View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8939_low_2 (Length: 933)

Name: NF8939_low_2
Description: NF8939
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8939_low_2
NF8939_low_2
[»] chr5 (30 HSPs)
chr5 (33-926)||(34434202-34435094)
chr5 (78-205)||(5195092-5195220)
chr5 (78-197)||(39799977-39800096)
chr5 (98-200)||(8241051-8241153)
chr5 (78-134)||(6734686-6734742)
chr5 (91-148)||(3741007-3741064)
chr5 (91-148)||(4418302-4418359)
chr5 (78-186)||(20707734-20707842)
chr5 (78-133)||(885105-885160)
chr5 (91-134)||(6167279-6167322)
chr5 (78-197)||(15241400-15241519)
chr5 (78-148)||(6119918-6119988)
chr5 (91-197)||(24477829-24477934)
chr5 (91-148)||(7443392-7443449)
chr5 (76-197)||(11897252-11897373)
chr5 (78-127)||(33372949-33372998)
chr5 (91-148)||(35317375-35317431)
chr5 (78-151)||(37104120-37104193)
chr5 (91-148)||(41930158-41930215)
chr5 (91-127)||(3821381-3821417)
chr5 (93-197)||(18928724-18928828)
chr5 (96-135)||(14970345-14970384)
chr5 (111-197)||(3198331-3198417)
chr5 (91-148)||(17891818-17891876)
chr5 (91-197)||(18597413-18597518)
chr5 (86-147)||(38097326-38097388)
chr5 (100-193)||(7545367-7545460)
chr5 (76-197)||(21918056-21918177)
chr5 (91-148)||(23937893-23937950)
chr5 (91-148)||(33909058-33909115)
[»] chr3 (53 HSPs)
chr3 (425-689)||(30665310-30665574)
chr3 (84-148)||(8488480-8488544)
chr3 (102-148)||(40723631-40723677)
chr3 (78-170)||(25883935-25884027)
chr3 (92-195)||(26942759-26942862)
chr3 (91-134)||(41710650-41710693)
chr3 (91-197)||(14795115-14795221)
chr3 (78-148)||(16231839-16231909)
chr3 (91-197)||(16886586-16886692)
chr3 (76-154)||(40739156-40739234)
chr3 (79-197)||(48739692-48739810)
chr3 (91-200)||(6488125-6488234)
chr3 (91-148)||(15085644-15085701)
chr3 (91-148)||(27329892-27329949)
chr3 (91-148)||(36478148-36478205)
chr3 (91-148)||(51879148-51879205)
chr3 (79-147)||(4807993-4808061)
chr3 (76-197)||(3748547-3748668)
chr3 (78-135)||(9114077-9114134)
chr3 (76-197)||(18764814-18764933)
chr3 (76-197)||(22501876-22501997)
chr3 (76-197)||(34898712-34898833)
chr3 (92-197)||(39966035-39966140)
chr3 (99-199)||(16991838-16991938)
chr3 (91-127)||(39709112-39709148)
chr3 (91-127)||(46767417-46767453)
chr3 (76-147)||(4860215-4860286)
chr3 (76-147)||(4880223-4880294)
chr3 (97-148)||(8497072-8497123)
chr3 (84-127)||(36472384-36472427)
chr3 (76-195)||(41936352-41936471)
chr3 (84-147)||(47098570-47098632)
chr3 (98-197)||(48546177-48546276)
chr3 (78-197)||(50675689-50675808)
chr3 (70-145)||(52410180-52410255)
chr3 (78-172)||(8171663-8171757)
chr3 (92-146)||(10828525-10828579)
chr3 (78-148)||(17729044-17729114)
chr3 (78-148)||(19030273-19030343)
chr3 (84-174)||(23653170-23653259)
chr3 (91-197)||(30779527-30779633)
chr3 (76-174)||(32023442-32023539)
chr3 (91-133)||(41253709-41253751)
chr3 (91-197)||(47098736-47098842)
chr3 (91-148)||(5641574-5641631)
chr3 (76-148)||(8762024-8762097)
chr3 (156-197)||(17278319-17278360)
chr3 (91-148)||(23090306-23090363)
chr3 (98-175)||(26880203-26880279)
chr3 (99-148)||(29373417-29373466)
chr3 (76-197)||(39719939-39720060)
chr3 (91-148)||(44625185-44625242)
chr3 (92-197)||(52984014-52984119)
[»] chr4 (43 HSPs)
chr4 (470-609)||(6852822-6852961)
chr4 (78-197)||(35465439-35465558)
chr4 (91-148)||(30305852-30305909)
chr4 (76-197)||(33933684-33933805)
chr4 (76-134)||(37442018-37442076)
chr4 (91-189)||(41137880-41137978)
chr4 (84-197)||(3784916-3785027)
chr4 (91-148)||(36099143-36099200)
chr4 (98-146)||(2860699-2860747)
chr4 (78-146)||(4513387-4513455)
chr4 (93-197)||(50376612-50376715)
chr4 (78-197)||(10402445-10402564)
chr4 (85-148)||(32898490-32898553)
chr4 (78-197)||(37868514-37868633)
chr4 (78-197)||(40051626-40051745)
chr4 (76-203)||(55021552-55021679)
chr4 (78-200)||(10417168-10417290)
chr4 (76-197)||(8965098-8965219)
chr4 (99-200)||(50512361-50512461)
chr4 (84-148)||(28715743-28715807)
chr4 (77-125)||(35851649-35851697)
chr4 (91-147)||(47929299-47929355)
chr4 (92-148)||(54215814-54215870)
chr4 (98-197)||(624484-624583)
chr4 (91-134)||(3161089-3161132)
chr4 (70-197)||(9761119-9761246)
chr4 (98-197)||(11375856-11375955)
chr4 (78-197)||(48569123-48569242)
chr4 (91-133)||(17435440-17435482)
chr4 (81-203)||(25726259-25726381)
chr4 (91-133)||(39489854-39489896)
chr4 (78-148)||(42381060-42381130)
chr4 (98-144)||(47586275-47586321)
chr4 (92-197)||(7686223-7686328)
chr4 (78-195)||(21935483-21935600)
chr4 (91-124)||(23142713-23142746)
chr4 (91-124)||(23176682-23176715)
chr4 (78-203)||(30217597-30217722)
chr4 (91-200)||(42134417-42134526)
chr4 (76-149)||(43271662-43271735)
chr4 (76-197)||(49901486-49901607)
chr4 (76-197)||(51890801-51890921)
chr4 (96-201)||(52556939-52557043)
[»] chr8 (37 HSPs)
chr8 (78-148)||(34873139-34873209)
chr8 (78-154)||(40904578-40904654)
chr8 (95-197)||(13105095-13105197)
chr8 (76-197)||(13059122-13059243)
chr8 (91-148)||(36035139-36035196)
chr8 (76-196)||(24480766-24480886)
chr8 (76-195)||(5328512-5328631)
chr8 (91-148)||(31024347-31024404)
chr8 (78-134)||(33810707-33810763)
chr8 (91-147)||(44053400-44053456)
chr8 (76-204)||(44615678-44615805)
chr8 (91-198)||(2908052-2908158)
chr8 (91-146)||(10761874-10761929)
chr8 (78-197)||(16449129-16449248)
chr8 (70-148)||(17499029-17499107)
chr8 (78-196)||(34266017-34266135)
chr8 (91-169)||(43875210-43875287)
chr8 (76-197)||(8265272-8265393)
chr8 (102-147)||(11406650-11406695)
chr8 (91-148)||(37708744-37708801)
chr8 (76-197)||(38344053-38344174)
chr8 (76-197)||(39587551-39587672)
chr8 (82-191)||(41272104-41272212)
chr8 (92-148)||(8183373-8183429)
chr8 (84-200)||(12770369-12770484)
chr8 (91-175)||(14181302-14181386)
chr8 (91-197)||(24296831-24296934)
chr8 (78-134)||(26217858-26217914)
chr8 (78-148)||(21133060-21133130)
chr8 (92-154)||(31152980-31153042)
chr8 (91-148)||(5038611-5038668)
chr8 (101-146)||(9813011-9813056)
chr8 (76-133)||(21548442-21548499)
chr8 (111-192)||(26467777-26467858)
chr8 (76-197)||(34472301-34472422)
chr8 (159-200)||(39164979-39165020)
chr8 (76-197)||(43656040-43656161)
[»] chr2 (42 HSPs)
chr2 (91-196)||(15939294-15939399)
chr2 (100-197)||(15764934-15765031)
chr2 (67-170)||(11265054-11265157)
chr2 (92-151)||(13194935-13194994)
chr2 (97-180)||(17605448-17605531)
chr2 (78-148)||(7717552-7717622)
chr2 (91-161)||(11268329-11268399)
chr2 (78-204)||(13528623-13528749)
chr2 (91-149)||(23984183-23984241)
chr2 (78-200)||(28194633-28194755)
chr2 (78-148)||(32854585-32854655)
chr2 (91-197)||(35797986-35798092)
chr2 (78-195)||(1844823-1844940)
chr2 (76-197)||(3438952-3439073)
chr2 (91-196)||(3596255-3596359)
chr2 (91-148)||(5947919-5947976)
chr2 (91-200)||(17524840-17524947)
chr2 (93-134)||(20497157-20497198)
chr2 (78-147)||(44186497-44186566)
chr2 (77-197)||(33228879-33228999)
chr2 (76-148)||(38400367-38400439)
chr2 (84-148)||(39635353-39635417)
chr2 (76-148)||(43895966-43896038)
chr2 (101-180)||(7000953-7001032)
chr2 (78-197)||(22653591-22653710)
chr2 (91-146)||(39733609-39733664)
chr2 (97-127)||(10463160-10463190)
chr2 (78-148)||(18862305-18862375)
chr2 (123-197)||(23405200-23405274)
chr2 (91-197)||(23919438-23919543)
chr2 (78-148)||(28153089-28153159)
chr2 (98-203)||(36112922-36113027)
chr2 (77-127)||(37486879-37486929)
chr2 (91-145)||(44033283-44033337)
chr2 (92-134)||(44898443-44898485)
chr2 (76-197)||(8250246-8250367)
chr2 (91-148)||(14518337-14518394)
chr2 (91-148)||(18254642-18254699)
chr2 (76-197)||(19684077-19684197)
chr2 (98-147)||(25067268-25067317)
chr2 (100-133)||(38533616-38533649)
chr2 (100-133)||(38534139-38534172)
[»] chr7 (28 HSPs)
chr7 (84-200)||(47440763-47440880)
chr7 (98-200)||(20421726-20421828)
chr7 (78-147)||(4232550-4232619)
chr7 (92-197)||(21402789-21402894)
chr7 (78-148)||(32047142-32047212)
chr7 (78-148)||(35835646-35835716)
chr7 (78-203)||(4960782-4960907)
chr7 (78-134)||(28799967-28800024)
chr7 (99-147)||(18503448-18503496)
chr7 (76-148)||(43119377-43119449)
chr7 (91-150)||(5658555-5658614)
chr7 (91-134)||(13702092-13702135)
chr7 (138-201)||(37240079-37240142)
chr7 (91-134)||(46758309-46758352)
chr7 (91-197)||(30388467-30388573)
chr7 (84-133)||(10363373-10363421)
chr7 (76-133)||(11692458-11692515)
chr7 (84-197)||(15021165-15021277)
chr7 (91-196)||(22548216-22548320)
chr7 (91-148)||(27788322-27788378)
chr7 (91-148)||(27791478-27791534)
chr7 (84-133)||(33590516-33590565)
chr7 (76-197)||(35950132-35950253)
chr7 (96-129)||(37710157-37710190)
chr7 (84-197)||(38151348-38151460)
chr7 (98-147)||(43404941-43404990)
chr7 (76-197)||(45284765-45284885)
chr7 (95-148)||(46645762-46645815)
[»] chr6 (25 HSPs)
chr6 (76-148)||(32141981-32142053)
chr6 (91-204)||(3709855-3709969)
chr6 (102-180)||(20846067-20846145)
chr6 (84-148)||(18904318-18904382)
chr6 (76-134)||(32616451-32616509)
chr6 (76-145)||(31803540-31803609)
chr6 (91-148)||(32621542-32621599)
chr6 (78-197)||(7545333-7545452)
chr6 (94-135)||(1368150-1368191)
chr6 (76-197)||(3640518-3640639)
chr6 (76-197)||(16406573-16406693)
chr6 (91-148)||(28021286-28021342)
chr6 (92-148)||(24129363-24129419)
chr6 (76-148)||(33646888-33646960)
chr6 (77-192)||(3795720-3795835)
chr6 (99-142)||(29646719-29646762)
chr6 (76-197)||(2251842-2251964)
chr6 (111-197)||(32283542-32283628)
chr6 (89-126)||(6329819-6329856)
chr6 (76-197)||(7177299-7177420)
chr6 (76-197)||(9435630-9435751)
chr6 (78-203)||(22997334-22997459)
chr6 (78-203)||(23790942-23791067)
chr6 (76-133)||(24784262-24784319)
chr6 (76-197)||(30885515-30885636)
[»] chr1 (38 HSPs)
chr1 (84-148)||(18512528-18512592)
chr1 (78-197)||(50103864-50103984)
chr1 (78-197)||(37662504-37662623)
chr1 (91-148)||(5430999-5431056)
chr1 (78-195)||(28564292-28564409)
chr1 (76-197)||(48638536-48638657)
chr1 (76-148)||(33033179-33033251)
chr1 (96-148)||(41998401-41998453)
chr1 (76-203)||(7191030-7191157)
chr1 (91-154)||(18911898-18911961)
chr1 (91-146)||(27579434-27579489)
chr1 (98-197)||(35605590-35605689)
chr1 (104-147)||(45518379-45518422)
chr1 (96-134)||(12613244-12613282)
chr1 (99-133)||(27094297-27094331)
chr1 (96-134)||(42735948-42735986)
chr1 (78-148)||(45180469-45180538)
chr1 (91-148)||(13763814-13763871)
chr1 (76-197)||(21265660-21265781)
chr1 (78-197)||(8741477-8741596)
chr1 (91-146)||(11344493-11344548)
chr1 (91-146)||(11502513-11502568)
chr1 (78-193)||(50533076-50533190)
chr1 (98-148)||(1604191-1604241)
chr1 (91-197)||(24874975-24875080)
chr1 (82-148)||(34557275-34557340)
chr1 (91-197)||(34656355-34656461)
chr1 (79-141)||(34824228-34824290)
chr1 (78-204)||(43021570-43021695)
chr1 (76-197)||(7166172-7166293)
chr1 (84-197)||(11860046-11860158)
chr1 (78-203)||(19011353-19011478)
chr1 (76-197)||(25999854-25999975)
chr1 (91-148)||(26909831-26909887)
chr1 (76-197)||(32594255-32594376)
chr1 (78-135)||(38204979-38205036)
chr1 (99-136)||(41972692-41972729)
chr1 (76-197)||(44732637-44732758)
[»] scaffold0088 (1 HSPs)
scaffold0088 (76-197)||(10771-10892)
[»] scaffold0250 (1 HSPs)
scaffold0250 (111-197)||(15009-15095)
[»] scaffold0445 (1 HSPs)
scaffold0445 (76-197)||(3959-4080)
[»] scaffold0141 (1 HSPs)
scaffold0141 (101-134)||(39869-39902)
[»] scaffold0128 (1 HSPs)
scaffold0128 (76-197)||(17624-17745)
[»] scaffold0049 (1 HSPs)
scaffold0049 (101-134)||(74910-74943)


Alignment Details
Target: chr5 (Bit Score: 797; Significance: 0; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 797; E-Value: 0
Query Start/End: Original strand, 33 - 926
Target Start/End: Original strand, 34434202 - 34435094
Alignment:
Q  33 tttttctaagtatttcaagaggttgtgnnnnnnnatcttcttgtggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtg 132  Q
    |||| ||||||||||||||||| ||||       |||||||||||||||| |||| | |||| ||||||||||||||||||||||||||||| |||||||    
T  34434202 ttttcctaagtatttcaagaggctgtgtttttttatcttcttgtggtcaagtagtttagtggttggagctcacacattttaaatgtagagaaatgaggtg 34434301  T
Q  133 tctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagctaagctcatggagacgcaagtctcagttatgtttaatcaatac 232  Q
    |||| | ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||| || | ||||||||||||||||||    
T  34434302 tctaggattcgaaccctaacccatatatattttatgcaatgtctctactaaatgagctaagctcatggggacgcaaatcgc-gttatgtttaatcaatac 34434400  T
Q  233 ctattcacacttcaaatgttttcaggtccattatttcttctataaacaaaagttgtatttattatggtaacaaacacaacatagattatatgttttgact 332  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34434401 ctattcacacttcaaatgttttcacgtccattatttcttctataaacaaaagttgtattcattatggtaacaaacacaacatagattatatgttttgact 34434500  T
Q  333 atatctctaaatcattttgttttataataaatgtaataaactggcttaaagctaagagataaaagatcaaaccatagaaagatccactcttgatagcatc 432  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34434501 atatctctaaatcattttgttttataataaatgtaataaactggcttaaagctaagagataaaagatcaaaccatagaaagatccactcttgatagcatc 34434600  T
Q  433 ttgattagcatcaccaagagcagccccttccaaatacttgtctgccaattgaactctcttcacattttcttgttcttggacaagcatgttaccatactcc 532  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34434601 ttgattagcatcaccaagagcagccccttccaaatacttgtctgccaattgaactctcttcacattttcttgttcttggacaagcatgttaccatactcc 34434700  T
Q  533 aacagtttctccaaactcatcttgggttgatcaaaagttggaggtccttcttttgagttcacaagctttttcccaatggtttcaatgccaacaccagcaa 632  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34434701 aacagtttctccaaactcatcttgggttgatcaaaagttggaggtccttcttttgagttcacaagctttttcccaatggtttcaatgccaacaccagcaa 34434800  T
Q  633 tccactttctcacttcatcatcgtatactcttgccctaagtgcaccaaagaaatctgtaaaaaataagagagttgagccaacagtcgatttgtcgggtcc 732  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34434801 tccactttctcacttcatcatcatatactcttgccctaagtgcaccaaagaaatctgtaaaaaataagagagttgagccaacagtcgatttgtcgggtcc 34434900  T
Q  733 aaattttgaatcaaatacataattttttatgaccgaactttctcttatttataagatcgaatgaagtaattaaaaaagtttcaacattctagaagagaac 832  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34434901 aaattttgaatcaaatacataattttttatgaccgaactttctcttatttataagatcgaatgaagtaattaaaaaagtttcaacattctagaagagaac 34435000  T
Q  833 ttaccaatggattgaccagggaaagtgtcaacaatcttaacaacatcttcctcaggaacattatcatgtctaaaaatccctttacaaacaccaa 926  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34435001 ttaccaatggattgaccagggaaagtgtcaacaatcttaacaacatcttcctcaggaacattatcatgtctaaaaatccctttacaaacaccaa 34435094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 5195092 - 5195220
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgc-aatgtct 176  Q
    ||||| |||||| || | |||| |||||||||||||||| |||||||||||||||||| |||||||||||  ||||| |  |||| ||||||   |||||    
T  5195092 gtcaagtagtctagtagttggaactcacacattttaaatatagagaagtgaggtgtctgaggttcgaacctcaacccctacatatattatgcgtttgtct 5195191  T
Q  177 ctactaaatgagctaagctcatggagacg 205  Q
    |||| || ||||||| |||||| ||||||    
T  5195192 ctaccaactgagctatgctcatagagacg 5195220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 197
Target Start/End: Original strand, 39799977 - 39800096
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctc 177  Q
    |||||||||||| ||||||| |||||||||||||||||||| |||||||| ||||||   ||||||| |||   ||| || |||  ||||||| |||| |    
T  39799977 gtcaaatagtctagtggctgaagctcacacattttaaatgtggagaagtggggtgtcaggggttcgagcccctgcccctgcataaattatgcattgtccc 39800076  T
Q  178 tactaaatgagctaagctca 197  Q
    ||| || |||||||||||||    
T  39800077 taccaactgagctaagctca 39800096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 200
Target Start/End: Complemental strand, 8241153 - 8241051
Alignment:
Q  98 gagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagctaagctca 197  Q
    ||||||||||||||||||||| |||||||| ||||||   |||||||||||  |||| || ||||  |||||||| || |||| || |||||||||||||    
T  8241153 gagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccgacccttgcatataatatgcaatatccctaccaactgagctaagctca 8241054  T
Q  198 tgg 200  Q
    |||    
T  8241053 tgg 8241051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 6734686 - 6734742
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtc 134  Q
    ||||| |||||| |||||||||||||||||||||||||||| |||||||| ||||||    
T  6734686 gtcaattagtctagtggctggagctcacacattttaaatgtggagaagtggggtgtc 6734742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 3741064 - 3741007
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||||||||||||||||||||||||| |||||||| ||||||   |||||||||||    
T  3741064 gtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccc 3741007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 4418302 - 4418359
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||| ||||||||||||||||||||||| ||||| |||||||||  ||||||||||||    
T  4418302 gtggttggagctcacacattttaaatgtggagaaatgaggtgtccgaggttcgaaccc 4418359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 186
Target Start/End: Original strand, 20707734 - 20707842
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctc 177  Q
    |||||||| |||  ||||| ||||||||||| ||||| ||| ||||||||| ||||||  ||||||||||| ||||| || ||||  |||||||| || |    
T  20707734 gtcaaataatctaatggctagagctcacacaatttaattgtggagaagtgaagtgtctggggttcgaaccccaacccctgcatatagtatgcaatatccc 20707833  T
Q  178 tactaaatg 186  Q
    ||| |||||    
T  20707834 taccaaatg 20707842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 133
Target Start/End: Original strand, 885105 - 885160
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgt 133  Q
    ||||| |||||| |||| ||||||||||||||||||||| | ||||||||||||||    
T  885105 gtcaagtagtctagtggttggagctcacacattttaaatatggagaagtgaggtgt 885160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 6167322 - 6167279
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtc 134  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  6167322 gtggctagagctcacacattttaaatgtggagaagtgaggtgtc 6167279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 15241519 - 15241400
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctc 177  Q
    ||||| |||||| |||||| ||||||||||| ||||| ||| |||||||| ||||||  ||||||||||||  |||| || ||||  |||||||| |  |    
T  15241519 gtcaagtagtctagtggctagagctcacacaatttaattgtggagaagtggggtgtccgaggttcgaaccccgacccctgcatataatatgcaatattcc 15241420  T
Q  178 tactaaatgagctaagctca 197  Q
    ||  || |||||||||||||    
T  15241419 tatcaactgagctaagctca 15241400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 148
Target Start/End: Complemental strand, 6119988 - 6119918
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||||||| | |||||| ||||||||||| ||||| ||| || |||||| ||||| |||||||||||||    
T  6119988 gtcaaatagtatggtggctagagctcacacaatttaattgttgaaaagtgaagtgtccaaggttcgaaccc 6119918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 197
Target Start/End: Complemental strand, 24477934 - 24477829
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagct 190  Q
    |||||||||||||||||| || |||||| |||||||| ||||||  |||||||||||  |  || || |||| |||||||| ||| |||| || ||||||    
T  24477934 gtggctggagctcacacaatt-aaatgtggagaagtggggtgtccgaggttcgaaccacataccctgcatatattatgcaacgtccctaccaactgagct 24477836  T
Q  191 aagctca 197  Q
    |||||||    
T  24477835 aagctca 24477829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 7443449 - 7443392
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||| ||||||||||||||| ||||||| |||||||| |||||| | |||||||||||    
T  7443449 gtggttggagctcacacattataaatgtggagaagtggggtgtcaagggttcgaaccc 7443392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 11897373 - 11897252
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| |||||| |||||| ||||||||||| ||||| ||| ||||||||  |||||   |||||||||||  || | || ||||  |||||||| ||    
T  11897373 tggtcaagtagtctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatc 11897274  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||||||||||||    
T  11897273 cctaccaactgagctaagctca 11897252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 127
Target Start/End: Original strand, 33372949 - 33372998
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtg 127  Q
    ||||| |||||| |||||||||||| ||||||||||||||| ||||||||    
T  33372949 gtcaagtagtctagtggctggagcttacacattttaaatgtggagaagtg 33372998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 35317375 - 35317431
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||||||| |||||||||| ||||||  ||||||||||||||||||||| ||||||    
T  35317375 gtggctggagttcacacattt-aaatgtgaagaagtgaggtgtctaaggtttgaaccc 35317431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 151
Target Start/End: Complemental strand, 37104193 - 37104120
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaa 151  Q
    |||||||| ||| |||| |  |||||||||||||||||| |  ||||||| | |||||||||||||||||||||    
T  37104193 gtcaaataatctagtggttaaagctcacacattttaaatatgaagaagtgtgatgtctaaggttcgaaccctaa 37104120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 41930215 - 41930158
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||| ||||||||||| ||||| |||||||||||| |||||||  |||||||||||    
T  41930215 gtggctagagctcacacaatttaattgtagagaagtggggtgtctggggttcgaaccc 41930158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 3821381 - 3821417
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtg 127  Q
    |||||||||||||||||||||||||||| ||||||||    
T  3821381 gtggctggagctcacacattttaaatgtggagaagtg 3821417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 18928828 - 18928724
Alignment:
Q  93 ggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagctaa 192  Q
    |||| ||||||||||| ||||||||| || ||||||||||||   ||||||||| |  |||| || |||  ||||||||| || |||| || ||||||||    
T  18928828 ggctagagctcacacaatttaaatgtggaaaagtgaggtgtccgtggttcgaacaccgacccctgcataaattatgcaatatccctaccaactgagctaa 18928729  T
Q  193 gctca 197  Q
    |||||    
T  18928728 gctca 18928724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 135
Target Start/End: Complemental strand, 14970384 - 14970345
Alignment:
Q  96 tggagctcacacattttaaatgtagagaagtgaggtgtct 135  Q
    ||||||| |||||||||||||||||||||||| |||||||    
T  14970384 tggagcttacacattttaaatgtagagaagtggggtgtct 14970345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 197
Target Start/End: Complemental strand, 3198417 - 3198331
Alignment:
Q  111 ttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagctaagctca 197  Q
    |||||||| |||||||  ||||||   ||||||||||  ||||| || |||| |||||||||||| |||| || |||||||||||||    
T  3198417 ttaaatgtggagaagtagggtgtccggggttcgaacctcaacccctgcatatattatgcaatgtccctaccaactgagctaagctca 3198331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 17891818 - 17891876
Alignment:
Q  91 gtggctggagctcacacatttt-aaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||||||||||||||||||| |||||| |||||||| ||||||   |||||||||||    
T  17891818 gtggctggagctcacacattttaaaatgtggagaagtggggtgtccggggttcgaaccc 17891876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 197
Target Start/End: Complemental strand, 18597518 - 18597413
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagct 190  Q
    |||||| |||||||||||||||||||   ||||||||||||||||  || |||||||| ||||| | |||||  |||||||| || |||| || ||| ||    
T  18597518 gtggctagagctcacacattttaaatag-gagaagtgaggtgtctgggggtcgaaccccaacccctatatataatatgcaatatccctaccaattgaact 18597420  T
Q  191 aagctca 197  Q
    || ||||    
T  18597419 aaactca 18597413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 38097388 - 38097326
Alignment:
Q  86 gtcttgtggctggagctcacacattttaaatgtagagaagt-gaggtgtctaaggttcgaacc 147  Q
    |||| |||||| ||||||||||||||||||||| ||||||| | ||||||| | |||||||||    
T  38097388 gtctagtggctagagctcacacattttaaatgtggagaagtgggggtgtctgatgttcgaacc 38097326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 193
Target Start/End: Original strand, 7545367 - 7545460
Alignment:
Q  100 gctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagctaag 193  Q
    ||||||||||||||||||| |||||||| ||||||   | |||||| ||| |||| || ||||  |||||||||| | |||||| ||| |||||    
T  7545367 gctcacacattttaaatgtggagaagtggggtgtccgggattcgaatcctgacccctgcatataatatgcaatgtttgtactaactgaactaag 7545460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 21918177 - 21918056
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| ||| || ||| || ||||||||||| ||||| ||| ||||||||  ||||| | ||||||||||| | | | || ||||  |||||||| ||    
T  21918177 tggtcaagtagcctagtgactagagctcacacaatttaattgtggagaagtggagtgtccagggttcgaaccccagctcctgcatataatatgcaatatc 21918078  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||||||||||||    
T  21918077 cctaccaactgagctaagctca 21918056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 23937893 - 23937950
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    ||||||| |||||||||||||||||||| ||| |||| ||||||   |||||||||||    
T  23937893 gtggctgtagctcacacattttaaatgtggaggagtggggtgtccggggttcgaaccc 23937950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 33909115 - 33909058
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||||||||||| ||||||||||||| |||||||  ||||||   |||||||||||    
T  33909115 gtggctggagctcatacattttaaatgtggagaagttgggtgtccggggttcgaaccc 33909058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 133; Significance: 1e-68; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 425 - 689
Target Start/End: Original strand, 30665310 - 30665574
Alignment:
Q  425 atagcatcttgattagcatcaccaagagcagccccttccaaatacttgtctgccaattgaactctcttcacattttcttgttcttggacaagcatgttac 524  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  30665310 atagcatcttgattagcatcaccaagagcagcaccttccaaatacttgtctgccaattgaactctcttcacattctcttgttctgagacaagcatgttac 30665409  T
Q  525 catactccaacagtttctccaaactcatcttgggttgatcaaaagttggaggtccttcttttgagttcacaagctttttcccaatggtttcaatgccaac 624  Q
    |||||||||| || || || |   ||||||| || || |||||   ||| ||||| || ||||||||||||||||| || ||||| |||||||| |||||    
T  30665410 catactccaatagcttttctagtgtcatctttggctgctcaaacactggtggtccgtcctttgagttcacaagcttctttccaattgtttcaataccaac 30665509  T
Q  625 accagcaatccactttctcacttcatcatcgtatactcttgccctaagtgcaccaaagaaatctg 689  Q
     |||| || |||||| ||||||||||||||||| ||||| ||||| | |||||| ||||||||||    
T  30665510 tccagaaacccacttcctcacttcatcatcgtacactctagccctcaatgcaccgaagaaatctg 30665574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 8488544 - 8488480
Alignment:
Q  84 tagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||| || ||||||||||||||||||||||||| ||||||||||||||| | |||||||||||    
T  8488544 tagtctagtagctggagctcacacattttaaatgtggagaagtgaggtgtcaagggttcgaaccc 8488480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 148
Target Start/End: Original strand, 40723631 - 40723677
Alignment:
Q  102 tcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  40723631 tcacacattttaaatgtggagaagtgaggtgtctaaggttcgaaccc 40723677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 170
Target Start/End: Original strand, 25883935 - 25884027
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgca 170  Q
    ||||| ||| || |||||||||||||||||||||||||||| |||||||| ||||||   |||||||||||  |||| || |||| |||||||    
T  25883935 gtcaagtagcctagtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcatatattatgca 25884027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 195
Target Start/End: Complemental strand, 26942862 - 26942759
Alignment:
Q  92 tggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagcta 191  Q
    ||||| ||||||||||| ||||| |||||||||||| |||||||  ||||||||||||  ||| || ||||  |||||||| || |||| || |||||||    
T  26942862 tggctagagctcacacaatttaattgtagagaagtggggtgtctgcggttcgaaccctggcccctgcatataatatgcaatatccctaccaactgagcta 26942763  T
Q  192 agct 195  Q
    ||||    
T  26942762 agct 26942759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 41710693 - 41710650
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtc 134  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  41710693 gtggctggagctcacacattttaaatgtggagaagtgaggtgtc 41710650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 197
Target Start/End: Complemental strand, 14795221 - 14795115
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagct 190  Q
    |||| ||||||||||||||||||||||| |||||||| ||||||   |||| |||||||  | | || |||| |||||||||||| |||| || | ||||    
T  14795221 gtggttggagctcacacattttaaatgtggagaagtggggtgtccggggtttgaaccctggcacctgcatatattatgcaatgtcactaccaactaagct 14795122  T
Q  191 aagctca 197  Q
    |||||||    
T  14795121 aagctca 14795115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 16231839 - 16231909
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    ||||| |||||| ||||||||||||| |||||||||||| | |||||||| ||| |||| |||||||||||    
T  16231839 gtcaagtagtctagtggctggagctcgcacattttaaatatggagaagtggggtatctagggttcgaaccc 16231909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 197
Target Start/End: Complemental strand, 16886692 - 16886586
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagct 190  Q
    ||||||||||||||||||||||||| || || ||||| ||||||| ||||| ||| ||   ||| ||||||   ||||||||||| |||| || ||||||    
T  16886692 gtggctggagctcacacattttaaacgtggaaaagtggggtgtctgaggtttgaatcccggcccctgtatacaatatgcaatgtccctaccaactgagct 16886593  T
Q  191 aagctca 197  Q
    |||||||    
T  16886592 aagctca 16886586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 154
Target Start/End: Original strand, 40739156 - 40739234
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaaccc 154  Q
    ||||||| |||||| |||||| ||||||||||||||||||  | |||||||||||||||  | |||||||||| |||||    
T  40739156 tggtcaagtagtctagtggctagagctcacacattttaaacatggagaagtgaggtgtccgaagttcgaacccaaaccc 40739234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 197
Target Start/End: Original strand, 48739692 - 48739810
Alignment:
Q  79 tcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctct 178  Q
    |||| |||||| |||||| ||||||||||| ||||| ||| |||||||| |||||||  ||||||||||| | ||| || ||||   ||||||| || ||    
T  48739692 tcaagtagtctagtggctagagctcacacagtttaattgtggagaagtggggtgtctggggttcgaaccccagcccctgcatataaaatgcaatatccct 48739791  T
Q  179 actaaatgagctaagctca 197  Q
    || || |||||||||||||    
T  48739792 accaactgagctaagctca 48739810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 200
Target Start/End: Complemental strand, 6488234 - 6488125
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagct 190  Q
    |||||| ||||||||||| || || ||| ||||||||  ||||||  ||||||||||||| ||| || ||||  |||||||| || |||| || ||||||    
T  6488234 gtggctagagctcacacaattaaattgtggagaagtggagtgtctggggttcgaaccctagcccctgcatataatatgcaatatccctaccaattgagct 6488135  T
Q  191 aagctcatgg 200  Q
    ||||||||||    
T  6488134 aagctcatgg 6488125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 15085644 - 15085701
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||||||||||||||||||||||| | |||||||||||||||   |||||||||||    
T  15085644 gtggctggagctcacacattttaaatatggagaagtgaggtgtccggggttcgaaccc 15085701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 27329892 - 27329949
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||||||||||||||||||||||||| |||||||| ||||||   |||||||||||    
T  27329892 gtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccc 27329949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 36478148 - 36478205
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||||||||||||||||||| ||||| |||||||||| ||||  ||||||||||||    
T  36478148 gtggctggagctcacacatttttaatgtggagaagtgagatgtccgaggttcgaaccc 36478205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 51879205 - 51879148
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||||||||||||||||||||||||| |||||||| ||||||   |||||||||||    
T  51879205 gtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccc 51879148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 147
Target Start/End: Original strand, 4807993 - 4808061
Alignment:
Q  79 tcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaacc 147  Q
    |||| |||||| |||| | |||||||||||||||||||||||||||||| |||||  | ||||||||||    
T  4807993 tcaagtagtctagtggttagagctcacacattttaaatgtagagaagtggggtgttcagggttcgaacc 4808061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 197
Target Start/End: Original strand, 3748547 - 3748668
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| ||| || |||||| ||||||||||| || || ||| |||||||||| ||||   ||||||||||| ||||| || ||||  ||| |||| ||    
T  3748547 tggtcaagtagcctagtggctagagctcacacaattaaattgtggagaagtgagatgtccggggttcgaaccccaacccctgcatataatatacaatatc 3748646  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||||||||||||    
T  3748647 cctaccaactgagctaagctca 3748668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 135
Target Start/End: Complemental strand, 9114134 - 9114077
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtct 135  Q
    ||||| ||| || ||| |||||||||||||||||||||||| |||||||| |||||||    
T  9114134 gtcaagtagcctagtgactggagctcacacattttaaatgtggagaagtggggtgtct 9114077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 197
Target Start/End: Original strand, 18764814 - 18764933
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||| ||||| || |||||| ||||||||||| |||||||||||||||||| |||||| |  ||||||||||| |||  || |||  ||||||||||||    
T  18764814 tggtctaatagcctagtggctagagctcacaca-tttaaatgtagagaagtg-ggtgtccagtgttcgaaccctgaccactgcataaattatgcaatgtc 18764911  T
Q  176 tctactaaatgagctaagctca 197  Q
      | | || |||||||||||||    
T  18764912 cttgccaattgagctaagctca 18764933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 197
Target Start/End: Original strand, 22501876 - 22501997
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| ||| || |||||| ||||||||||| || || ||| ||||||||  ||||||  ||||||||||| | ||| || ||||  |||||||| ||    
T  22501876 tggtcaagtagcctagtggctagagctcacacaattaaattgtggagaagtggagtgtctggggttcgaaccccagcccctgcatataatatgcaatatc 22501975  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||||||||||||    
T  22501976 cctaccaactgagctaagctca 22501997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 197
Target Start/End: Original strand, 34898712 - 34898833
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| || ||| |||||| ||||||||||| ||||| ||| |||||||| |||||||  ||||||||||  | ||| || ||||  |||||||| ||    
T  34898712 tggtcaagtaatctagtggctagagctcacacaatttaattgtggagaagtggggtgtctggggttcgaacctcagcccctgcatataatatgcaatatc 34898811  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || ||| |||||||||    
T  34898812 cctaccaactgaactaagctca 34898833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 197
Target Start/End: Original strand, 39966035 - 39966140
Alignment:
Q  92 tggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagcta 191  Q
    ||||| ||||||||||| || || ||| ||||||||  |||||| |||||||||||  ||||| || ||||  |||||||| || |||| || |||||||    
T  39966035 tggctagagctcacacaattaaattgtggagaagtggagtgtctgaggttcgaacctcaacccctgcatataatatgcaatatccctaccaactgagcta 39966134  T
Q  192 agctca 197  Q
    ||||||    
T  39966135 agctca 39966140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 199
Target Start/End: Complemental strand, 16991938 - 16991838
Alignment:
Q  99 agctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagctaagctcat 198  Q
    |||||||||||||||||| | |||||||||| |||||   ||| ||| | |||||| | ||||| |||| |||| ||||||| || |||| |||||||||    
T  16991938 agctcacacattttaaatatggagaagtgagatgtctggagtttgaaacttaacccctatatatattatacaatatctctaccaattgagataagctcat 16991839  T
Q  199 g 199  Q
    |    
T  16991838 g 16991838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 39709148 - 39709112
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtg 127  Q
    |||||||||||||||||||||||||||| ||||||||    
T  39709148 gtggctggagctcacacattttaaatgtggagaagtg 39709112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 46767453 - 46767417
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtg 127  Q
    |||||||||||||||||||||||||||| ||||||||    
T  46767453 gtggctggagctcacacattttaaatgtggagaagtg 46767417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 4860286 - 4860215
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaacc 147  Q
    ||||||| |||||| |||| | ||||||||||| ||||| ||| |||||||| |||||||  ||||||||||    
T  4860286 tggtcaagtagtctagtggttagagctcacacaatttaattgtggagaagtggggtgtctggggttcgaacc 4860215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 4880294 - 4880223
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaacc 147  Q
    ||||||| |||||| |||| | ||||||||||| ||||| ||| |||||||| |||||||  ||||||||||    
T  4880294 tggtcaagtagtctagtggttagagctcacacaatttaattgtggagaagtggggtgtctggggttcgaacc 4880223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 148
Target Start/End: Complemental strand, 8497123 - 8497072
Alignment:
Q  97 ggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    ||||||| |||||||||||||| |||||||| |||||| | |||||||||||    
T  8497123 ggagctcgcacattttaaatgtggagaagtggggtgtcaagggttcgaaccc 8497072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 127
Target Start/End: Original strand, 36472384 - 36472427
Alignment:
Q  84 tagtcttgtggctggagctcacacattttaaatgtagagaagtg 127  Q
    |||||| |||||||||||||||||||||| ||||| ||||||||    
T  36472384 tagtctagtggctggagctcacacatttttaatgtggagaagtg 36472427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 195
Target Start/End: Original strand, 41936352 - 41936471
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| ||| || |||||| ||||||||||| ||||| ||| |||||||| ||||||   |||||||||||   ||| || ||||  |||||||| ||    
T  41936352 tggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatc 41936451  T
Q  176 tctactaaatgagctaagct 195  Q
     |||| || |||||||||||    
T  41936452 cctaccaactgagctaagct 41936471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 147
Target Start/End: Complemental strand, 47098632 - 47098570
Alignment:
Q  84 tagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaacc 147  Q
    |||||| |||||||||||||||| | || |||||| ||||||||||||||||  ||||||||||    
T  47098632 tagtctagtggctggagctcacataatt-aaatgtggagaagtgaggtgtctggggttcgaacc 47098570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 197
Target Start/End: Complemental strand, 48546276 - 48546177
Alignment:
Q  98 gagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagctaagctca 197  Q
    ||||||||||| ||||| |||||||||||||||||||   |||||||||||  | || |  ||||  |||||||| || |||| || |||||||||||||    
T  48546276 gagctcacacaatttaattgtagagaagtgaggtgtccggggttcgaaccccgatccctacatataatatgcaatatcactaccaactgagctaagctca 48546177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 197
Target Start/End: Original strand, 50675689 - 50675808
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctc 177  Q
    ||||| ||| || |||||| ||||||||||| ||||| ||| |||||||| |||||| |  |||||||||  ||||| |||||||  |||||||| || |    
T  50675689 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccagagttcgaaccacaacccctgtatataatatgcaatatccc 50675788  T
Q  178 tactaaatgagctaagctca 197  Q
    ||| || |||| ||| ||||    
T  50675789 taccaactgagataaactca 50675808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 145
Target Start/End: Original strand, 52410180 - 52410255
Alignment:
Q  70 ttcttgtggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaa 145  Q
    ||||| ||||||| |||||| |||||| ||||||||||| ||||| ||| ||||||||  ||||||  ||||||||    
T  52410180 ttcttttggtcaagtagtctagtggctagagctcacacaatttaattgtggagaagtggagtgtctggggttcgaa 52410255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 8171663 - 8171757
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaat 172  Q
    ||||| ||| || |||||| ||||| ||||||||||| |||||| ||||| ||||| || ||||||||| | ||||| | |||||  ||||||||    
T  8171663 gtcaagtagcctagtggctagagcttacacattttaattgtagaaaagtggggtgtttagggttcgaactccaacccctatatataatatgcaat 8171757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 146
Target Start/End: Complemental strand, 10828579 - 10828525
Alignment:
Q  92 tggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaac 146  Q
    |||||||| |||||||||||| ||||| |||||||| |||||||  |||||||||    
T  10828579 tggctggaactcacacatttttaatgtggagaagtggggtgtctggggttcgaac 10828525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 148
Target Start/End: Complemental strand, 17729114 - 17729044
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    ||||| |||||| |||||| ||||||||||| ||||| ||| ||||||||  ||||| | |||||||||||    
T  17729114 gtcaagtagtctagtggctagagctcacacaatttaattgtggagaagtggagtgtccagggttcgaaccc 17729044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 148
Target Start/End: Complemental strand, 19030343 - 19030273
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    ||||| |||||| |||||| ||||||||||| ||||| ||| ||||||||  ||||| | |||||||||||    
T  19030343 gtcaagtagtctagtggctagagctcacacaatttaattgtggagaagtggagtgtccagggttcgaaccc 19030273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 174
Target Start/End: Original strand, 23653170 - 23653259
Alignment:
Q  84 tagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgt 174  Q
    |||||| |||||| ||||||||||||||| ||||| || |||||||||||    |||||||||||  |||| || |||| |||||||||||    
T  23653170 tagtctagtggctagagctcacacatttt-aatgtggataagtgaggtgttcggggttcgaaccccgacccctgcatatattatgcaatgt 23653259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 30779527 - 30779633
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagct 190  Q
    |||||| || |||||||| || || ||| |||||||| |||||| | |||||||||||  |||| || ||||  |||||||| || |||| || ||||||    
T  30779527 gtggctagaactcacacaattaaattgtggagaagtggggtgtccagggttcgaaccccgacccctgcatataatatgcaatatccctaccaactgagct 30779626  T
Q  191 aagctca 197  Q
    |||||||    
T  30779627 aagctca 30779633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 174
Target Start/End: Complemental strand, 32023539 - 32023442
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgt 174  Q
    ||||||| |||||| ||||||| | ||||||||||||||||||  |||| |||||||| |  ||||| ||| ||| ||| || |||| |||||||||||    
T  32023539 tggtcaagtagtctagtggctgaaactcacacattttaaatgtgaagaaatgaggtgtatggggttcaaactctagccc-tgcatatattatgcaatgt 32023442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 41253709 - 41253751
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgt 133  Q
    |||||||||||||||||||||||||| | || |||||||||||    
T  41253709 gtggctggagctcacacattttaaatatggaaaagtgaggtgt 41253751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 197
Target Start/End: Complemental strand, 47098842 - 47098736
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagct 190  Q
    |||||| ||||||||||| ||||| ||| ||||||||  ||||||  |||||||||||   ||| || ||||  |||||||| || |||| || ||||||    
T  47098842 gtggctagagctcacacaatttaattgtggagaagtggagtgtctggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagct 47098743  T
Q  191 aagctca 197  Q
    |||||||    
T  47098742 aagctca 47098736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 5641574 - 5641631
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||| ||||||||||| ||||| |||  ||||||||||||||  ||||||||||||    
T  5641574 gtggctagagctcacacaatttaattgtgaagaagtgaggtgtccgaggttcgaaccc 5641631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 8762024 - 8762097
Alignment:
Q  76 tggtcaaatagtcttgtggctggagc-tcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    ||||||| |||||| |||||| |||| ||||||| ||||| ||| |||||||| |||||| | |||||||||||    
T  8762024 tggtcaagtagtctagtggctagagcctcacacaatttaattgtggagaagtggggtgtccatggttcgaaccc 8762097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 17278319 - 17278360
Alignment:
Q  156 tgtatattttatgcaatgtctctactaaatgagctaagctca 197  Q
    ||||||||||||||| |||||||||||| |||| ||||||||    
T  17278319 tgtatattttatgcattgtctctactaattgagttaagctca 17278360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 23090363 - 23090306
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    ||||||||||||||||||||||  |||| |||||||| |||||||  | |||||||||    
T  23090363 gtggctggagctcacacattttttatgtggagaagtggggtgtctgggattcgaaccc 23090306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 26880279 - 26880203
Alignment:
Q  98 gagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    |||||||||||||| |||||| |||||||| ||||||| | ||||||||||  |||| || |||  ||||||||||||    
T  26880279 gagctcacacattt-aaatgtggagaagtggggtgtctgaagttcgaaccccgacccctgcataaattatgcaatgtc 26880203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 29373417 - 29373466
Alignment:
Q  99 agctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||||||| ||||| ||| |||||||| ||||||| ||||||||||||    
T  29373417 agctcacacaatttaattgtggagaagtggggtgtctgaggttcgaaccc 29373466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 39720060 - 39719939
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| ||| || |||||| ||||||||||| ||||| ||| |||||||| ||||||   |||||||||||   ||| || ||||  |||||||| ||    
T  39720060 tggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatc 39719961  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||||||| ||||    
T  39719960 cctaccaactgagctaaactca 39719939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 44625185 - 44625242
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||| |||||||| |||||||||||||| |||||||| ||||||   |||||||||||    
T  44625185 gtggttggagctcccacattttaaatgtggagaagtggggtgtccggggttcgaaccc 44625242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 197
Target Start/End: Complemental strand, 52984119 - 52984014
Alignment:
Q  92 tggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagcta 191  Q
    ||||| ||||||||||| ||||| ||||||||||||  |||||   |||||||||||  |||| || |||   |||||||| || |||| || |||||||    
T  52984119 tggctagagctcacacaatttaattgtagagaagtggagtgtccggggttcgaaccccgacccttgcatacaatatgcaatatccctaccaactgagcta 52984020  T
Q  192 agctca 197  Q
    ||||||    
T  52984019 agctca 52984014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 2e-27; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 470 - 609
Target Start/End: Original strand, 6852822 - 6852961
Alignment:
Q  470 ttgtctgccaattgaactctcttcacattttcttgttcttggacaagcatgttaccatactccaacagtttctccaaactcatcttgggttgatcaaaag 569  Q
    ||||| || ||||| || ||||||||||| |||||||||||||||||||| || |||||||| |  ||||| || | | ||||||| ||||| |||||||    
T  6852822 ttgtcagctaattggaccctcttcacattctcttgttcttggacaagcatatttccatactctagtagtttgtcaatagtcatctttggttgctcaaaag 6852921  T
Q  570 ttggaggtccttcttttgagttcacaagctttttcccaat 609  Q
    |||||||||| |||||||| ||||||||| ||||||||||    
T  6852922 ttggaggtccctcttttgaattcacaagccttttcccaat 6852961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 35465558 - 35465439
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctc 177  Q
    ||||| ||| || |||||| ||||||| ||| ||||| ||| |||||||| |||||||||  ||||||||||||||| |||||||   ||||||| || |    
T  35465558 gtcaagtagcctagtggctagagctcatacaatttaattgtggagaagtggggtgtctaaaattcgaaccctaacccctgtatataaaatgcaatatccc 35465459  T
Q  178 tactaaatgagctaagctca 197  Q
    ||| || |||||||||||||    
T  35465458 taccaactgagctaagctca 35465439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 30305909 - 30305852
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||||||||||||||||||||||||| |||||||||||||||   |||||||||||    
T  30305909 gtggctggagctcacacattttaaatgtggagaagtgaggtgtccggggttcgaaccc 30305852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 197
Target Start/End: Original strand, 33933684 - 33933805
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| ||| || ||||||  ||||||||||| |||||||| |||||||| |||||| | || ||||||||   ||| || |||| ||||||||||||    
T  33933684 tggtcaagtagcctagtggctatagctcacacatattaaatgtggagaagtggggtgtccaggggtcgaaccccggcccctgcatatattatgcaatgtc 33933783  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||||||||||||    
T  33933784 cctaccaactgagctaagctca 33933805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 134
Target Start/End: Original strand, 37442018 - 37442076
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtc 134  Q
    |||||||||||| | |||||||||||||||| ||||||||| |||||||||| ||||||    
T  37442018 tggtcaaatagtttagtggctggagctcacaaattttaaatatagagaagtgcggtgtc 37442076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 189
Target Start/End: Original strand, 41137880 - 41137978
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagc 189  Q
    |||||| ||||||| ||||||||||| |  ||||||| |||||||  ||||||||||| ||||| || |||| |||||||||||| |||| || |||||    
T  41137880 gtggctagagctcaaacattttaaatatgaagaagtggggtgtctgtggttcgaaccccaacccctgcatatattatgcaatgtccctaccaactgagc 41137978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 3785027 - 3784916
Alignment:
Q  84 tagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaa 183  Q
    |||||| |||||||||||||||||| ||||||||| |||||||| |||||    |||||||||||| |||| || |||  ||||||||| || |||| ||    
T  3785027 tagtctagtggctggagctcacaca-tttaaatgtggagaagtgtggtgttcggggttcgaaccctgaccc-tgcataaattatgcaatatccctaccaa 3784930  T
Q  184 atgagctaagctca 197  Q
     |||||||||||||    
T  3784929 ttgagctaagctca 3784916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 36099143 - 36099200
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||||||||||||||||||||||||| |||||||| ||||||   |||||||||||    
T  36099143 gtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccc 36099200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 2860699 - 2860747
Alignment:
Q  98 gagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaac 146  Q
    ||||||||||||||||||| | |||||||||| ||||||||||||||||    
T  2860699 gagctcacacattttaaatatggagaagtgagatgtctaaggttcgaac 2860747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 4513387 - 4513455
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaac 146  Q
    |||||||||||| ||||   ||||||||||||||||||||| |||||||||||||  | ||||||||||    
T  4513387 gtcaaatagtctagtggtcagagctcacacattttaaatgtggagaagtgaggtggatgaggttcgaac 4513455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 50376612 - 50376715
Alignment:
Q  93 ggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagctaa 192  Q
    |||||||||||||||||||||||||| || |||||| |||| |  |||||||||||   ||| || |||| ||||||||||||||||| || |||| |||    
T  50376612 ggctggagctcacacattttaaatgtgga-aagtgaagtgtttggggttcgaaccccttcccctgcatatattatgcaatgtctctaccaactgagttaa 50376710  T
Q  193 gctca 197  Q
     ||||    
T  50376711 actca 50376715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 10402564 - 10402445
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctc 177  Q
    ||||| ||| || |||||| ||||||||||| ||||| ||| |||||||||||||||   ||||||||| |  |||| || ||||  |||||||| ||||    
T  10402564 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtgaggtgtccggggttcgaactccgacccctgcatataatatgcaatatctc 10402465  T
Q  178 tactaaatgagctaagctca 197  Q
    ||| || |||| ||||||||    
T  10402464 taccaactgagttaagctca 10402445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 32898553 - 32898490
Alignment:
Q  85 agtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    ||||| |||||||||||||||||||||||||| | |||||||  |||||| || ||||||||||    
T  32898553 agtctagtggctggagctcacacattttaaatatggagaagtatggtgtccaatgttcgaaccc 32898490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 197
Target Start/End: Original strand, 37868514 - 37868633
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctc 177  Q
    |||||||||| | |||| | ||||||||||| ||||| ||| |||||||||||||||  |||||||||| | | ||| || ||||  |||||||| || |    
T  37868514 gtcaaatagtttagtggttagagctcacacaatttaattgtggagaagtgaggtgtccgaggttcgaactccagcccctgcatataatatgcaatatcac 37868613  T
Q  178 tactaaatgagctaagctca 197  Q
    |||||| | || ||||||||    
T  37868614 tactaactaagttaagctca 37868633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 40051745 - 40051626
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctc 177  Q
    ||||| ||| || |||||| ||||||||||| ||||| ||| |||||||| |||||||  |||||||||||  |||| |  ||||  |||||||| || |    
T  40051745 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtctggggttcgaacccctacccctacatataatatgcaatatccc 40051646  T
Q  178 tactaaatgagctaagctca 197  Q
    ||| || |||||||||||||    
T  40051645 taccaactgagctaagctca 40051626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 76 - 203
Target Start/End: Complemental strand, 55021679 - 55021552
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| |||||| |||||| ||||||||||| ||||| ||| ||||||||| |||||   |||||||||||  |||| || ||||  |||||||| |     
T  55021679 tggtcaagtagtctagtggctagagctcacacaatttaattgtggagaagtgaagtgtccggggttcgaaccccgacccctgcatataatatgcaatatt 55021580  T
Q  176 tctactaaatgagctaagctcatggaga 203  Q
     |||| || |||||||| ||| ||||||    
T  55021579 cctaccaactgagctaacctcgtggaga 55021552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 200
Target Start/End: Original strand, 10417168 - 10417290
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctc 177  Q
    ||||| |||||| |||||| ||||||||||| ||||| ||| ||||||||  |||||   |||||||||||| || | || ||||  |||| ||| || |    
T  10417168 gtcaagtagtctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccctgactcctgcatataatatgtaatatccc 10417267  T
Q  178 tactaaatgagctaagctcatgg 200  Q
    ||| || ||||||||||||||||    
T  10417268 taccaactgagctaagctcatgg 10417290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 8965219 - 8965098
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| ||| || |||| | ||||||||||| ||||| |||||||||||| ||||||   |||||||||||   ||| || ||||  |||||||| ||    
T  8965219 tggtcaagtagcctagtggttagagctcacacaatttaattgtagagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatc 8965120  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||||||||||||    
T  8965119 cctaccaactgagctaagctca 8965098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 200
Target Start/End: Complemental strand, 50512461 - 50512361
Alignment:
Q  99 agctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagctaagctcat 198  Q
    ||||||||||||| |||||| ||||||| |||||||  |||||||||||  ||||| || ||||  |||||||| |  |||| || ||||||||||||||    
T  50512461 agctcacacattt-aaatgtggagaagtaaggtgtcagaggttcgaacctcaacccctgcatataatatgcaatattcctaccaactgagctaagctcat 50512363  T
Q  199 gg 200  Q
    ||    
T  50512362 gg 50512361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 28715807 - 28715743
Alignment:
Q  84 tagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||| ||||||| |||||||||||||||||||| ||||||||  |||||   |||||||||||    
T  28715807 tagtctagtggctgaagctcacacattttaaatgtggagaagtggagtgtccggggttcgaaccc 28715743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 125
Target Start/End: Original strand, 35851649 - 35851697
Alignment:
Q  77 ggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaag 125  Q
    |||||| |||||| ||||||||||||| |||||||||||||| ||||||    
T  35851649 ggtcaagtagtctagtggctggagctcgcacattttaaatgtggagaag 35851697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 47929355 - 47929299
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaacc 147  Q
    |||||| ||||||||||||||||||||| |||||||| ||| ||  |||||||||||    
T  47929355 gtggctagagctcacacattttaaatgtggagaagtggggtttccgaggttcgaacc 47929299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 54215870 - 54215814
Alignment:
Q  92 tggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    ||||| ||||||||| ||||||||||| |||||||| |||||||  |||||||||||    
T  54215870 tggctagagctcacatattttaaatgtggagaagtggggtgtctggggttcgaaccc 54215814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 197
Target Start/End: Complemental strand, 624583 - 624484
Alignment:
Q  98 gagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagctaagctca 197  Q
    ||||||||||||||||||||| |||||||| ||||||   |||||||||||   ||| || |||  ||||||||||||  ||| || |||| ||||||||    
T  624583 gagctcacacattttaaatgtggagaagtggggtgtcaggggttcgaacccctgcccctgcataaattatgcaatgtccttaccaactgagttaagctca 624484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 3161132 - 3161089
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtc 134  Q
    ||||||| |||||||||||||||||||| ||||||||| |||||    
T  3161132 gtggctgtagctcacacattttaaatgtggagaagtgaagtgtc 3161089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 197
Target Start/End: Complemental strand, 9761246 - 9761119
Alignment:
Q  70 ttcttgtggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgc 169  Q
    ||||| ||||||| |||||| |||| | ||||||||||| ||||| ||| ||||||||| |||||   ||||||||||| | | | || ||||  |||||    
T  9761246 ttcttttggtcaagtagtctagtggttagagctcacacaatttaattgtggagaagtgaagtgtccggggttcgaaccccagctcctgcatataatatgc 9761147  T
Q  170 aatgtctctactaaatgagctaagctca 197  Q
    ||| || |||| || |||| ||||||||    
T  9761146 aatatccctaccaactgaggtaagctca 9761119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 197
Target Start/End: Original strand, 11375856 - 11375955
Alignment:
Q  98 gagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagctaagctca 197  Q
    ||||||||||||||||| ||| |||||||||||||||   |||||||||||   ||| || ||||  |||||||| || |||  || |||||||||||||    
T  11375856 gagctcacacattttaattgtggagaagtgaggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccctatcaactgagctaagctca 11375955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 197
Target Start/End: Original strand, 48569123 - 48569242
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctc 177  Q
    ||||| ||| || |||||| ||||||||||| || || ||| ||||||||  ||||||  ||||||||||| | ||| || ||||  |||||||| || |    
T  48569123 gtcaagtagcctagtggctagagctcacacaattaaattgtggagaagtggagtgtctggggttcgaaccccagcccctgcatataatatgcaatatccc 48569222  T
Q  178 tactaaatgagctaagctca 197  Q
    ||| || |||||||||||||    
T  48569223 taccaactgagctaagctca 48569242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 17435440 - 17435482
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgt 133  Q
    ||||||| ||||||||||||||| ||||||||||||| |||||    
T  17435440 gtggctgaagctcacacattttacatgtagagaagtggggtgt 17435482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 203
Target Start/End: Original strand, 25726259 - 25726381
Alignment:
Q  81 aaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctac 180  Q
    |||||| || |||| | |||||| |||| || || ||| ||||||||  |||||||||||||||||| |  ||| |||||||  |||||||| || ||||    
T  25726259 aaatagcctagtggttagagctcgcacaattaaattgtggagaagtggagtgtctaaggttcgaaccttgccccttgtatataatatgcaatatccctac 25726358  T
Q  181 taaatgagctaagctcatggaga 203  Q
     || |||||||||| || |||||    
T  25726359 caactgagctaagcccacggaga 25726381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 133
Target Start/End: Complemental strand, 39489896 - 39489854
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgt 133  Q
    |||||| |||| | |||||||||||||||||||||||||||||    
T  39489896 gtggctagagccctcacattttaaatgtagagaagtgaggtgt 39489854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 42381060 - 42381130
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    ||||| ||| || ||||||  |||||||||| ||||| ||| |||||||| ||||||| ||||||||||||    
T  42381060 gtcaagtagcctagtggctaaagctcacacaatttaattgtggagaagtggggtgtctgaggttcgaaccc 42381130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 47586321 - 47586275
Alignment:
Q  98 gagctcacacattttaaatgtagagaagtgaggtgtctaaggttcga 144  Q
    ||||||||||||||||||||| |||||||||| |||| || ||||||    
T  47586321 gagctcacacattttaaatgtggagaagtgagatgtccaatgttcga 47586275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 197
Target Start/End: Original strand, 7686223 - 7686328
Alignment:
Q  92 tggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagcta 191  Q
    ||||| ||||||||||| ||||| ||| ||||||||  ||||| | |||||||||||   ||| || ||||   ||||||| ||||||| || |||||||    
T  7686223 tggctagagctcacacaatttaattgtggagaagtggagtgtccagggttcgaaccccggcccctgcatataaaatgcaatatctctaccaactgagcta 7686322  T
Q  192 agctca 197  Q
    ||||||    
T  7686323 agctca 7686328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 195
Target Start/End: Complemental strand, 21935600 - 21935483
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctc 177  Q
    ||||| |||||| ||||||  |||||||||| ||||| ||| |||||||| ||||||   |||||||||||   ||| || ||||  |||||||| || |    
T  21935600 gtcaagtagtctagtggctaaagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatccc 21935501  T
Q  178 tactaaatgagctaagct 195  Q
    ||| || |||||||||||    
T  21935500 taccaactgagctaagct 21935483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 124
Target Start/End: Original strand, 23142713 - 23142746
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaa 124  Q
    |||||||||||||||||||||||||||| |||||    
T  23142713 gtggctggagctcacacattttaaatgtggagaa 23142746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 124
Target Start/End: Original strand, 23176682 - 23176715
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaa 124  Q
    |||||||||||||||||||||||||||| |||||    
T  23176682 gtggctggagctcacacattttaaatgtggagaa 23176715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 203
Target Start/End: Complemental strand, 30217722 - 30217597
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctc 177  Q
    ||||||||| || ||||||  |||||||||| ||||| ||| ||||| ||  ||||||  | ||||||| ||| ||| || ||||  |||||||| || |    
T  30217722 gtcaaatagcctagtggctaaagctcacacaatttaattgtggagaactggagtgtctgggattcgaactctagcccctgcatataatatgcaatatccc 30217623  T
Q  178 tactaaatgagctaagctcatggaga 203  Q
    ||| || ||||||||||||| |||||    
T  30217622 taccaactgagctaagctcacggaga 30217597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 200
Target Start/End: Original strand, 42134417 - 42134526
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagct 190  Q
    |||||| ||||||||| | ||||| ||| |||||||| ||||||    ||||||||||  |||| || ||||  |||||||| || ||||||| |||| |    
T  42134417 gtggctagagctcacataatttaattgtggagaagtggggtgtccggagttcgaaccccgacccttgcatataatatgcaatatccctactaactgagtt 42134516  T
Q  191 aagctcatgg 200  Q
    ||||||||||    
T  42134517 aagctcatgg 42134526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 149
Target Start/End: Original strand, 43271662 - 43271735
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccct 149  Q
    ||||||| ||| || ||||||  |||||||||| ||||| ||| |||||||| |||||||  ||||||||||||    
T  43271662 tggtcaagtagcctagtggctatagctcacacaatttaattgtggagaagtggggtgtctggggttcgaaccct 43271735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 49901607 - 49901486
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| ||| || |||||| ||||||||||| ||||| ||| |||||| | ||||||   |||||||||||   ||| || ||||  |||||||| ||    
T  49901607 tggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagcggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatc 49901508  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||||||||||||    
T  49901507 cctaccaactgagctaagctca 49901486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 51890921 - 51890801
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||| ||||| || |||||| ||||||||||| || |||||| |||||||| ||||||   |||||||||||   ||| || |||  ||||||||||||    
T  51890921 tggtctaatagcctagtggctagagctcacacaatt-aaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtc 51890823  T
Q  176 tctactaaatgagctaagctca 197  Q
     || | || |||||||||||||    
T  51890822 cctgccaactgagctaagctca 51890801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 201
Target Start/End: Complemental strand, 52557043 - 52556939
Alignment:
Q  96 tggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagctaagct 195  Q
    |||||||||||||||| ||| ||  ||||||| |||||    |||||||||||  |||  ||||||  ||||| |||||| |||| ||||||||||||||    
T  52557043 tggagctcacacattt-aaacgtgtagaagtggggtgttaggggttcgaaccccgacctctgtataaattatgtaatgtccctaccaaatgagctaagct 52556945  T
Q  196 catgga 201  Q
    ||||||    
T  52556944 catgga 52556939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 1e-19; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 78 - 148
Target Start/End: Complemental strand, 34873209 - 34873139
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||  ||||||||||||    
T  34873209 gtcaaatagtctagtggctggagctcacacattttaaatgtggagaagtggggtgtccgaggttcgaaccc 34873139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 40904654 - 40904578
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaaccc 154  Q
    |||| ||||||| ||||||| ||||| |||||||||||||| |||||||||||||||  |||||||||||| |||||    
T  40904654 gtcagatagtctagtggctgaagctcgcacattttaaatgtggagaagtgaggtgtccgaggttcgaaccccaaccc 40904578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 13105197 - 13105095
Alignment:
Q  95 ctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagctaagc 194  Q
    |||||||||||||||||||||||| |||||||| ||||||| ||||||||||||   ||| || |||| ||||||| |||| |||| || |||| ||| |    
T  13105197 ctggagctcacacattttaaatgtggagaagtggggtgtctgaggttcgaaccccggcccttgcatatattatgcattgtccctaccaactgagttaatc 13105098  T
Q  195 tca 197  Q
    |||    
T  13105097 tca 13105095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 197
Target Start/End: Original strand, 13059122 - 13059243
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| ||| || ||||||||||| |||||||||||||||| |||||||| ||||||   |||||||||||   ||| || |||  ||||||| ||||    
T  13059122 tggtcaagtagcctagtggctggagcacacacattttaaatgtggagaagtggggtgtcaggggttcgaacccctgcccctgcataaattatgcattgtc 13059221  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||||||||||||    
T  13059222 cctaccaactgagctaagctca 13059243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 36035139 - 36035196
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||||||||||||||||||||||||| |||||||| ||||||  ||||||||||||    
T  36035139 gtggctggagctcacacattttaaatgtggagaagtggggtgtccgaggttcgaaccc 36035196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 76 - 196
Target Start/End: Original strand, 24480766 - 24480886
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| |||||| |||||| ||||||||| | ||||| ||| |||||||| |||||| ||||||||||||| | ||| || ||||  ||| |||| ||    
T  24480766 tggtcaagtagtctagtggctagagctcacataatttaattgtggagaagtggggtgtccaaggttcgaaccccagcccctgcatataatatacaatatc 24480865  T
Q  176 tctactaaatgagctaagctc 196  Q
    ||||| || |||| |||||||    
T  24480866 tctaccaactgagataagctc 24480886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 195
Target Start/End: Original strand, 5328512 - 5328631
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| ||| || |||||| ||||||||||||||||| ||| |||||||||||||||   |||||||||||   ||| || ||||  |||||||| ||    
T  5328512 tggtcaagtagcctagtggctagagctcacacattttaattgtggagaagtgaggtgtccggggttcgaaccccggcccctgcatataatatgcaatatc 5328611  T
Q  176 tctactaaatgagctaagct 195  Q
     |||| || |||||||||||    
T  5328612 cctaccaactgagctaagct 5328631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 31024404 - 31024347
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||||||||||||||||||||||||| |||||||| ||||||   |||||||||||    
T  31024404 gtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccc 31024347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 33810763 - 33810707
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtc 134  Q
    |||||||||  | |||||||||||||||||||||||||||| |||||||| ||||||    
T  33810763 gtcaaatagcttagtggctggagctcacacattttaaatgtggagaagtggggtgtc 33810707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 44053400 - 44053456
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaacc 147  Q
    |||||||||||||||||||||||||||| |||||||| ||||||   ||||||||||    
T  44053400 gtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaacc 44053456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 204
Target Start/End: Complemental strand, 44615805 - 44615678
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| |||| | ||||||| | ||||||||||||||||||  |||| |||||||||   ||||||||| ||||||| || |||| |||||||||||     
T  44615805 tggtcaagtagtttagtggctgaaactcacacattttaaatgtgaagaaatgaggtgtccggggttcgaactctaaccc-tgcatatattatgcaatgtt 44615707  T
Q  176 tctactaaatgagctaagctcatggagac 204  Q
     | |  || ||||||||||||| ||||||    
T  44615706 ccgatcaattgagctaagctcaaggagac 44615678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 91 - 198
Target Start/End: Original strand, 2908052 - 2908158
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagct 190  Q
    |||||| ||||||||||||||||| ||  |||||||| |||||| | |||||||||||   ||| || |||| ||||||| |||| ||||||| | ||||    
T  2908052 gtggctagagctcacacattttaa-tgcggagaagtggggtgtccagggttcgaaccccggcccctgcatatattatgcattgtccctactaactaagct 2908150  T
Q  191 aagctcat 198  Q
    ||||||||    
T  2908151 aagctcat 2908158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 91 - 146
Target Start/End: Complemental strand, 10761929 - 10761874
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaac 146  Q
    |||||| ||||||||||| ||||| ||| ||||||||||||||||| |||||||||    
T  10761929 gtggctagagctcacacaatttaattgtggagaagtgaggtgtctagggttcgaac 10761874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 16449248 - 16449129
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctc 177  Q
    ||||| ||| || |||||| ||||||||||| || || ||| ||||||||  ||||||  ||||||||||| ||||| || ||||  |||||||| || |    
T  16449248 gtcaagtagcctagtggctagagctcacacaattaaattgtggagaagtggagtgtctggggttcgaaccccaacccctgcatataatatgcaatatccc 16449149  T
Q  178 tactaaatgagctaagctca 197  Q
    ||| || |||||||||||||    
T  16449148 taccaactgagctaagctca 16449129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 148
Target Start/End: Original strand, 17499029 - 17499107
Alignment:
Q  70 ttcttgtggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    ||||| ||||||| |||||| |||||| ||||| ||||||||||||||| | |||||| |||||| | |||| ||||||    
T  17499029 ttcttttggtcaagtagtctagtggctagagctgacacattttaaatgtggggaagtggggtgtcaatggtttgaaccc 17499107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 196
Target Start/End: Complemental strand, 34266135 - 34266017
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctc 177  Q
    ||||| ||| || |||||| ||||||||||| ||||| ||| ||||||||  |||||  |||||||||||| ||| | || ||||  |||||||| || |    
T  34266135 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccgaggttcgaaccccaactcctgcatataatatgcaatatccc 34266036  T
Q  178 tactaaatgagctaagctc 196  Q
    ||| || ||||||||||||    
T  34266035 taccaactgagctaagctc 34266017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 169
Target Start/End: Original strand, 43875210 - 43875287
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgc 169  Q
    |||||| |||||| |||||||||||||| |||||||  ||||| || ||||||||||| ||||| ||||||| ||||||    
T  43875210 gtggctagagctcgcacattttaaatgtggagaagtatggtgtttagggttcgaaccccaaccc-tgtatatattatgc 43875287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 8265393 - 8265272
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| ||| || |||||| ||||||||||| || || ||| ||||||||  |||||   |||||||||||| |||| || ||||  |||||||| ||    
T  8265393 tggtcaagtagcctagtggctagagctcacacaattaaattgtggagaagtggagtgtccggggttcgaaccctgacccctgcatataatatgcaatatc 8265294  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||||||||||||    
T  8265293 cctaccaactgagctaagctca 8265272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 11406650 - 11406695
Alignment:
Q  102 tcacacattttaaatgtagagaagtgaggtgtctaaggttcgaacc 147  Q
    ||||||||||||||||| ||||||||||||||| | ||||||||||    
T  11406650 tcacacattttaaatgtggagaagtgaggtgtccagggttcgaacc 11406695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 37708801 - 37708744
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||||||||||||||||||||||||| |||||||| | ||||   |||||||||||    
T  37708801 gtggctggagctcacacattttaaatgtggagaagtgggatgtccggggttcgaaccc 37708744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 38344174 - 38344053
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| |||||| |||||| ||||||||||| ||||| ||| ||||||||  ||||||  ||||||||||| | | | || ||||  |||||||| ||    
T  38344174 tggtcaagtagtctagtggctagagctcacacaatttaattgtggagaagtggagtgtctggggttcgaaccccagctcctgcatataatatgcaatatc 38344075  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||| ||||||||    
T  38344074 cctaccaactgagttaagctca 38344053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 39587672 - 39587551
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| ||| || |||||| ||||||||||| ||||| ||| ||||||||  ||||| | |||||||| ||  |||| || ||||   ||||||| ||    
T  39587672 tggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccagggttcgaatcccgacccctgaatataaaatgcaatatc 39587573  T
Q  176 tctactaaatgagctaagctca 197  Q
    ||||| || |||||||||||||    
T  39587572 tctaccaactgagctaagctca 39587551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 191
Target Start/End: Complemental strand, 41272212 - 41272104
Alignment:
Q  82 aatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctact 181  Q
    ||||| || ||||| ||||||||||||||| |||||| ||||||||  ||||| |  |||||||||| | ||| || |||  |||||||||||| |||||    
T  41272212 aatagcctagtggcgggagctcacacattt-aaatgtggagaagtggtgtgtccagagttcgaaccccagcccctgcataaattatgcaatgtccctact 41272114  T
Q  182 aaatgagcta 191  Q
    || |||||||    
T  41272113 aattgagcta 41272104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 8183429 - 8183373
Alignment:
Q  92 tggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    ||||||||||||||||||||||||| | |||||||| | |||||  |||||||||||    
T  8183429 tggctggagctcacacattttaaatatggagaagtgggttgtctggggttcgaaccc 8183373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 200
Target Start/End: Complemental strand, 12770484 - 12770369
Alignment:
Q  84 tagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaa 183  Q
    |||||| |||||| ||||||||||| || |||||| |||||||| ||||||   |||||||||||   ||| || |||  |||||||||||| |||  ||    
T  12770484 tagtctggtggctagagctcacacaatt-aaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgcaatgtccctatcaa 12770386  T
Q  184 atgagctaagctcatgg 200  Q
     ||||||||||||||||    
T  12770385 ctgagctaagctcatgg 12770369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 175
Target Start/End: Original strand, 14181302 - 14181386
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    |||| ||||||||| ||||||||||||  |||||||||| ||||  ||||||||| || ||||  || |||| ||||||||||||    
T  14181302 gtggttggagctcatacattttaaatgcggagaagtgagatgtcggaggttcgaatcccaacctctgcatatattatgcaatgtc 14181386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 24296831 - 24296934
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagct 190  Q
    |||||| || |||||||| ||||| ||| |||||||| |||||    ||||||||||| ||||| || ||||  |||||||| || ||||||| ||||||    
T  24296831 gtggctagaactcacacaatttaattgtggagaagtggggtgtg---ggttcgaaccccaacccctgcatataatatgcaatatccctactaactgagct 24296927  T
Q  191 aagctca 197  Q
    |||||||    
T  24296928 aagctca 24296934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 26217914 - 26217858
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtc 134  Q
    ||||| |||| | |||| ||||| ||||||||||||||||| |||||||||||||||    
T  26217914 gtcaagtagtttagtggttggagatcacacattttaaatgtggagaagtgaggtgtc 26217858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 148
Target Start/End: Complemental strand, 21133130 - 21133060
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    ||||| ||| || |||||| ||||||||||| ||||| ||| |||||||| |||||||  |||||||||||    
T  21133130 gtcaagtagactagtggctagagctcacacaatttaattgtggagaagtggggtgtctggggttcgaaccc 21133060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 154
Target Start/End: Original strand, 31152980 - 31153042
Alignment:
Q  92 tggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaaccc 154  Q
    ||||| ||||||||||| ||||| ||| |||||||| |||||| | |||||||||||| ||||    
T  31152980 tggctagagctcacacaatttaattgtggagaagtggggtgtccagggttcgaaccctgaccc 31153042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 5038668 - 5038611
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||||||||||||||| ||||| ||| ||||||||  ||||| | |||||||||||    
T  5038668 gtggctggagctcacacaatttaattgtggagaagtggagtgtccagggttcgaaccc 5038611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 146
Target Start/End: Original strand, 9813011 - 9813056
Alignment:
Q  101 ctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaac 146  Q
    |||| ||||||||||||| |||||||||||||||| || |||||||    
T  9813011 ctcatacattttaaatgtggagaagtgaggtgtctgagattcgaac 9813056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 133
Target Start/End: Original strand, 21548442 - 21548499
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgt 133  Q
    ||||||| ||| || |||||| ||||||||||||||||| ||| |||||||| |||||    
T  21548442 tggtcaagtagcctagtggctagagctcacacattttaattgtggagaagtggggtgt 21548499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 192
Target Start/End: Complemental strand, 26467858 - 26467777
Alignment:
Q  111 ttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagctaa 192  Q
    |||||||  |||||||| |||||||||||||| |||||| || | |  |||| |||||||||||| |||| || ||||||||    
T  26467858 ttaaatgcggagaagtggggtgtctaaggttcaaaccctcacacctacatatattatgcaatgtccctaccaattgagctaa 26467777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 34472422 - 34472301
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| |||||| |||| | ||||||||||| ||||| ||| || |||||  ||||||  ||||||||||| ||| | || ||||  |||||||| ||    
T  34472422 tggtcaagtagtctagtggttagagctcacacaatttaattgtggaaaagtggagtgtctggggttcgaaccccaactcctgcatataatatgcaatatc 34472323  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||| ||||||||    
T  34472322 cctaccaactgagttaagctca 34472301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 200
Target Start/End: Complemental strand, 39165020 - 39164979
Alignment:
Q  159 atattttatgcaatgtctctactaaatgagctaagctcatgg 200  Q
    |||| ||||||||||||||||| || ||||||||||||||||    
T  39165020 atatgttatgcaatgtctctaccaactgagctaagctcatgg 39164979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 43656161 - 43656040
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| |||||| |||||| ||||||||||| || || ||| ||||||||   ||||  ||||||||||||  |||| |  ||||  |||||||| ||    
T  43656161 tggtcaagtagtctagtggctagagctcacacaattaaattgtggagaagtggaatgtccgaggttcgaaccccgacccctacatataatatgcaatatc 43656062  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||||||||||||    
T  43656061 cctaccaactgagctaagctca 43656040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 4e-19; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 91 - 196
Target Start/End: Complemental strand, 15939399 - 15939294
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagct 190  Q
    |||||||||||||||||||||||||||| |||||||| |||||    ||||||||||||||||  || |||| ||||||||||||||| | || |||| |    
T  15939399 gtggctggagctcacacattttaaatgtggagaagtggggtgttcggggttcgaaccctaacctctgcatatattatgcaatgtctctgccaattgagtt 15939300  T
Q  191 aagctc 196  Q
    ||||||    
T  15939299 aagctc 15939294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 100 - 197
Target Start/End: Complemental strand, 15765031 - 15764934
Alignment:
Q  100 gctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagctaagctca 197  Q
    |||||| || ||||| ||||||||||||||||||||  | ||||||||| ||||| || ||||  |||||||| || |||| || |||||||||||||    
T  15765031 gctcacgcaatttaattgtagagaagtgaggtgtctgggattcgaaccccaacccctgcatataatatgcaatatccctaccaactgagctaagctca 15764934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 170
Target Start/End: Original strand, 11265054 - 11265157
Alignment:
Q  67 atcttcttgtggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatatttta 166  Q
    ||||| || ||||||||||| || ||||||| ||||||||||||||||| || || ||||||| ||||  |||||| || |  ||||| ||||||| |||    
T  11265054 atctttttttggtcaaatagcctagtggctgaagctcacacattttaaacgtggaaaagtgagatgtccgaggttcaaatcacaacccctgtatatatta 11265153  T
Q  167 tgca 170  Q
    ||||    
T  11265154 tgca 11265157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 13194935 - 13194994
Alignment:
Q  92 tggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaa 151  Q
    ||||| |||||||||||||||| || || |||||||||||||| ||||||||||| ||||    
T  13194935 tggctcgagctcacacattttatatataaagaagtgaggtgtccaaggttcgaactctaa 13194994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 97 - 180
Target Start/End: Complemental strand, 17605531 - 17605448
Alignment:
Q  97 ggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctac 180  Q
    |||| ||||||||||||||||| |||||||||| ||||  ||||| ||||||  |||| | ||||| |||||||||||| ||||    
T  17605531 ggagttcacacattttaaatgttgagaagtgagatgtccgaggtttgaaccccgacccctctatatattatgcaatgtccctac 17605448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 7717552 - 7717622
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||| ||||||| ||||| |||||||||||||||||||||| ||||||||  |||||  | ||||||||||    
T  7717552 gtcagatagtctagtggccggagctcacacattttaaatgtggagaagtggagtgtccgaagttcgaaccc 7717622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 161
Target Start/End: Complemental strand, 11268399 - 11268329
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtata 161  Q
    |||||||||||||||||||||||||| | |||||||  |||||   ||||||||||||| |||| ||||||    
T  11268399 gtggctggagctcacacattttaaatatggagaagtacggtgttcgaggttcgaaccctgacccatgtata 11268329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 204
Target Start/End: Complemental strand, 13528749 - 13528623
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctc 177  Q
    ||||| |||||| |||| | |||||||||||| |||||| |  ||||||||| |||||  |||||||| |  ||||| |  |||| ||||||||||||      
T  13528749 gtcaagtagtctggtggatagagctcacacatattaaatatgcagaagtgagatgtctggggttcgaatctcaacccctacatatattatgcaatgtcat 13528650  T
Q  178 tactaaatgagctaagctcatggagac 204  Q
    | | || ||||||||||||||||||||    
T  13528649 tgccaactgagctaagctcatggagac 13528623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 23984183 - 23984241
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccct 149  Q
    |||||||||| ||||||||||||||||| |||||||| ||||||   ||||||||||||    
T  23984183 gtggctggagttcacacattttaaatgtggagaagtggggtgtccggggttcgaaccct 23984241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 200
Target Start/End: Complemental strand, 28194755 - 28194633
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctc 177  Q
    ||||||||| || |||||| ||||||||||| ||||| ||| |||||||| ||||||   ||||||||| | | ||| || ||||  |||||||| || |    
T  28194755 gtcaaatagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaactccagcccctgcatataatatgcaatatccc 28194656  T
Q  178 tactaaatgagctaagctcatgg 200  Q
    ||  || ||||||||||||||||    
T  28194655 tagcaactgagctaagctcatgg 28194633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 148
Target Start/End: Complemental strand, 32854655 - 32854585
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    ||||| ||| || |||||||||||||||||||||||||||| |||||||  ||||||   |||||||||||    
T  32854655 gtcaagtagcctagtggctggagctcacacattttaaatgtggagaagtagggtgtccggggttcgaaccc 32854585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 35797986 - 35798092
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagct 190  Q
    |||||||||||||||||| ||||| ||||||||||||  || || | | ||||||||| ||||| || ||||  |||||||| ||||||  || |||| |    
T  35797986 gtggctggagctcacacaatttaattgtagagaagtggagtatccaggtttcgaaccccaacccctgcatataatatgcaatatctctaacaactgagtt 35798085  T
Q  191 aagctca 197  Q
    |||||||    
T  35798086 aagctca 35798092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 195
Target Start/End: Complemental strand, 1844940 - 1844823
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctc 177  Q
    ||||| ||| || |||||| ||||||||||| ||||| ||| |||||||| ||||||  ||||||||||||   ||| || ||||  |||||||| || |    
T  1844940 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccgaggttcgaaccccggcccctgcatataatatgcaatatccc 1844841  T
Q  178 tactaaatgagctaagct 195  Q
    ||| || |||||||||||    
T  1844840 taccaactgagctaagct 1844823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 3439073 - 3438952
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    |||||||||||||| |||||| ||||||||||| ||||| ||| ||||||||  |||||   |||||||||||  || | || ||||  |||||||| ||    
T  3439073 tggtcaaatagtctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatc 3438974  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || ||||||| |||||    
T  3438973 cctaccaactgagctacgctca 3438952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 196
Target Start/End: Complemental strand, 3596359 - 3596255
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagct 190  Q
    |||||||||||||||||| || |||||| |||||||| ||||||   |||||||||||  |||| || |||  ||||||||||||||| | || | ||||    
T  3596359 gtggctggagctcacacaatt-aaatgtggagaagtggggtgtccggggttcgaaccccgacccctgcataaattatgcaatgtctctgccaactaagct 3596261  T
Q  191 aagctc 196  Q
    ||||||    
T  3596260 aagctc 3596255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 5947976 - 5947919
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||   |||||||||||    
T  5947976 gtggctggagctcacacattttaaatgtggaggagtggggtgtccggggttcgaaccc 5947919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 200
Target Start/End: Complemental strand, 17524947 - 17524840
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagct 190  Q
    |||||||||||||||||| ||||||||| ||||||| ||| |||| |||||||||| ||  ||  ||||||  |||||||||||| || | || ||||||    
T  17524947 gtggctggagctcacaca-tttaaatgtggagaagt-aggcgtctgaggttcgaactctggcctctgtataaattatgcaatgtccctcccaattgagct 17524850  T
Q  191 aagctcatgg 200  Q
    | ||||||||    
T  17524849 atgctcatgg 17524840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 20497157 - 20497198
Alignment:
Q  93 ggctggagctcacacattttaaatgtagagaagtgaggtgtc 134  Q
    |||||||||||||||||||||||||| |||||||| ||||||    
T  20497157 ggctggagctcacacattttaaatgtggagaagtggggtgtc 20497198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 44186566 - 44186497
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaacc 147  Q
    ||||| |||||| |||||| ||||||||||| ||||| ||| |||||||| ||||||  |||||||||||    
T  44186566 gtcaagtagtctggtggctagagctcacacaatttaattgtggagaagtggggtgtccgaggttcgaacc 44186497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 197
Target Start/End: Original strand, 33228879 - 33228999
Alignment:
Q  77 ggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtct 176  Q
    |||||| ||| || |||||| ||||||||||| ||||| ||| |||||||| ||||||   |||||||||||   ||| || ||||  |||||||| ||     
T  33228879 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatcc 33228978  T
Q  177 ctactaaatgagctaagctca 197  Q
    |||| || |||||||||||||    
T  33228979 ctaccaactgagctaagctca 33228999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 38400439 - 38400367
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    ||||||| ||| || |||||| ||||||||||| ||||| ||| |||||||| |||||| | |||||||||||    
T  38400439 tggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccagggttcgaaccc 38400367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 39635417 - 39635353
Alignment:
Q  84 tagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||| |||||||||| ||||||||||||||||| ||||||||  ||||||   ||||||||||    
T  39635417 tagtctagtggctggagatcacacattttaaatgtggagaagtggagtgtctggagttcgaaccc 39635353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 43896038 - 43895966
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    ||||||| |||||| |||||| ||||||||||| ||||| ||||||||||||  ||||| | ||||| |||||    
T  43896038 tggtcaagtagtctagtggctagagctcacacaatttaattgtagagaagtggagtgtccagggttcaaaccc 43895966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 180
Target Start/End: Original strand, 7000953 - 7001032
Alignment:
Q  101 ctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctac 180  Q
    ||||||||||||| ||||| |||||||  |||| | |||||||||||||||| | || |||| ||||||| |||| ||||    
T  7000953 ctcacacattttacatgtaaagaagtggagtgtttgaggttcgaaccctaactcctgcatatattatgcattgtccctac 7001032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 197
Target Start/End: Original strand, 22653591 - 22653710
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctc 177  Q
    |||||||||||| |||||| ||||||| ||| ||||| ||| ||||||||  |||||   |||||||||||  || | || ||||  |||||||| || |    
T  22653591 gtcaaatagtctagtggctagagctcatacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatccc 22653690  T
Q  178 tactaaatgagctaagctca 197  Q
    ||| || |||||||||||||    
T  22653691 taccaactgagctaagctca 22653710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 146
Target Start/End: Original strand, 39733609 - 39733664
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaac 146  Q
    |||||||||||||||| || |||||||| |||||||| ||||||| || |||||||    
T  39733609 gtggctggagctcacagatattaaatgtggagaagtggggtgtctgagattcgaac 39733664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 127
Target Start/End: Original strand, 10463160 - 10463190
Alignment:
Q  97 ggagctcacacattttaaatgtagagaagtg 127  Q
    |||||||||||||||||||||||||||||||    
T  10463160 ggagctcacacattttaaatgtagagaagtg 10463190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 148
Target Start/End: Complemental strand, 18862375 - 18862305
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    ||||| ||| || |||||| ||||||||||||||||||||| ||||||||  |||||   |||||||||||    
T  18862375 gtcaagtagcctagtggctagagctcacacattttaaatgtggagaagtggagtgtcgggggttcgaaccc 18862305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 197
Target Start/End: Complemental strand, 23405274 - 23405200
Alignment:
Q  123 aagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagctaagctca 197  Q
    ||||| |||||| | |||||||||||  |||| || |||| |||||||||||| |||| || |||||||||||||    
T  23405274 aagtggggtgtccagggttcgaaccccgacccctgcatatattatgcaatgtccctaccaactgagctaagctca 23405200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 23919438 - 23919543
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagct 190  Q
    |||||||||| ||||||| || |||||| ||||| || |||||||  | |||||||||  |||| |  |||| |||||||||||| |||| || ||||||    
T  23919438 gtggctggagttcacacaatt-aaatgtggagaaatggggtgtctgggattcgaaccccgacccctccatatattatgcaatgtccctaccaactgagct 23919536  T
Q  191 aagctca 197  Q
    |||||||    
T  23919537 aagctca 23919543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 28153089 - 28153159
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    ||||| |||||| |||||| ||||||||||| ||||| ||| |||||||| ||||||   |||||||||||    
T  28153089 gtcaagtagtctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccc 28153159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 203
Target Start/End: Original strand, 36112922 - 36113027
Alignment:
Q  98 gagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatatttta-tgcaatgtctctactaaatgagctaagctc 196  Q
    |||||||| |||||||||||| ||||||||| ||||||| ||||||||||  | | | || ||||  || |||||| ||| |||||| |||||||| |||    
T  36112922 gagctcacgcattttaaatgtggagaagtga-gtgtctagggttcgaacctcagctcatgcatataatattgcaatatctttactaattgagctaaactc 36113020  T
Q  197 atggaga 203  Q
    |||||||    
T  36113021 atggaga 36113027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 37486879 - 37486929
Alignment:
Q  77 ggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtg 127  Q
    ||||||||||||| |||||| ||||||||||| ||||| ||| ||||||||    
T  37486879 ggtcaaatagtctagtggctagagctcacacaatttaattgtggagaagtg 37486929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 44033337 - 44033283
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaa 145  Q
    ||||||||||||| |||| ||||||||| ||||| |||||||||  |||||||||    
T  44033337 gtggctggagctcccacactttaaatgtggagaaatgaggtgtccgaggttcgaa 44033283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 134
Target Start/End: Original strand, 44898443 - 44898485
Alignment:
Q  92 tggctggagctcacacattttaaatgtagagaagtgaggtgtc 134  Q
    ||||| ||||||||||||||||||||| |||||||| ||||||    
T  44898443 tggctagagctcacacattttaaatgtggagaagtggggtgtc 44898485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 197
Target Start/End: Original strand, 8250246 - 8250367
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| || ||| |||| | ||||||||||| ||||| ||| |||| |||| ||||||  |||||||||||   ||| || ||||  |||||||| ||    
T  8250246 tggtcaagtattctagtggttagagctcacacaatttaattgtggagaggtgaagtgtctggggttcgaaccccggcccctgcatataatatgcaatatc 8250345  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||||||||||||    
T  8250346 cctaccaactgagctaagctca 8250367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 14518394 - 14518337
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||||||||||||||||||||||| | ||||||||  ||||   ||||||||||||    
T  14518394 gtggctggagctcacacattttaaatatggagaagtggagtgttcgaggttcgaaccc 14518337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 18254699 - 18254642
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||| |||||||||||||||||||||||  ||||||| |||||||   ||||||||||    
T  18254699 gtggttggagctcacacattttaaatgtgaagaagtggggtgtctggagttcgaaccc 18254642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 19684197 - 19684077
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| ||| ||||||||| ||||||||||| ||||| ||| ||||||||  |||||   ||||||||||| | | | || ||||  |||||||| ||    
T  19684197 tggtcaagtagccttgtggctagagctcacacaatttaattgtggagaagtggagtgtc-ggggttcgaaccccagctcctgcatataatatgcaatatc 19684099  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||||||||||||    
T  19684098 cctaccaactgagctaagctca 19684077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 147
Target Start/End: Complemental strand, 25067317 - 25067268
Alignment:
Q  98 gagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaacc 147  Q
    |||||| |||||||||||| | |||||||||||||||| ||||| |||||    
T  25067317 gagctcgcacattttaaatatggagaagtgaggtgtctgaggtttgaacc 25067268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 133
Target Start/End: Complemental strand, 38533649 - 38533616
Alignment:
Q  100 gctcacacattttaaatgtagagaagtgaggtgt 133  Q
    ||||||||||||||||||| ||||||||||||||    
T  38533649 gctcacacattttaaatgttgagaagtgaggtgt 38533616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 133
Target Start/End: Complemental strand, 38534172 - 38534139
Alignment:
Q  100 gctcacacattttaaatgtagagaagtgaggtgt 133  Q
    ||||||||||||||||||| ||||||||||||||    
T  38534172 gctcacacattttaaatgttgagaagtgaggtgt 38534139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 9e-17; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 84 - 200
Target Start/End: Original strand, 47440763 - 47440880
Alignment:
Q  84 tagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgca-atgtctctacta 182  Q
    |||||| ||||||||||||||||||| || ||||| |||||||| |||||| | |||||||||||  |||| || |||| |||||||  |||| |||| |    
T  47440763 tagtctagtggctggagctcacacatatttaatgtggagaagtggggtgtccagggttcgaaccccgacccctgcatatattatgcatttgtccctacca 47440862  T
Q  183 aatgagctaagctcatgg 200  Q
    | ||||||||||||||||    
T  47440863 actgagctaagctcatgg 47440880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 20421726 - 20421828
Alignment:
Q  98 gagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagctaagctca 197  Q
    ||||||||||||||||||||| |||||||||| |||||| |||||||||| || |||  | ||||  |||||||| || ||| ||| ||| ||||||| |    
T  20421726 gagctcacacattttaaatgtggagaagtgagatgtctagggttcgaaccatatcccccgcatataatatgcaatatccctattaactgaactaagctta 20421825  T
Q  198 tgg 200  Q
    |||    
T  20421826 tgg 20421828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 147
Target Start/End: Original strand, 4232550 - 4232619
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaacc 147  Q
    |||||||||||| |||| ||||||||| ||||||||||||| |||||| | ||||||  |||||||||||    
T  4232550 gtcaaatagtctagtggttggagctcatacattttaaatgtggagaagcggggtgtcagaggttcgaacc 4232619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 197
Target Start/End: Original strand, 21402789 - 21402894
Alignment:
Q  92 tggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagcta 191  Q
    ||||| ||||||||||||||||||||| |||||||||||| ||  | |||| ||||| ||||| | |||||  ||| |||| || ||||||| | |||||    
T  21402789 tggctagagctcacacattttaaatgtggagaagtgaggtctccgaagttcaaaccccaacccttatatataatatacaatatccctactaactaagcta 21402888  T
Q  192 agctca 197  Q
    ||||||    
T  21402889 agctca 21402894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 148
Target Start/End: Complemental strand, 32047212 - 32047142
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    ||||||||| || |||||| ||||||||||| ||||| ||| |||||||||||||||   |||||||||||    
T  32047212 gtcaaatagcctagtggctagagctcacacaatttaattgtggagaagtgaggtgtccggggttcgaaccc 32047142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 35835646 - 35835716
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    ||||| ||| || |||||||||||||||||| ||||| ||| ||||||||  |||||| ||||||||||||    
T  35835646 gtcaagtagcctagtggctggagctcacacaatttaattgtggagaagtggagtgtctgaggttcgaaccc 35835716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 203
Target Start/End: Complemental strand, 4960907 - 4960782
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctc 177  Q
    ||||| ||| || |||||| ||||||||||| ||||| ||| ||||||||  |||||   |||||||||||  || | || ||||  |||||||| || |    
T  4960907 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtcaggggttcgaaccccgactcctgcatataatatgcaatatccc 4960808  T
Q  178 tactaaatgagctaagctcatggaga 203  Q
    |||||| ||||||||||||| |||||    
T  4960807 tactaactgagctaagctcaaggaga 4960782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 28799967 - 28800024
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacaca-ttttaaatgtagagaagtgaggtgtc 134  Q
    ||||| |||||| |||| ||||||||||||| ||||||||||||||||||| ||||||    
T  28799967 gtcaagtagtctagtggttggagctcacacatttttaaatgtagagaagtggggtgtc 28800024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 147
Target Start/End: Original strand, 18503448 - 18503496
Alignment:
Q  99 agctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaacc 147  Q
    |||||||||||||||||||| |||||||| |||||||  ||||||||||    
T  18503448 agctcacacattttaaatgtggagaagtggggtgtctggggttcgaacc 18503496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 43119377 - 43119449
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    ||||||| ||| || |||||| ||||||||||| ||||| ||| |||||||| |||||| | |||||||||||    
T  43119377 tggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccagggttcgaaccc 43119449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 5658555 - 5658614
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaacccta 150  Q
    ||||||| |||||||| ||||||||||| |||||||| ||||||| || |||||| ||||    
T  5658555 gtggctgaagctcacatattttaaatgtggagaagtgtggtgtctgagattcgaatccta 5658614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 13702135 - 13702092
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtc 134  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||    
T  13702135 gtggctggagctcacacattttaaatgtggaggagtggggtgtc 13702092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 201
Target Start/End: Original strand, 37240079 - 37240142
Alignment:
Q  138 ggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagctaagctcatgga 201  Q
    ||||| ||||| ||||| ||||||| ||||||||||||| ||| || |||| ||||||||||||    
T  37240079 ggttccaaccccaacccctgtatatattatgcaatgtctttaccaactgagttaagctcatgga 37240142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 134
Target Start/End: Complemental strand, 46758352 - 46758309
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtc 134  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||    
T  46758352 gtggctggagctcacacattttaaatgtggaggagtggggtgtc 46758309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 30388467 - 30388573
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagct 190  Q
    |||||| ||||||||||| ||||| ||| ||||||||  ||||||  |||||||||||   ||| || ||||  |||||||| || |||| || ||||||    
T  30388467 gtggctagagctcacacaatttaattgtggagaagtggagtgtctggggttcgaaccccggcccctgcatataatatgcaatatccctaccaactgagct 30388566  T
Q  191 aagctca 197  Q
    |||||||    
T  30388567 aagctca 30388573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 133
Target Start/End: Original strand, 10363373 - 10363421
Alignment:
Q  84 tagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgt 133  Q
    |||||| ||| |||||||||||||| ||||||||| ||||||||||||||    
T  10363373 tagtctagtgactggagctcacaca-tttaaatgtggagaagtgaggtgt 10363421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 11692515 - 11692458
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgt 133  Q
    ||||||| |||||| ||||   |||||| ||||||||||||||||||||||| |||||    
T  11692515 tggtcaagtagtctagtggtcagagctcgcacattttaaatgtagagaagtggggtgt 11692458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 15021165 - 15021277
Alignment:
Q  84 tagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaa 183  Q
    |||||| |||||| ||||||||||| ||||||||| || || |||||||||   |||||||||||  || | ||||||  ||||||||| || |||| ||    
T  15021165 tagtctagtggctagagctcacaca-tttaaatgtggaaaaatgaggtgtccggggttcgaaccccgactcctgtataaattatgcaatctccctaccaa 15021263  T
Q  184 atgagctaagctca 197  Q
     |||| ||||||||    
T  15021264 ttgagttaagctca 15021277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 196
Target Start/End: Complemental strand, 22548320 - 22548216
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagct 190  Q
    ||||||||||||||| || || |||||| |||||||| |||||    |||||||||||| |||| ||||||  ||||||||||||  ||| || ||||||    
T  22548320 gtggctggagctcacgcaatt-aaatgtggagaagtggggtgttcggggttcgaaccctgacccctgtataaattatgcaatgtccttaccaactgagct 22548222  T
Q  191 aagctc 196  Q
    | ||||    
T  22548221 atgctc 22548216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 27788378 - 27788322
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||||||||||| |||||| |||||| |||||||| |||||||  |||||||||||    
T  27788378 gtggctggagctcatacattt-aaatgtggagaagtggggtgtctggggttcgaaccc 27788322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 27791534 - 27791478
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||||||||||| |||||| |||||| |||||||| |||||||  |||||||||||    
T  27791534 gtggctggagctcatacattt-aaatgtggagaagtggggtgtctggggttcgaaccc 27791478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 33590565 - 33590516
Alignment:
Q  84 tagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgt 133  Q
    |||||| ||||||||||||| ||||||||||||||  ||||||| |||||    
T  33590565 tagtctggtggctggagctcgcacattttaaatgtgtagaagtggggtgt 33590516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 35950253 - 35950132
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| ||| || |||||| ||||||||||| ||||| ||| ||||||||  |||||   |||||||||||  || | || ||||  |||||||| ||    
T  35950253 tggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatc 35950154  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||||||||||||    
T  35950153 cctaccaactgagctaagctca 35950132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 37710190 - 37710157
Alignment:
Q  96 tggagctcacacattttaaatgtagagaagtgag 129  Q
    ||||||||||||||||||||||| ||||||||||    
T  37710190 tggagctcacacattttaaatgtggagaagtgag 37710157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 38151460 - 38151348
Alignment:
Q  84 tagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaa 183  Q
    |||||| |||||| ||||||||||| || |||||| |||||||| |||||  | |||||||||||  |||| || |||  | ||||||| || |||| ||    
T  38151460 tagtctagtggctagagctcacacaatt-aaatgtggagaagtggggtgttcatggttcgaaccccgacccctgcataaataatgcaatatccctaccaa 38151362  T
Q  184 atgagctaagctca 197  Q
     |||||||||||||    
T  38151361 ctgagctaagctca 38151348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 43404941 - 43404990
Alignment:
Q  98 gagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaacc 147  Q
    ||||||||||||||||||||| |||||||||| ||| |  ||||||||||    
T  43404941 gagctcacacattttaaatgtggagaagtgagatgtttggggttcgaacc 43404990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 197
Target Start/End: Original strand, 45284765 - 45284885
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||| |||||||| |||| | ||||||||||| || |||||| |||||||| ||||||   |||||||||||  |||| || |||  |||| |||||||    
T  45284765 tggtctaatagtctagtggttagagctcacacaatt-aaatgttgagaagtggggtgtccggggttcgaaccccgacccctgcataaattattcaatgtc 45284863  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||  || |||||||||||||    
T  45284864 cctatcaactgagctaagctca 45284885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 46645815 - 46645762
Alignment:
Q  95 ctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||||||||||||||||||||| ||| |||| ||||||   |||||||||||    
T  46645815 ctggagctcacacattttaaatgtggaggagtggggtgtccggggttcgaaccc 46645762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 4e-16; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 32141981 - 32142053
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||| ||||||| |||||||||||||||||||||||||||| || ||||| |||||||  |||||||||||    
T  32141981 tggtcagatagtctagtggctggagctcacacattttaaatgtggaaaagtggggtgtctggggttcgaaccc 32142053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 204
Target Start/End: Complemental strand, 3709969 - 3709855
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgca-atgtctctactaaatgagc 189  Q
    ||||||||||||| |||||||||||||| |||||||| |||||||  ||||||||||| | ||| || ||||  ||||||  ||||||||| || ||||     
T  3709969 gtggctggagctctcacattttaaatgtggagaagtggggtgtctggggttcgaaccccaccccttgcatataatatgcatttgtctctacaaactgagt 3709870  T
Q  190 taagctcatggagac 204  Q
    |||||||| ||||||    
T  3709869 taagctcacggagac 3709855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 20846145 - 20846067
Alignment:
Q  102 tcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctac 180  Q
    |||||||||||||||||||||||||| ||||| || ||||||||||| ||||  || |||| ||||||| |||||||||    
T  20846145 tcacacattttaaatgtagagaagtgtggtgtatagggttcgaaccccaaccactgcatatattatgcattgtctctac 20846067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 18904382 - 18904318
Alignment:
Q  84 tagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||| |||||||||||||||||||||||||||| |||||||| ||||||   |||||||||||    
T  18904382 tagtctagtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccc 18904318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 134
Target Start/End: Complemental strand, 32616509 - 32616451
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtc 134  Q
    |||||| |||| || ||||||||||||||||||||||||||| ||||||||| ||||||    
T  32616509 tggtcagatagcctagtggctggagctcacacattttaaatgcagagaagtggggtgtc 32616451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 145
Target Start/End: Original strand, 31803540 - 31803609
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaa 145  Q
    ||||||| |||||| |||||| ||||||||||| ||||| ||| ||||||||||||||| | ||||||||    
T  31803540 tggtcaagtagtctagtggctagagctcacacaatttaattgtggagaagtgaggtgtccagggttcgaa 31803609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 32621542 - 32621599
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||||||||||||||||||||||||| |||||||| |||||||  | |||||||||    
T  32621542 gtggctggagctcacacattttaaatgtggagaagtggggtgtctgggattcgaaccc 32621599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 7545452 - 7545333
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctc 177  Q
    ||||| |||||| |||||| ||||||||||| ||||| ||| |||||||| |||||    ||||||||||||  ||| || ||||  |||||||| || |    
T  7545452 gtcaagtagtctagtggctagagctcacacaatttaattgtggagaagtggggtgttcggggttcgaaccctggcccctgcatataatatgcaatatccc 7545353  T
Q  178 tactaaatgagctaagctca 197  Q
    ||| || |||||||||||||    
T  7545352 taccaactgagctaagctca 7545333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 1368150 - 1368191
Alignment:
Q  94 gctggagctcacacattttaaatgtagagaagtgaggtgtct 135  Q
    ||||||||||||||||||||||||| |||||||| |||||||    
T  1368150 gctggagctcacacattttaaatgtggagaagtggggtgtct 1368191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 3640639 - 3640518
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| |||||| |||||| ||||||||||| || || ||| ||||||||  |||||  ||||||||||||   ||| || ||||  |||||||| ||    
T  3640639 tggtcaagtagtctagtggctagagctcacacaattaaattgtggagaagtggagtgtccgaggttcgaaccccggcccttgcatatactatgcaatatc 3640540  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||||||||||||    
T  3640539 cctaccaactgagctaagctca 3640518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 16406693 - 16406573
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| |||| | ||||||||| |||||||| ||||||| ||||||||| ||||||||  ||||| ||||| | ||| || |||  |||| |||| ||    
T  16406693 tggtcaagtagtttagtggctggaactcacaca-tttaaatatagagaagtaaggtgtctggggttcaaaccccagcccctgcataaattatacaatatc 16406595  T
Q  176 tctactaaatgagctaagctca 197  Q
    ||||| || ||| |||||||||    
T  16406594 tctaccaattgaactaagctca 16406573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 28021342 - 28021286
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||||||||||||||||| ||||||| |||||||| |||||| | |||||||||||    
T  28021342 gtggctggagctcacacattataaatgtggagaagtggggtgtc-agggttcgaaccc 28021286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 24129419 - 24129363
Alignment:
Q  92 tggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||| |||||||||||||| ||||| |||||||| | |||| |||||||||||||    
T  24129419 tggctgaagctcacacatttttaatgtggagaagtgggatgtccaaggttcgaaccc 24129363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 33646960 - 33646888
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    ||||||| ||| || |||||| ||||||||||| ||||| ||| |||||||| ||||||  ||||||||||||    
T  33646960 tggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccgaggttcgaaccc 33646888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 192
Target Start/End: Original strand, 3795720 - 3795835
Alignment:
Q  77 ggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtct 176  Q
    |||||| ||| || |||||| ||||||||||| || || ||| ||||||||  |||||| |||||||||||| | ||| || ||||  |||||||| ||     
T  3795720 ggtcaagtagcctagtggctagagctcacacaattaaattgtggagaagtggagtgtctgaggttcgaaccccagcccctgcatataatatgcaatatcc 3795819  T
Q  177 ctactaaatgagctaa 192  Q
    |||| || ||||||||    
T  3795820 ctaccaactgagctaa 3795835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 142
Target Start/End: Original strand, 29646719 - 29646762
Alignment:
Q  99 agctcacacattttaaatgtagagaagtgaggtgtctaaggttc 142  Q
    ||||||||||||||||||||||||||||||| |||  |||||||    
T  29646719 agctcacacattttaaatgtagagaagtgagatgtacaaggttc 29646762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 2251964 - 2251842
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacatttt-aaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgt 174  Q
    ||||||| ||| || |||||  ||||||||||||||| |||||| |||||||| ||||||   |||||||||||   ||| || ||||  |||||||| |    
T  2251964 tggtcaagtagcctagtggccagagctcacacatttttaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcatatagtatgcaatat 2251865  T
Q  175 ctctactaaatgagctaagctca 197  Q
    | |||| || |||||||||||||    
T  2251864 ccctaccaactgagctaagctca 2251842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 197
Target Start/End: Complemental strand, 32283628 - 32283542
Alignment:
Q  111 ttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagctaagctca 197  Q
    |||||||| || |||||| ||||||  |||||||||||  |||| || |||  |||||||||||| |||| || |||||||||||||    
T  32283628 ttaaatgtggaaaagtgaagtgtctggggttcgaaccccgacccttgcataaattatgcaatgtccctaccaattgagctaagctca 32283542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 126
Target Start/End: Original strand, 6329819 - 6329856
Alignment:
Q  89 ttgtggctggagctcacacattttaaatgtagagaagt 126  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  6329819 ttgtggctagagctcacacattttaaatgtggagaagt 6329856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 7177420 - 7177299
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| ||| || |||||| ||||||||||  ||||| ||| |||||||| |||||||  ||||||||||| | ||| || ||||   || |||| ||    
T  7177420 tggtcaagtagcctagtggctagagctcacactgtttaattgtggagaagtggggtgtctggggttcgaaccccagcccctgcatataaaatacaatatc 7177321  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||||||||||||    
T  7177320 cctaccaactgagctaagctca 7177299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 9435751 - 9435630
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||||||| ||  ||||| ||||||||||| || || ||| ||||||||  |||||   ||||||||||| | ||| || ||||  |||||||| ||    
T  9435751 tggtcaaatagcctaatggctagagctcacacaattaaattgtggagaagtggagtgtccggggttcgaaccccagcccctgcatataatatgcaatatc 9435652  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||||||||||||    
T  9435651 cctaccaactgagctaagctca 9435630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 203
Target Start/End: Complemental strand, 22997459 - 22997334
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctc 177  Q
    ||||| |||||| |||||| ||||||||||| ||||| ||| |||||||  ||||||   |||||||||||  |||| |  ||||  ||| |||| || |    
T  22997459 gtcaagtagtctagtggctagagctcacacaatttaattgtggagaagtagggtgtccggggttcgaaccccgacccctacatataatattcaatatccc 22997360  T
Q  178 tactaaatgagctaagctcatggaga 203  Q
    ||| || ||||||||||||| |||||    
T  22997359 taccaactgagctaagctcacggaga 22997334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 203
Target Start/End: Original strand, 23790942 - 23791067
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctc 177  Q
    ||||| |||||| |||||| ||||||||||| ||||| ||| |||||||  ||||||   |||||||||||  |||| |  ||||  ||| |||| || |    
T  23790942 gtcaagtagtctagtggctagagctcacacaatttaattgtggagaagtagggtgtccggggttcgaaccccgacccctacatataatattcaatatccc 23791041  T
Q  178 tactaaatgagctaagctcatggaga 203  Q
    ||| || ||||||||||||| |||||    
T  23791042 taccaactgagctaagctcacggaga 23791067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 24784319 - 24784262
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgt 133  Q
    ||||||| |||||| |||||| ||||||||||| ||||| |||| |||||||| ||||    
T  24784319 tggtcaattagtctggtggctagagctcacacaatttaattgtaaagaagtgaagtgt 24784262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 197
Target Start/End: Original strand, 30885515 - 30885636
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| ||| || |||||| ||| ||||||| || || ||| ||||| ||  ||||||  ||||||||||| | ||| |||||||  |||||||| ||    
T  30885515 tggtcaagtagcctagtggctagagttcacacaattaaattgtggagaaatggagtgtctggggttcgaaccccagcccctgtatataatatgcaatatc 30885614  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||||||||||||    
T  30885615 cctaccaactgagctaagctca 30885636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 18512528 - 18512592
Alignment:
Q  84 tagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||| |||||||||||||||||||||||||||| |||||||| ||||||   |||||||||||    
T  18512528 tagtctagtggctggagctcacacattttaaatgtggagaagtggggtgtccggggttcgaaccc 18512592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 50103984 - 50103864
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgca-atgtct 176  Q
    ||||| ||| || |||||| ||| | ||||||||||||||| ||||||||||||||| | |||||||||||| |||| |  |||| |||||||  |||||    
T  50103984 gtcaagtagcctagtggctagagttgacacattttaaatgtggagaagtgaggtgtccagggttcgaaccctgacccctacatatattatgcatttgtct 50103885  T
Q  177 ctactaaatgagctaagctca 197  Q
    |||| || ||| |||||||||    
T  50103884 ctacaaactgatctaagctca 50103864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 197
Target Start/End: Original strand, 37662504 - 37662623
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctc 177  Q
    ||||| |||||| |||| ||||||||||||| ||||| |||||||||||| ||||||   |||||| ||||  |||| || ||||  |||||||| || |    
T  37662504 gtcaagtagtctagtggttggagctcacacaatttaactgtagagaagtggggtgtccggggttcgtaccccgacccctgcatataatatgcaatatccc 37662603  T
Q  178 tactaaatgagctaagctca 197  Q
    ||| || |||||||||||||    
T  37662604 taccaactgagctaagctca 37662623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 5430999 - 5431056
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||||||||||||||||||||||||| || ||||| |||||| || ||||||||||    
T  5430999 gtggctggagctcacacattttaaatgtggataagtggggtgtccaaagttcgaaccc 5431056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 195
Target Start/End: Original strand, 28564292 - 28564409
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctc 177  Q
    ||||| ||| || |||||| ||||||||||| ||||| ||| |||||||| ||||||  |||||||||||| ||||| || ||||  | |||||| || |    
T  28564292 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccgaggttcgaaccccaacccctgcatataatctgcaatatccc 28564391  T
Q  178 tactaaatgagctaagct 195  Q
    |||||| |||| ||||||    
T  28564392 tactaactgagttaagct 28564409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 48638657 - 48638536
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| ||| || |||||| ||||||||||| ||||| ||| |||||||| |||||||  ||||||||||| | ||| || ||||   ||||||| ||    
T  48638657 tggtcaagtagcctagtggctagagctcacacagtttaattgtggagaagtggggtgtctggggttcgaaccccagcccctgcatataaaatgcaatatc 48638558  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||||||||||||    
T  48638557 cctaccaactgagctaagctca 48638536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 33033251 - 33033179
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    ||||||| |||||| |||| | ||||||||||||||||| ||| ||||| || |||||||| |||||||||||    
T  33033251 tggtcaagtagtctagtggttagagctcacacattttaattgtggagaaatggggtgtctagggttcgaaccc 33033179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 148
Target Start/End: Complemental strand, 41998453 - 41998401
Alignment:
Q  96 tggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    ||||||||||||||||||||||| |||||||  |||||||| |||||||||||    
T  41998453 tggagctcacacattttaaatgtggagaagtagggtgtctagggttcgaaccc 41998401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 76 - 203
Target Start/End: Complemental strand, 7191157 - 7191030
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| ||| || |||||| ||||||||||| ||||| ||| |||||||||||||||   ||||||||||| | ||| || ||||  |||||||| ||    
T  7191157 tggtcaagtaggctagtggctagagctcacacaatttaattgtggagaagtgaggtgtccggggttcgaaccccagcccctgcatataatatgcaatatc 7191058  T
Q  176 tctactaaatgagctaagctcatggaga 203  Q
     |||  || ||||||||| ||| |||||    
T  7191057 cctatcaactgagctaaggtcacggaga 7191030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 18911961 - 18911898
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaaccc 154  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||   |||||||||||| ||||    
T  18911961 gtggctggagctcacacattttaaatgtggaggagtggggtgtccggggttcgaaccctgaccc 18911898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 91 - 146
Target Start/End: Original strand, 27579434 - 27579489
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaac 146  Q
    |||||| ||||||||||||||||||||| ||||| || |||||||| |||||||||    
T  27579434 gtggctagagctcacacattttaaatgtggagaaatggggtgtctagggttcgaac 27579489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 98 - 197
Target Start/End: Original strand, 35605590 - 35605689
Alignment:
Q  98 gagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagctaagctca 197  Q
    ||||||||||| ||||| ||| |||||||| ||||| || |||||||||||  |||| || ||||  |||||||| || |||| || |||||||||||||    
T  35605590 gagctcacacaatttaattgtggagaagtggggtgtttagggttcgaaccccgacccctgcatataatatgcaatatccctaccaactgagctaagctca 35605689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 104 - 147
Target Start/End: Complemental strand, 45518422 - 45518379
Alignment:
Q  104 acacattttaaatgtagagaagtgaggtgtctaaggttcgaacc 147  Q
    |||||||||||||||||||||||||||||| | |||||||||||    
T  45518422 acacattttaaatgtagagaagtgaggtgtatgaggttcgaacc 45518379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 12613282 - 12613244
Alignment:
Q  96 tggagctcacacattttaaatgtagagaagtgaggtgtc 134  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  12613282 tggagctcacacattttaaatgtagagaagtggggtgtc 12613244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 133
Target Start/End: Original strand, 27094297 - 27094331
Alignment:
Q  99 agctcacacattttaaatgtagagaagtgaggtgt 133  Q
    |||||||||||||||||||||||||||||||||||    
T  27094297 agctcacacattttaaatgtagagaagtgaggtgt 27094331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 42735986 - 42735948
Alignment:
Q  96 tggagctcacacattttaaatgtagagaagtgaggtgtc 134  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  42735986 tggagctcacacattttaaatgtagagaagtggggtgtc 42735948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 45180469 - 45180538
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||||||  | |||||||||||||||||||| |||||||||||||||| | |||| | |||||||||||    
T  45180469 gtcaaatagattagtggctggagctcacacattataaatgtagagaagtgggttgtc-agggttcgaaccc 45180538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 13763871 - 13763814
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    ||||||| ||||||||||||||||||||||||||||| ||| ||   |||||||||||    
T  13763871 gtggctgaagctcacacattttaaatgtagagaagtggggtatccggggttcgaaccc 13763814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 21265781 - 21265660
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| ||| || |||||| ||||||||||| ||||| ||| |||||||| ||||||   |||||||||||   ||| || ||||  |||||||| ||    
T  21265781 tggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatc 21265682  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||||||||||||    
T  21265681 cctaccaactgagctaagctca 21265660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 197
Target Start/End: Complemental strand, 8741596 - 8741477
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctc 177  Q
    ||||| ||| || |||| ||||||||||||||| ||||||| |||||||| ||||||   |||||||||||   ||| || |||  ||||| |||||| |    
T  8741596 gtcaagtagcctagtggttggagctcacacattataaatgtggagaagtggggtgtcaggggttcgaacccctgcccctgcataaattatgtaatgtccc 8741497  T
Q  178 tactaaatgagctaagctca 197  Q
    ||| || ||| |||||||||    
T  8741496 taccaactgaactaagctca 8741477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 146
Target Start/End: Complemental strand, 11344548 - 11344493
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaac 146  Q
    ||||||| ||||||||||| || ||||| ||||||||||||||| | |||||||||    
T  11344548 gtggctgaagctcacacatatttaatgtggagaagtgaggtgtccagggttcgaac 11344493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 146
Target Start/End: Complemental strand, 11502568 - 11502513
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaac 146  Q
    ||||||| ||||||||||| || ||||| ||||||||||||||| | |||||||||    
T  11502568 gtggctgaagctcacacatatttaatgtggagaagtgaggtgtccagggttcgaac 11502513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 193
Target Start/End: Complemental strand, 50533190 - 50533076
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctc 177  Q
    |||||||||| | |||| |||| |||||||||||||||||| || ||||| || |||  ||| |||||| |  |||| || |||| ||||||||||| ||    
T  50533190 gtcaaatagtttagtgggtggaactcacacattttaaatgtggataagtggggcgtc-cagggtcgaactccgacccctgcatatattatgcaatgtttc 50533092  T
Q  178 tactaaatgagctaag 193  Q
    ||| || |||||||||    
T  50533091 taccaactgagctaag 50533076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 148
Target Start/End: Original strand, 1604191 - 1604241
Alignment:
Q  98 gagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    ||||||||||||||||||||| ||||| || |||||| | |||||||||||    
T  1604191 gagctcacacattttaaatgtggagaattgtggtgtcaagggttcgaaccc 1604241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 197
Target Start/End: Complemental strand, 24875080 - 24874975
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagct 190  Q
    |||||||||||||||||| || |||| | |||||||| ||||||  ||||||||||||   ||| || |||  ||||||||| || |||| || ||||||    
T  24875080 gtggctggagctcacacaatt-aaatatggagaagtggggtgtccgaggttcgaacccctgcccatgcataaattatgcaatatccctaccaactgagct 24874982  T
Q  191 aagctca 197  Q
    |||||||    
T  24874981 aagctca 24874975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 148
Target Start/End: Original strand, 34557275 - 34557340
Alignment:
Q  82 aatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    |||||||| |||||| ||||||||||| ||||||||| |||||||  |||||| ||| |||||||||    
T  34557275 aatagtctagtggctagagctcacaca-tttaaatgtggagaagtagggtgtccaagattcgaaccc 34557340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 34656355 - 34656461
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagct 190  Q
    |||||| ||||||||||| ||||| ||| ||||||||  |||||  |||||||||||| ||||| || ||||   ||||||| ||||||  || ||||||    
T  34656355 gtggctagagctcacacaatttaattgtggagaagtggagtgtccgaggttcgaaccccaacccctgcatataaaatgcaatatctctatcaactgagct 34656454  T
Q  191 aagctca 197  Q
    || ||||    
T  34656455 aaactca 34656461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 141
Target Start/End: Complemental strand, 34824290 - 34824228
Alignment:
Q  79 tcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggtt 141  Q
    ||||||| |||  ||||||||||||| |||| ||||||||  ||||||||||||| |||||||    
T  34824290 tcaaatactctaatggctggagctcatacatattaaatgtgaagaagtgaggtgtataaggtt 34824228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 204
Target Start/End: Original strand, 43021570 - 43021695
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctc 177  Q
    |||||||||||| ||||||  |||||||||  || |||||| |||||||| ||||||  ||||||||||||  |||| || |||   |||||| |||| |    
T  43021570 gtcaaatagtctagtggctacagctcacacgatt-aaatgtggagaagtggggtgtccgaggttcgaaccccgacccctgcataaaatatgcattgtccc 43021668  T
Q  178 tactaaatgagctaagctcatggagac 204  Q
    ||| || | ||||||||||| ||||||    
T  43021669 taccaactaagctaagctcacggagac 43021695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 197
Target Start/End: Original strand, 7166172 - 7166293
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| ||| || |||||| ||||||||||| || || ||| ||||||||  |||||   ||||||||||| | ||| || ||||  |||||||| ||    
T  7166172 tggtcaagtagcctagtggctagagctcacacaattaaattgtggagaagtggagtgtccggggttcgaaccccagcccctgcatataatatgcaatatc 7166271  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||||||||||||    
T  7166272 cctaccaactgagctaagctca 7166293  T

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Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 197
Target Start/End: Complemental strand, 11860158 - 11860046
Alignment:
Q  84 tagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaa 183  Q
    |||||| ||||| ||| |||||||| || |||||| |||||||| ||||||   |||||||||||  |||| | ||||  ||||||||||| ||| | ||    
T  11860158 tagtctagtggccggacctcacacaatt-aaatgtggagaagtggggtgtccggggttcgaaccccgacccctatataaattatgcaatgtttctgccaa 11860060  T
Q  184 atgagctaagctca 197  Q
     |||||||||||||    
T  11860059 ctgagctaagctca 11860046  T

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Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 203
Target Start/End: Complemental strand, 19011478 - 19011353
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctc 177  Q
    ||||| ||| || |||||| ||||||||||| || || ||| ||||||||  || |||  ||||||||||| | ||| || ||||  |||||||| || |    
T  19011478 gtcaagtagcctagtggctagagctcacacaattaaattgtggagaagtggagtatctggggttcgaaccccagcccctgcatataatatgcaatatccc 19011379  T
Q  178 tactaaatgagctaagctcatggaga 203  Q
    ||| || ||||||||||||| |||||    
T  19011378 taccaattgagctaagctcacggaga 19011353  T

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Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 25999975 - 25999854
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| || ||| |||||| ||||||||||| ||||| ||| ||||||||  |||||   ||||||||||| | | | || ||||  |||||||| ||    
T  25999975 tggtcaagtaatctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccagctcctgcatataatatgcaatatc 25999876  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||||||||||||    
T  25999875 cctaccaactgagctaagctca 25999854  T

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Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 26909831 - 26909887
Alignment:
Q  91 gtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccc 148  Q
    ||||||| ||||||||||||| |||||| |||||||| |||||| | |||||||||||    
T  26909831 gtggctgaagctcacacattt-aaatgtggagaagtggggtgtccagggttcgaaccc 26909887  T

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Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 32594376 - 32594255
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| ||| || |||||| ||||||||||| ||||| ||| ||||||||  |||||   |||||||||||  || | || ||||  |||||||| ||    
T  32594376 tggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccgactcctgcatataatatgcaatatc 32594277  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||||||||||||    
T  32594276 cctaccaactgagctaagctca 32594255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 135
Target Start/End: Complemental strand, 38205036 - 38204979
Alignment:
Q  78 gtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtct 135  Q
    ||||| |||||| | ||||| |||||||||||||||||| |||| |||||| ||||||    
T  38205036 gtcaagtagtctagcggctgaagctcacacattttaaatatagaaaagtgaagtgtct 38204979  T

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Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 136
Target Start/End: Original strand, 41972692 - 41972729
Alignment:
Q  99 agctcacacattttaaatgtagagaagtgaggtgtcta 136  Q
    |||||||||||||||||| | |||||||||||||||||    
T  41972692 agctcacacattttaaatatggagaagtgaggtgtcta 41972729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 44732758 - 44732637
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| |||||| |||||| ||| ||||||| ||||| ||| |||||||| ||||||   |||||||||||   ||| || ||||  |||||||| ||    
T  44732758 tggtcaagtagtctagtggctagagttcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccttgcatataatatgcaatatc 44732659  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||| ||||||||    
T  44732658 cctaccaactgagttaagctca 44732637  T

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Target: scaffold0088 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 197
Target Start/End: Original strand, 10771 - 10892
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| ||| || |||||| ||||||||||| ||||| ||| |||||||| ||||||   |||||||||||   ||| || ||||  |||||||| ||    
T  10771 tggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcatataatatgcaatatc 10870  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||||||||||||    
T  10871 cctaccaactgagctaagctca 10892  T

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Target: scaffold0250 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 197
Target Start/End: Complemental strand, 15095 - 15009
Alignment:
Q  111 ttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtctctactaaatgagctaagctca 197  Q
    |||||||| |||||||| ||||| |  |||||||||| | |||| || |||  |||||||||||| |||| || |||||||||||||    
T  15095 ttaaatgtggagaagtggggtgtttggggttcgaaccatgacccctgcataaattatgcaatgtccctaccaactgagctaagctca 15009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 197
Target Start/End: Original strand, 3959 - 4080
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| ||| || |||||| ||||||||||| || || ||| ||||||||  ||||||  |||||||||||  || | || ||||  |||||||| ||    
T  3959 tggtcaagtagcctagtggctagagctcacacaattaaattgtggagaagtggagtgtctggggttcgaaccccgactcctgcatataatatgcaatatc 4058  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||||||||||||    
T  4059 cctaccaactgagctaagctca 4080  T

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Target: scaffold0141 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 134
Target Start/End: Complemental strand, 39902 - 39869
Alignment:
Q  101 ctcacacattttaaatgtagagaagtgaggtgtc 134  Q
    |||||||||||||||||||||| |||||||||||    
T  39902 ctcacacattttaaatgtagaggagtgaggtgtc 39869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 197
Target Start/End: Complemental strand, 17745 - 17624
Alignment:
Q  76 tggtcaaatagtcttgtggctggagctcacacattttaaatgtagagaagtgaggtgtctaaggttcgaaccctaacccgtgtatattttatgcaatgtc 175  Q
    ||||||| ||| || |||||| ||||||||||| ||||| ||| ||||||||  |||||   ||||||||||| | | | || ||||  |||||||| ||    
T  17745 tggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaaccccagctcctgcatataatatgcaatatc 17646  T
Q  176 tctactaaatgagctaagctca 197  Q
     |||| || |||||||||||||    
T  17645 cctaccaactgagctaagctca 17624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 134
Target Start/End: Original strand, 74910 - 74943
Alignment:
Q  101 ctcacacattttaaatgtagagaagtgaggtgtc 134  Q
    |||||||||||||||||||||| |||||||||||    
T  74910 ctcacacattttaaatgtagaggagtgaggtgtc 74943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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