||||||||||||||||||||| |||||||| || | |||||||| ||| ||||||||||| ||||||    
T  5622545 tattgctttggtttttgtgcaactacctcatttcctttgtaaaattttagttatcacaaaagttgtgacatatatagatcttcaaataacacaactct 5622642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 224 - 309
Target Start/End: Complemental strand, 38376463 - 38376378
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| ||||| ||||||| ||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||| |||||    
T  38376463 tttttgtgccactatctcattttctttgtaaaattttgattgtcacaaaaattatcacatatatagatgttcaaataacacaactc 38376378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 213 - 301
Target Start/End: Original strand, 15175633 - 15175721
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataa 301  Q
    ||||||||  |||||||||  | ||||||||||||||||||||||||| ||||| |||||| || ||||||||||||||||||||||||    
T  15175633 tattgcttttgtttttgtgctaatacctcatttcctttgtaaaattttggttgtaacaaaagttgtcacatatatggatgttcaaataa 15175721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 213 - 301
Target Start/End: Original strand, 38134440 - 38134528
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataa 301  Q
    ||||| || ||||||||||||||| ||||||||||||||||||||||| ||| |||||||| || |||||| |||| ||||||||||||    
T  38134440 tattgttttggtttttgtgtcactgcctcatttcctttgtaaaattttggttatcacaaaagttgtcacatgtatgaatgttcaaataa 38134528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 212 - 303
Target Start/End: Complemental strand, 27051071 - 27050980
Alignment:
Q  212 ttattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataaca 303  Q
    |||||| || ||||||||||||| || ||||||| |||||||||||||| |||||||||||| || |||||| |||| ||||||||||||||    
T  27051071 ttattgttttggtttttgtgtcaatatctcattttctttgtaaaattttggttgtcacaaaagttgtcacatttatgaatgttcaaataaca 27050980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 42853664 - 42853762
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||| ||||||||||||| |||||||||| |||| |||||||||  ||||| |||||||| ||||  | |||||||||||||||||| |||||||    
T  42853664 tattgctttggtttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaaattgtcactcaaatggatgttcaaataacacaactctt 42853762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 224 - 321
Target Start/End: Complemental strand, 26908055 - 26907958
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctttaaaaatatt 321  Q
    ||||||||| ||||| |||||   ||| |||||||||| |||||| |||||||||||||||||||||| ||||||||||| |||||  ||||||||||    
T  26908055 tttttgtgttactacttcattatttttataaaattttaattgtcataaaaattatcacatatatggatattcaaataacacaactcaataaaaatatt 26907958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 38382418 - 38382506
Alignment:
Q  223 gtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||||||| |||||||||| |||| ||||||||| |||||| ||||| || ||| ||| |||||||||||||||||| |||||||    
T  38382418 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 38382506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 47181938 - 47182026
Alignment:
Q  223 gtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||||||| |||||||||| |||| ||||||||| |||||| ||||| || ||| ||| |||||||||||||||||| |||||||    
T  47181938 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 47182026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 48402171 - 48402083
Alignment:
Q  223 gtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||||||| |||||||||| |||| ||||||||| |||||| ||||| || ||| ||| |||||||||||||||||| |||||||    
T  48402171 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 48402083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 224 - 311
Target Start/End: Original strand, 39478535 - 39478622
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    ||||||||||| |||||||||| |||||||||||||| |||||||||||| || ||| ||||||||||||| ||  |||| |||||||    
T  39478535 tttttgtgtcaatacctcattttctttgtaaaattttggttgtcacaaaagttgtcatatatatggatgtttaataaacacaactctt 39478622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 213 - 311
Target Start/End: Complemental strand, 2575774 - 2575676
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||| ||||| ||||||| |  ||||||| |||||||||| |||||||||||||||| || ||| ||| || ||||||||||||||| |||||||    
T  2575774 tattgctttggtttgtgtgtcaatctctcattttctttgtaaaactttagttgtcacaaaagttgtcatataaatagatgttcaaataacacaactctt 2575676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 46634198 - 46634244
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 270  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  46634198 tttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 46634244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 29531590 - 29531533
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 270  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29531590 tattgttttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcaca 29531533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 225 - 311
Target Start/End: Complemental strand, 56364017 - 56363931
Alignment:
Q  225 ttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||||| |||||||||| |||| ||||||||| |||||| ||||| || |||  || |||||||||||||||||| |||||||    
T  56364017 ttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatgtaaatggatgttcaaataacacaactctt 56363931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 34616658 - 34616746
Alignment:
Q  223 gtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||||||| || ||||||| |||| ||||||||| |||||| ||||| || ||| ||| || ||||||||||||||| |||||||    
T  34616658 gtttttgtgtcaatatctcattttctttataaaattttggttgtctcaaaagttgtcatataaatagatgttcaaataacacaactctt 34616746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 39654911 - 39655009
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||| | ||||||||||| |||||||||| ||||||||| || | ||||||  |||||||||||  || || | ||||||||||||| |||||||    
T  39654911 tattgctttgatttttgtgtcaatacctcattttctttgtaaatttatggttgtcttaaaaattatcatctaaatagttgttcaaataacacaactctt 39655009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 50608597 - 50608551
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 270  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||    
T  50608597 tttttgtgtcaatatctcatttcctttgtaaaattttagttgtcaca 50608551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 2268491 - 2268434
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 270  Q
    ||||| || ||||||||||||| || |||||||||||||||||||||| |||||||||    
T  2268491 tattgttttggtttttgtgtcaatatctcatttcctttgtaaaattttggttgtcaca 2268434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 276
Target Start/End: Complemental strand, 56474751 - 56474688
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaatt 276  Q
    ||||| || ||||||||||||| |||||||||| ||||||||| |||| |||||| ||||||||    
T  56474751 tattgttttggtttttgtgtcaatacctcattttctttgtaaagttttggttgtctcaaaaatt 56474688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 222 - 312
Target Start/End: Complemental strand, 19473931 - 19473841
Alignment:
Q  222 ggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    ||||||||||||| ||| |||||| ||||||||||||||  ||||| ||||| || ||| ||| ||| || ||||||||||| || |||||    
T  19473931 ggtttttgtgtcaatacttcattttctttgtaaaattttgattgtctcaaaagttgtcatataaatgcatcttcaaataacacaaatcttt 19473841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 40348881 - 40348974
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||| |||||||||||||||| ||||||| ||||  ||||||||  ||||||||||| || ||||     || |||||||||||||| |||||||    
T  40348881 tattgctttggtttttgtgtcactatctcattttctttaaaaaattttgattgtcacaaaagttgtcac-----tgaatgttcaaataacacaactctt 40348974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 306
Target Start/End: Original strand, 45083086 - 45083152
Alignment:
Q  240 tcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaa 306  Q
    |||||| |||| |||||||||  |||| | |||| || |||||||||||||||||||||||||||||    
T  45083086 tcattttctttataaaattttgattgtaataaaagttgtcacatatatggatgttcaaataacagaa 45083152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 310
Target Start/End: Complemental strand, 50721725 - 50721631
Alignment:
Q  216 tgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    ||||| ||||||||||||| |  ||||||| ||||||||||||||||||||  ||||  || ||| ||| |  ||||||||||||||| ||||||    
T  50721725 tgctttggtttttgtgtcaatcactcattttctttgtaaaattttagttgttgcaaaggttgtcatataaaatgatgttcaaataacacaactct 50721631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 310
Target Start/End: Original strand, 35897788 - 35897884
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||| | ||||||||||| ||| |||||| | |||||||| | |||||||| ||||| |||||| ||| |||| |||||||||| || ||||||    
T  35897788 tattgctttgatttttgtgtcaatacttcattttcattgtaaaa-tatagttgtcccaaaagttatcatataaatggttgttcaaatagcataactct 35897884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 31995889 - 31995807
Alignment:
Q  223 gtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatat--atggatgttcaaataaca 303  Q
    |||||||||||| |||||||||| |||| |||||||||| ||||| ||||| || | | ||||  |||| |||||||||||||    
T  31995889 gtttttgtgtcaatacctcattttctttctaaaattttaattgtctcaaaagttgttatatataaatggttgttcaaataaca 31995807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 270
Target Start/End: Original strand, 42360265 - 42360300
Alignment:
Q  235 ctacctcatttcctttgtaaaattttagttgtcaca 270  Q
    |||||||||||||||||||||||||| |||||||||    
T  42360265 ctacctcatttcctttgtaaaattttggttgtcaca 42360300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 303
Target Start/End: Complemental strand, 42396021 - 42395931
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataaca 303  Q
    |||||||| | ||||||||  | ||||||||||  ||||||||| |||| || || |||||||||||| |||  | |||||||||||||||    
T  42396021 tattgctttgatttttgtgcaaatacctcattttttttgtaaaactttaattatctcaaaaattatcatataagtagatgttcaaataaca 42395931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 213 - 315
Target Start/End: Original strand, 42491161 - 42491263
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| |||||||||| || |||||| ||| |||||| ||||| | |||||| ||||| || |||   | |||| ||||||||||||| ||||| ||    
T  42491161 tattgctttggtttttgtgccaatacctctttttctttgtgaaattatggttgtcccaaaagttgtcaatcaaatggttgttcaaataacacaactcctt 42491260  T
Q  313 aaa 315  Q
    |||    
T  42491261 aaa 42491263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 38510731 - 38510682
Alignment:
Q  237 acctcatttcctttgtaaaattttagttgtcacaaaaattatcacatata 286  Q
    |||| ||||||||| |||||||||  |||||||||||||||||| |||||    
T  38510731 accttatttcctttataaaattttgattgtcacaaaaattatcatatata 38510682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 310
Target Start/End: Original strand, 39259080 - 39259137
Alignment:
Q  253 aaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    ||||||||| |||||||||||||| |||  || |||||| ||||||||||| ||||||    
T  39259080 aaaattttaattgtcacaaaaattgtcatctaaatggatattcaaataacacaactct 39259137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 310
Target Start/End: Complemental strand, 50831739 - 50831642
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||| | |||||||||||  ||||| ||| |||||||||||| | |||||| ||||| || |||   | |||| ||||||||||||| ||||||    
T  50831739 tattgctttgatttttgtgtcaagacctctttttctttgtaaaattatggttgtcccaaaagttgtcaatcaaatggttgttcaaataacacaactct 50831642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 213 - 317
Target Start/End: Complemental strand, 76603 - 76499
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||| |||||||| ||||||||    
T  76603 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttaaaataacacaactcttt 76504  T
Q  313 aaaaa 317  Q
     ||||    
T  76503 gaaaa 76499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 3e-33; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 552880 - 552976
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||| |||||    
T  552880 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 552976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 213 - 310
Target Start/End: Complemental strand, 32316912 - 32316815
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||| ||||||||||||| |||||||||| |||||||||||||| |||||||||||| || |||||||||||||||||||||||||| ||||||    
T  32316912 tattgctttggtttttgtgtcagtacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactct 32316815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 213 - 313
Target Start/End: Original strand, 15974695 - 15974795
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| ||||||||||| ||||| ||||||||||||||||||||| |||||||||||| || | |||||||||||||||||||||||| ||||||||    
T  15974695 tattgctttggtttttgtgttactacttcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatggatgttcaaataacacaactcttt 15974794  T
Q  313 a 313  Q
    |    
T  15974795 a 15974795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 217 - 312
Target Start/End: Complemental strand, 33430342 - 33430247
Alignment:
Q  217 gcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||| |||| ||||||||| ||||||||    
T  33430342 gctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgtccaaataacacaactcttt 33430247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 13689978 - 13689882
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| | ||||||||||| ||||||||||||||| ||||||||||||||||  ||||||| |||||||||||||||||||||||||| |||||    
T  13689978 tattgctttgatttttgtgtcaatacctcatttcctttataaaattttagttgtcgtaaaaattgtcacatatatggatgttcaaataacacaactc 13689882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 213 - 313
Target Start/End: Original strand, 26595436 - 26595536
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| ||||||||||||| |||||||||| |||||||||||||| |||||  ||||| || ||| ||| |||||||||||||||||| ||||||||    
T  26595436 tattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatggatgttcaaataacacaactcttt 26595535  T
Q  313 a 313  Q
    |    
T  26595536 a 26595536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 31077881 - 31077977
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    ||||| || ||||||||||||||||||||| ||||||||||||||||| |||||||||||| || |||||| |||| || ||||||||||| |||||    
T  31077881 tattgttttggtttttgtgtcactacctcacttcctttgtaaaattttggttgtcacaaaagttgtcacatgtatgaatattcaaataacacaactc 31077977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 212 - 303
Target Start/End: Complemental strand, 18737552 - 18737461
Alignment:
Q  212 ttattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataaca 303  Q
    |||||| || |||||||||| || |||||||||| |||||||||||||| |||||||||||| || ||||||| ||||||||||||||||||    
T  18737552 ttattgttttggtttttgtgacaatacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatacatggatgttcaaataaca 18737461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 213 - 312
Target Start/End: Original strand, 34047474 - 34047573
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| |||||||||| || || ||| ||| |||||||||||||| |||||||||||| || |||||| ||||||||||||||||||| ||||||||    
T  34047474 tattgctttggtttttgtgccaatatctctttttctttgtaaaattttggttgtcacaaaagttgtcacatttatggatgttcaaataacaaaactcttt 34047573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 213 - 310
Target Start/End: Original strand, 1156807 - 1156904
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||| ||| |||||||||| ||||| ||||||||||||  ||||||||  ||||||||||| |||||| |||||||||||||||||||||| ||||||    
T  1156807 tattactttggtttttgtgccactatctcatttcctttacaaaattttgattgtcacaaaagttatcaaatatatggatgttcaaataacacaactct 1156904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 212 - 309
Target Start/End: Original strand, 14818018 - 14818115
Alignment:
Q  212 ttattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||| || |||||||||| |||||||||||||||||| ||||||||| |||||||||||| || ||| ||||||  |||||||||||||| |||||    
T  14818018 ttattgttttggtttttgtgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcatatatataaatgttcaaataacacaactc 14818115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 16199547 - 16199635
Alignment:
Q  223 gtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||||||| |||||||||| |||| ||||||||| |||||| ||||| || ||| ||| |||||||||||||||||| |||||||    
T  16199547 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 16199635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 224 - 309
Target Start/End: Complemental strand, 5694124 - 5694039
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    ||||||||||| ||||||||||||||||||||||||  |||||| ||||| || ||||||| ||| ||||| |||||||| |||||    
T  5694124 tttttgtgtcaatacctcatttcctttgtaaaatttaggttgtctcaaaagttgtcacatacatgaatgtttaaataacacaactc 5694039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 5080551 - 5080494
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 270  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||| ||| |||||    
T  5080551 tattgctttagtttttgtgtcactacctcatttcctttgtaaaattttggttatcaca 5080494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 8098581 - 8098524
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 270  Q
    |||||||| ||||||||||||||||||| ||||||||| ||||||||| |||||||||    
T  8098581 tattgctttggtttttgtgtcactaccttatttcctttctaaaattttggttgtcaca 8098524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 236 - 308
Target Start/End: Original strand, 11612298 - 11612370
Alignment:
Q  236 tacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaact 308  Q
    |||||||||| ||||||||||||||  || ||||||||||||||||||||||  || ||||||||||| ||||    
T  11612298 tacctcattttctttgtaaaattttgattatcacaaaaattatcacatatataaatattcaaataacacaact 11612370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 22079547 - 22079451
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| | ||||||||||| ||| |||||| ||||| |||||||| |||||||||||| |  |||  || |||||||||||||||||| |||||    
T  22079547 tattgctttgatttttgtgtcaatacatcattttctttgcaaaattttggttgtcacaaaagtggtcatctaaatggatgttcaaataacacaactc 22079451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 4820454 - 4820552
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||| | ||||||||||| | |||||||| ||||||||||||||  ||||| ||||| ||||||  || || | ||||||||||||| |||||||    
T  4820454 tattgctttgatttttgtgtcaatgcctcattttctttgtaaaattttgattgtctcaaaagttatcatgtaaatagttgttcaaataacacaactctt 4820552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 277078 - 277174
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| | ||||||||||| ||  |||||| |||||||||||||| ||||||||||||||| |||  || | | ||||| |||||||| |||||    
T  277078 tattgctttgatttttgtgtcaatatatcattttctttgtaaaattttggttgtcacaaaaattgtcatctaaaggaatgtttaaataacacaactc 277174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 280
Target Start/End: Complemental strand, 2242009 - 2241942
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatca 280  Q
    |||||||| ||||||||||||| | |||||||| |||||||  ||||| |||||||||||| ||||||    
T  2242009 tattgctttggtttttgtgtcaatgcctcattttctttgtattattttggttgtcacaaaagttatca 2241942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 298
Target Start/End: Complemental strand, 3853291 - 3853206
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaa 298  Q
    |||||||| | ||||||||||| || ||||||| ||||||||||| || |||||| ||||| || ||| ||| ||| |||||||||    
T  3853291 tattgctttgatttttgtgtcaatatctcattttctttgtaaaatctttgttgtctcaaaagttgtcatataaatgaatgttcaaa 3853206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 310
Target Start/End: Original strand, 30457601 - 30457689
Alignment:
Q  222 ggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    ||||||||||||| |||||||||| || ||| ||||||| ||| || ||||| || ||| ||| ||||||||| || ||||| ||||||    
T  30457601 ggtttttgtgtcaatacctcattttctatgtgaaattttggttatctcaaaagttgtcatataaatggatgttgaattaacacaactct 30457689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 33603265 - 33603217
Alignment:
Q  212 ttattgcttcggtttttgtgtcactacctcatttcctttgtaaaatttt 260  Q
    ||||||||| | ||||||||||| |||||||||| ||||||||||||||    
T  33603265 ttattgctttgatttttgtgtcaatacctcattttctttgtaaaatttt 33603217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 230 - 273
Target Start/End: Complemental strand, 5570305 - 5570262
Alignment:
Q  230 tgtcactacctcatttcctttgtaaaattttagttgtcacaaaa 273  Q
    |||||||| ||||||||||||||||||||||| |||||| ||||    
T  5570305 tgtcactatctcatttcctttgtaaaattttaattgtcataaaa 5570262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 312
Target Start/End: Original strand, 24900861 - 24900960
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| |||||||||| || |  ||||||| ||||||||||||||| ||||  ||||  || ||| ||| |  ||||||||||||||| ||||||||    
T  24900861 tattgctttggtttttgtgccaatcactcattttctttgtaaaattttaattgttgcaaatgttgtcatataaaatgatgttcaaataacacaactcttt 24900960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 309
Target Start/End: Complemental strand, 5080501 - 5080467
Alignment:
Q  275 ttatcacatatatggatgttcaaataacagaactc 309  Q
    ||||||||||||||||||||||||||||| |||||    
T  5080501 ttatcacatatatggatgttcaaataacacaactc 5080467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 312
Target Start/End: Complemental strand, 21968866 - 21968779
Alignment:
Q  223 gtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    ||||||||| || ||||||||||  || ||||| |||| |||||| ||||  |||||| ||| |||||| ||||||||||| ||||||||    
T  21968866 gtttttgtgccaatacctcattttattcgtaaattttttgttgtctcaaa--ttatcaaataaatggatcttcaaataacacaactcttt 21968779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 146
Target Start/End: Complemental strand, 25811918 - 25811888
Alignment:
Q  116 tttaaaaatgagaaatgatatttgaacaacc 146  Q
    |||||||||||||||||||||||||||||||    
T  25811918 tttaaaaatgagaaatgatatttgaacaacc 25811888  T

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Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 297
Target Start/End: Complemental strand, 11014963 - 11014890
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaa 297  Q
    ||||||||||| |||||||||| |||  |||||||||  ||||| ||||| |||||| ||| || |||||||||    
T  11014963 tttttgtgtcaatacctcattttcttcataaaattttgattgtctcaaaagttatcatataaatagatgttcaa 11014890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 144
Target Start/End: Complemental strand, 11635615 - 11635587
Alignment:
Q  116 tttaaaaatgagaaatgatatttgaacaa 144  Q
    |||||||||||||||||||||||||||||    
T  11635615 tttaaaaatgagaaatgatatttgaacaa 11635587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 215 - 312
Target Start/End: Original strand, 8757 - 8854
Alignment:
Q  215 ttgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||| || ||| |||||||||||||||||||||| ||||||||    
T  8757 ttgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcataaaagttgtcagatatatggatgttcaaataacacaactcttt 8854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 2e-31; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 213 - 310
Target Start/End: Complemental strand, 24614300 - 24614203
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||  || |||||||| |||||||||||||| |||||||||||||| ||||||    
T  24614300 tattgctttggtttttgtgtcactacctcatttcctttgtaaaattttgattatcacaaaagttatcacatatatgaatgttcaaataacacaactct 24614203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 38956602 - 38956506
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| | |||||||| |||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||| |||||    
T  38956602 tattgctttgttttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 38956506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 44895556 - 44895460
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||| || | |||||||||||||||||||||||| |||||    
T  44895556 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatggatgttcaaataacataactc 44895460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 213 - 317
Target Start/End: Complemental strand, 25192901 - 25192797
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    ||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||| |||| || ||||||||||| ||||||||    
T  25192901 tattgttttggtttttgtgtcactacctcattttctttgtaaaattttagttgtcacaaaagttgtcacatgtatgaatattcaaataacacaactcttt 25192802  T
Q  313 aaaaa 317  Q
     ||||    
T  25192801 gaaaa 25192797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 32529841 - 32529745
Alignment:
Q  212 ttattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaact 308  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||||  |||||||||||||| ||||||||||||||| |||||||||| ||||    
T  32529841 ttattgctttggtttttttatcactacctcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatggatgctcaaataacacaact 32529745  T

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Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 213 - 310
Target Start/End: Original strand, 43025427 - 43025524
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||| |||||||||| ||||| |||||||||||||||||||||||||||| |||||| || |||||||||| ||||||| ||||||| ||||||    
T  43025427 tattgctttggtttttgtgccactatctcatttcctttgtaaaattttagttgttacaaaagttgtcacatatatagatgttcgaataacacaactct 43025524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 212 - 309
Target Start/End: Complemental strand, 41989727 - 41989628
Alignment:
Q  212 ttattgcttcggtttttgtgtcactacctcatttccttt--gtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    ||||||||| |||||||||| |||||||||||||  |||  |||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||    
T  41989727 ttattgctttggtttttgtgccactacctcattttttttttgtaaaattttggttgtcacaaaagttatcacatatatggatgttcaaataacacaactc 41989628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 213 - 312
Target Start/End: Complemental strand, 3937107 - 3937008
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||| ||| |||||||||| || ||||||||||||||| ||||||||| |||||||||||| || |||||| ||||||||||||||||||| ||||||||    
T  3937107 tattactttggtttttgtgccaatacctcatttcctttataaaattttggttgtcacaaaagttgtcacatgtatggatgttcaaataacacaactcttt 3937008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 237 - 312
Target Start/End: Original strand, 43942743 - 43942818
Alignment:
Q  237 acctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    ||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  43942743 acctcattttctttgtaaaattttggttgccacaaaaattatcacatatatggatgttcaaataacacaactcttt 43942818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 213 - 309
Target Start/End: Complemental strand, 45851188 - 45851095
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| |||||||||||||||   ||||||||||||||||||||||||||||| ||||||| | ||| |||||||||||||||||||| |||||    
T  45851188 tattgctttggtttttgtgtcact---tcatttcctttgtaaaattttagttgtcaaaaaaattgtgacagatatggatgttcaaataacacaactc 45851095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 213 - 310
Target Start/End: Complemental strand, 40112938 - 40112841
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||| |||||||||| |||||||| |||||||||||||||||||  |||||| | || || | |||||||||||||||||||||||| ||||||    
T  40112938 tattgctttggtttttgtgccactaccttatttcctttgtaaaattttgattgtcagagaagttgttacatatatggatgttcaaataacacaactct 40112841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 213 - 301
Target Start/End: Complemental strand, 22918153 - 22918065
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataa 301  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||  ||||| ||||| || |||||| |||||||| ||||||||    
T  22918153 tattgctttggtttttgtgccactacctcatttcctttgtaaaattttgattgtcgcaaaagttgtcacatgtatggatgctcaaataa 22918065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 213 - 310
Target Start/End: Complemental strand, 41189527 - 41189428
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacat--atatggatgttcaaataacagaactct 310  Q
    ||||||||  |||||||||||| |||||||||||||||||||||||||  |||||| |||| |||||||||  ||||| |||||||||||||| ||||||    
T  41189527 tattgctttagtttttgtgtcaatacctcatttcctttgtaaaattttgattgtcataaaagttatcacatatatatgaatgttcaaataacacaactct 41189428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 46022241 - 46022153
Alignment:
Q  223 gtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||||||| |||||||||| |||| ||||||||| |||||| ||||| || ||| ||| |||||||||||||||||| |||||||    
T  46022241 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 46022153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 213 - 311
Target Start/End: Original strand, 48062144 - 48062242
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    ||||| || ||||||||||||| |||||||||| |||| |||||||||  ||||| |||||||||||||  | | |||||||||||||||| |||||||    
T  48062144 tattgttttggtttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaaattatcactcaaacggatgttcaaataacacaactctt 48062242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 224 - 301
Target Start/End: Complemental strand, 46578108 - 46578031
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataa 301  Q
    |||||||| || |||||| |||| ||| ||||||||| ||||||| | ||||||||||||||||||||||||||||||    
T  46578108 tttttgtgccaatacctcgtttcttttataaaattttggttgtcatagaaattatcacatatatggatgttcaaataa 46578031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 7701641 - 7701729
Alignment:
Q  223 gtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctt 311  Q
    |||||||||||| |||||||||| |||| ||||| ||| |||||| ||||| || ||| ||| |||||||||||||||||| |||||||    
T  7701641 gtttttgtgtcaatacctcattttctttataaaactttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactctt 7701729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 38073307 - 38073364
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 270  Q
    |||||||| |||||||||| || ||||||||||||||||||||||||| |||||||||    
T  38073307 tattgctttggtttttgtgccaatacctcatttcctttgtaaaattttggttgtcaca 38073364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 309
Target Start/End: Original strand, 40417861 - 40417957
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    |||||||| ||||||| ||||| ||||||| || |||||||||||||| |||||| ||||| || ||  ||| || ||||||||||||||| |||||    
T  40417861 tattgctttggtttttatgtcaatacctcactttctttgtaaaattttggttgtctcaaaagttgtcgtataaatagatgttcaaataacacaactc 40417957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 293
Target Start/End: Complemental strand, 44189294 - 44189214
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgt 293  Q
    |||| ||| |||||||||||||||| ||||||||||||| ||| ||||  ||||||||||| |||||||||| ||| ||||    
T  44189294 tattactttggtttttgtgtcactaactcatttcctttgaaaatttttgattgtcacaaaagttatcacatacatgaatgt 44189214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 213 - 315
Target Start/End: Original strand, 31445405 - 31445507
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    |||||||| | ||||||||||| |  ||||||| ||||||||||||||  ||||  |||||||||||| ||| |  ||||||||||||||| |||||| |    
T  31445405 tattgctttgatttttgtgtcaatcactcattttctttgtaaaattttgattgttgcaaaaattatcatataaaatgatgttcaaataacacaactctat 31445504  T
Q  313 aaa 315  Q
    |||    
T  31445505 aaa 31445507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 310
Target Start/End: Complemental strand, 35072346 - 35072249
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||| | ||||||||||| |  ||||||| |||| ||||||||| |||||  ||||| || ||| ||| ||||||||||| |||||| ||||||    
T  35072346 tattgctttgatttttgtgtcaatgtctcattttctttataaaattttggttgtttcaaaagttgtcatataaatggatgttcagataacacaactct 35072249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 310
Target Start/End: Complemental strand, 3614396 - 3614333
Alignment:
Q  247 ctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||||||||| |||||  ||||| || ||| ||| |||||||||||||||||| ||||||    
T  3614396 ctttgtaaaattttggttgtttcaaaagttgtcatataaatggatgttcaaataacataactct 3614333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 303
Target Start/End: Original strand, 35207588 - 35207676
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataaca 303  Q
    |||||||| | | ||||||||| ||| ||||||  ||||||||||||| |||||| |  ||||||||  ||| ||||||||||||||||||    
T  35207588 tattgctttgatatttgtgtcaatacttcattttatttgtaaaattttggttgtctc--aaattatcctataaatggatgttcaaataaca 35207676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 303
Target Start/End: Complemental strand, 13401631 - 13401557
Alignment:
Q  229 gtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataaca 303  Q
    ||||||||| ||  ||||||||||||| |  | ||||||||||||||| |||| || |||| |||||||||||||    
T  13401631 gtgtcactatctattttcctttgtaaattagtggttgtcacaaaaattgtcacttaaatggttgttcaaataaca 13401557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 35628005 - 35627907
Alignment:
Q  212 ttattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    ||||||||| ||||||||||||| |||||| ||| |||| ||||||| | ||| || ||||| ||||||   | || | ||||||||||||| ||||||    
T  35628005 ttattgctttggtttttgtgtcaatacctctttttctttataaaattatggttatctcaaaagttatcaatcagatagttgttcaaataacacaactct 35627907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 310
Target Start/End: Complemental strand, 35098687 - 35098590
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||| | ||||||||||| |  ||||||| || | ||||||||| |||||  ||||| || ||| ||| |||||| ||||||||||| ||||||    
T  35098687 tattgctttgatttttgtgtcaatgtctcattttctatataaaattttggttgtttcaaaagttgtcatataaatggatattcaaataacacaactct 35098590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 38861183 - 38861240
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 270  Q
    ||||| || |||||||||| |||||||| |||| ||||||||||||||  ||||||||    
T  38861183 tattgttttggtttttgtgccactaccttatttactttgtaaaattttgattgtcaca 38861240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 303
Target Start/End: Original strand, 42552994 - 42553075
Alignment:
Q  222 ggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataaca 303  Q
    |||||||||| || |||||| ||| |||||||||||| | ||| || ||||| ||||||  || |||| |||||||||||||    
T  42552994 ggtttttgtgccaatacctctttttctttgtaaaattatggttttctcaaaagttatcaattaaatggttgttcaaataaca 42553075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 308
Target Start/End: Complemental strand, 47391298 - 47391214
Alignment:
Q  224 tttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaact 308  Q
    ||||||||||| ||  ||||||||||| |||||| ||  |||||  |||| |||| ||||||||| |||||||| ||||| ||||    
T  47391298 tttttgtgtcaatatttcatttcctttataaaatattgattgtcttaaaagttattacatatatgaatgttcaactaacacaact 47391214  T

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Target: scaffold0098 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 222 - 309
Target Start/End: Original strand, 49391 - 49478
Alignment:
Q  222 ggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactc 309  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||| || |||||||||||||||||||||||||| |||||    
T  49391 ggtttttgtgtcactacctcatttcctttgtaaaattttggttatcacaaaagttgtcacatatatggatgttcaaataacataactc 49478  T

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Target: scaffold0519 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 213 - 310
Target Start/End: Original strand, 11869 - 11966
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||| ||||||||||||| |||||||||| |||||||||||||| || ||||||||| || ||| || ||| ||||||||||||| | ||||||    
T  11869 tattgctttggtttttgtgtcaatacctcattttctttgtaaaattttggtcgtcacaaaagttgtcatatttatagatgttcaaataatacaactct 11966  T

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Target: scaffold0067 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 35610 - 35667
Alignment:
Q  213 tattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 270  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||  ||||||||    
T  35610 tattgctttggtttttgtgtcactacctcattttctttgtaaaattttgattgtcaca 35667  T

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Target: scaffold0087 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 315
Target Start/End: Complemental strand, 53335 - 53243
Alignment:
Q  223 gtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactctttaaa 315  Q
    |||||||||||| || ||||||| |||| |||| |||| ||||||  |||| |||||| ||| ||  |||||||||||||| ||||| |||||    
T  53335 gtttttgtgtcaatatctcattttctttataaatttttggttgtctaaaaacttatcatataaataaatgttcaaataacacaactcattaaa 53243  T

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Target: scaffold0148 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 312
Target Start/End: Complemental strand, 20845 - 20786
Alignment:
Q  253 aaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactcttt 312  Q
    ||||||||  || |||||||||||||||  || |||||||||||||||||| ||||||||    
T  20845 aaaattttgattatcacaaaaattatcatttaaatggatgttcaaataacacaactcttt 20786  T

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Target: scaffold0184 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 310
Target Start/End: Complemental strand, 16773 - 16676
Alignment:
Q  212 ttattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||||  ||||||||  || |||||||||| |||||||||  || | |||||  |||| || ||| ||| |||||||||||||||||||||||||    
T  16773 ttattgctttagtttttgtaccaatacctcattttctttgtaaatgttga-ttgtcttaaaagttgtcatataaatggatgttcaaataacagaactct 16676  T

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Target: scaffold0078 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 56071 - 56168
Alignment:
Q  212 ttattgcttcggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacagaactct 310  Q
    |||||||||  ||||||||  || |||||||||| |||||||||  || | |||||  |||| || ||| ||| |||||||||||||||||||||||||    
T  56071 ttattgctttagtttttgtaccaatacctcattttctttgtaaatgttga-ttgtcttaaaagttgtcatataaatggatgttcaaataacagaactct 56168  T

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