View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8941_low_54 (Length: 258)

Name: NF8941_low_54
Description: NF8941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8941_low_54
NF8941_low_54
[»] chr8 (27 HSPs)
chr8 (14-258)||(28984305-28984549)
chr8 (14-258)||(16268367-16268611)
chr8 (17-258)||(31413678-31413919)
chr8 (14-258)||(29300569-29300813)
chr8 (14-258)||(22027423-22027667)
chr8 (53-258)||(21928822-21929027)
chr8 (17-258)||(22054257-22054498)
chr8 (53-258)||(19985574-19985779)
chr8 (26-258)||(20391480-20391712)
chr8 (17-192)||(21671975-21672150)
chr8 (53-243)||(22990454-22990644)
chr8 (24-215)||(22710423-22710614)
chr8 (52-221)||(3274537-3274705)
chr8 (14-177)||(18860049-18860212)
chr8 (121-196)||(19481325-19481400)
chr8 (143-243)||(22523919-22524019)
chr8 (62-229)||(22126153-22126320)
chr8 (14-112)||(21970694-21970792)
chr8 (14-192)||(32603605-32603783)
chr8 (15-112)||(22004225-22004322)
chr8 (38-231)||(22043248-22043441)
chr8 (74-243)||(22421096-22421265)
chr8 (98-258)||(22374263-22374423)
chr8 (62-177)||(19115872-19115987)
chr8 (14-177)||(20015409-20015572)
chr8 (62-180)||(17671216-17671334)
chr8 (134-248)||(30310407-30310521)
[»] chr3 (59 HSPs)
chr3 (14-258)||(47126901-47127145)
chr3 (14-258)||(28757276-28757520)
chr3 (14-258)||(10408925-10409169)
chr3 (20-258)||(16326641-16326881)
chr3 (17-258)||(11958112-11958353)
chr3 (14-258)||(12357455-12357699)
chr3 (14-258)||(16384300-16384544)
chr3 (77-258)||(17189331-17189512)
chr3 (14-258)||(16831456-16831700)
chr3 (14-258)||(18131275-18131519)
chr3 (14-258)||(31692113-31692357)
chr3 (14-258)||(31941860-31942104)
chr3 (77-258)||(24190261-24190441)
chr3 (17-232)||(14290463-14290678)
chr3 (17-258)||(16825210-16825451)
chr3 (53-232)||(35983164-35983343)
chr3 (17-230)||(17494631-17494848)
chr3 (80-232)||(12181327-12181479)
chr3 (14-258)||(2036840-2037084)
chr3 (14-258)||(2040581-2040825)
chr3 (14-258)||(14039703-14039947)
chr3 (15-258)||(13944981-13945224)
chr3 (27-258)||(15230560-15230791)
chr3 (27-258)||(15236428-15236659)
chr3 (20-196)||(23078962-23079138)
chr3 (92-258)||(8744396-8744562)
chr3 (17-215)||(12508496-12508694)
chr3 (14-180)||(5421872-5422038)
chr3 (14-180)||(6597077-6597243)
chr3 (155-258)||(13317638-13317741)
chr3 (14-229)||(15712998-15713213)
chr3 (14-180)||(16753643-16753809)
chr3 (14-180)||(6603757-6603923)
chr3 (77-258)||(12857487-12857668)
chr3 (14-177)||(10008625-10008788)
chr3 (14-177)||(10909235-10909398)
chr3 (38-233)||(11861325-11861520)
chr3 (14-229)||(13255663-13255878)
chr3 (14-168)||(53381961-53382115)
chr3 (38-231)||(16803910-16804103)
chr3 (17-192)||(14578363-14578538)
chr3 (17-196)||(14873527-14873706)
chr3 (155-258)||(15008653-15008756)
chr3 (52-243)||(15262592-15262783)
chr3 (14-229)||(24186163-24186378)
chr3 (14-180)||(16638795-16638961)
chr3 (14-180)||(43165697-43165863)
chr3 (143-243)||(12843171-12843271)
chr3 (153-249)||(15012836-15012932)
chr3 (20-192)||(15066084-15066256)
chr3 (53-213)||(19727752-19727911)
chr3 (121-196)||(3688949-3689024)
chr3 (14-180)||(12889731-12889897)
chr3 (95-221)||(13028366-13028491)
chr3 (62-180)||(48428469-48428587)
chr3 (14-177)||(15359077-15359240)
chr3 (14-177)||(20058996-20059159)
chr3 (26-130)||(2245612-2245716)
chr3 (125-229)||(15586445-15586549)
[»] scaffold0041 (1 HSPs)
scaffold0041 (14-258)||(42092-42336)
[»] chr7 (38 HSPs)
chr7 (14-258)||(40924504-40924748)
chr7 (14-258)||(26115277-26115521)
chr7 (14-258)||(49155619-49155863)
chr7 (14-258)||(26091485-26091729)
chr7 (13-258)||(13965354-13965599)
chr7 (14-258)||(21755730-21755974)
chr7 (17-258)||(13024662-13024903)
chr7 (17-258)||(12459946-12460187)
chr7 (17-258)||(16947162-16947403)
chr7 (17-258)||(11385119-11385360)
chr7 (17-258)||(12798194-12798435)
chr7 (14-258)||(13676769-13677007)
chr7 (14-254)||(14144983-14145223)
chr7 (29-246)||(19150341-19150558)
chr7 (29-246)||(20749740-20749957)
chr7 (14-258)||(14283061-14283305)
chr7 (92-232)||(15099368-15099508)
chr7 (92-258)||(18050718-18050884)
chr7 (17-258)||(13004783-13005024)
chr7 (74-258)||(12712410-12712594)
chr7 (14-229)||(11549814-11550029)
chr7 (14-229)||(12690844-12691059)
chr7 (14-180)||(10873853-10874019)
chr7 (77-258)||(12203550-12203731)
chr7 (56-232)||(14260975-14261151)
chr7 (98-213)||(15627886-15628001)
chr7 (38-233)||(9591706-9591901)
chr7 (14-177)||(13689436-13689599)
chr7 (29-196)||(14957884-14958051)
chr7 (14-177)||(15157769-15157932)
chr7 (62-177)||(18181138-18181253)
chr7 (121-229)||(11234032-11234140)
chr7 (53-208)||(14043062-14043217)
chr7 (53-208)||(14353092-14353247)
chr7 (38-192)||(11984375-11984529)
chr7 (62-248)||(17703212-17703398)
chr7 (62-196)||(44788111-44788245)
chr7 (51-192)||(15145669-15145810)
[»] scaffold0276 (1 HSPs)
scaffold0276 (14-258)||(23626-23870)
[»] chr5 (40 HSPs)
chr5 (14-258)||(14883873-14884117)
chr5 (14-258)||(22505921-22506165)
chr5 (14-258)||(20345524-20345768)
chr5 (14-258)||(25851314-25851558)
chr5 (17-258)||(23077790-23078031)
chr5 (53-215)||(21410437-21410599)
chr5 (17-232)||(21870163-21870378)
chr5 (17-232)||(21874443-21874658)
chr5 (14-258)||(16257918-16258162)
chr5 (14-258)||(22591637-22591881)
chr5 (14-258)||(22595192-22595436)
chr5 (74-246)||(23563110-23563282)
chr5 (92-258)||(17266294-17266460)
chr5 (28-258)||(21983073-21983303)
chr5 (52-215)||(23474497-23474660)
chr5 (74-213)||(21631341-21631480)
chr5 (17-196)||(23526373-23526552)
chr5 (14-177)||(22138006-22138169)
chr5 (62-180)||(27521741-27521859)
chr5 (53-213)||(21331910-21332070)
chr5 (26-246)||(21560919-21561139)
chr5 (50-246)||(26735646-26735842)
chr5 (14-177)||(14996624-14996787)
chr5 (14-177)||(22329772-22329935)
chr5 (14-229)||(29472958-29473173)
chr5 (62-229)||(37288429-37288596)
chr5 (155-245)||(23669887-23669977)
chr5 (14-180)||(27665388-27665554)
chr5 (26-258)||(43122709-43122941)
chr5 (14-180)||(16359837-16360003)
chr5 (83-233)||(23461256-23461406)
chr5 (14-180)||(34569829-34569995)
chr5 (38-230)||(23537121-23537313)
chr5 (53-233)||(25429705-25429885)
chr5 (14-177)||(22351257-22351420)
chr5 (62-177)||(27613694-27613809)
chr5 (62-180)||(40712115-40712233)
chr5 (62-177)||(19773298-19773413)
chr5 (134-248)||(18782384-18782498)
chr5 (121-177)||(27682392-27682448)
[»] chr1 (32 HSPs)
chr1 (14-258)||(48426247-48426491)
chr1 (14-258)||(31536769-31537013)
chr1 (14-258)||(38909598-38909842)
chr1 (14-258)||(37680423-37680667)
chr1 (14-258)||(52989115-52989358)
chr1 (16-258)||(20297757-20297999)
chr1 (29-258)||(21961401-21961630)
chr1 (14-258)||(20074481-20074725)
chr1 (17-258)||(24096390-24096631)
chr1 (14-229)||(19857677-19857892)
chr1 (60-258)||(20832719-20832916)
chr1 (83-232)||(22015586-22015735)
chr1 (56-232)||(21742366-21742542)
chr1 (53-232)||(21738847-21739026)
chr1 (14-229)||(19109739-19109953)
chr1 (53-213)||(16379482-16379642)
chr1 (17-192)||(21752456-21752631)
chr1 (52-210)||(21044964-21045122)
chr1 (77-258)||(18273141-18273322)
chr1 (52-213)||(22117102-22117263)
chr1 (14-258)||(20853532-20853776)
chr1 (74-229)||(22400689-22400844)
chr1 (121-196)||(41350550-41350625)
chr1 (62-177)||(51330315-51330430)
chr1 (14-180)||(33387804-33387970)
chr1 (121-196)||(16347477-16347552)
chr1 (121-196)||(16354125-16354200)
chr1 (57-232)||(17041831-17042006)
chr1 (14-177)||(21842633-21842796)
chr1 (74-182)||(20921858-20921966)
chr1 (74-192)||(22402001-22402119)
chr1 (121-177)||(21833723-21833779)
[»] chr2 (24 HSPs)
chr2 (14-244)||(20848561-20848789)
chr2 (17-258)||(19716260-19716501)
chr2 (17-258)||(19720823-19721064)
chr2 (52-246)||(23274564-23274758)
chr2 (17-258)||(23097261-23097502)
chr2 (14-258)||(12577312-12577556)
chr2 (14-196)||(44382813-44382995)
chr2 (26-258)||(21901496-21901728)
chr2 (53-215)||(19817822-19817984)
chr2 (62-177)||(10871887-10872002)
chr2 (14-177)||(24265407-24265570)
chr2 (17-196)||(24678508-24678687)
chr2 (82-204)||(30208228-30208350)
chr2 (20-196)||(23028708-23028884)
chr2 (14-180)||(9338616-9338782)
chr2 (14-180)||(9487250-9487416)
chr2 (14-196)||(24873993-24874175)
chr2 (148-258)||(28350834-28350944)
chr2 (62-180)||(16984274-16984392)
chr2 (62-196)||(17002018-17002152)
chr2 (152-213)||(24817218-24817279)
chr2 (101-196)||(23039904-23039999)
chr2 (62-180)||(22322633-22322751)
chr2 (86-232)||(23116371-23116517)
[»] chr4 (38 HSPs)
chr4 (14-258)||(3261494-3261738)
chr4 (14-258)||(7357595-7357839)
chr4 (14-258)||(29450237-29450481)
chr4 (14-258)||(44658566-44658810)
chr4 (14-258)||(11203932-11204176)
chr4 (20-258)||(20893359-20893597)
chr4 (14-258)||(16150964-16151208)
chr4 (14-258)||(16155110-16155354)
chr4 (52-258)||(14993105-14993311)
chr4 (14-232)||(15267130-15267348)
chr4 (83-258)||(18259769-18259944)
chr4 (83-258)||(15073687-15073862)
chr4 (92-258)||(51603570-51603736)
chr4 (92-258)||(53750248-53750414)
chr4 (20-208)||(8414-8602)
chr4 (14-229)||(14683921-14684136)
chr4 (50-208)||(15512-15670)
chr4 (95-213)||(14697474-14697592)
chr4 (53-213)||(16219561-16219721)
chr4 (53-213)||(16222881-16223041)
chr4 (38-233)||(13513703-13513898)
chr4 (133-192)||(14162864-14162923)
chr4 (155-258)||(27903713-27903816)
chr4 (14-180)||(19775236-19775402)
chr4 (77-258)||(13879437-13879618)
chr4 (20-233)||(16350188-16350401)
chr4 (14-229)||(19635490-19635705)
chr4 (14-177)||(40476446-40476609)
chr4 (62-196)||(8389799-8389933)
chr4 (97-258)||(8709005-8709166)
chr4 (14-177)||(8050066-8050229)
chr4 (14-177)||(14300422-14300585)
chr4 (57-232)||(18604302-18604477)
chr4 (62-180)||(17091640-17091758)
chr4 (14-180)||(23959150-23959316)
chr4 (14-229)||(12479954-12480169)
chr4 (62-180)||(16233483-16233601)
chr4 (62-180)||(27714739-27714857)
[»] chr6 (37 HSPs)
chr6 (14-258)||(24367592-24367836)
chr6 (17-258)||(10465696-10465937)
chr6 (14-258)||(18797882-18798126)
chr6 (14-258)||(19438194-19438438)
chr6 (98-258)||(24515343-24515503)
chr6 (14-255)||(14376761-14377002)
chr6 (17-258)||(21566839-21567080)
chr6 (53-258)||(25771036-25771241)
chr6 (17-246)||(19456227-19456456)
chr6 (17-246)||(19466372-19466601)
chr6 (53-213)||(30677908-30678068)
chr6 (14-210)||(34642430-34642626)
chr6 (14-229)||(5836076-5836291)
chr6 (143-258)||(21474792-21474907)
chr6 (14-177)||(22829234-22829397)
chr6 (52-221)||(18660148-18660317)
chr6 (52-251)||(23081622-23081821)
chr6 (53-258)||(19486178-19486383)
chr6 (53-221)||(18326089-18326254)
chr6 (17-258)||(19881588-19881829)
chr6 (14-177)||(2871650-2871813)
chr6 (14-171)||(27205898-27206055)
chr6 (14-171)||(27243173-27243330)
chr6 (14-258)||(15462528-15462772)
chr6 (95-258)||(16813832-16813995)
chr6 (62-177)||(25115822-25115937)
chr6 (14-180)||(28312897-28313063)
chr6 (195-258)||(8720731-8720794)
chr6 (74-196)||(27558874-27558996)
chr6 (14-180)||(28260045-28260211)
chr6 (14-180)||(28285705-28285871)
chr6 (14-180)||(28338794-28338960)
chr6 (14-168)||(29589287-29589441)
chr6 (57-182)||(18182276-18182401)
chr6 (20-233)||(21765029-21765242)
chr6 (146-207)||(23084802-23084863)
chr6 (68-243)||(22437076-22437251)
[»] scaffold1426 (1 HSPs)
scaffold1426 (14-258)||(1310-1554)
[»] scaffold0001 (2 HSPs)
scaffold0001 (23-258)||(514065-514300)
scaffold0001 (152-213)||(442054-442115)
[»] scaffold1845 (1 HSPs)
scaffold1845 (14-258)||(1007-1251)
[»] scaffold0523 (2 HSPs)
scaffold0523 (14-258)||(11446-11690)
scaffold0523 (74-232)||(5823-5978)
[»] scaffold0118 (1 HSPs)
scaffold0118 (14-258)||(818-1062)
[»] scaffold2165 (1 HSPs)
scaffold2165 (14-254)||(506-746)
[»] scaffold0068 (1 HSPs)
scaffold0068 (20-258)||(66817-67055)
[»] scaffold0310 (1 HSPs)
scaffold0310 (20-258)||(11334-11572)
[»] scaffold0457 (1 HSPs)
scaffold0457 (14-191)||(13757-13934)
[»] scaffold0188 (1 HSPs)
scaffold0188 (17-258)||(33078-33319)
[»] scaffold0088 (1 HSPs)
scaffold0088 (14-191)||(30334-30511)
[»] scaffold1517 (1 HSPs)
scaffold1517 (17-258)||(1193-1434)
[»] scaffold0113 (1 HSPs)
scaffold0113 (20-172)||(17682-17834)
[»] scaffold0235 (2 HSPs)
scaffold0235 (14-258)||(8165-8409)
scaffold0235 (14-258)||(18379-18623)
[»] scaffold0190 (1 HSPs)
scaffold0190 (60-258)||(30075-30273)
[»] scaffold0020 (2 HSPs)
scaffold0020 (14-258)||(98286-98530)
scaffold0020 (83-232)||(176370-176519)
[»] scaffold0009 (2 HSPs)
scaffold0009 (17-258)||(251976-252217)
scaffold0009 (38-248)||(229579-229789)
[»] scaffold0348 (2 HSPs)
scaffold0348 (14-258)||(17187-17431)
scaffold0348 (76-258)||(4614-4796)
[»] scaffold0034 (3 HSPs)
scaffold0034 (14-258)||(11609-11853)
scaffold0034 (14-258)||(1655-1899)
scaffold0034 (155-258)||(70729-70832)
[»] scaffold0010 (3 HSPs)
scaffold0010 (14-258)||(39038-39280)
scaffold0010 (52-213)||(5317-5478)
scaffold0010 (38-258)||(14781-15001)
[»] scaffold1530 (1 HSPs)
scaffold1530 (14-258)||(861-1105)
[»] scaffold1299 (1 HSPs)
scaffold1299 (18-258)||(1555-1795)
[»] scaffold0476 (1 HSPs)
scaffold0476 (17-258)||(251-492)
[»] scaffold0167 (1 HSPs)
scaffold0167 (14-255)||(5413-5654)
[»] scaffold0003 (2 HSPs)
scaffold0003 (17-258)||(203738-203979)
scaffold0003 (14-177)||(424746-424909)
[»] scaffold0076 (1 HSPs)
scaffold0076 (14-258)||(53126-53370)
[»] scaffold0114 (2 HSPs)
scaffold0114 (14-258)||(40415-40659)
scaffold0114 (42-196)||(17080-17234)
[»] scaffold0067 (4 HSPs)
scaffold0067 (14-258)||(64305-64549)
scaffold0067 (14-258)||(48883-49127)
scaffold0067 (14-258)||(57917-58161)
scaffold0067 (17-232)||(30007-30222)
[»] scaffold0765 (1 HSPs)
scaffold0765 (17-258)||(5963-6204)
[»] scaffold0222 (2 HSPs)
scaffold0222 (17-258)||(193-434)
scaffold0222 (74-258)||(21171-21355)
[»] scaffold0005 (1 HSPs)
scaffold0005 (17-258)||(263583-263824)
[»] scaffold0058 (1 HSPs)
scaffold0058 (14-258)||(22479-22723)
[»] scaffold0023 (1 HSPs)
scaffold0023 (17-258)||(164107-164348)
[»] scaffold0074 (1 HSPs)
scaffold0074 (14-258)||(15429-15673)
[»] scaffold0004 (2 HSPs)
scaffold0004 (14-258)||(319600-319844)
scaffold0004 (166-258)||(326064-326155)
[»] scaffold0434 (1 HSPs)
scaffold0434 (83-258)||(5674-5849)
[»] scaffold1433 (1 HSPs)
scaffold1433 (83-232)||(1083-1232)
[»] scaffold0404 (1 HSPs)
scaffold0404 (83-232)||(8127-8276)
[»] scaffold0317 (1 HSPs)
scaffold0317 (14-258)||(2988-3226)
[»] scaffold0108 (1 HSPs)
scaffold0108 (17-258)||(50462-50703)
[»] scaffold0046 (1 HSPs)
scaffold0046 (53-258)||(70465-70670)
[»] scaffold0664 (1 HSPs)
scaffold0664 (74-258)||(7395-7579)
[»] scaffold0420 (1 HSPs)
scaffold0420 (14-258)||(8971-9215)
[»] scaffold0367 (1 HSPs)
scaffold0367 (14-258)||(8724-8968)
[»] scaffold0239 (1 HSPs)
scaffold0239 (74-258)||(9550-9734)
[»] scaffold0151 (1 HSPs)
scaffold0151 (14-258)||(245-489)
[»] scaffold0490 (2 HSPs)
scaffold0490 (17-232)||(3248-3463)
scaffold0490 (74-196)||(310-432)
[»] scaffold0708 (1 HSPs)
scaffold0708 (144-249)||(4978-5083)
[»] scaffold0243 (2 HSPs)
scaffold0243 (14-258)||(9477-9719)
scaffold0243 (50-251)||(23684-23885)
[»] scaffold0148 (1 HSPs)
scaffold0148 (53-218)||(2396-2561)
[»] scaffold0011 (2 HSPs)
scaffold0011 (14-231)||(153876-154093)
scaffold0011 (53-213)||(23275-23435)
[»] scaffold0706 (1 HSPs)
scaffold0706 (14-258)||(4912-5156)
[»] scaffold0072 (1 HSPs)
scaffold0072 (14-258)||(54404-54648)
[»] scaffold0518 (1 HSPs)
scaffold0518 (14-249)||(2197-2432)
[»] scaffold2062 (1 HSPs)
scaffold2062 (80-246)||(641-807)
[»] scaffold0056 (1 HSPs)
scaffold0056 (74-232)||(646-804)
[»] scaffold0031 (1 HSPs)
scaffold0031 (98-248)||(115991-116141)
[»] scaffold0053 (2 HSPs)
scaffold0053 (56-245)||(62517-62706)
scaffold0053 (17-203)||(65028-65214)
[»] scaffold0017 (1 HSPs)
scaffold0017 (17-246)||(4160-4388)
[»] scaffold0106 (1 HSPs)
scaffold0106 (74-258)||(34694-34878)
[»] scaffold1032 (1 HSPs)
scaffold1032 (14-232)||(518-736)
[»] scaffold0865 (1 HSPs)
scaffold0865 (74-232)||(1035-1193)
[»] scaffold0133 (1 HSPs)
scaffold0133 (74-232)||(28048-28206)
[»] scaffold0266 (1 HSPs)
scaffold0266 (53-258)||(16994-17199)
[»] scaffold0100 (1 HSPs)
scaffold0100 (53-213)||(16351-16511)
[»] scaffold0156 (1 HSPs)
scaffold0156 (14-222)||(37332-37540)
[»] scaffold0335 (1 HSPs)
scaffold0335 (83-232)||(4076-4225)
[»] scaffold0146 (1 HSPs)
scaffold0146 (98-246)||(71-219)
[»] scaffold0429 (1 HSPs)
scaffold0429 (74-221)||(1185-1332)
[»] scaffold0751 (1 HSPs)
scaffold0751 (80-258)||(5538-5715)
[»] scaffold0035 (2 HSPs)
scaffold0035 (80-230)||(6190-6339)
scaffold0035 (53-210)||(40850-41007)
[»] scaffold0609 (2 HSPs)
scaffold0609 (77-258)||(7914-8095)
scaffold0609 (186-258)||(1296-1368)
[»] scaffold1914 (1 HSPs)
scaffold1914 (17-213)||(936-1132)
[»] scaffold0192 (1 HSPs)
scaffold0192 (77-237)||(29905-30065)
[»] scaffold0405 (1 HSPs)
scaffold0405 (77-228)||(5989-6140)
[»] scaffold0297 (1 HSPs)
scaffold0297 (17-192)||(7363-7538)
[»] scaffold0261 (2 HSPs)
scaffold0261 (17-227)||(12120-12330)
scaffold0261 (17-227)||(20300-20510)
[»] scaffold0026 (1 HSPs)
scaffold0026 (54-232)||(52034-52212)
[»] scaffold1274 (1 HSPs)
scaffold1274 (52-213)||(20-180)
[»] scaffold0077 (1 HSPs)
scaffold0077 (52-245)||(57355-57548)
[»] scaffold0529 (1 HSPs)
scaffold0529 (17-213)||(5490-5686)
[»] scaffold0130 (1 HSPs)
scaffold0130 (78-258)||(3659-3839)
[»] scaffold0075 (2 HSPs)
scaffold0075 (20-208)||(48137-48325)
scaffold0075 (50-208)||(55210-55368)
[»] scaffold0054 (1 HSPs)
scaffold0054 (170-258)||(63378-63466)
[»] scaffold0029 (3 HSPs)
scaffold0029 (20-196)||(8633-8809)
scaffold0029 (14-177)||(107480-107643)
scaffold0029 (150-258)||(115919-116027)
[»] scaffold0018 (2 HSPs)
scaffold0018 (17-213)||(23004-23200)
scaffold0018 (152-213)||(9192-9253)
[»] scaffold0042 (2 HSPs)
scaffold0042 (17-196)||(36526-36705)
scaffold0042 (148-213)||(26754-26819)
[»] scaffold0040 (2 HSPs)
scaffold0040 (74-213)||(18247-18386)
scaffold0040 (74-208)||(110670-110804)
[»] scaffold0585 (1 HSPs)
scaffold0585 (80-222)||(630-771)
[»] scaffold0270 (2 HSPs)
scaffold0270 (53-251)||(7237-7435)
scaffold0270 (53-251)||(14367-14565)
[»] scaffold0203 (1 HSPs)
scaffold0203 (14-180)||(3754-3920)
[»] scaffold0102 (1 HSPs)
scaffold0102 (134-232)||(43081-43179)
[»] scaffold0289 (1 HSPs)
scaffold0289 (20-233)||(170-383)
[»] scaffold0120 (2 HSPs)
scaffold0120 (19-192)||(11686-11859)
scaffold0120 (17-233)||(14466-14682)
[»] scaffold0104 (1 HSPs)
scaffold0104 (103-232)||(43211-43340)
[»] scaffold0621 (2 HSPs)
scaffold0621 (17-183)||(449-615)
scaffold0621 (17-183)||(4866-5032)
[»] scaffold0230 (1 HSPs)
scaffold0230 (53-221)||(18101-18266)
[»] scaffold0342 (1 HSPs)
scaffold0342 (52-213)||(14006-14167)
[»] scaffold0324 (1 HSPs)
scaffold0324 (42-186)||(2418-2562)
[»] scaffold0006 (1 HSPs)
scaffold0006 (143-251)||(104590-104698)
[»] scaffold1056 (1 HSPs)
scaffold1056 (77-232)||(2103-2257)
[»] scaffold0819 (1 HSPs)
scaffold0819 (59-258)||(471-670)
[»] scaffold0259 (1 HSPs)
scaffold0259 (14-229)||(8641-8856)
[»] scaffold0044 (2 HSPs)
scaffold0044 (14-229)||(3807-4022)
scaffold0044 (38-233)||(17542-17737)
[»] scaffold0411 (1 HSPs)
scaffold0411 (102-196)||(8830-8924)
[»] scaffold0064 (1 HSPs)
scaffold0064 (20-258)||(66239-66477)
[»] scaffold1220 (1 HSPs)
scaffold1220 (42-183)||(168-309)
[»] scaffold0993 (1 HSPs)
scaffold0993 (134-251)||(1346-1463)
[»] scaffold0084 (1 HSPs)
scaffold0084 (20-233)||(8605-8818)
[»] scaffold0081 (2 HSPs)
scaffold0081 (17-258)||(21961-22202)
scaffold0081 (17-258)||(37385-37626)
[»] scaffold1600 (1 HSPs)
scaffold1600 (17-213)||(468-664)
[»] scaffold0028 (3 HSPs)
scaffold0028 (14-173)||(11891-12050)
scaffold0028 (62-177)||(55439-55554)
scaffold0028 (14-173)||(21419-21578)
[»] scaffold0447 (1 HSPs)
scaffold0447 (143-213)||(1696-1766)
[»] scaffold0410 (1 HSPs)
scaffold0410 (38-196)||(560-718)
[»] scaffold0383 (1 HSPs)
scaffold0383 (143-213)||(4560-4630)
[»] scaffold0207 (1 HSPs)
scaffold0207 (17-243)||(4261-4487)
[»] scaffold0122 (1 HSPs)
scaffold0122 (134-192)||(40330-40388)
[»] scaffold0080 (3 HSPs)
scaffold0080 (20-258)||(32236-32474)
scaffold0080 (134-248)||(10062-10176)
scaffold0080 (134-248)||(12717-12831)
[»] scaffold0079 (1 HSPs)
scaffold0079 (20-233)||(36880-37093)
[»] scaffold1881 (1 HSPs)
scaffold1881 (20-232)||(189-401)
[»] scaffold0278 (1 HSPs)
scaffold0278 (143-243)||(3923-4023)
[»] scaffold0165 (1 HSPs)
scaffold0165 (164-232)||(12327-12395)
[»] scaffold0012 (1 HSPs)
scaffold0012 (101-213)||(216210-216322)
[»] scaffold0431 (1 HSPs)
scaffold0431 (14-177)||(10803-10965)
[»] scaffold0333 (1 HSPs)
scaffold0333 (148-243)||(19022-19117)
[»] scaffold0575 (1 HSPs)
scaffold0575 (50-208)||(10026-10184)
[»] scaffold0505 (1 HSPs)
scaffold0505 (53-215)||(2152-2313)
[»] scaffold0403 (1 HSPs)
scaffold0403 (102-196)||(15330-15424)
[»] scaffold0309 (1 HSPs)
scaffold0309 (102-196)||(19817-19911)
[»] scaffold0293 (1 HSPs)
scaffold0293 (53-215)||(15810-15972)
[»] scaffold0285 (1 HSPs)
scaffold0285 (38-248)||(5365-5575)
[»] scaffold0273 (1 HSPs)
scaffold0273 (56-258)||(397-599)
[»] scaffold0540 (1 HSPs)
scaffold0540 (103-196)||(10672-10765)
[»] scaffold0357 (1 HSPs)
scaffold0357 (143-208)||(17809-17874)
[»] scaffold0331 (1 HSPs)
scaffold0331 (146-183)||(14814-14851)
[»] scaffold0282 (1 HSPs)
scaffold0282 (52-213)||(13215-13376)
[»] scaffold0022 (2 HSPs)
scaffold0022 (143-208)||(42039-42104)
scaffold0022 (143-208)||(75759-75824)
[»] scaffold0679 (1 HSPs)
scaffold0679 (26-130)||(750-854)
[»] scaffold0305 (1 HSPs)
scaffold0305 (76-196)||(3283-3403)
[»] scaffold0177 (1 HSPs)
scaffold0177 (20-192)||(14750-14922)
[»] scaffold0098 (1 HSPs)
scaffold0098 (26-130)||(25945-26049)
[»] scaffold0319 (1 HSPs)
scaffold0319 (101-196)||(6919-7014)
[»] scaffold1423 (1 HSPs)
scaffold1423 (74-196)||(141-263)
[»] scaffold0546 (1 HSPs)
scaffold0546 (74-248)||(246-420)
[»] scaffold0109 (2 HSPs)
scaffold0109 (74-248)||(12887-13061)
scaffold0109 (14-175)||(41592-41753)
[»] scaffold2059 (1 HSPs)
scaffold2059 (143-231)||(601-689)
[»] scaffold0501 (1 HSPs)
scaffold0501 (136-192)||(347-403)
[»] scaffold0412 (1 HSPs)
scaffold0412 (20-108)||(15288-15376)
[»] scaffold0198 (1 HSPs)
scaffold0198 (29-177)||(30725-30873)


Alignment Details
Target: chr8 (Bit Score: 193; Significance: 1e-105; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 28984549 - 28984305
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||    
T  28984549 gacatcaaaagagccattggatatcaacagatcagagtcttttctgagttggttaacaggtgtaggatttatgaagaagacaccaaagctcattacaaga 28984450  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||| ||||||||    
T  28984449 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgcggacaagggaaagcagaggatgggtgatgataggaggcc 28984350  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| |||||||| ||||| ||||||||||| ||||||||    
T  28984349 caagaggagagatgctccagttgagattgtttgttacaagtgtgg 28984305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 16268367 - 16268611
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| || || ||||||||||| |||||||||||||| |||||||||||||| || || |||||||||||||||||||||||||||||||| || |    
T  16268367 gacatcaaaagggctattgggtatcagcagatcagagtcttctctgagttggttaatagttgtagaatttatgaagaagacaccaaagctcattacaata 16268466  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||| |||||| ||||||||    
T  16268467 taatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcttgctgacaaaggaaagcagaagatgagtgatgacaggaggcc 16268566  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     |||| ||| |||||||||  ||| ||||||||||| ||||||||    
T  16268567 taagaagagagatgctccttctgagattgtttgttacaagtgtgg 16268611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 17 - 258
Target Start/End: Original strand, 31413678 - 31413919
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||| ||||| |||||||||||  |||| | | | || ||| ||||||| ||||| ||||| || ||||| |||||||||||||||||||| || || |    
T  31413678 atcaaaagagctattgggtatcagaagattaaaattttctctaagttggtaaacagctgcaggatatatgaggaagacaccaaagctcattacaaaatga 31413777  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||| | |||||||||||||| |||| ||||||||| |||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||    
T  31413778 tgagtgagcgaaggggtaagggacagcagagtcgtcctaaaccttacagcgcccctgctgacaagggaaagcagagaatgaatgatgagaggaggcccaa 31413877  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||||| |||||||||||||| ||||||||||  ||||||||    
T  31413878 gaggagagatgctcctgttgaaattgtttgtttcaagtgtgg 31413919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 29300569 - 29300813
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| ||||| |||||||||||  |||| ||||| || |||||||| || | ||| ||||| || ||||| || ||||| ||||||||||| |||     
T  29300569 gacatcaaaagagctattgggtatcagaagattagagttttctctgagttagtaagcagctgcaggatatatgaggaggacacaaaagctcattacaagg 29300668  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||||||||||||||||||||  ||| ||||||||| ||||||||||||||||||||||| || ||||||| |||||||||||| ||||||||    
T  29300669 taatgagtgagaggaggggtaagggacattagagtcgtcctaaaccttacagtgctcctgctgacaaagggaagcagaagatgaatgatgataggaggcc 29300768  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||| | |||| ||| | ||| |||||||||| |||||||||    
T  29300769 caagaggggagatgttcccgctgaaattgtttgttttaagtgtgg 29300813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 22027423 - 22027667
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||| |||||||||||||| ||| | || ||||| ||||| |   | ||||| || ||||| || ||||| |||| ||||||||||     
T  22027423 gacatcaagagagccatagggtatcaacagattagaattttctctgatttggtaagtcgttgcaggatctatgaggaggacacaaaagatcattataagg 22027522  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||| | || ||||||||||| |||| ||||||||| || |||||||| |||||||||||||||||||| ||  |||||||||||||||||||    
T  22027523 tgatgagtgagcgaagtggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagattgaatgatgagaggaggcc 22027622  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||| ||||| |||||||||| ||| || |||||||| ||||||||    
T  22027623 caataggagagatgctcctgctgagatagtttgttacaagtgtgg 22027667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 53 - 258
Target Start/End: Complemental strand, 21929027 - 21928822
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    |||||||| ||||| | ||| || ||||| |||||||| || |||||||||||||| ||| | ||||||||| | || |||||||||||||||| |||||    
T  21929027 ttttctgaattggtaagcagctgtagaatctatgaagaggataccaaagctcattacaaggtgatgagtgagcgtagaggtaagggacaacagagtcgtc 21928928  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataa 252  Q
    |||| || || ||||||||||||||||| ||||| |||||| ||||||||||||||||||| | |||||| |||||||||  ||| ||| ||||||  ||    
T  21928927 ctaaaccgtatagtgctcctgctgacaaaggaaaacagaggctgaatgatgagaggaggcctaggaggagagatgctcctactgagattctttgtttcaa 21928828  T
Q  253 gtgtgg 258  Q
    ||||||    
T  21928827 gtgtgg 21928822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 258
Target Start/End: Complemental strand, 22054498 - 22054257
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||||||||| || || |||||||| ||| | || ||||| ||||| |   | ||||| || | ||| || ||||||||||||||||||||| | |    
T  22054498 atcaagagagccataggataccaacagattagaattttctctgatttggtgagtcgttgcaggatctgtgaggaggacaccaaagctcattataaggtga 22054399  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||| | || ||||||||||  |||| |||||||||||| |||||||| |||||||| ||||| ||||||||  | ||||||||||||||||| ||    
T  22054398 tgagtgagcgaagaggtaagggacggcagagtcgtcctaagccgtacagtgcccctgctgataagggtaagcagagacttaatgatgagaggaggccgaa 22054299  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     ||||| |||||| ||| ||| || ||||||| |||||||||    
T  22054298 taggagagatgcttctgctgagatagtttgttttaagtgtgg 22054257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 258
Target Start/End: Complemental strand, 19985779 - 19985574
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    |||||||| ||||| | ||| || || || |||||||| || |||||||||||||| ||| | ||||||||| | || || |||||| | |||| |||||    
T  19985779 ttttctgatttggtaagcagttgtaggatatatgaagaggataccaaagctcattacaaggtgatgagtgagcgcagtggcaagggatagcagagtcgtc 19985680  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataa 252  Q
    | ||||| || ||||| ||||| |||||||| || |||||||||| ||||||||||||||| |||||||| |||||||||  ||| ||||||||||  ||    
T  19985679 cgaagccgtatagtgcccctgcggacaagggtaaacagaggatgattgatgagaggaggcctaagaggagagatgctcctactgagattgtttgtttcaa 19985580  T
Q  253 gtgtgg 258  Q
    ||||||    
T  19985579 gtgtgg 19985574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 26 - 258
Target Start/End: Complemental strand, 20391712 - 20391480
Alignment:
Q  26 gccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgaga 125  Q
    ||||||||||||||| |||||||    |||||||| ||||| | ||| || |||||||||||||| || |||||||||||||||||| |||||||||||     
T  20391712 gccattgggtatcaaaagatcaggcaattttctgaattggtgagcagctgtagaatttatgaagaggataccaaagctcattataaggttatgagtgagc 20391613  T
Q  126 ggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggaggga 225  Q
    |||||   || || || ||   |||||| ||||| |||||||||||||||||||| || || || ||  |||||||||||||||| || ||||| || ||    
T  20391612 ggaggaacaaaggtcagcaaggtcgtccgaagccctacagtgctcctgctgacaaagggaaacaaagattgaatgatgagaggagacctaagagtagaga 20391513  T
Q  226 tgctcctgttgatattgtttgttataagtgtgg 258  Q
    || ||||  ||| |||||||| || ||||||||    
T  20391512 tgttccttctgagattgtttgctacaagtgtgg 20391480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 192
Target Start/End: Complemental strand, 21672150 - 21671975
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||| || ||||| || ||  ||||| |||||||||||||| |||| | ||| ||||| |||||||| || ||  ||||  ||||||| ||||||     
T  21672150 atcaagagggcaattggttaccagaagatccgagtcttttctgagctggtgagcagttgcaggatttatgaggaggatgccaagactcattacaagattg 21672051  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagag 192  Q
    ||| |||| | | ||  ||||| || |||| |||||||||||||||||||||||||||||| ||||| || |||||    
T  21672050 tgaatgagcgaaaggccaagggtcagcagagtcgtcctaagccttacagtgctcctgctgataagggtaaacagag 21671975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 243
Target Start/End: Complemental strand, 22990644 - 22990454
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    ||||||||| |||| | ||| ||||| |||||||| ||||| || || |||||||| |||||| ||| |||| |||  || || || || || | |||||    
T  22990644 ttttctgagctggtgagcagttgcaggatttatgaggaagatactaaggctcattacaagattgtgaatgagcggaaaggcaaaggtcagcaaagtcgtc 22990545  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgt 243  Q
    | ||||||||||||||||||||||| ||||| ||  |||| |||| |||||||||| |||| | || ||  || ||||||||||| |||||    
T  22990544 caaagccttacagtgctcctgctgataagggcaaatagagaatgattgatgagaggcggcctaggaagaaagacgctcctgttgagattgt 22990454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 215
Target Start/End: Original strand, 22710423 - 22710614
Alignment:
Q  24 gagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtga 123  Q
    |||| |||||||||||  ||||| ||   ||||| |||||||| |  || |||| |||||||||||| |||||||||||||||||||||||| ||| |||    
T  22710423 gagcgattgggtatcagaagatccgacagttttccgagttggtaagtagctgcaaaatttatgaagatgacaccaaagctcattataagattctgaatga 22710522  T
Q  124 gaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggccca 215  Q
    |  ||||||||||   ||||| |  |||  |||||||||||| ||||| | ||| ||||| ||  ||| | |||||||||||| ||| ||||    
T  22710523 gcagaggggtaagtaccaacaaaggcgtggtaagccttacagcgctccgggtgataagggtaaatagatggtgaatgatgagaagagaccca 22710614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 221
Target Start/End: Complemental strand, 3274705 - 3274537
Alignment:
Q  52 cttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgt 151  Q
    |||||||||  |||| | ||| |||||||| ||||| || || || | ||||||||| || ||  ||| ||||| ||| ||||| || || || | ||||    
T  3274705 cttttctgaactggtgagcagctgcagaatctatgaggaggatacaagagctcattacaaaatagtgaatgagaagagaggtaaaggccagcaaagtcgt 3274606  T
Q  152 cctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagagga 221  Q
    || |||||||||||||||||||| || |||||  |||||||| |||||||||||||| | ||||||||||    
T  3274605 ccaaagccttacagtgctcctgc-gataagggtgagcagagggtgaatgatgagaggggacccaagagga 3274537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 18860212 - 18860049
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || |||||||| |||||| | ||||| ||| | || |||||||| || || || || |||||||| || || || ||||| || |||     
T  18860212 gacatcaagagggcgattgggtaccaacagctgagagtttttccggatttggttaatagctgtaggatctatgaagaggatacgaaggctcactacaagg 18860113  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga 177  Q
    |  ||| |||||||| ||| |||||||| |||| |||||||||||| |||||||| || |||||    
T  18860112 tagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctga 18860049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 19481325 - 19481400
Alignment:
Q  121 tgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatg 196  Q
    |||||||| |||||||||||| |||| |||||||||||| |||||||| || ||||||||||| || |||| ||||    
T  19481325 tgagaggaagggtaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaagggtaaacagaagatg 19481400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 243
Target Start/End: Complemental strand, 22524019 - 22523919
Alignment:
Q  143 cagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattg 242  Q
    |||| |||||| |||||||||||||| |||||||| |||||||| || ||  | |||||||||||| |||| | || ||  |||||||||||||| ||||    
T  22524019 cagagtcgtccaaagccttacagtgcccctgctgataagggaaaacaaagagttaatgatgagaggcggcctaggaagaaagatgctcctgttgagattg 22523920  T
Q  243 t 243  Q
    |    
T  22523919 t 22523919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 229
Target Start/End: Original strand, 22126153 - 22126320
Alignment:
Q  62 ttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagcctt 161  Q
    |||||||| || ||||| || |||||||| || || || ||||| || ||| |  ||| |||||||| ||| |||||||| |||| |||||||||||| |    
T  22126153 ttggttaatagctgcaggatctatgaagaggatacgaaggctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgt 22126252  T
Q  162 acagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgct 229  Q
    ||||||| || ||||| || || || |||||||||   ||||| ||| |||| |||| || |||||||    
T  22126253 acagtgcccccgctgataaagggaaacagaggatggtcgatgataggcggcctaagaagaaggatgct 22126320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 112
Target Start/End: Original strand, 21970694 - 21970792
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataag 112  Q
    |||||||||||||||||||| |||||  |||| |||  ||||||||||||||| |  || || || |||||||| || || |||||||| |||||||||    
T  21970694 gacatcaagagagccattggttatcagaagattagaaacttttctgagttggtgagtagctgtaggatttatgaggatgataccaaagcccattataag 21970792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 192
Target Start/End: Complemental strand, 32603783 - 32603605
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || || || ||||||||  || |||| ||  |||| ||||| ||||| || || || || ||||| || |||| ||||||||| |||     
T  32603783 gacatcaagagggcgatcggatatcaacaactccgagttttccctgatttggtgaacagctgtaggatctacgaagaggataccagagctcattacaagg 32603684  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagag 192  Q
    || | | |||||||| |  |||||| || |||| ||| ||||||||||| ||||| |||||||| ||||| ||||||||    
T  32603683 ttgttaatgagaggaagactaagggccagcagagtcgccctaagccttatagtgcccctgctgataagggcaagcagag 32603605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 22004225 - 22004322
Alignment:
Q  15 acatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataag 112  Q
    ||||||||||||||||||| |||||  |||| | |  ||||||| ||||||| |  || || || ||||||||||| || ||||||||||||||||||    
T  22004225 acatcaagagagccattggttatcagaagattataaacttttctaagttggtgagtagctgtaggatttatgaagatgataccaaagctcattataag 22004322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 231
Target Start/End: Complemental strand, 22043441 - 22043248
Alignment:
Q  38 caacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagg 137  Q
    ||||||||| |||| ||  |||| |||||||| || ||||| |||||||| || || ||||| |||||||| ||| || ||| |||| ||| |   ||||    
T  22043441 caacagatccgagttttccctgatttggttaatagatgcaggatttatgaggaggataccaaggctcattacaaggttgtgaatgagcggaagaccaagg 22043342  T
Q  138 gacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcc 231  Q
    | || |||| ||  ||||||||||| ||||| ||| |||||||||| || ||||| |||   ||||| ||| |||| |||| || |||||||||    
T  22043341 gccagcagagtcaccctaagccttatagtgcccctactgacaagggcaaacagagaatggtcgatgataggcggcctaagaagaaggatgctcc 22043248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 243
Target Start/End: Original strand, 22421096 - 22421265
Alignment:
Q  74 tgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctg 173  Q
    ||||| |||||||| || || || || |||||||| |||||| ||| |||| |||  |  || || || |||| |||||| |||||||||||||||||||    
T  22421096 tgcaggatttatgaggaggatactaaggctcattacaagattgtgaatgagcggaaagtcaaaggtcagcagagtcgtccaaagccttacagtgctcctg 22421195  T
Q  174 ctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgt 243  Q
    || | ||||| || ||||| |||  |||||||||| |||| | || ||  |||||| | |||||||||||    
T  22421196 ctaataagggcaaacagagaatggttgatgagaggcggcctaggaagaaagatgcttcggttgatattgt 22421265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 258
Target Start/End: Complemental strand, 22374423 - 22374263
Alignment:
Q  98 aaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatga 197  Q
    ||||||||||||||| | ||||||||| | || |||||||||||  ||| |||||| || || || ||||| ||||||| ||| || || || ||  | |    
T  22374423 aaagctcattataaggtgatgagtgagcgcagaggtaagggacagtagagtcgtccgaaaccgtatagtgcccctgctgtcaaaggtaaacaaagactta 22374324  T
Q  198 atgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||| ||||||||||| | |||||| ||| |||||  ||| ||||| ||||  ||||||||    
T  22374323 atgaggagaggaggcctaggaggagagattctcctactgagattgtctgtttcaagtgtgg 22374263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 177
Target Start/End: Complemental strand, 19115987 - 19115872
Alignment:
Q  62 ttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagcctt 161  Q
    |||||||| || ||||| || ||||| || || ||||| ||||| || ||| |  ||| ||| |||| ||| |||||||| |||| |||||||||||| |    
T  19115987 ttggttaatagctgcaggatctatgaggaggataccaaggctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgt 19115888  T
Q  162 acagtgctcctgctga 177  Q
    ||||||| ||||||||    
T  19115887 acagtgcccctgctga 19115872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 20015409 - 20015572
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||| || |||||| | ||||| |||   || ||||| || || ||||| || || ||||| || ||||| ||||| || |||     
T  20015409 gacatcaagagggcgattggataccaacagctgagagtttttcaggatttggtcaatagctgcaggatctacgaagaggataccaaggctcactacaagg 20015508  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga 177  Q
    |  ||| ||| |||| ||| |||||||| |||| |||||||||||| |||||||| ||||||||    
T  20015509 tagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctgctga 20015572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 180
Target Start/End: Original strand, 17671216 - 17671334
Alignment:
Q  62 ttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagcctt 161  Q
    |||||||| || ||||| || |||||||| || || || ||||| || ||| |  ||| ||| |||| ||| |||||||| |||| |||||||||||| |    
T  17671216 ttggttaatagctgcaggatctatgaagaggatacgaaggctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgt 17671315  T
Q  162 acagtgctcctgctgacaa 180  Q
    ||||||| || ||||||||    
T  17671316 acagtgcccccgctgacaa 17671334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 248
Target Start/End: Original strand, 30310407 - 30310521
Alignment:
Q  134 aagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctg 233  Q
    ||||| || |||| ||| ||||| ||||| ||||| |||||||| ||||| || ||||| |||   ||||| ||| |||| |||| || |||||||||||    
T  30310407 aagggtcagcagagtcgccctaaaccttatagtgcccctgctgataagggcaaacagagaatggtcgatgataggcggccaaagaagaaggatgctcctg 30310506  T
Q  234 ttgatattgtttgtt 248  Q
      |||||||||||||    
T  30310507 cggatattgtttgtt 30310521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 189; Significance: 1e-102; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 47127145 - 47126901
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| ||||| ||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  47127145 gacatcaaaagagctattgggtatcagcagatcagagtcttctctgagttggttaataggtgcagaatctatgaagaagacaccaaagctcattataaga 47127046  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||| ||||||||    
T  47127045 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaggatgggtgatgataggaggcc 47126946  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| |||||||||||||| |||||||| || ||||||||    
T  47126945 caagaggagagatgctcctgttgagattgtttgctacaagtgtgg 47126901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 28757520 - 28757276
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| ||||| ||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||    
T  28757520 gacatcaaaagagctattgggtatcagcagatcagagtcttctctgagttggttaataggtgcagaatctatgaagaagacaccaaagctcattacaaga 28757421  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||  |||||| ||||||||    
T  28757420 taatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgggtgatgataggaggcc 28757321  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| |||||||||||||| |||||||| || ||||||||    
T  28757320 caagaggagagatgctcctgttgagattgtttgctacaagtgtgg 28757276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 10409169 - 10408925
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| ||||| ||||| ||||| ||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||    
T  10409169 gacatcaaaagagctattggatatcagcagatcagagttttttctgagttggttaataggtgcagaatctatgaagaagacaccaaagctcattacaaga 10409070  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || |||| ||||  |||||| ||||||||    
T  10409069 taatgagtgagaggaggggtaagggacaccagagtcgtcctaagccttacagtgctcctgctgacaagggtaaacagaagatgggtgatgataggaggcc 10408970  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| |||||||| | ||| ||||||||||| || |||||    
T  10408969 caagaggagagatgctccagctgagattgtttgttacaaatgtgg 10408925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 20 - 258
Target Start/End: Original strand, 16326641 - 16326881
Alignment:
Q  20 aagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatga 119  Q
    |||||||| ||||||||||| |||||||||||||| ||||||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||    
T  16326641 aagagagctattgggtatcagcagatcagagtcttctctgagttggtaaacagttgcaggatttatgaagaagacaccaaagctcattacaagataatga 16326740  T
Q  120 gtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagag 219  Q
    ||||||||||||| |||||||| |||| ||||||||||||| ||||||||||||||||||| |||||||| | | |||||||||| ||||| ||||||||    
T  16326741 gtgagaggaggggcaagggacagcagagtcgtcctaagcctgacagtgctcctgctgacaaaggaaagcaaaaggtgaatgatgataggagacccaagag 16326840  T
Q  220 gaggga-tgctcctgttgata-ttgtttgttataagtgtgg 258  Q
    ||| || |||||||| ||| | |||||||||||||||||||    
T  16326841 gagagactgctcctgctgagacttgtttgttataagtgtgg 16326881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 17 - 258
Target Start/End: Original strand, 11958112 - 11958353
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||| ||||| |||||||||||  |||| ||||| || ||||||||||| | ||| ||| | |||||||| |||||||| |||| |||||| ||| | |    
T  11958112 atcaaaagagctattgggtatcagaagattagagttttctctgagttggtaagcagctgcgggatttatgaggaagacacaaaagttcattacaaggtga 11958211  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    ||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| || || ||||| ||||||||||| |||||||  ||    
T  11958212 tgagtgagaggagaggtaagggacagcagaatcgtcctaaaccttacagtgctcctgctgacaaagggaaacagagaatgaatgatgataggaggcttaa 11958311  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||||| |||||||||| ||| ||||||||||||||||||||    
T  11958312 gaggagagatgctcctgctgaaattgtttgttataagtgtgg 11958353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 12357455 - 12357699
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||||||||||||| |||||||  |||| ||| | || ||||| ||||| |  || ||||| || |||||||||||||| ||||||||||| |||     
T  12357455 gacatcaagagagccattaggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatatgaagaagacactaaagctcattacaagg 12357554  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||| | || ||||||||||| |||| ||||||||| || || |||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  12357555 tgatgagtgagcgcagaggtaagggacatcagagtcgtcctaaaccatatagtgctcctgctgacaagggaaagtagaggctgaatgatgagaggaggcc 12357654  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| ||| |||||| ||| |||||||| || ||||||||    
T  12357655 caagaggagagatactcctgctgagattgtttgctacaagtgtgg 12357699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 16384300 - 16384544
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||| || || |||||||| ||| | || ||||| ||||| |   | || || || ||||| || |||| ||||||||||||||||     
T  16384300 gacatcaagagagccataggataccaacagattagaattttctctgatttggtaagttgctgtaggatctatgaggaggacagcaaagctcattataagg 16384399  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||| | || |||||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||||||  | |||||||||||||||||    
T  16384400 tgatgagtgagcgaagaggtaagggacaacagagtcgtcctaagccatacagtgcccctgctgacaagggtaagcagagacttaatgatgagaggaggcc 16384499  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     || ||||| |||||||||| ||| || ||||||| |||||||||    
T  16384500 gaataggagagatgctcctgctgagatagtttgttttaagtgtgg 16384544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 77 - 258
Target Start/End: Complemental strand, 17189512 - 17189331
Alignment:
Q  77 agaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctg 176  Q
    ||||| |||||||| ||||| ||||||||||| ||| | ||||||||  | || || ||||| || |||| |||||| ||||| |||||||||||||||     
T  17189512 agaatctatgaagaggacacaaaagctcattacaaggtgatgagtgaccgcagaggcaagggccagcagagtcgtccgaagccgtacagtgctcctgcta 17189413  T
Q  177 acaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||||||||||  | ||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||    
T  17189412 acaagggaaagcagagatttaatgatgagaggaggtccaagaggagagatgctcctgttgatattgtttgttttaagtgtgg 17189331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 16831456 - 16831700
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||| ||||| |||||||| ||| | || ||||| ||||| |   | ||||| || ||||| || |||||||||||||||||||||     
T  16831456 gacatcaagagagccatagggtaccaacagataagaattttctctgatttggtaagtcgttgcaggatctatgaggaggacaccaaagctcattataagg 16831555  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||| | || ||||||||||| |||| || ||||||||| || ||||| |||||||| ||||| ||||||||  | |||||||||||||||||    
T  16831556 tgatgagtgagcgaagaggtaagggacagcagagtcatcctaagccgtatagtgcccctgctgataagggtaagcagagacttaatgatgagaggaggcc 16831655  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     || ||||| |||||||||| ||| || ||||||| |||||||||    
T  16831656 gaataggagagatgctcctgctgagatagtttgttttaagtgtgg 16831700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 18131275 - 18131519
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||||||||||||  |||| ||| | || |||||  |||| |  || || || || |||||||||||||| ||||||||||| ||      
T  18131275 gacatcaagagagccattgggtatcagaagataagaattttctctgatatggtgagtagctgtaggatatatgaagaagacactaaagctcattacaaag 18131374  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||  |||| ||||| ||||| |||| ||||||||| || || ||||||||||||||||| ||||| |||||  ||||| |||||||||||||    
T  18131375 tgatgagtgaacggagaggtaaaggacagcagagtcgtcctaaaccatatagtgctcctgctgacaaaggaaaacagagactgaataatgagaggaggcc 18131474  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| |||||||||||||| |||| ||| || ||||||||    
T  18131475 caagaggagagatgctcctgttgagattgattgctacaagtgtgg 18131519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 31692113 - 31692357
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||||||||||||  ||||||||  ||| ||||| ||||| |  || |||||||| ||||| || ||||| |||||||||||||||     
T  31692113 gacatcaagagagccattgggtatcagaagatcagaaacttctctgaattggtaagtagctgcagaatctatgaggaggacacgaaagctcattataagg 31692212  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||  | ||| | || ||||| |||| |||||| ||||| || ||||||||||||||||| || ||||||| | |||||||||||||||||||    
T  31692213 tgatgagtgatcgaaggagcaaaggacagcagagtcgtccgaagccgtatagtgctcctgctgacaaagggaagcagaagttgaatgatgagaggaggcc 31692312  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||| |||||  ||||| ||| ||| || |||||||| ||||||||    
T  31692313 caataggagaaatgcttctgctgagatcgtttgttacaagtgtgg 31692357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 31942104 - 31941860
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||||||||||||  ||||||||  ||| ||||| ||||| |  || |||||||| ||||| || ||||| |||||||||||||||     
T  31942104 gacatcaagagagccattgggtatcagaagatcagaaacttctctgaattggtaagtagctgcagaatctatgaggaggacacgaaagctcattataagg 31942005  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||  | ||| | || ||| | |||| |||||| ||||| || ||||||||||||||||| || ||||||| | |||||||||||||||||||    
T  31942004 tgatgagtgatcgaaggagcaaaggatagcagagtcgtccgaagccgtatagtgctcctgctgacaaagggaagcagaagttgaatgatgagaggaggcc 31941905  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||| |||||  ||||||||| ||| || |||||||| ||||||||    
T  31941904 caataggagaaatgctcctgctgagatcgtttgttacaagtgtgg 31941860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 77 - 258
Target Start/End: Complemental strand, 24190441 - 24190261
Alignment:
Q  77 agaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctg 176  Q
    ||||| |||||||| ||||| ||||||||||| ||| | |||| |||  | || || ||||  || |||| |||||| ||||| ||||||||||||||||    
T  24190441 agaatctatgaagaggacacgaaagctcattacaaggtgatgactgaccgcagaggcaaggc-cagcagagtcgtccgaagccgtacagtgctcctgctg 24190343  T
Q  177 acaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||||||||||  |||||||||||||||||  ||||||||| ||||||||||||||||||||||||| |||||||||    
T  24190342 acaagggaaagcagagattgaatgatgagaggaggtacaagaggagagatgctcctgttgatattgtttgttttaagtgtgg 24190261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 232
Target Start/End: Original strand, 14290463 - 14290678
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||| || ||||| |||||| |||| |||   |||||||| ||||  | ||| || ||||| |||||||| || |||||||||||||||||  | |    
T  14290463 atcaagagggctattggttatcaaaagataagaaatttttctgaattggaaagcagttgtagaatctatgaagaggataccaaagctcattataaagtga 14290562  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||| | || ||||||||||| |||| |||||| || || || ||||||||||||||||| || || |||||| ||||||||||||||||||| ||    
T  14290563 tgagtgagcgcagaggtaagggacagcagagtcgtccgaaaccgtatagtgctcctgctgacaaaggtaaacagaggctgaatgatgagaggaggcctaa 14290662  T
Q  217 gaggagggatgctcct 232  Q
    |||||| |||||||||    
T  14290663 gaggagagatgctcct 14290678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 258
Target Start/End: Original strand, 16825210 - 16825451
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||| || ||||| |||||  |||| |||  ||||||||||||||| | ||| || || || ||||||||||| || ||||||||||| ||| | |    
T  16825210 atcaagagggctattggttatcagaagataagaaacttttctgagttggtaagcagctgtaggatctatgaagaagatacgaaagctcattacaaggtga 16825309  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||| | || || |||||||| | || |||||| ||||| || ||||| ||| |||||||||| ||| ||||  |||| |||||||||||||||||    
T  16825310 tgagtgagcgcagaggcaagggacagctgagtcgtccgaagccgtatagtgcccctcctgacaagggtaagtagagattgaaagatgagaggaggcccaa 16825409  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    || ||| |||||||||  ||||||||||||||  ||||||||    
T  16825410 gatgagagatgctcctactgatattgtttgtttcaagtgtgg 16825451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 53 - 232
Target Start/End: Complemental strand, 35983343 - 35983164
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    |||||||| ||||| | ||| || ||||| |||||||| || |||||||||||||||||  | ||||||||| | || ||||||||||| |||| | |||    
T  35983343 ttttctgaattggtaagcagttgtagaatctatgaagaggataccaaagctcattataaagtgatgagtgagtgcagaggtaagggacagcagagttgtc 35983244  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcct 232  Q
    | || || || ||||||||||||||||| || || |||||| ||||||||||||||||||| |||||||| |||||||||    
T  35983243 cgaaaccgtatagtgctcctgctgacaaaggtaaacagaggctgaatgatgagaggaggcctaagaggagagatgctcct 35983164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 230
Target Start/End: Complemental strand, 17494848 - 17494631
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||||||||||||||| |||||  |||| |||  ||||||||||||||| | ||| || ||||| ||||| || || |||||||||||||| ||| | |    
T  17494848 atcaagagagccattggttatcagaagataagaaacttttctgagttggtaagcagctgtagaatctatgaggaggataccaaagctcattacaaggtga 17494749  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcct----gctgacaagggaaagcagaggatgaatgatgagaggaggc 212  Q
    |||||||| | || |  ||||||||||| | |||| | ||||| || |||||||||    ||||| ||||| ||||||||| | ||||||||||||||||    
T  17494748 tgagtgagcgcagagccaagggacaacaaagtcgttcgaagccatatagtgctcctgctggctgagaagggtaagcagaggttaaatgatgagaggaggc 17494649  T
Q  213 ccaagaggagggatgctc 230  Q
    |||||||||| |||||||    
T  17494648 ccaagaggagagatgctc 17494631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 232
Target Start/End: Complemental strand, 12181479 - 12181327
Alignment:
Q  80 atttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgaca 179  Q
    |||||||| || ||||| ||||||||||| ||| | ||||||||  | || || ||||||||||||| |||||  ||||| || ||||||||||||||||    
T  12181479 atttatgaggaggacacgaaagctcattacaaggtgatgagtgaacgaagaggcaagggacaacagagtcgtctgaagccgtatagtgctcctgctgaca 12181380  T
Q  180 agggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcct 232  Q
    |||| ||| ||||| | ||||||||||||||| |||||||||| |||||||||    
T  12181379 agggtaagtagaggttaaatgatgagaggaggaccaagaggagagatgctcct 12181327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 2036840 - 2037084
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||| |||||||| || || ||||| || ||||| || || ||||||||||| |||||||    
T  2036840 gacattaagagagctattgggtatcagcagatcagagtcttttccgagttggtgaatagctgcaggatatatgaggaggataccaaagctcactataaga 2036939  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga-caagggaaagcagaggatgaatgatgagaggaggc 212  Q
    |||  | |||| |||||   ||||| |||||   |||||| || || |||||||||||||   | |||||| || |||||  ||| |||||||||||| |    
T  2036940 ttagaaatgagcggaggaacaagggtcaacaaggtcgtccgaaaccctacagtgctcctgtaaaccaaggggaa-cagagattgactgatgagaggagac 2037038  T
Q  213 ccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    | |||||||| |||| ||||| ||| |||||||| || ||||||||    
T  2037039 ctaagaggagagatgatcctgctgagattgtttgctacaagtgtgg 2037084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 2040581 - 2040825
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||| |||||||| || || ||||| || ||||| || || ||||||||||| |||||||    
T  2040581 gacattaagagagctattgggtatcagcagatcagagtcttttccgagttggtgaatagctgcaggatatatgaggaggataccaaagctcactataaga 2040680  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga-caagggaaagcagaggatgaatgatgagaggaggc 212  Q
    |||  | |||| |||||   ||||| |||||   |||||| || || |||||||||||||   | |||||| || |||||  ||| |||||||||||| |    
T  2040681 ttagaaatgagcggaggaacaagggtcaacaaggtcgtccgaaaccctacagtgctcctgtaaaccaaggggaa-cagagattgactgatgagaggagac 2040779  T
Q  213 ccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    | |||||||| |||| ||||| ||| |||||||| || ||||||||    
T  2040780 ctaagaggagagatgatcctgctgagattgtttgctacaagtgtgg 2040825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 14039947 - 14039703
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||| |||||||| || || ||||| || ||||| || || ||||||||||| |||||||    
T  14039947 gacattaagagagctattgggtatcagcagatcagagtcttttccgagttggtgaatagctgcaggatatatgaggaggataccaaagctcactataaga 14039848  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga-caagggaaagcagaggatgaatgatgagaggaggc 212  Q
    |||  | |||| |||||   ||||| |||||   |||||| || || |||||||||||||   | |||||| || |||||  ||| |||||||||||| |    
T  14039847 ttagaaatgagcggaggaacaagggtcaacaaggtcgtccgaaaccctacagtgctcctgtaaaccaaggggaa-cagagattgactgatgagaggagac 14039749  T
Q  213 ccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    | |||||||| |||| ||||| ||| |||||||| || ||||||||    
T  14039748 ctaagaggagagatgatcctgctgagattgtttgctacaagtgtgg 14039703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 258
Target Start/End: Complemental strand, 13945224 - 13944981
Alignment:
Q  15 acatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagat 114  Q
    |||||||||||||||| || || |||||||| ||| | || ||||| ||||| |   | || || || || || || ||||||||||||||||||||| |    
T  13945224 acatcaagagagccataggataccaacagattagaattttctctgatttggtgagtcgctgtaggatctacgaggaggacaccaaagctcattataaggt 13945125  T
Q  115 tatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggccc 214  Q
     ||||||||| | || ||||||||||| |||||||||||||| || || ||||| ||  |||| ||||| ||||||||  | |||||||||||||||||     
T  13945124 gatgagtgagcgaagaggtaagggacatcagaatcgtcctaaaccgtatagtgccccgactgataagggtaagcagagacttaatgatgagaggaggccg 13945025  T
Q  215 aagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |  | |||||||||||||| ||| || || || | |||||||||    
T  13945024 agtaagagggatgctcctgctgagatagtgtgctttaagtgtgg 13944981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 258
Target Start/End: Complemental strand, 15230791 - 15230560
Alignment:
Q  27 ccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagag 126  Q
    ||||||| |||||  ||||||||   |||||||||||||  |  || || ||||| ||||| || || |||||||||||||||||| ||||||||||||     
T  15230791 ccattggttatcagaagatcagacaattttctgagttggggagtagctgtagaatctatgaggaggataccaaagctcattataaggttatgagtgagaa 15230692  T
Q  127 gaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggat 226  Q
    ||||   || || |||||   |||||||||||| || ||||||||||||||||| || ||||| ||  | ||||||||||||||||| ||||| |  |||    
T  15230691 gaggaacaaaggccaacaaggtcgtcctaagccctatagtgctcctgctgacaaagggaagcaaagattaaatgatgagaggaggcctaagagaaaagat 15230592  T
Q  227 gctcctgttgatattgtttgttataagtgtgg 258  Q
    | ||||| ||| |||||||| || ||||||||    
T  15230591 gttcctgctgagattgtttgctacaagtgtgg 15230560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 258
Target Start/End: Complemental strand, 15236659 - 15236428
Alignment:
Q  27 ccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagag 126  Q
    ||||||| |||||  ||||||||   |||||||||||||  |  || || ||||| ||||| || || |||||||||||||||||| ||||||||||||     
T  15236659 ccattggttatcagaagatcagacaattttctgagttggggagtagctgtagaatctatgaggaggataccaaagctcattataaggttatgagtgagaa 15236560  T
Q  127 gaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggat 226  Q
    ||||   || || |||||   |||||||||||| || ||||||||||||||||| || ||||| ||  | ||||||||||||||||| ||||| |  |||    
T  15236559 gaggaacaaaggccaacaaggtcgtcctaagccctatagtgctcctgctgacaaagggaagcaaagattaaatgatgagaggaggcctaagagaaaagat 15236460  T
Q  227 gctcctgttgatattgtttgttataagtgtgg 258  Q
    | ||||| ||| |||||||| || ||||||||    
T  15236459 gttcctgctgagattgtttgctacaagtgtgg 15236428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 23078962 - 23079138
Alignment:
Q  20 aagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatga 119  Q
    ||||| || ||| |||| ||||||||  |||| || || |||||||| ||||| ||||| ||||||||||| || ||||| |||||||| |||||| |||    
T  23078962 aagagggcaattaggtaccaacagattcgagttttctccgagttggtgaacagttgcaggatttatgaagaggataccaaggctcattacaagattgtga 23079061  T
Q  120 gtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatg 196  Q
     |||| ||| |  |||||| || |||| ||| ||||||||||| ||||| |||||||| |||||||| |||||||||    
T  23079062 atgagcggaagactaagggccagcagagtcgccctaagccttatagtgcccctgctgataagggaaaacagaggatg 23079138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 258
Target Start/End: Original strand, 8744396 - 8744562
Alignment:
Q  92 gacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcaga 191  Q
    ||||||||||||||||||||  | ||||||||| | || ||||||||||| |||||||||||||| || || ||||| ||  |||| ||||| |||||||    
T  8744396 gacaccaaagctcattataaagtgatgagtgagcgaagaggtaagggacatcagaatcgtcctaaaccgtatagtgccccgactgataagggtaagcaga 8744495  T
Q  192 ggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |  | ||||||||||||||||| |  | |||||||||||||| ||| || || || | |||||||||    
T  8744496 gacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgctttaagtgtgg 8744562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 215
Target Start/End: Original strand, 12508496 - 12508694
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||| |||||||| |||||  ||||| |   |||||||||  |||| | ||| |||||||| |||||  | || || ||||||||||| |||  ||    
T  12508496 atcaagagggccattggatatcagaagatctgtaacttttctgaactggtgagcagttgcagaatctatgagaaggatacgaaagctcattacaaggcta 12508595  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggccca 215  Q
    ||||||||||||  |||||| | || || | |||||| ||||||||||||||||| ||||| |||||  |||||||| |||||||||||| ||||||||    
T  12508596 tgagtgagaggaaaggtaagagtcagcaaagtcgtccaaagccttacagtgctccggctgataagggtgagcagagggtgaatgatgagaagaggccca 12508694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 5421872 - 5422038
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||||||||||||| | ||||| ||| | || ||||||||||| ||||| || ||||| || || ||||| ||||| || |||     
T  5421872 gacatcaagagggcgattgggtatcaacagctgagagtttttccagatttggttaacagctgcaggatctatgaggaggataccaaggctcactacaagg 5421971  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaa 180  Q
    |  |||  ||||||| ||| |||||||| |||| |||||||||||| |||||||| || ||||||||    
T  5421972 tagtgaacgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 5422038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 6597243 - 6597077
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || || |||||||||||| | ||||| ||| | || ||||||||||| ||||| || ||||| || || ||||| ||||| || |||     
T  6597243 gacatcaagagggcgatcgggtatcaacagctgagagtttttccagatttggttaacagctgcaggatctatgaggaggataccaaggctcactacaagg 6597144  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaa 180  Q
    |  ||| |||||||| ||| |||||||| |||| |||||||||||| |||||||| || ||||||||    
T  6597143 tagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 6597077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 13317638 - 13317741
Alignment:
Q  155 aagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagt 254  Q
    ||||| |||||||||||||||||||| ||||| || |   | ||||||||||||||||| | | |||| ||||||||||||||| |||||||||| ||||    
T  13317638 aagccctacagtgctcctgctgacaaaggaaaacaaatattaaatgatgagaggaggcctagggggagagatgctcctgttgatgttgtttgttacaagt 13317737  T
Q  255 gtgg 258  Q
    ||||    
T  13317738 gtgg 13317741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 15712998 - 15713213
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || |||||||| |||||  | ||||| ||| | || |||||||| || ||||| || |||||||| || || || ||||| || |||     
T  15712998 gacatcaagagggcgattgggtaccaacaactgagagtttttccggatttggttaatagctgcaggatctatgaagaggatacgaaggctcactacaagg 15713097  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    |  ||| |||||||| ||| |||||||| |||| |||||||||||| |||||||| || ||||| || || ||||||||||||   ||||| ||| ||||    
T  15713098 tagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgataaagggaagcagaggatggtcgatgataggcggcc 15713197  T
Q  214 caagaggagggatgct 229  Q
     |||| || |||||||    
T  15713198 taagaagaaggatgct 15713213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 16753643 - 16753809
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttct-gagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataag 112  Q
    ||||||||||| || ||||||||||||||| | ||||| |||||| || ||||||||||| ||||| || ||||| || || ||||| ||||| || |||    
T  16753643 gacatcaagagggcgattgggtatcaacagctgagagt-ttttctagatttggttaacagctgcaggatctatgaggaggataccaaggctcactacaag 16753741  T
Q  113 attatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaa 180  Q
     |  ||| |||||||| ||| |||||||| || | |||||||||||| |||||||| || ||||||||    
T  16753742 gtagtgaatgagaggaagggcaagggacagcatagtcgtcctaagccgtacagtgcccccgctgacaa 16753809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 6603923 - 6603757
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || || |||||||||||| | ||||| ||| | || ||||||||||| || || || ||||| || || ||||| ||||| || |||     
T  6603923 gacatcaagagggcgatcgggtatcaacagctgagagtttttccagatttggttaacagctgtaggatctatgaggaggataccaaggctcactacaagg 6603824  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaa 180  Q
    |  ||| |||||||| ||| |||||||| |||| |||||||||||| |||||||| || ||||||||    
T  6603823 tagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 6603757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 77 - 258
Target Start/End: Original strand, 12857487 - 12857668
Alignment:
Q  77 agaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctg 176  Q
    ||||| ||||| || || || ||||||||||||||| | ||||||||| | || || ||||||||  ||| |||||| || || || |||||||||||||    
T  12857487 agaatctatgaggaggatacaaaagctcattataaggtgatgagtgagcgtagaggcaagggacagtagagtcgtccaaaaccgtatagtgctcctgctg 12857586  T
Q  177 acaagggaaagcagagga-tgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||| || || || |||| ||||||||||||||||||| || ||||| |||||||||  ||| ||||| ||||  ||||||||    
T  12857587 acaaaggtaaaca-aggactgaatgatgagaggaggcctaaaaggagagatgctcctactgagattgtctgtttcaagtgtgg 12857668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 10008788 - 10008625
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || |||||||| |||||| | ||||| |||   || || ||||| || ||||| || |||||||| || || || ||||| || |||     
T  10008788 gacatcaagagggcgattgggtaccaacagctgagagtttttcaggacttagttaatagctgcaggatctatgaagaggatacgaaggctcactacaagg 10008689  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga 177  Q
    |  ||| |||||||| |||||||||||| |||| |||||||||||| |||||||| ||||||||    
T  10008688 tagtgaatgagaggaagggtaagggacagcagagtcgtcctaagccgtacagtgcccctgctga 10008625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 10909398 - 10909235
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || |||||||| |||||| | ||||| |||   || || ||||| || ||||| || |||||||| || || || ||||| || |||     
T  10909398 gacatcaagagggcgattgggtaccaacagcttagagtttttcaggacttagttaatagctgcaggatctatgaagaggatacgaaggctcactacaagg 10909299  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga 177  Q
    |  ||| |||||||| |||||||||||| |||| |||||||||||| |||||||| ||||||||    
T  10909298 tagtgaatgagaggaagggtaagggacagcagagtcgtcctaagccgtacagtgcccctgctga 10909235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 233
Target Start/End: Complemental strand, 11861520 - 11861325
Alignment:
Q  38 caacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagg 137  Q
    ||||||||| |||| ||| |||||||||| || || || ||||| ||||| ||||||||||| |||||||| ||| || ||| |||| ||| | ||||||    
T  11861520 caacagatctgagtttttcctgagttggtgaatagctgtagaatctatgaggaagacaccaaggctcattacaaggttgtgaatgagtggaagagtaagg 11861421  T
Q  138 gacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctg 233  Q
    | || |||| ||  |||||||| || ||||| |||||||| || || || ||||| |||   ||||| ||| |||| |||| || |||||||||||    
T  11861420 gccaccagagtcaccctaagccctatagtgcccctgctgataaaggcaaacagagaatggtcgatgataggcggcctaagaagaaggatgctcctg 11861325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 13255878 - 13255663
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || |||||||| |||||| | ||||| |||   || |||||||| || ||||| || || ||||| ||||| || ||||| || |||     
T  13255878 gacatcaagagggcgattgggtaccaacagctgagagtttttcaggacttggttaatagctgcaggatctacgaagaggacacgaaggctcactacaagg 13255779  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    |  ||| |||||||| ||| |||||||| |||| |||||||||||| |||||||| || |||||||| || || |||| ||||   ||||  ||| ||||    
T  13255778 tagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacagaagatggtcgatgttaggcggcc 13255679  T
Q  214 caagaggagggatgct 229  Q
     ||||||| |||||||    
T  13255678 taagaggaaggatgct 13255663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 168
Target Start/End: Original strand, 53381961 - 53382115
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||| ||||| || ||||||||||||||| | ||||| ||| | || ||||||||||| ||||| || |||||  | || ||||| ||||| || |||     
T  53381961 gacattaagagggcgattgggtatcaacagctgagagtttttccagatttggttaacagctgcaggatctatgagaaggataccaaggctcactacaagg 53382060  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgc 168  Q
    |  ||| |||||||| ||| |||||||| |||| |||||||||||| ||||||||    
T  53382061 tagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgc 53382115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 231
Target Start/End: Original strand, 16803910 - 16804103
Alignment:
Q  38 caacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagg 137  Q
    ||||||||| |||| ||| |||| |||||||| || |||||||||||||| || || ||||| |||||||| ||| || ||| |||| ||| |   ||||    
T  16803910 caacagatccgagtttttcctgatttggttaatagctgcagaatttatgaggaggataccaaggctcattacaaggttgtgaatgagcggaagaccaagg 16804009  T
Q  138 gacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcc 231  Q
    | || |||| ||| |||||||| || ||||| |||||||| ||||| || ||||| |||   ||||| ||| |||| |||| || |||||||||    
T  16804010 gccagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacagagaatggtcgatgataggcggcctaagaagaaggatgctcc 16804103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 192
Target Start/End: Original strand, 14578363 - 14578538
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||||||||| ||||| || ||  ||||| | | ||||||| || |||| | ||| ||||| |||||||| || || ||||| |||||||| ||||||     
T  14578363 atcaagagagcaattggttaccagaagatccgtgacttttctaagctggtgagcagttgcaggatttatgaggatgataccaaggctcattacaagattg 14578462  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagag 192  Q
    ||| |||| ||| ||  ||||| || ||||  |||||||||||||||| ||||||||| || ||||| || |||||    
T  14578463 tgaatgagcggaaggccaagggtcagcagagccgtcctaagccttacaatgctcctgccgataagggtaaacagag 14578538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 196
Target Start/End: Original strand, 14873527 - 14873706
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||| || ||||| || ||| ||||| |||| || ||||||||||| ||||| ||||| || ||||| || || ||||| |||||||| ||||||     
T  14873527 atcaagagggcaattggataccaatagatccgagttttctctgagttggtgaacagttgcaggatatatgaggaggataccaaggctcattacaagattg 14873626  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatg 196  Q
    ||| || | ||| |  |||||| ||||||| ||| |||||||| || | ||| | |||||| ||||| || |||||||||    
T  14873627 tgaatgtgcggaagactaagggccaacagagtcgccctaagccctataatgcccttgctgataagggcaaacagaggatg 14873706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 155 - 258
Target Start/End: Original strand, 15008653 - 15008756
Alignment:
Q  155 aagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagt 254  Q
    ||||| |||||||||| || |||||| ||| |||| ||  |||||||||||||||| || |||||||| |||| ||||| ||| |||||||| || ||||    
T  15008653 aagccctacagtgctcatgttgacaaaggagagcaaagattgaatgatgagaggagacctaagaggagagatgttcctgctgagattgtttgctacaagt 15008752  T
Q  255 gtgg 258  Q
    ||||    
T  15008753 gtgg 15008756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 52 - 243
Target Start/End: Complemental strand, 15262783 - 15262592
Alignment:
Q  52 cttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgt 151  Q
    |||||||||| |||| | ||| |||||||| ||||| || || || || |||||||| ||| || ||| |||| |||  || || |  ||||| | ||||    
T  15262783 cttttctgagctggtgagcagttgcagaatctatgaggaggatactaaggctcattacaaggttgtgaatgagcggaaaggcaaagatcaacaaagtcgt 15262684  T
Q  152 cctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgt 243  Q
    || ||||||||||  ||||||||||| ||||| || || || |||||||||||||||||||  |  ||||  |||||||||||||| |||||    
T  15262683 ccaaagccttacaacgctcctgctgataagggtaaacaaagaatgaatgatgagaggaggcgtagaaggaaagatgctcctgttgagattgt 15262592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 24186378 - 24186163
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||| ||||| || ||||| || |||||||| ||||| ||| | || ||||| || || ||||| || |||||||| || || || ||||| |||||||    
T  24186378 gacattaagagggcgattggataccaacagattagagtttttccagaattggtcaatagctgcaggatctatgaagaggatactaaggctcactataaga 24186279  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    || |||  ||| ||| ||| |||||||| |||| |||||||||||| |||||||| |  ||||| || || || |||||||||   ||||| ||| ||||    
T  24186278 ttgtgaacgagtggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccacgctgataaagggaaacagaggatggtcgatgataggcggcc 24186179  T
Q  214 caagaggagggatgct 229  Q
     |||| || |||||||    
T  24186178 taagaagaaggatgct 24186163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 16638961 - 16638795
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||| || |||||| | ||||| |||   || |||||||| || ||||| || ||||| || || ||||| ||||| || |||     
T  16638961 gacatcaagagggcgattggataccaacagctgagagtttttcaggacttggttaatagctgcaggatctatgaggaggataccaaggctcactacaagg 16638862  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaa 180  Q
    |  ||| |||||||| ||| |||||||| |||| |||||||||||| |||||||| || ||||||||    
T  16638861 tagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 16638795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 43165863 - 43165697
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||| || |||||| | ||||| |||   || |||||||| || ||||| || ||||| || || ||||| ||||| || |||     
T  43165863 gacatcaagagggcgattggataccaacagctgagagtttttcaggacttggttaatagctgcaggatctatgaggaggataccaaggctcactacaagg 43165764  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaa 180  Q
    |  ||| |||||||| ||| |||||||| |||| |||||||||||| |||||||| || ||||||||    
T  43165763 tagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 43165697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 243
Target Start/End: Original strand, 12843171 - 12843271
Alignment:
Q  143 cagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattg 242  Q
    |||| |||||| |||| ||| |||||||||||||| ||||| || ||||| |||| |||||||||| |||| | || ||  |||||||||||||| ||||    
T  12843171 cagagtcgtccaaagctttatagtgctcctgctgataagggcaaacagagaatgattgatgagaggcggcctaggaagaaagatgctcctgttgagattg 12843270  T
Q  243 t 243  Q
    |    
T  12843271 t 12843271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 249
Target Start/End: Original strand, 15012836 - 15012932
Alignment:
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgtta 249  Q
    |||||||||| | |||||| ||||| ||||| ||||||||| |||||| |||||| || ||||||| || |||| | ||| |||| |||||||||||    
T  15012836 ctaagccttataatgctccggctgataagggtaagcagagggtgaatgttgagagaagacccaagaagaaggatacacctattgaaattgtttgtta 15012932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 192
Target Start/End: Complemental strand, 15066256 - 15066084
Alignment:
Q  20 aagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatga 119  Q
    ||||| || ||||| || ||| ||||| |||| || || |||||||| ||||| || ||||||||||| ||||| ||||| |||||||| |||||  |||    
T  15066256 aagagggcaattggataccaatagatccgagttttctccgagttggtgaacagctgtagaatttatgaggaagataccaaggctcattacaagatggtga 15066157  T
Q  120 gtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagag 192  Q
     |||| ||| |  |||||| || |||| ||| |||||||| || ||| | |||||||| ||||| || |||||    
T  15066156 atgagcggaagactaagggccagcagagtcgccctaagccctatagttcccctgctgataagggcaaacagag 15066084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 213
Target Start/End: Complemental strand, 19727911 - 19727752
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    ||||||||| || ||| ||| |||||||| ||||| ||||| || || |||||||| ||| || ||| |||||| |  || ||||  || || | || ||    
T  19727911 ttttctgagctgattagcagttgcagaatatatgaggaagatactaaggctcattacaaggttgtgaatgagagaaaaggcaaggt-cagcaaagtcttc 19727813  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||||||||||||||||| ||||| || || ||  |||||||||||||||||||    
T  19727812 caaagccttacagtgctcctgctgataagggcaaacaaagattgaatgatgagaggaggcc 19727752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 3689024 - 3688949
Alignment:
Q  121 tgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatg 196  Q
    |||||||| ||| |||||||| |||| |||||||||||| |||||||| || ||||||||||| || |||| ||||    
T  3689024 tgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaagggtaaacagaagatg 3688949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 12889897 - 12889731
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||| || |||||| | ||||| |||   || |||||||| || ||||| || |||||||| || || || ||||| || |||     
T  12889897 gacatcaagagggcgattggataccaacagctgagagtttttcaggatttggttaatagctgcaggatctatgaagaggatacgaaggctcactacaagg 12889798  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaa 180  Q
    |  ||| ||| |||| ||| |||||||| |||| |||||||||||| |||||||| || ||||||||    
T  12889797 tagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 12889731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 221
Target Start/End: Original strand, 13028366 - 13028491
Alignment:
Q  95 accaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagagga 194  Q
    |||||||||||||  |||||  ||| ||||| |||| |||| || || |||| |||||| |||||||||||| |||||||||| ||| |  |||||||      
T  13028366 accaaagctcatttcaagatagtgaatgagaagaggagtaaaggccagcagagtcgtccaaagccttacagt-ctcctgctgataagagtgagcagagag 13028464  T
Q  195 tgaatgatgagaggaggcccaagagga 221  Q
    |||||||||||||| |  |||||||||    
T  13028465 tgaatgatgagaggggaaccaagagga 13028491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 180
Target Start/End: Complemental strand, 48428587 - 48428469
Alignment:
Q  62 ttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagcctt 161  Q
    ||||||||||| ||||| || ||||| || || ||||| ||||| || ||| |  ||| ||| |||| ||| |||||||| |||| |||||||||||| |    
T  48428587 ttggttaacagctgcaggatctatgaggaggataccaaggctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgt 48428488  T
Q  162 acagtgctcctgctgacaa 180  Q
    ||||||| || ||||||||    
T  48428487 acagtgcccccgctgacaa 48428469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 15359240 - 15359077
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||| || |||||| | ||||| |||   || ||||| || || ||||| || |||||||| || ||||| ||||| || ||||    
T  15359240 gacatcaagagggcgattggataccaacagcttagagtttttcaggatttggtcaatagctgcaggatctatgaagaggataccaaggctcactacaaga 15359141  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga 177  Q
    |  |||  ||||||| ||| |||||||| |||| ||| |||||||| |||||||| || |||||    
T  15359140 tagtgaacgagaggaagggcaagggacagcagagtcgccctaagccgtacagtgcccccgctga 15359077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 20058996 - 20059159
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||| ||||| || |||||||| |||||| | ||||| |||   || |||||||| || ||||| || || ||||| || || || ||||| || |||     
T  20058996 gacattaagagggcgattgggtaccaacagctgagagtttttcaggacttggttaatagctgcaggatctacgaagaggatacgaaggctcactacaagg 20059095  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga 177  Q
    |  ||| ||| |||| ||| |||||||| |||| |||||||||||| |||||||| ||||||||    
T  20059096 tagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctgctga 20059159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 2245612 - 2245716
Alignment:
Q  26 gccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgaga 125  Q
    |||||||| |||||  |||| |||  ||||||||||||||| |  || |  || |||||||| || || |||||||||||||||||| | |||||||||     
T  2245612 gccattggttatcagaagattagaaacttttctgagttggtgagtagctttaggatttatgaggatgataccaaagctcattataaggtgatgagtgagc 2245711  T
Q  126 ggagg 130  Q
    |||||    
T  2245712 ggagg 2245716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 229
Target Start/End: Original strand, 15586445 - 15586549
Alignment:
Q  125 aggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggaggg 224  Q
    |||| ||| ||||||||||| | |||||||||||| |||||||| || |||||||| || || |||| ||||   ||||  ||| |||| ||||||| ||    
T  15586445 aggaagggcaagggacaacaaagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacagaagatggtcgatgttaggcggcctaagaggaagg 15586544  T
Q  225 atgct 229  Q
    |||||    
T  15586545 atgct 15586549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 181; Significance: 7e-98; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 42336 - 42092
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| ||||| ||||||||||| ||||||| |||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  42336 gacatcaaaagagctattgggtatcagcagatcaaagtcttctctgagttggttaataggtgcagaatctatgaagaagacaccaaagctcattataaga 42237  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||  |||||| ||||||||    
T  42236 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgggtgatgataggaggcc 42137  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| |||||||||||||| |||||||| || ||||||||    
T  42136 caagaggagagatgctcctgttgagattgtttgctacaagtgtgg 42092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 181; Significance: 7e-98; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 40924504 - 40924748
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| ||||| ||||||||||| ||||||| |||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  40924504 gacatcaaaagagctattgggtatcagcagatcaaagtcttctctgagttggttaataggtgcagaatctatgaagaagacaccaaagctcattataaga 40924603  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||  |||||| ||||||||    
T  40924604 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgggtgatgataggaggcc 40924703  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| |||||||||||||| |||||||| || ||||||||    
T  40924704 caagaggagagatgctcctgttgagattgtttgctacaagtgtgg 40924748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 26115277 - 26115521
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||    
T  26115277 gacatcaagagagccattggatatcagcagatcagagtcttctctgagttggttaacaggtgtagaatctatgaagaagacaccaaagctcattacaaga 26115376  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||| ||||||||    
T  26115377 taatgagtgagaggaggggtaagggataacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgagtgatgataggaggcc 26115476  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| |||||||| | ||| ||||||||||| ||||||||    
T  26115477 caagaggagagatgctccggctgagattgtttgttacaagtgtgg 26115521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 49155863 - 49155619
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| ||||| ||||||||||| |||||||||||||| |||||||| ||||| || |||||||| |||||||||||||||||||||||||||||||    
T  49155863 gacatcaaaagagctattgggtatcagcagatcagagtcttctctgagttagttaatagatgcagaatctatgaagaagacaccaaagctcattataaga 49155764  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||| || ||||||||    
T  49155763 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaggatgggtgaggataggaggcc 49155664  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| |||||||||||||| |||||||| || ||||||||    
T  49155663 caagaggagagatgctcctgttgagattgtttgctacaagtgtgg 49155619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 26091485 - 26091729
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| ||||| ||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||    
T  26091485 gacatcaaaagagctattgggtatcagcagatcagagtcttctctgagttggttaataggtgcagaatctatgaagaagacaccaaagctcattacaaga 26091584  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||  |||||| ||||||||    
T  26091585 taatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgggtgatgataggaggcc 26091684  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| |||||||||||||| |||||||| || ||||||||    
T  26091685 caagaggagagatgctcctgttgagattgtttgctacaagtgtgg 26091729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 13 - 258
Target Start/End: Original strand, 13965354 - 13965599
Alignment:
Q  13 ggacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataag 112  Q
    ||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||  ||    
T  13965354 ggacatcaaaagagctattgggtatcagcagatcagagtcttttctgagttggttaacaggtgttggatttatgaagaagacaccaaagctcattaccag 13965453  T
Q  113 attatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggc 212  Q
    || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||  |||||| |||||||    
T  13965454 ataatgagtgagaggaggggtaagggacaacataatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgggtgatgataggaggc 13965553  T
Q  213 ccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||||||||| |||||||||| ||| |||| ||| || ||||||||    
T  13965554 ccaagaggagagatgctcctgctgagattgattgctacaagtgtgg 13965599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 21755974 - 21755730
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| ||||| ||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||    
T  21755974 gacatcaaaagagctattgggtatcagcagatcagagtcttctctgagttggttaacaggtgtagaatttatgaagaagacatcaaagctcattacaaga 21755875  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||  |||| |||||| | ||||||    
T  21755874 taatgagtgagaggaggggtaagggacaacaaaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaatatgagtgatgacatgaggcc 21755775  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     |||||||| ||||||||   ||| ||||||||||| ||||||||    
T  21755774 taagaggagagatgctccctctgagattgtttgttacaagtgtgg 21755730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 17 - 258
Target Start/End: Complemental strand, 13024903 - 13024662
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||| ||||| |||||||||||  |||| ||||| || ||||||||||| | ||| ||||| || ||||| |||||||||||||||||||| ||| | |    
T  13024903 atcaaaagagctattgggtatcagaagattagagttttctctgagttggtaagcagctgcaggatatatgaggaagacaccaaagctcattacaaggtga 13024804  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||    
T  13024803 tgagtgagaggaggggtaagggacagtagaatcgtcctaaaccttacagtgctcctgctgacaaagggaagcagaggatgaatgatgataggaggcccaa 13024704  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||||| |||||||||| ||| ||||||||||| ||||||||    
T  13024703 gaggagagatgctcctgctgaaattgtttgttacaagtgtgg 13024662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 17 - 258
Target Start/End: Complemental strand, 12460187 - 12459946
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||| || || ||||||||  |||| ||||| || ||||||||||| | ||| ||||| || ||||| |||||||| ||||||||||| ||| | |    
T  12460187 atcaagagggctatagggtatcagaagattagagttttctctgagttggtgagcagctgcaggatatatgaggaagacacaaaagctcattacaaggtga 12460088  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||||||||||||||  ||||||||||| |||||||||||    
T  12460087 tgagtgagaggaggggtaagggacagcagagtcgtcctaagccttacaatgctcttgctgacaagggaaagcagaaaatgaatgatgataggaggcccaa 12459988  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||||| |||| ||||| ||| ||||| ||||| ||||||||    
T  12459987 gaggagagatgttcctgctgagattgtctgttacaagtgtgg 12459946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 17 - 258
Target Start/End: Original strand, 16947162 - 16947403
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||| |||||||||||||||||  |||| ||| | || ||||| ||||| |  || |||||||| |||||||| || || ||||||||||| ||| | |    
T  16947162 atcaaaagagccattgggtatcagaagattagaattttctctgaattggtgagtagctgcagaatctatgaagaggatacgaaagctcattacaaggtga 16947261  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||||| |||||||||||||| |||| ||||||||| || |||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  16947262 tgagtgagagaaggggtaagggacagcagagtcgtcctaaaccatacagtgcccctgctgacaagggaaagcagagaatgaatgatgagagaaggcccaa 16947361  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||||| |||||||| ||||| ||||||||||| ||||||||    
T  16947362 gaggagagatgctccagttgaaattgtttgttacaagtgtgg 16947403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 17 - 258
Target Start/End: Original strand, 11385119 - 11385360
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||| |||||||| |||||  ||||||||   |||||||||||||| | ||| |||||||| ||||| |||||  | ||||||||||| ||||| |    
T  11385119 atcaagagggccattggctatcagaagatcagaactttttctgagttggtaagcagctgcagaatctatgaggaagattcaaaagctcattacaagatga 11385218  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||| ||||||||||||||||||||| || ||||||||| |||||||| ||||||||||||||||||||  |  ||||||||||||| ||||||||    
T  11385219 tgagtgagcggaggggtaagggacaacagagtcatcctaagccgtacagtgcccctgctgacaagggaaagcaacgactgaatgatgagagaaggcccaa 11385318  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||||| |||||||||| ||| || ||||| |||||||||||    
T  11385319 gaggagagatgctcctgctgagatagtttgctataagtgtgg 11385360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 258
Target Start/End: Original strand, 12798194 - 12798435
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||| || ||||| |||||  |||| |||  ||||||||||||||| | ||| || || ||||||||||| || || ||||||| ||| ||| | |    
T  12798194 atcaagagggctattggttatcagaagataagaaacttttctgagttggtaagcagctgtaggatttatgaagaggatacgaaagctctttacaaggtga 12798293  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||| | || || |||||||| |||| |||||| ||||| || |||||||||||||||||||| ||||||||  |||||||||||||||||| |||    
T  12798294 tgagtgagcgcagaggcaagggacagcagagtcgtccgaagccgtatagtgctcctgctgacaagggtaagcagagattgaatgatgagaggaggctcaa 12798393  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||||| ||||||| |  ||||||||||||||  ||||||||    
T  12798394 gaggagagatgctcatactgatattgtttgtttcaagtgtgg 12798435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 13677007 - 13676769
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||||||||||||  |||| ||| | || ||||| ||||| |  || ||||| || ||||||||||| || ||||||||||| |||     
T  13677007 gacatcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatatgaagaagatactaaagctcattacaagg 13676908  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||| ||      || |||||  |||| |||| || |||||| || || ||||||||||||||||| ||||| |||||| |||||||||||||||||||    
T  13676907 tgatgtgt------agaggtaaatgacagcagagtcatcctaaaccgtatagtgctcctgctgacaaaggaaaacagaggttgaatgatgagaggaggcc 13676814  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| |||||||||||||| |||||||| || ||||||||    
T  13676813 caagaggagagatgctcctgttgagattgtttgctacaagtgtgg 13676769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 254
Target Start/End: Complemental strand, 14145223 - 14144983
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||| || || |||||||| ||| | ||  |||| ||||| |   | ||||| || ||||| || | |||||||||||||||||||     
T  14145223 gacatcaagagagccataggataccaacagattagaattttccctgatttggtgagtcgttgcaggatctatgaggagggcaccaaagctcattataagg 14145124  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||| | || ||||||||||| |||| |||||||||||| |||||||| |||||||||||||| ||||||||  | |||||||||||||||||    
T  14145123 tgatgagtgagcgaagaggtaagggacagcagagtcgtcctaagccgtacagtgcccctgctgacaagggtaagcagagacttaatgatgagaggaggcc 14145024  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagt 254  Q
      | ||||| |||||||||| ||| || ||||||| |||||    
T  14145023 atataggagagatgctcctgctgagatagtttgttttaagt 14144983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 29 - 246
Target Start/End: Complemental strand, 19150558 - 19150341
Alignment:
Q  29 attgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagagga 128  Q
    ||||| |||||| |||| |||  |||||| || ||||| |  || ||||| || |||||||| || |||||||||||||| ||| | ||||||||| | |    
T  19150558 attggttatcaaaagataagaaacttttccgaattggtgagtagctgcaggatatatgaagaggataccaaagctcattacaaggtgatgagtgagcgca 19150459  T
Q  129 ggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgc 228  Q
      ||||||||||| |||| |||||| ||||| |  ||||| |||||||||||||| ||||||||| ||||||||||||||||||| |||||||| |||||    
T  19150458 taggtaagggacagcagagtcgtccgaagccgtttagtgcccctgctgacaagggtaagcagaggttgaatgatgagaggaggcctaagaggagagatgc 19150359  T
Q  229 tcctgttgatattgtttg 246  Q
    ||||  ||||||||||||    
T  19150358 tcctactgatattgtttg 19150341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 29 - 246
Target Start/End: Complemental strand, 20749957 - 20749740
Alignment:
Q  29 attgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagagga 128  Q
    ||||| |||||| |||| |||  |||||| || ||||| |  || ||||| || |||||||| || |||||||||||||| ||| | ||||||||| | |    
T  20749957 attggttatcaaaagataagaaacttttccgaattggtgagtagctgcaggatatatgaagaggataccaaagctcattacaaggtgatgagtgagcgca 20749858  T
Q  129 ggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgc 228  Q
      ||||||||||| |||| |||||| ||||| |  ||||| |||||||||||||| ||||||||| ||||||||||||||||||| |||||||| |||||    
T  20749857 taggtaagggacagcagagtcgtccgaagccgtttagtgcccctgctgacaagggtaagcagaggttgaatgatgagaggaggcctaagaggagagatgc 20749758  T
Q  229 tcctgttgatattgtttg 246  Q
    ||||  ||||||||||||    
T  20749757 tcctactgatattgtttg 20749740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 14283061 - 14283305
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||| ||| ||||| |||||||| ||| | || ||||| ||||| |   | ||||| || ||||| || ||||| ||||||||||| |||     
T  14283061 gacatcaagagagtcatagggtagcaacagattagaattttctctgatttggtaagtcgttgcaggatctatgaggaggacactaaagctcattacaagg 14283160  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||||| |||  ||||||||| |||| ||| || ||||| || ||||| |||||||| ||||| ||||||||  | |||||||||||||||||    
T  14283161 tgatgagtgagagaaggaataagggacagcagagtcgcccgaagccgtatagtgcccctgctgataagggtaagcagagactcaatgatgagaggaggcc 14283260  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |   ||||| |||||||||| |||  |||||||||| ||||||||    
T  14283261 cgttaggagagatgctcctgctgaggttgtttgttacaagtgtgg 14283305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 92 - 232
Target Start/End: Original strand, 15099368 - 15099508
Alignment:
Q  92 gacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcaga 191  Q
    ||||| ||||||||||| ||| | ||||||||| | || || |||||||| |||| |||||| | ||| || |||||||||||||||||||| |||||||    
T  15099368 gacacgaaagctcattacaaggtgatgagtgagcgtagaggcaagggacagcagagtcgtccgacgccgtatagtgctcctgctgacaagggtaagcaga 15099467  T
Q  192 ggatgaatgatgagaggaggcccaagaggagggatgctcct 232  Q
    || | ||||||| |||||||||||||||||| |||||||||    
T  15099468 ggttaaatgatgggaggaggcccaagaggagagatgctcct 15099508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 92 - 258
Target Start/End: Original strand, 18050718 - 18050884
Alignment:
Q  92 gacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcaga 191  Q
    ||||||||||||||||||||| | ||||||||| | || ||||||||||| |||||||||||||| || || ||||||||  |||| ||||| |||||||    
T  18050718 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacatcagaatcgtcctaaaccgtatagtgctccgactgataagggtaagcaga 18050817  T
Q  192 ggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |  | ||||||||||||||||| |  | |||||||||||||| ||| || || || | |||||||||    
T  18050818 gacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgctttaagtgtgg 18050884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 17 - 258
Target Start/End: Complemental strand, 13005024 - 13004783
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||| |||||||| |||||  |||||||  |  ||||||||||| | |  || |||||||| |||||||||||  | || |||||||| ||| | |    
T  13005024 atcaagagggccattggttatcagaagatcaggattctttctgagttgataagtagctgcagaatctatgaagaagattcaaaggctcattacaaggtga 13004925  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||  ||||||| ||||||||||||| |||||||||||| ||||| || ||||||| ||||||||||||  |  ||||||||||||| || |||||    
T  13004924 tgagtgaacggaggggcaagggacaacagagtcgtcctaagccgtacagcgcccctgctggcaagggaaagcaacgactgaatgatgagagaagacccaa 13004825  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    | | || ||  |||||| ||| || ||||| | |||||||||    
T  13004824 gggaagagacactcctgctgagatagtttgctttaagtgtgg 13004783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 74 - 258
Target Start/End: Original strand, 12712410 - 12712594
Alignment:
Q  74 tgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctg 173  Q
    |||||||| ||||| |||||  | || |||||||  ||| | ||||||||  ||||||| ||||||||||||| |||||||||||| |||||||||||||    
T  12712410 tgcagaatctatgaggaagattcaaaggctcattccaaggtgatgagtgaacggaggggcaagggacaacagagtcgtcctaagccgtacagtgctcctg 12712509  T
Q  174 ctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||  |||||||||||  |  ||||||||||||| || |||||| | || ||  |||||||||| || ||||| | |||||||||    
T  12712510 ctggtaagggaaagcaacgactgaatgatgagagaagacccaagggaagagacactcctgttgagatagtttgctttaagtgtgg 12712594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 11549814 - 11550029
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||| ||||| || ||||| || |||||| | ||||| ||| | || ||||| || || ||||| || |||||||| || || || ||||| |||||||    
T  11549814 gacattaagagggcgattggataccaacagcttagagtttttccagatttggtcaatagctgcaggatctatgaagaggatactaaggctcactataaga 11549913  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    || |||  ||||||| ||| ||||||||||||| |||||||||||| |||||||| |||||||| || || || |||||||||   ||||| ||| ||||    
T  11549914 ttgtgaacgagaggaaggggaagggacaacagagtcgtcctaagccgtacagtgcccctgctgataaagggaaacagaggatggtcgatgataggcggcc 11550013  T
Q  214 caagaggagggatgct 229  Q
     |||| || |||||||    
T  11550014 taagaagaaggatgct 11550029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 12691059 - 12690844
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||| ||||| || ||||| || |||||||| ||||| ||| | || ||||| || || ||||| || |||||||| || || || ||||| |||||||    
T  12691059 gacattaagagggcgattggataccaacagattagagtttttccagatttggtcaatagctgcaggatctatgaagaggatactaaggctcactataaga 12690960  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    || |||  ||||||| ||| |||||||| |||| |||||||||||| |||||||| |||||||| || || || |||||||||   ||||| ||| ||||    
T  12690959 ttgtgaacgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctgctgataaagggaaacagaggatggtcgatgataggcggcc 12690860  T
Q  214 caagaggagggatgct 229  Q
     |||| || |||||||    
T  12690859 taagaagaaggatgct 12690844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 10874019 - 10873853
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||||||||||||| | ||||| ||| | || ||||||||||| ||||| || ||||| || || ||||| ||||| || |||     
T  10874019 gacatcaagagggcgattgggtatcaacagctgagagtttttccagatttggttaacagctgcaggatctatgaggaggataccaaggctcactacaagg 10873920  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaa 180  Q
    |  ||| |||||||| ||| | |||||| |||| |||||||||||| |||||||| || ||||||||    
T  10873919 tagtgaatgagaggaagggcaggggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 10873853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 77 - 258
Target Start/End: Original strand, 12203550 - 12203731
Alignment:
Q  77 agaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctg 176  Q
    ||||| ||||| || || ||||||| |||||||||| |||||||||||| ||||   |  || || ||   |||||||||||| ||||||||||||||||    
T  12203550 agaatctatgaggaggataccaaagttcattataaggttatgagtgagaagaggaacagaggccagcaaggtcgtcctaagccctacagtgctcctgctg 12203649  T
Q  177 acaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||| || || || ||  |||||||||||||||| || |||||||| |||| ||||| ||  |||||||| || ||||||||    
T  12203650 acaaagggaaacaaagattgaatgatgagaggagacctaagaggagagatgttcctgctgtgattgtttgctacaagtgtgg 12203731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 56 - 232
Target Start/End: Original strand, 14260975 - 14261151
Alignment:
Q  56 tctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtccta 155  Q
    ||||||||||| |  || ||||| || |||||||| || || ||||||||||| ||| | || |||||| | |  |||||||||||  ||| |||||| |    
T  14260975 tctgagttggtgagtagctgcaggatatatgaagaggatacgaaagctcattacaaggtgatcagtgagcgcaaaggtaagggacagtagagtcgtccga 14261074  T
Q  156 agccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcct 232  Q
    |||| || ||||| |||||||||||||| ||| ||||  ||||||||||||||||||| ||| ||||  ||||||||    
T  14261075 agccgtatagtgcccctgctgacaagggtaagtagagactgaatgatgagaggaggcctaaggggagatatgctcct 14261151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 98 - 213
Target Start/End: Complemental strand, 15628001 - 15627886
Alignment:
Q  98 aaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatga 197  Q
    ||||||||||| ||| |||||| ||||||||   ||||| | ||||| | |||||| ||||||||||||||||||||||| ||||| || || ||| |||    
T  15628001 aaagctcattacaaggttatgaatgagaggaaaagtaagagtcaacaaagtcgtccaaagccttacagtgctcctgctgataagggtaaacaaagggtga 15627902  T
Q  198 atgatgagaggaggcc 213  Q
    ||||||||| ||||||    
T  15627901 atgatgagaagaggcc 15627886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 233
Target Start/End: Complemental strand, 9591901 - 9591706
Alignment:
Q  38 caacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagg 137  Q
    ||||||||| |||| ||| |||| ||||| || || |||||||| ||||| || || |||| ||||||||| ||| || | | |||||||| |   ||||    
T  9591901 caacagatccgagtttttcctgatttggtgaatagctgcagaatctatgaggaggataccagagctcattacaaggttgttaatgagaggaagaccaagg 9591802  T
Q  138 gacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctg 233  Q
    | || |||| ||| ||||||||||| ||||| |||| ||| ||||| |||||||| |||  |||||| ||| |||| |||| || |||||||||||    
T  9591801 gccagcagagtcgccctaagccttatagtgcccctgttgataagggcaagcagagaatggttgatgataggcggcctaagaagaaggatgctcctg 9591706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 13689599 - 13689436
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||||||||||||| | ||||| ||| | || |||||||| || ||||| || |||||||| || || || ||||| || |||     
T  13689599 gacatcaagagggcgattgggtatcaacagctgagagtttttccagacttggttaatagctgcaggatctatgaagaggatacgaaggctcactacaagg 13689500  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga 177  Q
    |  ||| |||||| | ||| |||||||| |||| |||||||||||| |||||||| ||| ||||    
T  13689499 tagtgaatgagagaaagggcaagggacaccagagtcgtcctaagccgtacagtgcccctactga 13689436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 196
Target Start/End: Complemental strand, 14958051 - 14957884
Alignment:
Q  29 attgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagagga 128  Q
    ||||| || |||||||| ||||| ||| | || ||||| || || ||||| || |||||||| || || || ||||| ||||||||| |||  |||||||    
T  14958051 attggataccaacagattagagtttttccagatttggtcaatagctgcaggatctatgaagaggatactaaggctcactataagattgtgaacgagagga 14957952  T
Q  129 ggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatg 196  Q
     ||| ||||||||  ||  |||||||||||| |||||||| |||||||| || || || |||||||||    
T  14957951 agggcaagggacagtagggtcgtcctaagccgtacagtgcccctgctgataaagggaaacagaggatg 14957884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 15157769 - 15157932
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||| || |||||| | ||||| |||   || |||||||| || ||||| || |||||||| || || || ||||| || |||     
T  15157769 gacatcaagagggcgattggataccaacagctgagagtttttcaggatttggttaatagctgcaggatctatgaagaggatacgaaggctcactacaagg 15157868  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga 177  Q
    |  ||| |||||| | ||| |||||||| |||| |||||||||||| |||||||| ||||||||    
T  15157869 tagtgaatgagagaaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctgctga 15157932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 177
Target Start/End: Complemental strand, 18181253 - 18181138
Alignment:
Q  62 ttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagcctt 161  Q
    |||||||| || ||||| || |||||||| || || || ||||| || ||| |  ||| |||||||| ||||||||||||||||| || ||||||||| |    
T  18181253 ttggttaatagctgcaggatctatgaagaggatacgaaggctcactacaaggtagtgaatgagaggaagggtaagggacaacagagtcttcctaagccgt 18181154  T
Q  162 acagtgctcctgctga 177  Q
    ||||||| || |||||    
T  18181153 acagtgcccccgctga 18181138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 229
Target Start/End: Original strand, 11234032 - 11234140
Alignment:
Q  121 tgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagagg 220  Q
    |||||||| ||| |||||||| |||| |||||||||||| |||||||| || ||||| || || || |||||||||   ||||| ||| |||| |||| |    
T  11234032 tgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgataaagggaaacagaggatggtcgatgataggcggcctaagaag 11234131  T
Q  221 agggatgct 229  Q
    | |||||||    
T  11234132 aaggatgct 11234140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 208
Target Start/End: Complemental strand, 14043217 - 14043062
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    ||||||||  |||| | ||| ||||| |||||||| || || || || |||||||| |||||| ||| |||| |||  |  || || ||||||| | |||    
T  14043217 ttttctgatctggtgagcagttgcaggatttatgaggaggatactaaggctcattacaagattgtgaatgagcggaaagtcaaaggtcaacagagttgtc 14043118  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagagg 208  Q
    | |||||||| |||||||||||||| ||||| || ||||| |||  ||||||||||    
T  14043117 caaagccttatagtgctcctgctgataagggtaaacagagaatggttgatgagagg 14043062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 208
Target Start/End: Complemental strand, 14353247 - 14353092
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    ||||||||  |||| | ||| ||||| |||||||| || || || || |||||||| |||||| ||| |||| |||  |  || || ||||||| | |||    
T  14353247 ttttctgatctggtgagcagttgcaggatttatgaggaggatactaaggctcattacaagattgtgaatgagcggaaagtcaaaggtcaacagagttgtc 14353148  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagagg 208  Q
    | |||||||| |||||||||||||| ||||| || ||||| |||  ||||||||||    
T  14353147 caaagccttatagtgctcctgctgataagggtaaacagagaatggttgatgagagg 14353092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 192
Target Start/End: Complemental strand, 11984529 - 11984375
Alignment:
Q  38 caacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagg 137  Q
    ||||| ||| |||| ||| |||| ||||||||||| || || || || |||||||| ||||| |||||||| ||| || ||| |||| ||| |   ||||    
T  11984529 caacaaatccgagtttttcctgatttggttaacagttgtaggatctacgaagaagataccaaggctcattacaaggttgtgaatgagcggaagaccaagg 11984430  T
Q  138 gacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagag 192  Q
    | || |||| ||| |||||||| || ||||| |||||||| ||||| || |||||    
T  11984429 gccagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacagag 11984375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 248
Target Start/End: Original strand, 17703212 - 17703398
Alignment:
Q  62 ttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagcctt 161  Q
    ||||| ||||| || || || |||||||| || |||| ||||||||| ||| || ||| |||| ||| |   ||||| || |||| ||| ||||| ||||    
T  17703212 ttggtgaacagctgtaggatctatgaagaggataccagagctcattacaaggttgtgaatgagcggaagaccaagggccagcagagtcgccctaaacctt 17703311  T
Q  162 acagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgtt 248  Q
    | ||||| ||| |||| ||||| || ||||| |||   ||||| ||| |||| |||| || |||||||||||  |||||||||||||    
T  17703312 atagtgcccctactgataagggcaaacagagaatggtcgatgataggcggccaaagaagaaggatgctcctgcggatattgtttgtt 17703398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 196
Target Start/End: Original strand, 44788111 - 44788245
Alignment:
Q  62 ttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagcctt 161  Q
    |||||||| || ||||| || ||||| || || ||||| ||||| || ||| |  ||| ||| |||| ||| |||||||| |||| |||||||||||| |    
T  44788111 ttggttaatagctgcaggatctatgaggaggataccaaggctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgt 44788210  T
Q  162 acagtgctcctgctgacaagggaaagcagaggatg 196  Q
    ||||||| ||| |||| || ||||| |||| ||||    
T  44788211 acagtgcccctactgataaaggaaaacagaagatg 44788245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 192
Target Start/End: Original strand, 15145669 - 15145810
Alignment:
Q  51 tcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcg 150  Q
    |||||| |||| |||| | ||| ||||| || | ||| ||||| |||||  ||||||| |||||| ||| |||| | | ||  ||||| ||||||| |||    
T  15145669 tcttttatgagctggtgagcagttgcaggatctttgaggaagataccaagactcattacaagattgtgaatgagcgaaaggccaagggtcaacagagtcg 15145768  T
Q  151 tcctaagccttacagtgctcctgctgacaagggaaagcagag 192  Q
    |||||||||||| ||| | |||||||| ||||| || |||||    
T  15145769 tcctaagccttatagtccccctgctgataagggcaaacagag 15145810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 23626 - 23870
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| ||||| ||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||    
T  23626 gacatcaaaagagctattgggtatcagcagatcagagtcttctctgagttggttaataggtgcagaatctatgaagaagacaccaaaactcattataaga 23725  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||  |||||| ||||||||    
T  23726 ttatgagtgagaggaggggtaagggacaacagagtcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgggtgatgataggaggcc 23825  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| |||||||||||||| |||||||| || ||||||||    
T  23826 caagaggagagatgctcctgttgagattgtttgatacaagtgtgg 23870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 177; Significance: 2e-95; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 14883873 - 14884117
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| || || ||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  14883873 gacatcaaaagggctattgggtatcagcagatcagagtcttctctgagttggttaataggtgcagaatctatgaagaagacaccaaagctcattataaga 14883972  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||  |||||| ||||||||    
T  14883973 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctactgacaaaggaaagcagaggatgggtgatgataggaggcc 14884072  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| |||||||| | ||| ||||||||||| ||||||||    
T  14884073 caagaggagagatgctccagctgagattgtttgttacaagtgtgg 14884117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 22506165 - 22505921
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| ||||| ||||| ||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22506165 gacatcaaaagagctattggatatcagcaaatcagagtcttctctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 22506066  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||    
T  22506065 taatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgaatgatgataggaggcc 22505966  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     |||||||| |||||||||  ||| ||||||||||| ||||||||    
T  22505965 taagaggagagatgctccttctgagattgtttgttacaagtgtgg 22505921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 20345768 - 20345524
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| ||||    
T  20345768 gacatcaaaagagctattgggtatcagcagatcagagtcttttctgagttggttaataggtgcagaatttatgaggaagacaccaaagctcattacaaga 20345669  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||| |||||||||| ||||  |||||| ||||||||    
T  20345668 taatgagtgagaggaggggtaagggacagtagaatcgtcctaagccttatagtgctcctgctgacaaaggaaagcagaagatgggtgatgataggaggcc 20345569  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| |||||||||| ||| ||||||||||| ||||||||    
T  20345568 caagaggagagatgctcctgctgagattgtttgttacaagtgtgg 20345524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 25851558 - 25851314
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| ||||| ||||||||||| ||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  25851558 gacatcaaaagagctattgggtatcagcagatcagagttttctctgagttggttaataggtgcagaatttatgaagaagacaccaaagctcattacaaga 25851459  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||  |||||| ||||||||    
T  25851458 taatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgggtgatgataggaggcc 25851359  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| ||||||| |||||| |||||||| || ||||||||    
T  25851358 caagaggagagatgctcttgttgagattgtttgctacaagtgtgg 25851314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 17 - 258
Target Start/End: Original strand, 23077790 - 23078031
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||| ||||| |||||||||||  |||| ||| | || ||||||||||| | ||| ||||| || ||||| |||||||||||||||||||| ||| | |    
T  23077790 atcaaaagagctattgggtatcagaagattagaattttctctgagttggtaagcagctgcaggatatatgaggaagacaccaaagctcattacaaggtaa 23077889  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    ||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||| || ||||||| |||||||||||| |||||||||||    
T  23077890 tgagtgagaggaggggtaagggacagcagagtcgtcctaaaccttacagtgctcctgctgacaaagggaagcagaagatgaatgatgataggaggcccaa 23077989  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||||| |||||||||| ||| ||||| ||||  ||||||||    
T  23077990 gaggagagatgctcctgctgagattgtatgtttcaagtgtgg 23078031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 53 - 215
Target Start/End: Complemental strand, 21410599 - 21410437
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    |||| ||||||||| |  || ||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||   ||||| | ||||     
T  21410599 ttttttgagttggtgagtagctgcagaatttatgaagatgacaccaaagctcattataagattatgaatgagcggaggggtaagcaccaacaaagtcgtg 21410500  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggccca 215  Q
     ||| |||||||||||||| ||||| ||||| ||||| ||| |||||||| ||||||||||||    
T  21410499 gtaaaccttacagtgctccagctgataagggtaagcatagggtgaatgataagaggaggccca 21410437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 232
Target Start/End: Original strand, 21870163 - 21870378
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||| || ||||| |||||| |||| ||   ||||||||| ||||| |  || ||||| || |||||||| || |||||||||||||| ||| | |    
T  21870163 atcaagagggctattggctatcaaaagataaggaacttttctgaattggtaagtagctgcaggatatatgaagaggataccaaagctcattacaaggtga 21870262  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||| | || || |||||||| |||| |||||| ||||| || ||||| |||||||||||||| |||||||   ||||||||| ||||||||| ||    
T  21870263 tgagtgagcgtagaggcaagggacagcagagtcgtccgaagccgtatagtgcccctgctgacaagggtaagcagaaattgaatgatgggaggaggcctaa 21870362  T
Q  217 gaggagggatgctcct 232  Q
    |||||| |||||||||    
T  21870363 gaggagagatgctcct 21870378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 232
Target Start/End: Original strand, 21874443 - 21874658
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||| || ||||| |||||| |||| ||   ||||||||| ||||| |  || ||||| || |||||||| || |||||||||||||| ||| | |    
T  21874443 atcaagagggctattggctatcaaaagataaggaacttttctgaattggtaagtagctgcaggatatatgaagaggataccaaagctcattacaaggtga 21874542  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||| | || || |||||||| |||| |||||| ||||| || ||||| |||||||||||||| |||||||   ||||||||| ||||||||| ||    
T  21874543 tgagtgagcgtagaggcaagggacagcagagtcgtccgaagccgtatagtgcccctgctgacaagggtaagcagaaattgaatgatgggaggaggcctaa 21874642  T
Q  217 gaggagggatgctcct 232  Q
    |||||| |||||||||    
T  21874643 gaggagagatgctcct 21874658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 16257918 - 16258162
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||| |||||||| || || ||||| || ||||| || || ||||||||||| |||||||    
T  16257918 gacattaagagagctattgggtatcagcagatcagagtcttttccgagttggtgaatagctgcaggatatatgaggaggataccaaagctcactataaga 16258017  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga-caagggaaagcagaggatgaatgatgagaggaggc 212  Q
    ||| || |||| |||||   ||||| |||||   |||||| || || |||||||||||||   | |||||| || |||||  ||| |||||||||||| |    
T  16258018 ttaggaatgagcggaggaacaagggtcaacaaggtcgtccgaaaccctacagtgctcctgtaaaccaaggggaa-cagagattgactgatgagaggagac 16258116  T
Q  213 ccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    | |||||||| |||| ||||| ||| |||||||| || ||||||||    
T  16258117 ctaagaggagagatgatcctgctgagattgtttgctacaagtgtgg 16258162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 22591637 - 22591881
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||| |||||||| || || ||||| || ||||| || || ||||||||||| |||||||    
T  22591637 gacattaagagagctattgggtatcagcagatcagagtcttttccgagttggtgaatagctgcaggatatatgaggaggataccaaagctcactataaga 22591736  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga-caagggaaagcagaggatgaatgatgagaggaggc 212  Q
    ||| || |||| |||||   ||||| |||||   |||||| || || |||||||||||||   | |||||| || |||||  ||| |||||||||||| |    
T  22591737 ttaggaatgagcggaggaacaagggtcaacaaggtcgtccgaaaccctacagtgctcctgtaaaccaaggggaa-cagagattgactgatgagaggagac 22591835  T
Q  213 ccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    | |||||||| |||| ||||| ||| |||||||| || ||||||||    
T  22591836 ctaagaggagagatgatcctgctgagattgtttgctacaagtgtgg 22591881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 22595192 - 22595436
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||| |||||||| || || ||||| || ||||| || || ||||||||||| |||||||    
T  22595192 gacattaagagagctattgggtatcagcagatcagagtcttttccgagttggtgaatagctgcaggatatatgaggaggataccaaagctcactataaga 22595291  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga-caagggaaagcagaggatgaatgatgagaggaggc 212  Q
    ||| || |||| |||||   ||||| |||||   |||||| || || |||||||||||||   | |||||| || |||||  ||| |||||||||||| |    
T  22595292 ttaggaatgagcggaggaacaagggtcaacaaggtcgtccgaaaccctacagtgctcctgtaaaccaaggggaa-cagagattgactgatgagaggagac 22595390  T
Q  213 ccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    | |||||||| |||| ||||| ||| |||||||| || ||||||||    
T  22595391 ctaagaggagagatgatcctgctgagattgtttgctacaagtgtgg 22595436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 74 - 246
Target Start/End: Original strand, 23563110 - 23563282
Alignment:
Q  74 tgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctg 173  Q
    ||||| |||||||| || ||||| ||||||||||| ||||| ||||||||  | || |||||||||||  ||| | |||| ||||| || ||||||||||    
T  23563110 tgcaggatttatgaggaggacactaaagctcattacaagatgatgagtgaacgtagaggtaagggacagaagagttgtccgaagccgtatagtgctcctg 23563209  T
Q  174 ctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttg 246  Q
    |||| ||||  ||||||||| | ||| |||||||||||||||||||||| |||||||||  ||| ||||||||    
T  23563210 ctgaaaaggataagcagaggttaaataatgagaggaggcccaagaggagagatgctcctactgacattgtttg 23563282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 92 - 258
Target Start/End: Original strand, 17266294 - 17266460
Alignment:
Q  92 gacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcaga 191  Q
    ||||||||||||||||||||| | ||||||||| | || ||||| || || |||| ||||||||| || || ||||| |||||||||||||| |||||||    
T  17266294 gacaccaaagctcattataaggtgatgagtgagcgaagaggtaaagggcatcagagtcgtcctaaaccgtatagtgcccctgctgacaagggtaagcaga 17266393  T
Q  192 ggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |  | ||||||||||||||||| |  | |||||||||||||| ||| || || |||| |||||||||    
T  17266394 gacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgttttaagtgtgg 17266460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 258
Target Start/End: Original strand, 21983073 - 21983303
Alignment:
Q  28 cattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagagg 127  Q
    |||||| |||||| ||||||||   |||||||| || || | ||| || ||||||||||| || || || ||||||||||||||| ||||||||||| ||    
T  21983073 cattggttatcaaaagatcagaaaattttctgaatttgtgagcagctgtagaatttatgaggaggatacgaaagctcattataagtttatgagtgagcgg 21983172  T
Q  128 aggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatg 227  Q
    |||   || || || ||   |||||| ||||| ||||||| |||||||||||| || ||||| ||  |||||||||||||||| || ||||| || ||||    
T  21983173 aggaacaaaggtcagcaaggtcgtccgaagccctacagtgttcctgctgacaaagggaagcaaagattgaatgatgagaggagacctaagagaagagatg 21983272  T
Q  228 ctcctgttgatattgtttgttataagtgtgg 258  Q
     ||||| ||| |||||||| |||| ||||||    
T  21983273 ttcctgctgagattgtttgctataggtgtgg 21983303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 52 - 215
Target Start/End: Complemental strand, 23474660 - 23474497
Alignment:
Q  52 cttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgt 151  Q
    ||||||||||||||| | ||| ||||||||  |||| ||||| || || |||||||| ||| || ||| ||||||||  || ||||| || || | ||||    
T  23474660 cttttctgagttggtgagcagctgcagaatacatgaggaagatactaaggctcattacaaggttgtgaatgagaggaaaggcaagggtcagcaaagtcgt 23474561  T
Q  152 cctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggccca 215  Q
    || |||||||||| |||||||||||| ||||| ||||| ||  |||||||||||||||||||||    
T  23474560 ccaaagccttacattgctcctgctgataagggtaagcaaagattgaatgatgagaggaggccca 23474497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 74 - 213
Target Start/End: Original strand, 21631341 - 21631480
Alignment:
Q  74 tgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctg 173  Q
    |||||||| ||||| ||||| || ||||||||||| ||| || ||| |||||||| ||||| | | || || | |||||| |||||||||||||||||||    
T  21631341 tgcagaatctatgaggaagatacgaaagctcattacaaggttgtgaatgagaggaagggtaggagtcagcaaagtcgtccaaagccttacagtgctcctg 21631440  T
Q  174 ctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    |||| ||||| || || ||| ||||||||| |||||||||    
T  21631441 ctgataagggtaaacaaagggtgaatgatgtgaggaggcc 21631480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 17 - 196
Target Start/End: Complemental strand, 23526552 - 23526373
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||||||||| ||||| || ||||||||| |||| || || |||||||| ||||| ||||| |||||||| || ||||| || |||||||| ||||||     
T  23526552 atcaagagagcaattggataccaacagatccgagttttctccgagttggtgaacagttgcaggatttatgaggaggacacaaaggctcattacaagattg 23526453  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatg 196  Q
    ||| |||| ||| |  |||||| || |||| |||  ||||||| || ||||||| |||||||||||| ||  ||||||||    
T  23526452 tgaatgagtggaagactaagggccagcagagtcgcactaagccctatagtgctcttgctgacaagggcaaatagaggatg 23526373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 22138169 - 22138006
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||| || |||||| | ||||| |||   || ||||| || || ||||| || ||||||||||| || || ||||| |||||||    
T  22138169 gacatcaagagggcgattggataccaacagcttagagtttttcaggatttggtcaatagctgcaggatctatgaagaagatactaaggctcactataaga 22138070  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga 177  Q
    || |||  ||||||| ||| |||||||| |||| |||||||||||| |||||||| ||||||||    
T  22138069 ttgtgaacgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctgctga 22138006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 180
Target Start/End: Complemental strand, 27521859 - 27521741
Alignment:
Q  62 ttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagcctt 161  Q
    |||||||| || ||||| || |||||||| ||||| || ||||| || ||| |  ||| |||||||| |||||||||||| |||| |||||||||||| |    
T  27521859 ttggttaatagctgcaggatctatgaagaggacacgaaggctcactacaaggtagtgaatgagaggaagggtaagggacagcagagtcgtcctaagccgt 27521760  T
Q  162 acagtgctcctgctgacaa 180  Q
    ||||||| |||||||||||    
T  27521759 acagtgcccctgctgacaa 27521741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 213
Target Start/End: Original strand, 21331910 - 21332070
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    ||||||||| |||| | ||| ||||| |||||||| || || || || |||||||| | |||| ||| ||||||||  || || || || |||| |||||    
T  21331910 ttttctgagctggtgagcagttgcaggatttatgaggaggatactaaggctcattacaggattgtgaatgagaggaaaggcaaaggtcagcagagtcgtc 21332009  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||||||||||||||||| |||||||| || ||  | ||||||||||| |||||    
T  21332010 caaagccttacagtgctcctgctgataagggaaaacaaagagttaatgatgagagaaggcc 21332070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 21560919 - 21561139
Alignment:
Q  26 gccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgaga 125  Q
    |||||||| |||||| |||||||    |||||| | ||||| | ||| || ||||||||||| || || || ||||| | ||||||| ||||||||||||    
T  21560919 gccattggttatcaaaagatcaggtaattttctaaattggtgagcagctgtagaatttatgaggaggatacgaaagcccgttataaggttatgagtgaga 21561018  T
Q  126 ggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggaggga 225  Q
    |||||   || || || ||   |||||| ||||| ||||||||| |||||||||| || || || ||  |||||||||||||||| || ||||| || ||    
T  21561019 ggaggaacaaaggtcagcaaggtcgtccgaagccctacagtgctactgctgacaaagggaaacaaagattgaatgatgagaggagacctaagagaagaga 21561118  T
Q  226 tgctcctgttgatattgtttg 246  Q
    || ||||| ||| ||||||||    
T  21561119 tgttcctgctgagattgtttg 21561139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 246
Target Start/End: Original strand, 26735646 - 26735842
Alignment:
Q  50 gtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatc 149  Q
    |||||||||||| |||| | ||| |||||||||||||| || || || || |||||||| |||||| | | |||| |||  |  || || || |||| ||    
T  26735646 gtcttttctgagctggtgagcagttgcagaatttatgaggaggatactaaggctcattacaagattgtaaatgagcggaaagtcaaaggtcagcagagtc 26735745  T
Q  150 gtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttg 246  Q
    |||| |||||||||||||||||| |||| || ||||| || ||  | ||||||||||||||||| |  | ||  |||||||||||||| ||||||||    
T  26735746 gtccaaagccttacagtgctcctactgataaaggaaaacaaagagttaatgatgagaggaggcctagaaagaaagatgctcctgttgagattgtttg 26735842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 14996624 - 14996787
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||||||||||||| | ||||| ||| | || |||||||| || ||||| || |||||||| || || || ||||| ||  ||     
T  14996624 gacatcaagagggcgattgggtatcaacagttgagagtttttccagacttggttaatagctgcaggatctatgaagaggatacgaaggctcactacgagg 14996723  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga 177  Q
    |  ||| |||||| | ||| |||||||| |||| |||||||||||| |||||||| ||||||||    
T  14996724 tagtgaatgagagaaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctgctga 14996787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 22329772 - 22329935
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || |||||||| |||||| | ||||| ||| | || ||||| || || ||||| || |||||||| || || || ||||| || |||     
T  22329772 gacatcaagagggcaattgggtaccaacagctgagagtttttccagatttggtcaatagctgcaggatctatgaagaggatacgaaggctcactacaagg 22329871  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga 177  Q
    |  ||| |||||||| ||| |||||||| |||| |||||||||||| |||||||| ||||||||    
T  22329872 tagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctgctga 22329935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 29472958 - 29473173
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || |||||||| |||||| | ||||| ||| | || |||||||| || ||||| || |||||||| || || || ||||| || |||     
T  29472958 gacatcaagagggcgattgggtaccaacagctaagagtttttccggatttggttaatagctgcaggatctatgaagaggatacgaatgctcactacaagg 29473057  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    |  ||| |||||||| ||| |||||||| |||| |||||||||||| |||||||  || ||||| || || || |||||||||   ||||| ||| ||||    
T  29473058 tagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgtccccgctgataaagggaaacagaggatggtcgatgataggcggcc 29473157  T
Q  214 caagaggagggatgct 229  Q
     |||| || |||||||    
T  29473158 taagaagaaggatgct 29473173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 229
Target Start/End: Original strand, 37288429 - 37288596
Alignment:
Q  62 ttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagcctt 161  Q
    |||||||| || |||||||| |||||||| || || || ||||| || ||| |  ||| |||||||| ||| |||||||| |||| |||||||||||| |    
T  37288429 ttggttaatagctgcagaatctatgaagaggatacgaaggctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgt 37288528  T
Q  162 acagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgct 229  Q
    |||||||||| ||||| || || || |||||||||   ||||| ||| |||| |||| || |||||||    
T  37288529 acagtgctcccgctgataaagggaaacagaggatggtcgatgataggcggcctaagaagaaggatgct 37288596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 245
Target Start/End: Complemental strand, 23669977 - 23669887
Alignment:
Q  155 aagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgttt 245  Q
    ||||| ||||||||||||| |||||| ||| |||| ||  |||||||||||||||| || |||||||| |||||||||| ||| |||||||    
T  23669977 aagccctacagtgctcctgttgacaaaggagagcaaagattgaatgatgagaggagacctaagaggagagatgctcctgctgagattgttt 23669887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 27665388 - 27665554
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||||||||||||| | ||||| |||   || |||||||| || |||||||| || ||||| || || || ||||| || |||     
T  27665388 gacatcaagagggcgattgggtatcaacagctgagagtttttcaggatttggttaatagctgcagaatctacgaagaggatacgaaggctcactacaagg 27665487  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaa 180  Q
    |  ||| ||| |||| ||| |||||||| |||| |||||||||||| |||||||| || ||||||||    
T  27665488 tagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 27665554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 258
Target Start/End: Complemental strand, 43122941 - 43122709
Alignment:
Q  26 gccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgaga 125  Q
    ||||||||||| ||| |||| |||   |||||||| ||||| | ||| || || ||||| || || || || |||||||| |||||| ||| || ||||     
T  43122941 gccattgggtaccaaaagataagaaatttttctgaattggtgagcagctgtaggatttacgaggaggatacgaaagctcactataaggttaggaatgagc 43122842  T
Q  126 ggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggaggga 225  Q
    |||||   ||||| |||||  |||| || ||||| |||||||||| || |||||| ||| |||| ||  |||||||||||||||| || |||||||| ||    
T  43122841 ggaggaacaagggtcaacaagatcggccgaagccctacagtgctcatgttgacaaaggagagcaaagattgaatgatgagaggagacctaagaggagaga 43122742  T
Q  226 tgctcctgttgatattgtttgttataagtgtgg 258  Q
    || || ||  || |||||||| || ||||||||    
T  43122741 tgttcatgcagagattgtttgctacaagtgtgg 43122709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 16360003 - 16359837
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||| || |||||| | ||||| |||   || |||||||| || ||||| || ||||| || || ||||| ||||| || |||     
T  16360003 gacatcaagagggcgattggataccaacagctgagagtttttcaggacttggttaatagctgcaggatctatgaggaggataccaaggctcactacaagg 16359904  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaa 180  Q
    |  ||| |||||||| ||| |||||||| |||| |||||||||||| |||||||| || ||||||||    
T  16359903 tagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 16359837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 233
Target Start/End: Complemental strand, 23461406 - 23461256
Alignment:
Q  83 tatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagg 182  Q
    |||||||| ||||||||||||||||| ||| || ||| |||| ||| |  |||||| || |||| ||| |||||||| || ||||| |||||||| ||||    
T  23461406 tatgaagaggacaccaaagctcattacaaggttgtgaatgagcggaagactaagggccagcagagtcgccctaagccctatagtgcccctgctgataagg 23461307  T
Q  183 gaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctg 233  Q
    ||||  |||| |||   ||||| ||| |||| |||| || |||||||||||    
T  23461306 gaaaatagagaatggtcgatgataggcggcctaagaagaaggatgctcctg 23461256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 34569995 - 34569829
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||| || |||||| | ||||| |||   || |||||||| || ||||| || ||||| || || ||||| ||||| || |||     
T  34569995 gacatcaagagggcgattggataccaacagctgagagtttttcaggacttggttaatagctgcaggatctatgaggaggataccaaggctcactacaagg 34569896  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaa 180  Q
    |  ||| |||||||| ||| |||||||| |||| |||||||||||| |||||||| || ||||||||    
T  34569895 tagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 34569829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 230
Target Start/End: Original strand, 23537121 - 23537313
Alignment:
Q  38 caacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagg 137  Q
    ||||||||| |||| ||| |||| |||||||| || |||||||||||||| || || ||||| |||||||| ||| || ||| |||| ||| |  |||||    
T  23537121 caacagatctgagtttttcctgatttggttaatagctgcagaatttatgaggaggataccaaggctcattacaaggttgtgaatgagcggaagactaagg 23537220  T
Q  138 gacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctc 230  Q
    | || |||| ||| |||| ||| || ||||| ||| |||| ||||| || ||||| |||   ||||| ||| |||| |||| || ||||||||    
T  23537221 gccagcagagtcgccctatgccctatagtgcccctcctgataagggcaaacagagaatggtcgatgataggcggcctaagaagaaggatgctc 23537313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 53 - 233
Target Start/End: Complemental strand, 25429885 - 25429705
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    ||||||||| |||| | ||| ||||| |||||||| || || ||||| |||||||| |||||| ||| |||| ||| |  |||||| || |||| ||| |    
T  25429885 ttttctgagctggtgagcagttgcaggatttatgaggaggataccaaggctcattacaagattgtgaatgagcggaagactaagggtcagcagagtcgcc 25429786  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctg 233  Q
     ||||||||||||||| |||||| | ||||| ||  ||||||||  ||| || ||| |||| |||| || |||| ||||||    
T  25429785 ttaagccttacagtgcccctgctaataagggcaaatagaggatggttgaagataggcggcctaagaagaaggatactcctg 25429705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 22351420 - 22351257
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||| || |||||| | ||||| ||| | || |||||||| || ||||| || |||||||| || || || ||||| || ||||    
T  22351420 gacatcaagagggcgattggataccaacagcttagagtttttccagatttggttaatagctgcaggatctatgaagaggatactaaggctcactacaaga 22351321  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga 177  Q
    |  |||  ||||||| ||| ||||| || |||| ||||| |||||| |||||||| ||||||||    
T  22351320 tagtgaacgagaggaagggcaaggggcagcagagtcgtcataagccgtacagtgcccctgctga 22351257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 177
Target Start/End: Complemental strand, 27613809 - 27613694
Alignment:
Q  62 ttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagcctt 161  Q
    |||||||| || |||||||| || ||||| || || || ||||| || ||| |  ||| ||| |||| ||| ||||||||||||| |||||||||||| |    
T  27613809 ttggttaatagctgcagaatctacgaagaggatacgaaggctcactacaaggtagtgaatgaaaggaagggcaagggacaacagagtcgtcctaagccgt 27613710  T
Q  162 acagtgctcctgctga 177  Q
    ||||||| ||||||||    
T  27613709 acagtgcccctgctga 27613694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 180
Target Start/End: Complemental strand, 40712233 - 40712115
Alignment:
Q  62 ttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagcctt 161  Q
    ||||||||||| ||||| || ||||| || || ||||| ||||| || ||| |  ||| ||| |||| ||| |||||||| |||| |||||||||||| |    
T  40712233 ttggttaacagctgcaggatctatgaggaggataccaaggctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgt 40712134  T
Q  162 acagtgctcctgctgacaa 180  Q
    ||||||| || ||||||||    
T  40712133 acagtgcccccgctgacaa 40712115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 177
Target Start/End: Complemental strand, 19773413 - 19773298
Alignment:
Q  62 ttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagcctt 161  Q
    |||||||| || ||||| || |||||||| || || || ||||| || ||| |  ||| |||||||| ||| |||||||| |||| |||||||||||| |    
T  19773413 ttggttaatagctgcaggatctatgaagaggatacgaaggctcactacaaggtagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgt 19773314  T
Q  162 acagtgctcctgctga 177  Q
    ||||||| || |||||    
T  19773313 acagtgcccccgctga 19773298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 248
Target Start/End: Complemental strand, 18782498 - 18782384
Alignment:
Q  134 aagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctg 233  Q
    ||||| ||||||| ||| ||||||||||| ||||| |||||||| ||||| || ||||| |||   ||||| ||| || | |||| || |||||||||||    
T  18782498 aagggccaacagagtcgccctaagccttatagtgcccctgctgataagggcaaacagagaatggtcgatgataggtggtctaagaagaaggatgctcctg 18782399  T
Q  234 ttgatattgtttgtt 248  Q
      || ||||||||||    
T  18782398 cggagattgtttgtt 18782384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 177
Target Start/End: Original strand, 27682392 - 27682448
Alignment:
Q  121 tgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga 177  Q
    |||||| | ||| |||||||| |||| |||||||||||| |||||||| ||||||||    
T  27682392 tgagagaaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctgctga 27682448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 177; Significance: 2e-95; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 48426491 - 48426247
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| ||||| ||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||    
T  48426491 gacatcaaaagagctattgggtatcagcagatcagagtcttctctgagttggttaataggtgcagaatctatgaagaagacaccaaagctcattacaaga 48426392  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||  |||||| ||||||||    
T  48426391 taatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgggtgatgataggaggcc 48426292  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| |||||||||||||| |||||||| || ||||||||    
T  48426291 caagaggagagatgctcctgttgagattgtttgctacaagtgtgg 48426247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 31536769 - 31537013
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| ||||| ||||||||||| |||||||||||||| ||||||||||| ||||| || |||||||||||||||||||||||||||||||| ||||    
T  31536769 gacatcaaaagagctattgggtatcagcagatcagagtcttctctgagttggtaaacagatgtagaatttatgaagaagacaccaaagctcattacaaga 31536868  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| ||    
T  31536869 taatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttatagtgctcctgctgacaaaggaaagcagaggatgaatgatgataggagacc 31536968  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| |||||||||  ||| ||||||||||||||||||||    
T  31536969 caagaggagagatgctccttctgagattgtttgttataagtgtgg 31537013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 38909598 - 38909842
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| ||||| ||||||||||| |||||||||||||| ||||||||||| ||||| || |||||||||||||||||||||||||||||||| ||||    
T  38909598 gacatcaaaagagctattgggtatcagcagatcagagtcttctctgagttggtaaacagatgtagaatttatgaagaagacaccaaagctcattacaaga 38909697  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||  |||||| ||||||||    
T  38909698 taatgagtgggaggaggggtaagggacaacagaatcgtcctaaaccttacagtgctcctgctgacaaaggaaagcagaggatgggtgatgataggaggcc 38909797  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| |||||||||||||| |||||||| || ||||||||    
T  38909798 caagaggagagatgctcctgttgagattgtttgctacaagtgtgg 38909842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 37680667 - 37680423
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| ||||| ||||||||||| |||||||||||||| | |||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||    
T  37680667 gacatcaaaagagctattgggtatcagcagatcagagtcttctttgagttggttaataggtgcagaatctatgaagaagacaccaaagctcattacaaga 37680568  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||  |||||| ||||||||    
T  37680567 taatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctactgacaaaggaaagcagaagatgggtgatgataggaggcc 37680468  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| ||| |||||||||| |||||||| || ||||||||    
T  37680467 caagaggagagatactcctgttgagattgtttgctacaagtgtgg 37680423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 52989358 - 52989115
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| ||||| ||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| || |    
T  52989358 gacatcaaaagagctattgggtatcagcagatcagagtcttctctgagttggttaacaggtgtagaatttatgaagaagacaccaaagctcattacaa-a 52989260  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||    
T  52989259 taatgagtgagaggaggggtaagggacagcaaaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgaatgatgataggaggcc 52989160  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     |||||||| |||||||||  ||| ||||||||||| ||||||||    
T  52989159 taagaggagagatgctccttctgagattgtttgttacaagtgtgg 52989115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 16 - 258
Target Start/End: Complemental strand, 20297999 - 20297757
Alignment:
Q  16 catcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatt 115  Q
    |||||| |||||||||||||||||  ||||||  || ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||     
T  20297999 catcaaaagagccattgggtatcagtagatcatggtgttttctgagttggttaacaggtgtagaatttatgaagaagacaccaaagctcattacaagata 20297900  T
Q  116 atgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggccca 215  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||| ||||  |||||| ||||||||||    
T  20297899 atgagtgagaggaggggtaagggacatcagaatcgtcctaagccttacagtgctcctactgacaagggaaaacagaagatgggtgatgacaggaggccca 20297800  T
Q  216 agaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||| |||||||||| ||| ||||||||||| ||||||||    
T  20297799 agaggagagatgctcctgctgagattgtttgttacaagtgtgg 20297757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 29 - 258
Target Start/End: Complemental strand, 21961630 - 21961401
Alignment:
Q  29 attgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagagga 128  Q
    ||||||||||| |||||||||||||| ||||| ||||| ||||| |||| |||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  21961630 attgggtatcagcagatcagagtcttctctgaattggtaaacagatgcataatttatgaagaagacaccaaagctcattacaagataatgagtgagagga 21961531  T
Q  129 ggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgc 228  Q
    | ||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||| ||||| ||||||||||| |||||    
T  21961530 gaggtaagggacagcagaatcgtcctaagccttacagtgctccttctgacaaaggaaagcagaagatgaatgatgataggagacccaagaggagagatgc 21961431  T
Q  229 tcctgttgatattgtttgttataagtgtgg 258  Q
    ||||  ||| ||||||||||| ||||||||    
T  21961430 tccttctgagattgtttgttacaagtgtgg 21961401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 20074481 - 20074725
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| ||||| ||||||||| | ||||||||| |||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||    
T  20074481 gacatcaaaagagctattgggtattagcagatcagattcttctctgagttggttaacatgtgtagaatttatgaagaagacaccaaagctcattacaaga 20074580  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||| ||||| |||||| |||||||     
T  20074581 taatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgcttctgctgacaaaggaaagcagaagatgagtgatgacaggaggct 20074680  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     |||||||| ||||||||   ||| ||||| ||||| ||||||||    
T  20074681 taagaggagagatgctcccactgagattgtgtgttacaagtgtgg 20074725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 17 - 258
Target Start/End: Original strand, 24096390 - 24096631
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||| ||||| |||||||||||  |||| ||| | || ||||||||||| | ||| ||||| || ||||| |||||||||||||||||||| ||| | |    
T  24096390 atcaaaagagctattgggtatcagaagattagaattttctctgagttggtgagcagctgcaggatatatgaggaagacaccaaagctcattacaaggtga 24096489  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
     ||||||| | ||  ||||||||||||||| ||||||||| ||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  24096490 cgagtgagcgaagaagtaagggacaacagagtcgtcctaaaccttatagtgctcctgctgacaaaggaaaacagaggatgaatgatgagaggaggcccaa 24096589  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||||| |||||||||||||| ||||||||||  ||||||||    
T  24096590 gaggagagatgctcctgttgagattgtttgtttcaagtgtgg 24096631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 19857892 - 19857677
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||||||||||||||| |||||  |||| |||  ||||||||||||||| | ||| || |  || |||||||| || || || |||||||| |||     
T  19857892 gacatcaagagagccattggctatcagaagattagaaacttttctgagttggtaagcagctgtaagatctatgaagaggatactaaggctcattacaagg 19857793  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||  | || |||||||||||||||| ||||||||| || || |||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  19857792 tgatgagtgaacgcagaggtaagggacaacagagtcgtcctaaaccatatagtgctcctgctgacaagggtaagcagaggttgaatgatgagaggaggcc 19857693  T
Q  214 caagaggagggatgct 229  Q
     |||||||| ||||||    
T  19857692 taagaggagagatgct 19857677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 60 - 258
Target Start/End: Original strand, 20832719 - 20832916
Alignment:
Q  60 agttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagcc 159  Q
    ||||||| | ||| || ||||| |||||| |||| || ||||||||||| ||| | ||||||||  | || || |||||||| |||| ||||||||| |     
T  20832719 agttggtgagcagctgtagaatctatgaataagatacgaaagctcattacaaggtgatgagtgaccgtagaggcaagggacagcagagtcgtcctaaaca 20832818  T
Q  160 ttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    | | |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||| || ||||||||    
T  20832819 t-atagtgctcctgctgacaagggaaagcagaggctgaatgatgagaggagacccaagaggagagatgctcctgttgatattgtttgctacaagtgtgg 20832916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 83 - 232
Target Start/End: Original strand, 22015586 - 22015735
Alignment:
Q  83 tatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagg 182  Q
    ||||||||||  || ||||||||||| ||| | ||||||||| | ||||| |||||||| |||| |||||| ||||| || |||||||||||||||||||    
T  22015586 tatgaagaagttacgaaagctcattacaaggtgatgagtgagcgtaggggaaagggacagcagagtcgtccgaagccgtatagtgctcctgctgacaagg 22015685  T
Q  183 gaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcct 232  Q
    | ||| |||| || ||||||||||||||||| |||| ||| |||||||||    
T  22015686 gtaagaagagaataaatgatgagaggaggccaaagaagagagatgctcct 22015735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 56 - 232
Target Start/End: Original strand, 21742366 - 21742542
Alignment:
Q  56 tctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtccta 155  Q
    ||||||||||| |  || ||||| || |||||||| || || ||||||||||| ||| | ||||||||| | || |||||||||||  ||| |||||| |    
T  21742366 tctgagttggtgagtagctgcaggatatatgaagaggatacgaaagctcattacaaggtgatgagtgagcgcagaggtaagggacagtagagtcgtccga 21742465  T
Q  156 agccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcct 232  Q
    | || || ||||||||| |||||||||| ||||||||  ||||||||||||||||||| |||||||| |||||||||    
T  21742466 aaccgtatagtgctcctactgacaagggtaagcagagactgaatgatgagaggaggcctaagaggagagatgctcct 21742542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 232
Target Start/End: Original strand, 21738847 - 21739026
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    |||||||| ||||| |  || ||||| || |||||||| || || ||||||||||| ||| | ||||||||  | || |||||||||||||||| |||||    
T  21738847 ttttctgaattggtaagtagctgcaggatatatgaagaggatacgaaagctcattacaaggtgatgagtgaccgcagaggtaagggacaacagagtcgtc 21738946  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcct 232  Q
    | ||||| || || || | |||||||||||| ||||||||  ||||||||||||||||||| |||||||| | |||||||    
T  21738947 cgaagccatatagcgcccatgctgacaagggtaagcagagattgaatgatgagaggaggcctaagaggagaggtgctcct 21739026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 19109953 - 19109739
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||| ||||| || ||||| || |||||||| ||||| ||| | || ||||| || || ||||| || |||||||| || || || ||||| | |||||    
T  19109953 gacattaagagggcgattggataccaacagattagagt-tttccggatttggtcaatagctgcaggatctatgaagaggatactaaggctcactgtaaga 19109855  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    || | | |||||||| ||| ||||||||||||| |||||||||||| |||||||| |||||||| || || || |||||||||  |||||| ||| ||||    
T  19109854 ttgtcaatgagaggaagggcaagggacaacagagtcgtcctaagccgtacagtgcccctgctgataaagggaaacagaggatggttgatgataggcggcc 19109755  T
Q  214 caagaggagggatgct 229  Q
     |||| || |||||||    
T  19109754 taagaagaaggatgct 19109739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 213
Target Start/End: Complemental strand, 16379642 - 16379482
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    ||||||||| |||| | ||| ||||| |||||||| || || || || |||||||| ||| || ||| |||| |||  || ||||| ||||||| |||||    
T  16379642 ttttctgagctggtgagcagatgcaggatttatgaggaggatactaaggctcattacaaggttgtgaatgagcggaaaggcaagggtcaacagagtcgtc 16379543  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    ||||||||||||||||  ||||||| ||||| || |||||  | |||||||||||||||||    
T  16379542 ctaagccttacagtgcctctgctgataagggcaaacagagagttaatgatgagaggaggcc 16379482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 192
Target Start/End: Complemental strand, 21752631 - 21752456
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||||||||| ||||| ||  |  ||||| ||||||| |||||| |||| | ||| ||||| |||||||| ||||| |||||  ||||||| ||||||     
T  21752631 atcaagagagcaattggttactagaagatccgagtcttctctgagctggtgagcagttgcaggatttatgaggaagataccaagactcattacaagattg 21752532  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagag 192  Q
    ||| |||| | |  | |||||| || |||| |||||||||||||||||||||  ||||||| |||||||| |||||    
T  21752531 tgaatgagcgaaaagctaagggtcagcagagtcgtcctaagccttacagtgccactgctgataagggaaaacagag 21752456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 52 - 210
Target Start/End: Original strand, 21044964 - 21045122
Alignment:
Q  52 cttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgt 151  Q
    |||||||||| |||| | ||| |||||||| ||||| ||||| || || |||||||| ||| || ||| | ||||||  || ||||| || || | ||||    
T  21044964 cttttctgagctggtgagcagttgcagaatatatgaggaagatactaaggctcattacaaggttgtgaataagaggaaaggcaagggtcagcaaagtcgt 21045063  T
Q  152 cctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggag 210  Q
    || ||||||||||||||||||||||| ||||| ||||| ||  | ||||||||||||||    
T  21045064 ccaaagccttacagtgctcctgctgataagggcaagcaaagagttaatgatgagaggag 21045122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 77 - 258
Target Start/End: Complemental strand, 18273322 - 18273141
Alignment:
Q  77 agaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctg 176  Q
    ||||||||||| || || || || |||||||||||| ||| ||||||| |||||   ||||| || ||   |||||| ||||| ||||||||||||| ||    
T  18273322 agaatttatgaggaggatacgaaggctcattataaggttaggagtgagcggaggaacaagggtcagcaaggtcgtccgaagccctacagtgctcctgttg 18273223  T
Q  177 acaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||| ||  |||| ||  |||||||||||||||| || ||||| || |||| ||||  ||| ||||||||||| ||||||||    
T  18273222 acaaaggggagcaaagattgaatgatgagaggagacctaagagaagagatgttcctactgagattgtttgttacaagtgtgg 18273141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 213
Target Start/End: Complemental strand, 22117263 - 22117102
Alignment:
Q  52 cttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgt 151  Q
    |||||||||| |||| | ||| |||||||| || || ||||| || || |||||||| ||| || ||| ||||||||  || ||||| || || | ||||    
T  22117263 cttttctgagctggtgagcagttgcagaatatacgaggaagatactaaggctcattacaaggttttgaatgagaggaaaggcaagggtcagcaaagtcgt 22117164  T
Q  152 cctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    || ||||||||||||| ||||||||| |||||||| || ||  | |||||||||||||||||    
T  22117163 ccaaagccttacagtgttcctgctgataagggaaaacaaagagttaatgatgagaggaggcc 22117102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 20853532 - 20853776
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||||||||||||||| |||||  |||||||| | || || || ||||| |  || || ||||||||||| || || || || ||||||||||||     
T  20853532 gacatcaagagagccattggatatcagaagatcagaattttctcagaattggtgagtagctgtagaatttatgaggaggatacaaaggctcattataagg 20853631  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||| ||||  |||  |||||| ||    | ||| || ||||| |||||||||||| || |||| || || || ||  ||||||||||||||  |||    
T  20853632 tgatgagcgagaaaaggaataagggtcagagtagtcgcccgaagccctacagtgctcctactaacaaaggcaaacaaagattgaatgatgagaggcagcc 20853731  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     ||| ||||  |||||||||||||| |||||||||| || |||||    
T  20853732 taaggggagaaatgctcctgttgatgttgtttgttacaaatgtgg 20853776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 74 - 229
Target Start/End: Complemental strand, 22400844 - 22400689
Alignment:
Q  74 tgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctg 173  Q
    ||||| || |||||||| || ||||| ||||| ||||||||| |||  ||||||| ||| |||||| | |||| |||||||||||  |||||||| ||||    
T  22400844 tgcaggatctatgaagaggataccaaggctcactataagattgtgaacgagaggaagggcaagggagagcagagtcgtcctaagctgtacagtgcccctg 22400745  T
Q  174 ctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgct 229  Q
    |||| || || || |||||||||   ||||| ||| |||| |||| || |||||||    
T  22400744 ctgataaagggaaacagaggatggtcgatgataggcggcctaagaagatggatgct 22400689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 41350550 - 41350625
Alignment:
Q  121 tgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatg 196  Q
    |||||||| |||||||||||| |||| |||||||||||| |||||||| || ||||||||||| || |||| ||||    
T  41350550 tgagaggaagggtaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaagggtaaacagaagatg 41350625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 177
Target Start/End: Original strand, 51330315 - 51330430
Alignment:
Q  62 ttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagcctt 161  Q
    |||||||| || ||||| || |||||||| || || || ||||| || ||| |  ||| |||||||| |||||||||||| |||| |||||||||||| |    
T  51330315 ttggttaatagctgcaggatctatgaagaggatacgaaggctcactacaaggtagtgaatgagaggaagggtaagggacagcagagtcgtcctaagccgt 51330414  T
Q  162 acagtgctcctgctga 177  Q
    ||||||| ||||||||    
T  51330415 acagtgcccctgctga 51330430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 33387804 - 33387970
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || |||||||| |||||| | ||||| ||| |  | |||||||| || ||||| || |||||||| || || || ||||| || |||     
T  33387804 gacatcaagagggcgattgggtaccaacagctgagagtttttccgaatttggttaatagctgcaggatctatgaagaggatacgaaggctcactacaagg 33387903  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaa 180  Q
    |  ||| ||| |||| ||| |||||||| |||| |||||||||||| |||||||| || ||||||||    
T  33387904 tagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 33387970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 16347477 - 16347552
Alignment:
Q  121 tgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatg 196  Q
    |||||||| ||| |||||||| |||| |||||||||||| |||||||| || ||||||||||| || |||| ||||    
T  16347477 tgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaagggtaaacagaagatg 16347552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 196
Target Start/End: Original strand, 16354125 - 16354200
Alignment:
Q  121 tgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatg 196  Q
    |||||||| ||| |||||||| |||| |||||||||||| |||||||| || ||||||||||| || |||| ||||    
T  16354125 tgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaagggtaaacagaagatg 16354200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 232
Target Start/End: Original strand, 17041831 - 17042006
Alignment:
Q  57 ctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaa 156  Q
    |||| ||||| ||||| || || || || ||||| || |||| ||||||||| ||| || | | |||||||| |  |||||| || |||| ||| |||||    
T  17041831 ctgatttggtgaacagctgtaggatctacgaagaggataccagagctcattacaaggttgttaatgagaggaagactaagggccagcagagtcgccctaa 17041930  T
Q  157 gccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcct 232  Q
    |||||| ||||| |||||||| ||||| |||||||| |||   ||||| ||| |||| |||| || ||||||||||    
T  17041931 gccttatagtgcccctgctgataagggcaagcagagaatggtcgatgataggcggcctaagaagaaggatgctcct 17042006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 21842796 - 21842633
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||| || |||||| | ||||| |||   || ||||| || || ||||| || |||||||| || ||||| ||||| || ||||    
T  21842796 gacatcaagagggcgattggataccaacagcttagagtttttcaggatttggtcaatagctgcaggatctatgaagaggataccaaggctcactacaaga 21842697  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga 177  Q
    |  |||  ||||||| ||| |||||||| |||| |||||||||||| |||||||| || |||||    
T  21842696 tagtgaacgagaggaagggcaagggacatcagagtcgtcctaagccgtacagtgcccccgctga 21842633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 182
Target Start/End: Complemental strand, 20921966 - 20921858
Alignment:
Q  74 tgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctg 173  Q
    |||||||| |||||||| || |||||||| ||||| ||   | | ||||| | || |||||||   ||||||| |||||||||||||||||||||||| |    
T  20921966 tgcagaatctatgaagaggataccaaagcacattacaaagctgtaagtgaaaagaagggtaagaatcaacagagtcgtcctaagccttacagtgctcccg 20921867  T
Q  174 ctgacaagg 182  Q
    |||| ||||    
T  20921866 ctgataagg 20921858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 192
Target Start/End: Complemental strand, 22402119 - 22402001
Alignment:
Q  74 tgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctg 173  Q
    ||||| |||||||| || || || || |||||||| |||||| | | |||| ||| |  |||||| || |||| ||| ||||||||||||||||| ||||    
T  22402119 tgcaggatttatgaggaggatactaaggctcattacaagattgtaaatgagcggaagactaagggtcagcagagtcgccctaagccttacagtgcccctg 22402020  T
Q  174 ctgacaagggaaagcagag 192  Q
    |||| ||||| || |||||    
T  22402019 ctgataagggcaaacagag 22402001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 21833779 - 21833723
Alignment:
Q  121 tgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga 177  Q
    |||||||| ||| |||||||| |||| |||||||||||| |||||||| || |||||    
T  21833779 tgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctga 21833723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 176; Significance: 7e-95; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 14 - 244
Target Start/End: Complemental strand, 20848789 - 20848561
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20848789 gacatcaagagagctattggatatcaacagatcagaatcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 20848690  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||  |||||| ||||   |    
T  20848689 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgggtgatgatagga--tc 20848592  T
Q  214 caagaggagggatgctcctgttgatattgtt 244  Q
    ||||||||| |||||||||||||| ||||||    
T  20848591 caagaggagagatgctcctgttgagattgtt 20848561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 17 - 258
Target Start/End: Original strand, 19716260 - 19716501
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||||||||||||||| |||||  |||| |||   || ||||||||||| | ||| ||||| || ||||| |||||||| ||||||||||||||| | |    
T  19716260 atcaagagagccattggctatcagaagattagaaatttctctgagttggtaagcagctgcaggatatatgaggaagacactaaagctcattataaggtga 19716359  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||| | || ||||||||||| |||| ||||||||| || |||||||| | || ||||||||||||||||||  ||||||||||||||||||||||    
T  19716360 tgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccatacagtgcccttgttgacaagggaaagcagagattgaatgatgagaggaggcccaa 19716459  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     ||||| |||||||||| ||| || |||||||| ||||||||    
T  19716460 taggagagatgctcctgctgagatcgtttgttacaagtgtgg 19716501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 17 - 258
Target Start/End: Original strand, 19720823 - 19721064
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||||||||||||||| |||||  |||| |||   || ||||||||||| | ||| ||||| || ||||| |||||||| ||||||||||||||| | |    
T  19720823 atcaagagagccattggctatcagaagattagaaatttctctgagttggtaagcagctgcaggatatatgaggaagacactaaagctcattataaggtga 19720922  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||| | || ||||||||||| |||| ||||||||| || |||||||| | || ||||||||||||||||||  ||||||||||||||||||||||    
T  19720923 tgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccatacagtgcccttgttgacaagggaaagcagagattgaatgatgagaggaggcccaa 19721022  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     ||||| |||||||||| ||| || |||||||| ||||||||    
T  19721023 taggagagatgctcctgctgagatcgtttgttacaagtgtgg 19721064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 52 - 246
Target Start/End: Complemental strand, 23274758 - 23274564
Alignment:
Q  52 cttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgt 151  Q
    ||||||||||||||| | ||| || || || |||||||| || || || |||||||| ||| | ||||||||  | ||||| ||||||||||||| ||||    
T  23274758 cttttctgagttggtaagcagctgtaggatctatgaagaggatacgaaggctcattacaaggtgatgagtgaacgtaggggcaagggacaacagagtcgt 23274659  T
Q  152 cctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttg 246  Q
    || ||||  || |||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||| |||||||||  ||| ||||||||    
T  23274658 ccgaagcagtatagtgctcctgctgacaagggtaagcagaggttaaatgatgagaggaggcccaagaggagagatgctcctactgaaattgtttg 23274564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 258
Target Start/End: Original strand, 23097261 - 23097502
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||| ||| |||| |||||  ||||||||   ||||||||||| || |  || |||||||| || || |||||  | ||||||||||| ||| | |    
T  23097261 atcaagagggcctttggctatcagaagatcagaactttttctgagtttgtaagtagctgcagaatctacgaggaagattcaaaagctcattacaaggtga 23097360  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||| |||| ||||| | ||| |||| ||  |||||||| |||||||| ||||||||||||||||||||  |  ||||||||||||||||||||||    
T  23097361 tgagtgagcggagaggtaaagcacatcagagtctccctaagccgtacagtgcccctgctgacaagggaaagcaacgactgaatgatgagaggaggcccaa 23097460  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||||| |||||||||| ||| || ||||| | |||||||||    
T  23097461 gaggagagatgctcctgctgagatagtttgctttaagtgtgg 23097502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 12577556 - 12577312
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||| || || |||||||| ||| | |||||||| ||||| |   | || || || || || || ||||||||||||||||||||      
T  12577556 gacatcaagagagccataggataccaacagattagaattttttctgatttggtgagtcgctgtaggatctacgaggaggacaccaaagctcattataaag 12577457  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||| | || ||||||||||| |||||||||||||| || || ||||| || ||||||||||| ||||||||  | |||||||||||||||||    
T  12577456 tgatgagtgagcgaagaggtaagggacatcagaatcgtcctaaaccgtatagtgccccggctgacaagggtaagcagagacttaatgatgagaggaggcc 12577357  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     |  | |||||||||||||| ||| || || || | |||||||||    
T  12577356 gagtaagagggatgctcctgctgagatagtgtgctttaagtgtgg 12577312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 196
Target Start/End: Original strand, 44382813 - 44382995
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||||||||||| | | ||||| ||| | || ||||||||||| ||||| || ||||| || || ||||| ||||| || |||     
T  44382813 gacatcaagagggcgattgggtatcaacggctgagagtttttccagatttggttaacagctgcaggatctatgaggaggataccaaggctcactacaagg 44382912  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatg 196  Q
    |  ||| |||||||| ||| |||||||| |||| |||||||||||| |||||||| || ||||||||||| || |||| ||||    
T  44382913 tagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaggggaaacagaagatg 44382995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 258
Target Start/End: Complemental strand, 21901728 - 21901496
Alignment:
Q  26 gccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgaga 125  Q
    |||||||| || ||| ||||||||   |||||||| ||||| | ||| || ||||||||||| || || || ||| ||||||||||| ||||||||||||    
T  21901728 gccattggttaccaaaagatcagacaattttctgaattggtgagcagctgtagaatttatgaggaggatacgaaatctcattataaggttatgagtgaga 21901629  T
Q  126 ggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggaggga 225  Q
     ||||   || || || ||   || ||| ||||| |||||||||||||||||||| || || |||||  |||||||||||||||| || ||||| || ||    
T  21901628 agaggaacaaaggccatcaaggtcatccgaagccctacagtgctcctgctgacaaagggaaacagagattgaatgatgagaggagacctaagagaagaga 21901529  T
Q  226 tgctcctgttgatattgtttgttataagtgtgg 258  Q
    || ||||  ||| |||||||| || ||||||||    
T  21901528 tgttcctactgagattgtttgctacaagtgtgg 21901496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 215
Target Start/End: Complemental strand, 19817984 - 19817822
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    ||||| |||||||| |  || |||||||||| |||| | |||| ||||||||||||||||||||||| | || | |||||||||   ||| | | ||||     
T  19817984 ttttccgagttggtgagtagctgcagaatttttgaaaatgacaacaaagctcattataagattatgaataagcgcaggggtaagcaccaagaaagtcgtg 19817885  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggccca 215  Q
     ||| |||||||||||||| ||| | ||||| ||||||||| ||| |||||||||||||||||    
T  19817884 gtaaaccttacagtgctccggctaaaaagggtaagcagagggtgattgatgagaggaggccca 19817822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 177
Target Start/End: Complemental strand, 10872002 - 10871887
Alignment:
Q  62 ttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagcctt 161  Q
    |||||||| || ||||| || || ||||| || ||||| ||||| || ||| |  ||| |||||||| ||||||||||||||||| |||||||||||| |    
T  10872002 ttggttaatagctgcaggatctacgaagaggataccaaggctcactacaaggtagtgaatgagaggaagggtaagggacaacagagtcgtcctaagccgt 10871903  T
Q  162 acagtgctcctgctga 177  Q
    ||||||| ||||||||    
T  10871902 acagtgcccctgctga 10871887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 24265570 - 24265407
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||| ||||| || ||||||||||||||| | ||||| ||||| || |||||||| || ||||| || || ||||| || || || ||||| || |||     
T  24265570 gacattaagagggcgattgggtatcaacagctgagagttttttcagacttggttaatagctgcaggatctacgaagaggatacgaaggctcactacaagg 24265471  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga 177  Q
    |  ||| |||||| | ||| |||||||| |||| |||||||||||| |||||||| ||||||||    
T  24265470 tagtgaatgagagaaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctgctga 24265407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 196
Target Start/End: Complemental strand, 24678687 - 24678508
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||| || ||||| || ||| ||||| |||| ||||  |||||||| ||||| |||||||||||||| || || ||||| |||||||| |||||      
T  24678687 atcaagagggcaattggataccaatagatccgagttttttgcgagttggtgaacagttgcagaatttatgacgaggataccaaggctcattacaagatcg 24678588  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatg 196  Q
    ||| |||| ||| |  |||||| ||| ||| ||| |||||||| || || || |||||||| ||||| || |||||||||    
T  24678587 tgaatgagcggaagactaagggccaatagagtcgccctaagccctatagcgcccctgctgataagggcaaacagaggatg 24678508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 204
Target Start/End: Original strand, 30208228 - 30208350
Alignment:
Q  82 ttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaag 181  Q
    ||||||||| |||||||||||||||||||||||| ||| |||| |||||||||||   ||||| | |||   |||||||||||  ||||  ||||| |||    
T  30208228 ttatgaagatgacaccaaagctcattataagattctgaatgagcggaggggtaagcaccaacaaagtcggggtaagccttacatcgctctggctgataag 30208327  T
Q  182 ggaaagcagaggatgaatgatga 204  Q
    || || |||||| ||||||||||    
T  30208328 ggtaaacagagggtgaatgatga 30208350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 196
Target Start/End: Original strand, 23028708 - 23028884
Alignment:
Q  20 aagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatga 119  Q
    ||||| || ||||| || ||||||||| |||| || || |||||||| ||||| || ||||||||||| || || ||||| |||||||| |||||| |||    
T  23028708 aagagggcaattggataccaacagatccgagttttctccgagttggtgaacagttgtagaatttatgaggaggataccaaggctcattacaagattgtga 23028807  T
Q  120 gtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatg 196  Q
     |||| |||    ||| || || |||| ||| |||||||| || ||||| |||||||| ||||| || |||||||||    
T  23028808 atgagcggaatactaaaggccagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacagaggatg 23028884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 9338782 - 9338616
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||| || |||||| | ||||| |||   || |||||||| || ||||| || ||||| || || ||||| ||||| || |||     
T  9338782 gacatcaagagggcgattggataccaacagctgagagtttttcaggacttggttaatagctgcaggatctatgaggaggataccaaggctcactacaagg 9338683  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaa 180  Q
    |  ||| |||||||| ||| |||||||| |||| |||||||||||| |||||||| || ||||||||    
T  9338682 tagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 9338616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 9487416 - 9487250
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||| || |||||| | ||||| |||   || |||||||| || ||||| || ||||| || || ||||| ||||| || |||     
T  9487416 gacatcaagagggcgattggataccaacagctgagagtttttcaggacttggttaatagctgcaggatctatgaggaggataccaaggctcactacaagg 9487317  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaa 180  Q
    |  ||| |||||||| ||| |||||||| |||| |||||||||||| |||||||| || ||||||||    
T  9487316 tagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 9487250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 196
Target Start/End: Original strand, 24873993 - 24874175
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| || || ||||||||||||||| | ||||| ||| | || ||||| || || ||||| || |||||||| || || || ||||| || ||||    
T  24873993 gacatcaaaagggcgattgggtatcaacagcttagagtttttccagatttggtaaatagttgcaggatctatgaagaggatacgaaggctcactacaaga 24874092  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatg 196  Q
    |  |||  ||||||| ||| |||||||  |||| |||| ||||||| |||||||| |||||||| || || || |||||||||    
T  24874093 tagtgaacgagaggaagggcaagggacggcagagtcgttctaagccgtacagtgcccctgctgataaagggaaacagaggatg 24874175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 258
Target Start/End: Complemental strand, 28350944 - 28350834
Alignment:
Q  148 tcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgt 247  Q
    |||||| ||||| || |||||||||| |||||| ||  |||| ||  |||||||||||||||| || |||||||| |||| ||||| ||| ||||||||     
T  28350944 tcgtccgaagccctatagtgctcctgttgacaaaggggagcaaagattgaatgatgagaggagacctaagaggagagatgttcctgctgagattgtttgc 28350845  T
Q  248 tataagtgtgg 258  Q
    || ||||||||    
T  28350844 tacaagtgtgg 28350834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 180
Target Start/End: Complemental strand, 16984392 - 16984274
Alignment:
Q  62 ttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagcctt 161  Q
    ||||||||||| ||||| || ||||| || || ||||| ||||| || ||| |  ||| ||| |||| ||| |||||||| |||| |||||||||||| |    
T  16984392 ttggttaacagctgcaggatctatgaggaggataccaaggctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgt 16984293  T
Q  162 acagtgctcctgctgacaa 180  Q
    ||||||| || ||||||||    
T  16984292 acagtgcccccgctgacaa 16984274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 196
Target Start/End: Complemental strand, 17002152 - 17002018
Alignment:
Q  62 ttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagcctt 161  Q
    |||||||| || ||||| || ||||| || || ||||| ||||| || ||| |  ||| ||| |||| ||| |||||||| |||| |||||||||||| |    
T  17002152 ttggttaatagctgcaggatctatgaggaggataccaaggctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgt 17002053  T
Q  162 acagtgctcctgctgacaagggaaagcagaggatg 196  Q
    ||||||| |||||||| || ||||| |||| ||||    
T  17002052 acagtgcccctgctgataaaggaaaacagaagatg 17002018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 213
Target Start/End: Original strand, 24817218 - 24817279
Alignment:
Q  152 cctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    ||||||||||| |||||||||||||| ||||| || || ||  |||||||||||||||||||    
T  24817218 cctaagccttatagtgctcctgctgataagggtaaacaaagattgaatgatgagaggaggcc 24817279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 196
Target Start/End: Original strand, 23039904 - 23039999
Alignment:
Q  101 gctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatg 196  Q
    |||||||| |||||| ||| |||| ||| |  |||||| || |||| ||  ||||||||||||||||| |||||||| ||||| || |||||||||    
T  23039904 gctcattacaagattgtgaatgagcggaagactaagggtcagcagagtctccctaagccttacagtgcccctgctgataagggcaaacagaggatg 23039999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 180
Target Start/End: Original strand, 22322633 - 22322751
Alignment:
Q  62 ttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagcctt 161  Q
    |||||||| || ||||| || |||||||| || || || ||||| || ||| |  ||| ||| |||| ||| |||||||| |||| |||||||||||| |    
T  22322633 ttggttaatagctgcaggatctatgaagaggatacgaaggctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgt 22322732  T
Q  162 acagtgctcctgctgacaa 180  Q
    ||||||| || ||||||||    
T  22322733 acagtgcccccgctgacaa 22322751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 232
Target Start/End: Original strand, 23116371 - 23116517
Alignment:
Q  86 gaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaa 185  Q
    ||||| || |||| ||||||||| ||| || | | |||||||| |  ||||||  | |||| ||| ||||||||||| ||||| |||||||| ||||| |    
T  23116371 gaagaggataccagagctcattacaaggttgttaatgagaggaagactaagggcaagcagagtcgccctaagccttatagtgcccctgctgataagggca 23116470  T
Q  186 agcagaggatgaatgatgagaggaggcccaagaggagggatgctcct 232  Q
    ||||||| |||   ||||| ||| |||| |||| || ||||||||||    
T  23116471 agcagagaatggtcgatgataggcggcctaagaagaaggatgctcct 23116517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 173; Significance: 4e-93; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 3261494 - 3261738
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| ||||| ||||||||||| |||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||    
T  3261494 gacatcaaaagagctattgggtatcagcagatcagagtcttctctgagttggttaataggtgcagaatctatgaagaagacaccaaagctcattacaaga 3261593  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||  |||||| ||||||||    
T  3261594 taatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgggtgatgataggaggcc 3261693  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| |||||||||||||| |||||||| || ||||||||    
T  3261694 caagaggagagatgctcctgttgagattgtttgctacaagtgtgg 3261738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 7357839 - 7357595
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||| ||||    
T  7357839 gacatcaaaagagctattgggtatcaacagatcagagtcttttctgagttggttaacaggtgtaggatttatgaagaagacaccaaggctcattacaaga 7357740  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||  |||||| ||||||||    
T  7357739 taatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacattgctcctgctgacaaaggaaagcagaagatgggtgatgataggaggcc 7357640  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| |||||||||| ||| ||||||||||| ||| ||||    
T  7357639 caagaggagagatgctcctgctgagattgtttgttacaagagtgg 7357595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 29450237 - 29450481
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| || || ||||| ||||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  29450237 gacatcaaaagggctattggatatcaacagatcagaatcttttctgagttggttaataggtgcaaaatttatgaagaagacaccaaagctcattataaga 29450336  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||  |||||| ||||||||    
T  29450337 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaaaccttacagtgctcctgctgacaaaggaaagcagaagatgggtgatgataggaggcc 29450436  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     |||||||| |||||||||||||| |||||||| || ||||||||    
T  29450437 taagaggagagatgctcctgttgagattgtttgctacaagtgtgg 29450481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 44658566 - 44658810
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||    
T  44658566 gacatcaagagagccattggatatcagcagatcagagtcttctctgagttggttaacaggtgtagaatctatgaagaagacaccaaagctcattacaaga 44658665  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||  | |||| ||||||||    
T  44658666 taatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgcggacaaaggaaagcagaagatgggtcatgataggaggcc 44658765  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| |||||||||||||| |||||||| || ||||||||    
T  44658766 caagaggagagatgctcctgttgagattgtttgctacaagtgtgg 44658810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 11203932 - 11204176
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| ||||| ||||||||||| |||||||||||||| ||||||||||| ||||| || |||||||||||||||||||||||||||||||| ||||    
T  11203932 gacatcaaaagagctattgggtatcagcagatcagagtcttctctgagttggtaaacagatgtagaatttatgaagaagacaccaaagctcattacaaga 11204031  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||| ||| |||||||||||| ||||| ||    
T  11204032 taatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttatagtgctcctgctgacaaaggaaagtagaagatgaatgatgataggagacc 11204131  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| |||||||||  ||| ||||||||||||||||||||    
T  11204132 caagaggagagatgctccttctgagattgtttgttataagtgtgg 11204176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 20 - 258
Target Start/End: Complemental strand, 20893597 - 20893359
Alignment:
Q  20 aagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatga 119  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||| ||||| ||||| |||||  |||||||||||||||||||||| ||||| ||||    
T  20893597 aagagagctattgggtatcagcagatcagagtcttttctgagttggtaaacagttgcaggatttacaaagaagacaccaaagctcattacaagataatga 20893498  T
Q  120 gtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagag 219  Q
    ||||||||||||| |||||||| |||| ||||||||||||||| ||||||||||||||||| |||||||||| |||||||||||| |||||||| |||||    
T  20893497 gtgagaggaggggcaagggacagcagagtcgtcctaagccttaaagtgctcctgctgacaaaggaaagcagaagatgaatgatgataggaggcctaagag 20893398  T
Q  220 gagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||| |||||||||  ||| ||||||||||| ||||||||    
T  20893397 gagagatgctccttctgagattgtttgttacaagtgtgg 20893359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 16151208 - 16150964
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||||||||||||  ||||||    ||| ||||| ||||| |  || |||||||| ||||| || ||||| ||||||||||| |||     
T  16151208 gacatcaagagagccattgggtatcagaagatcatgaacttctctgaattggtaagtagctgcagaatctatgaggaggacacaaaagctcattacaagg 16151109  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||  | ||||| || ||||| |||| |||||| ||||| || ||||||||| ||||||| |||||||||| | |||||||||||||||||||    
T  16151108 tgatgagtgatcgaaggggcaaaggacagcagagtcgtccgaagccgtatagtgctcctactgacaaaggaaagcagaagttgaatgatgagaggaggcc 16151009  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||    
T  16151008 caagaggagagatgctcctgttgatattgtttgctataagtgtgg 16150964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 16155354 - 16155110
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||||||||||||  ||||||    ||| ||||| ||||| |  || |||||||| ||||| || ||||| ||||||||||| |||     
T  16155354 gacatcaagagagccattgggtatcagaagatcatgaacttctctgaattggtaagtagctgcagaatctatgaggaggacacaaaagctcattacaagg 16155255  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||  | ||||| || ||||| |||| |||||| ||||| || ||||||||| ||||||| |||||||||| | |||||||||||||||||||    
T  16155254 tgatgagtgatcgaaggggcaaaggacagcagagtcgtccgaagccgtatagtgctcctactgacaaaggaaagcagaagttgaatgatgagaggaggcc 16155155  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||    
T  16155154 caagaggagagatgctcctgttgatattgtttgctataagtgtgg 16155110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 52 - 258
Target Start/End: Original strand, 14993105 - 14993311
Alignment:
Q  52 cttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgt 151  Q
    ||||||||| ||||| |  || ||||||||||||||||| || |  ||||||||||| ||| | ||||||||| | || || ||||||||||||| ||||    
T  14993105 cttttctgatttggtaagtagttgcagaatttatgaagaggatatgaaagctcattacaaggtgatgagtgagcgtagaggcaagggacaacagagtcgt 14993204  T
Q  152 cctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttata 251  Q
    |  ||||| || ||||| |||||||||||||| ||||||||  |||||||||||||||||||||||||||| |||||||||  ||||||||||||||  |    
T  14993205 ctgaagccgtatagtgcccctgctgacaagggtaagcagagattgaatgatgagaggaggcccaagaggagagatgctcctactgatattgtttgtttca 14993304  T
Q  252 agtgtgg 258  Q
    |||||||    
T  14993305 agtgtgg 14993311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 232
Target Start/End: Complemental strand, 15267348 - 15267130
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||||||||||||||| |||||  | || |||  ||| ||||| ||| | |  || ||||| |||||||| || ||||| ||||||||||| |||     
T  15267348 gacatcaagagagccattggttatcagaaaataagaaacttctctgatttgataagtagctgcaggatttatgaggaggacacgaaagctcattacaagg 15267249  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||  | || || ||||||||||||| |||||| ||||| || |||||||||||||||||||| ||||||||| | |||||||||||||||||    
T  15267248 tgatgagtgaacgcagaggcaagggacaacagagtcgtccgaagccgtatagtgctcctgctgacaagggtaagcagaggttaaatgatgagaggaggcc 15267149  T
Q  214 caagaggagggatgctcct 232  Q
    ||||||||| |||||||||    
T  15267148 caagaggagagatgctcct 15267130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 83 - 258
Target Start/End: Complemental strand, 18259944 - 18259769
Alignment:
Q  83 tatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagg 182  Q
    ||||||||||| || ||| ||||||| ||| | ||||||||| | ||||| |||||||| |||| || ||| ||||| || |||||||||||||||||||    
T  18259944 tatgaagaagatacaaaatctcattacaaggtgatgagtgagcgtaggggcaagggacagcagagtcatccgaagccgtatagtgctcctgctgacaagg 18259845  T
Q  183 gaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    | ||||||||| | |||||||||||||||||||||||||  |||||||||  | |||||||||| | |||||||||    
T  18259844 gtaagcagaggttaaatgatgagaggaggcccaagaggacagatgctcctactaatattgtttgctttaagtgtgg 18259769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 258
Target Start/End: Complemental strand, 15073862 - 15073687
Alignment:
Q  83 tatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagg 182  Q
    |||||||| || || ||||||||||||||| | ||||||||| | || ||||||||||| | || |||||| || || || ||||||||||||||||| |    
T  15073862 tatgaagaggatacaaaagctcattataaggtgatgagtgagcgtagaggtaagggacagctgagtcgtccgaaaccgtatagtgctcctgctgacaaag 15073763  T
Q  183 gaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
      || |||||  ||||||||||||||||||| | |||||| |||||||||  ||| ||||| ||||  ||||||||    
T  15073762 ttaaacagagactgaatgatgagaggaggcctaggaggagagatgctcctactgagattgtctgtttcaagtgtgg 15073687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 258
Target Start/End: Original strand, 51603570 - 51603736
Alignment:
Q  92 gacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcaga 191  Q
    ||||||||||||||||||||  | ||||||||| | || ||||||||||| |||||||||||||| || || ||||| ||  |||| ||||| |||||||    
T  51603570 gacaccaaagctcattataaagtgatgagtgagcgaagaggtaagggacatcagaatcgtcctaaaccgtatagtgccccgactgataagggtaagcaga 51603669  T
Q  192 ggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |  | ||||||||||||||||| |  | |||||||||||||| ||| || || || | |||||||||    
T  51603670 gacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgctttaagtgtgg 51603736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 258
Target Start/End: Original strand, 53750248 - 53750414
Alignment:
Q  92 gacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcaga 191  Q
    ||||||||||||||||||||  | ||||||||| | || ||||||||||| |||||||||||||| || || ||||| ||  |||| ||||| |||||||    
T  53750248 gacaccaaagctcattataaagtgatgagtgagcgaagaggtaagggacatcagaatcgtcctaaaccgtatagtgccccgactgataagggtaagcaga 53750347  T
Q  192 ggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |  | ||||||||||||||||| |  | |||||||||||||| ||| || || || | |||||||||    
T  53750348 gacttaatgatgagaggaggccgagtaagagggatgctcctgctgagatagtgtgctttaagtgtgg 53750414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 8602 - 8414
Alignment:
Q  20 aagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatga 119  Q
    |||||||| ||||| || ||  ||||| | ||||||||||||||||| | ||| |||||||||||||| || || |||||  ||||||| |||||| |||    
T  8602 aagagagcaattggttaccagaagatccgtgtcttttctgagttggtgagcagttgcagaatttatgaggaggataccaagactcattacaagattgtga 8503  T
Q  120 gtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagagg 208  Q
     |||| | |  |  || || || |||| |||||||||||||||||||||||||||||| ||||| || ||||| |||  ||||||||||    
T  8502 atgagcgaaaagccaaaggtcagcagagtcgtcctaagccttacagtgctcctgctgataagggtaaacagagaatggttgatgagagg 8414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 14684136 - 14683921
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||| ||||| || ||||| || |||||||| ||||| ||| | || ||||| || || ||||| || |||||||| || || || ||||| |||||||    
T  14684136 gacattaagagggcgattggataccaacagattagagtttttccagatttggtcaatagttgcaggatctatgaagaggatactaaggctcactataaga 14684037  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    || |||  ||||||| ||| |||||||| |||| |||||||||||| |||||||| |||||||| || || || |||||||||   ||||| ||| ||||    
T  14684036 ttgtgaacgagaggaagggcaagggacagcagagtcgtcctaagccatacagtgcccctgctgataaagggaaacagaggatggtcgatgataggcggcc 14683937  T
Q  214 caagaggagggatgct 229  Q
     |||| || |||||||    
T  14683936 taagaagaaggatgct 14683921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 15512 - 15670
Alignment:
Q  50 gtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatc 149  Q
    ||||||||||||||||| | ||| |||||||||||||| || || |||||  ||||||| |||||| ||| |||| | |  |  || || || |||| ||    
T  15512 gtcttttctgagttggtgagcagttgcagaatttatgaggaggataccaagactcattacaagattgtgaatgagcgaaaagtcaaaggtcagcagagtc 15611  T
Q  150 gtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagagg 208  Q
    |||||||| ||||||||||||||||||| ||||| || ||||| |||  ||||||||||    
T  15612 gtcctaagacttacagtgctcctgctgataagggtaaacagagaatggttgatgagagg 15670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 213
Target Start/End: Complemental strand, 14697592 - 14697474
Alignment:
Q  95 accaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagagga 194  Q
    |||||||||||||| ||  || ||| ||||||||  || ||||| || || | |||||| ||||||||||||||||||||||| ||||| ||||| ||      
T  14697592 accaaagctcattacaaagttgtgaatgagaggaaaggcaagggtcagcaaagtcgtccaaagccttacagtgctcctgctgataagggtaagcaaagat 14697493  T
Q  195 tgaatgatgagaggaggcc 213  Q
    |||||||||||||||||||    
T  14697492 tgaatgatgagaggaggcc 14697474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 213
Target Start/End: Complemental strand, 16219721 - 16219561
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    |||||||||||||| | ||| |||||||| ||||  ||||| || || | ||||||||||||| ||| ||||||||   | || || || | || |||||    
T  16219721 ttttctgagttggtgagcagctgcagaatctatgtggaagatacgaaggatcattataagattgtgaatgagaggaaaagcaaaggtcagccgagtcgtc 16219622  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||||||||||||||||| |||||||| || ||  | ||||| |||||||||||    
T  16219621 caaagccttacagtgctcctgctgataagggaaaacaaagagttaatgacgagaggaggcc 16219561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 213
Target Start/End: Complemental strand, 16223041 - 16222881
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    |||||||||||||| | ||| |||||||| ||||  ||||| || || | ||||||||||||| ||| ||||||||   | || || || | || |||||    
T  16223041 ttttctgagttggtgagcagctgcagaatctatgtggaagatacgaaggatcattataagattgtgaatgagaggaaaagcaaaggtcagccgagtcgtc 16222942  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||||||||||||||||| |||||||| || ||  | ||||| |||||||||||    
T  16222941 caaagccttacagtgctcctgctgataagggaaaacaaagagttaatgacgagaggaggcc 16222881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 233
Target Start/End: Complemental strand, 13513898 - 13513703
Alignment:
Q  38 caacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagg 137  Q
    ||||||||| |||| ||| |||| ||||| || || |||||||| ||||| || || |||| ||||||||| ||| || | | |||||||| |   ||||    
T  13513898 caacagatccgagtttttcctgatttggtgaatagctgcagaatctatgaggaggataccagagctcattacaaggttgttaatgagaggaagaccaagg 13513799  T
Q  138 gacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctg 233  Q
    | || |||| ||| ||||||||||| ||||| |||| ||| ||||| |||||||| |||  |||||| ||| |||| |||| || |||||||||||    
T  13513798 gccagcagagtcgccctaagccttatagtgcccctgttgataagggcaagcagagaatggttgatgataggcggcctaagaagaaggatgctcctg 13513703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 133 - 192
Target Start/End: Complemental strand, 14162923 - 14162864
Alignment:
Q  133 taagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagag 192  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||| || |||||    
T  14162923 taagggacaacagagtcgtcctaagccttacagtgctcctgctgataagggtaaacagag 14162864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 27903816 - 27903713
Alignment:
Q  155 aagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagt 254  Q
    ||||| |||| || |||||||||||| ||||| || ||  |||||||||||||| |||| | | |||| ||||||||||||||| |||||||||| ||||    
T  27903816 aagccctacaatgttcctgctgacaaaggaaaacaaagattgaatgatgagaggcggcctagggggagagatgctcctgttgatgttgtttgttacaagt 27903717  T
Q  255 gtgg 258  Q
    ||||    
T  27903716 gtgg 27903713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 19775236 - 19775402
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||||||||||||| | ||||| |||   || |||||||| || |||||||| || ||||| || || || ||||| || |||     
T  19775236 gacatcaagagggcgattgggtatcaacagctgagagtttttcaggatttggttaatagctgcagaatctacgaagaggatacgaaggctcactacaagg 19775335  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaa 180  Q
    |  ||| ||| |||| ||| |||||||| |||| |||||||||||| |||||||| || ||||||||    
T  19775336 tagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 19775402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 258
Target Start/End: Complemental strand, 13879618 - 13879437
Alignment:
Q  77 agaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctg 176  Q
    ||||||||||| || || || || |||||||||||| ||| ||||||| |||||   ||||| || ||   |||||| ||||| ||||||||||||| ||    
T  13879618 agaatttatgaggaggatacgaaggctcattataaggttaggagtgagcggaggaacaagggtcagcaaggtcgtccgaagccctacagtgctcctgatg 13879519  T
Q  177 acaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||| ||  |||| ||  |||||||||||||||| || ||||| || |||| | ||  ||| ||||||||||| ||||||||    
T  13879518 acaaagggtagcaaagattgaatgatgagaggagacctaagagaagagatgtttctactgagattgtttgttacaagtgtgg 13879437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 233
Target Start/End: Original strand, 16350188 - 16350401
Alignment:
Q  20 aagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatga 119  Q
    ||||| || ||||| || ||||||||| |||| ||| |||| ||||| ||||  || ||||| ||||| || ||||||||||||||||| ||| || | |    
T  16350188 aagagggcaattggataccaacagatccgagtttttcctgatttggtgaacaactgtagaatctatgaggaggacaccaaagctcattacaaggttgtaa 16350287  T
Q  120 gtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagag 219  Q
     |||| ||| |  |||||| || |||| ||| |||||||| || ||||| |||||||| ||||| || ||||| |||   ||||| ||| |||| ||||     
T  16350288 atgagcggaagactaagggccagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacagagaatggtcgatgataggcggcctaagaa 16350387  T
Q  220 gagggatgctcctg 233  Q
    || |||||||||||    
T  16350388 gaaggatgctcctg 16350401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 19635705 - 19635490
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || |||||||| |||||  | ||||| ||| | || |||||||| || ||||| || |||||||| || || || ||||| || |||     
T  19635705 gacatcaagagggcgattgggtaccaacaactgagagtttttccggatttggttaatagttgcaggatctatgaagaggatacgaaggctcactacaagg 19635606  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    |  ||| |||||||| ||| |||||||| |||| | |||||||||| |||||||| || ||||| || || || |||||||||   ||||| ||| ||||    
T  19635605 tagtgaatgagaggaagggcaagggacagcagagttgtcctaagccgtacagtgcccccgctgataaagggaaacagaggatggtcgatgataggcggcc 19635506  T
Q  214 caagaggagggatgct 229  Q
     |||| || |||||||    
T  19635505 taagaagaaggatgct 19635490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 40476609 - 40476446
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || |||||||| |||||| | ||||| |||   || ||||| || || ||||| || |||||||| || ||||| ||||| || ||||    
T  40476609 gacatcaagagggcgattgggtaccaacagctgagagtttttcaggatttggtcaatagctgcaggatctatgaagaggataccaaggctcactacaaga 40476510  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga 177  Q
    |  |||  ||||||| ||| |||||||| | || |||||||||||| |||||||| ||||||||    
T  40476509 tagtgaacgagaggaagggcaagggacagcggagtcgtcctaagccgtacagtgcccctgctga 40476446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 196
Target Start/End: Complemental strand, 8389933 - 8389799
Alignment:
Q  62 ttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagcctt 161  Q
    ||||||||||| ||||| || ||||| || || ||||| ||||| || ||| |  ||| ||| |||| ||| |||||||| |||| |||||||||||| |    
T  8389933 ttggttaacagctgcaggatctatgaggaggataccaaggctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgt 8389834  T
Q  162 acagtgctcctgctgacaagggaaagcagaggatg 196  Q
    ||||||| || ||||||||||| || |||| ||||    
T  8389833 acagtgcccccgctgacaagggtaaacagaagatg 8389799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 258
Target Start/End: Complemental strand, 8709166 - 8709005
Alignment:
Q  97 caaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatg 196  Q
    |||||||||||| ||| ||||||||||| |||||   || || || ||   |||||| ||||  || ||||||||||||||||| || ||||| ||  ||    
T  8709166 caaagctcattacaaggttatgagtgagcggaggaacaaaggtcagcaaggtcgtccgaagctctatagtgctcctgctgacaaagggaagcaaagattg 8709067  T
Q  197 aatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||||||||||||| || ||||| |  |||| ||||| ||| |||||||| || ||||||||    
T  8709066 aatgatgagaggagacctaagagaatagatgttcctgctgagattgtttgctacaagtgtgg 8709005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 8050066 - 8050229
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || |||||||| |||||| | ||||| |||   || ||||| || || ||||| || |||||||| || || || ||||| || |||     
T  8050066 gacatcaagagggcgattgggtaccaacagctgagagtttttcaggatttggtcaatagctgcaggatctatgaagaggatacgaaggctcactacaagg 8050165  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga 177  Q
    |  ||| ||| |||| ||| |||||||| |||| |||||||||||| |||||||| ||||||||    
T  8050166 tagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctgctga 8050229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 14300422 - 14300585
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||| || |||||| | ||||| |||   || ||||| || || ||||| || |||||||| || || || ||||| || |||     
T  14300422 gacatcaagagggcgattggataccaacagcttagagtttttcaagatttggtcaatagctgcaggatctatgaagaggatacgaaggctcactacaagg 14300521  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga 177  Q
    |  ||| |||||||| ||| |||||||| |||| |||||||||||| |||||||| ||||||||    
T  14300522 tagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctgctga 14300585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 232
Target Start/End: Original strand, 18604302 - 18604477
Alignment:
Q  57 ctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaa 156  Q
    |||| ||||| ||||| || || || |||||||| || |||| ||||||||| ||| || | | |||||||| |  |||||| || |||| ||| |||||    
T  18604302 ctgatttggtgaacagctgtaggatctatgaagaggataccatagctcattacaaggttgttaatgagaggaagactaagggccagcagagtcgccctaa 18604401  T
Q  157 gccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcct 232  Q
    |||||| | ||| |||||||| ||||| |||||||| |||   ||||| ||| |||| |||| || ||||||||||    
T  18604402 gccttataatgcccctgctgataagggcaagcagagaatggtcgatgataggcggcctaagaagaaggatgctcct 18604477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 180
Target Start/End: Original strand, 17091640 - 17091758
Alignment:
Q  62 ttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagcctt 161  Q
    ||||||||||| ||||| || ||||| || || ||||| ||||| || ||| |  ||| ||| |||| ||| |||||||| |||| |||||||||||| |    
T  17091640 ttggttaacagctgcaggatctatgaggaggataccaaggctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgt 17091739  T
Q  162 acagtgctcctgctgacaa 180  Q
    ||||||| || ||||||||    
T  17091740 acagtgcccccgctgacaa 17091758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 23959316 - 23959150
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||| ||||| || |||||||| |||||| | ||||| |||   || |||||||| || |||||||| || ||||| || || || ||||| || |||     
T  23959316 gacattaagagggcgattgggtaccaacagctgagagtttttcaggatttggttaatagctgcagaatctacgaagaggatacgaaggctcactacaagg 23959217  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaa 180  Q
    |  ||| ||| |||| ||| |||||||| |||| |||||||||||| |||||||| || ||||||||    
T  23959216 tagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 23959150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 12480169 - 12479954
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||| ||||| || |||||||| |||||| | ||||| |||   || |||||||| || ||||| || || ||||| || || || ||||| || |||     
T  12480169 gacattaagagggcgattgggtaccaacagctgagagtttttcaggatttggttaatagctgcaggatctacgaagaggatacgaaggctcactacaagg 12480070  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    |  ||| ||| |||| ||| |||||||| |||| |||||||||||| |||||||| || |||||||| || || |||| ||||   ||||  ||| ||||    
T  12480069 tagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaaagggaaacagaagatggtcgatgttaggcggcc 12479970  T
Q  214 caagaggagggatgct 229  Q
     ||||||| |||||||    
T  12479969 taagaggaaggatgct 12479954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 180
Target Start/End: Original strand, 16233483 - 16233601
Alignment:
Q  62 ttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagcctt 161  Q
    |||||||| || ||||| || || |||||||| || || ||||| || ||| |  ||| ||| |||| ||| |||||||| |||| |||||||||||| |    
T  16233483 ttggttaatagctgcaggatctacgaagaagatacgaaggctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgt 16233582  T
Q  162 acagtgctcctgctgacaa 180  Q
    ||||||| || ||||||||    
T  16233583 acagtgcccccgctgacaa 16233601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 180
Target Start/End: Complemental strand, 27714857 - 27714739
Alignment:
Q  62 ttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagcctt 161  Q
    |||||||| || |||||||| || ||||| || || || ||||| || ||| |  ||| ||| |||| ||| |||||||| |||| |||||||||||| |    
T  27714857 ttggttaatagctgcagaatctacgaagaggatacgaaggctcactacaaggtagtgaatgaaaggaagggcaagggacagcagagtcgtcctaagccgt 27714758  T
Q  162 acagtgctcctgctgacaa 180  Q
    ||||||| || ||||||||    
T  27714757 acagtgcccccgctgacaa 27714739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 165; Significance: 2e-88; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 24367836 - 24367592
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||||||||||||||| ||||| |||||||||||||| | |||||||||||||||||| ||||| ||| |||||||||||||||||||||| ||||    
T  24367836 gacatcaagagagccattggatatcagcagatcagagtcttctatgagttggttaacaggtgtagaatctatcaagaagacaccaaagctcattacaaga 24367737  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||  |||||| ||||||||    
T  24367736 taatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgggtgatgataggaggcc 24367637  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| ||||||| |||||| |||||||| || ||||||||    
T  24367636 caagaggagagatgctcatgttgagattgtttgctacaagtgtgg 24367592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 17 - 258
Target Start/End: Original strand, 10465696 - 10465937
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||| || || ||||||||  |||| ||||| || ||||||||||| | ||| ||||| || ||||| |||||||| ||||||||||| ||| | |    
T  10465696 atcaagagggctatagggtatcagaagattagagttttctctgagttggtgagcagctgcaggatatatgaggaagacacaaaagctcattacaaggtga 10465795  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||||||||||||||  ||||||||||| |||||||||||    
T  10465796 tgagtgagaggaggggtaagggacagcagagtcgtcctaagccttacaatgctcttgctgacaagggaaagcagaaaatgaatgatgataggaggcccaa 10465895  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||||| |||| ||||| ||| ||||| ||||| ||||||||    
T  10465896 gaggagagatgttcctgctgagattgtctgttacaagtgtgg 10465937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 18798126 - 18797882
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||| || ||  ||||||||  ||| ||||||||||| |  || |||||||| |||||||| |||||  |||||||||| |||     
T  18798126 gacatcaagagggctattggataccagaagatcagaaacttctctgagttggtaagtagctgcagaatctatgaagaggacacagaagctcattacaagg 18798027  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||  | || || |||||||| |||| |||||| ||||| || |||||||||||||||||||||||||| ||  |||||||||||||||||||    
T  18798026 tgatgagtgaccgcagaggcaagggacagcagagtcgtccgaagccgtatagtgctcctgctgacaagggaaagcaaagattgaatgatgagaggaggcc 18797927  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  18797926 caagaggagggatgctcctgtggatattgtttgttataagtgtgg 18797882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 19438438 - 19438194
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||||||||||||  ||||||||  ||||||||||||||| | ||| || || || |||||||| || || || ||| |||| |||     
T  19438438 gacatcaagagagccattgggtatcagaagatcagaaacttttctgagttggtaagcagctgtaggatctatgaagaggatacgaaggcttattacaagg 19438339  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    |  ||||||| ||||| ||||||||||| |||| |||||| ||||| || |||||||||||||||||||| ||||||||| | |||||||||||||||||    
T  19438338 tagtgagtgaaaggagaggtaagggacagcagagtcgtccgaagccatatagtgctcctgctgacaagggtaagcagaggttaaatgatgagaggaggcc 19438239  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| |||||||||| ||| || ||| |||| ||||||||    
T  19438238 caagaggagagatgctcctgctgagatcgttcgttacaagtgtgg 19438194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 98 - 258
Target Start/End: Original strand, 24515343 - 24515503
Alignment:
Q  98 aaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatga 197  Q
    ||||||||||| ||| | ||||||||  | || || ||||||||||||| ||||||||| || || ||||||||||||||||||||||| |||||| |||    
T  24515343 aaagctcattacaaggtgatgagtgaccgcagaggcaagggacaacagagtcgtcctaaaccatatagtgctcctgctgacaagggaaaacagaggctga 24515442  T
Q  198 atgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24515443 atgatgagaggaggcccaagaggagagatgctcctgttgatattgtttgttataagtgtgg 24515503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 255
Target Start/End: Original strand, 14376761 - 14377002
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||| ||||||||||||  ||||||||  ||| ||||| |||||||  || ||||| || ||||| || ||||| ||||||||||| |||     
T  14376761 gacatcaagagagacattgggtatcagaagatcagaaacttctctgaattggttagtagctgcaggatctatgaggaggacacgaaagctcattacaagg 14376860  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||  | ||| | |||||||| |||| |||||| ||||| || ||||||||||||||||||||||| |||||| |||||||||||||||| ||    
T  14376861 tgatgagtgatcgaaggagcaagggacagcagagtcgtccgaagccgtatagtgctcctgctgacaagggaaaacagaggttgaatgatgagaggagacc 14376960  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtg 255  Q
    ||| ||||| ||||||||||||||| ||||||| || |||||    
T  14376961 caataggagagatgctcctgttgatgttgtttgctacaagtg 14377002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 258
Target Start/End: Original strand, 21566839 - 21567080
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||| |||||||| |||||  |||||||    |||||||||||||| | ||| || ||||| ||||| |||||  | ||||||||||| ||| | |    
T  21566839 atcaagagggccattggctatcagaagatcaggactttttctgagttggtaagcagctgtagaatctatgaggaagattcaaaagctcattacaaggtga 21566938  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||| ||||| ||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||  |  ||||||||||||| ||||||||    
T  21566939 tgagtgagcggaggagtaagggacaacagagtcgtcctaagccgtacagtgcccctgctgacaagggaaagcaacgactgaatgatgagagaaggcccaa 21567038  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||||| |||||||||| ||| || ||||| | |||||||||    
T  21567039 gaggagagatgctcctgctgaaatagtttgctttaagtgtgg 21567080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 53 - 258
Target Start/End: Complemental strand, 25771241 - 25771036
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    |||||||||||||| | ||| || || ||||||||||| || || |||||||||||||   | ||||||||| | || |||||||||||||||| |||||    
T  25771241 ttttctgagttggtaagcagctgtaggatttatgaagaggatacaaaagctcattatagagtgatgagtgagcgcagaggtaagggacaacagagtcgtc 25771142  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataa 252  Q
    |  | || || ||||||||||||||||| || || |||||| ||||||||||||||||||| |||||||| |||||||||  ||| ||||| ||||  ||    
T  25771141 cgtaaccgtatagtgctcctgctgacaaaggtaaacagaggctgaatgatgagaggaggcctaagaggagagatgctcctactgagattgtctgtttcaa 25771042  T
Q  253 gtgtgg 258  Q
    ||||||    
T  25771041 gtgtgg 25771036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 246
Target Start/End: Complemental strand, 19456456 - 19456227
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||||||||  ||||| |||||| |||| |||   || || ||||| || | ||| ||||| || |||||||| || || || |||||||| ||| |      
T  19456456 atcaagagaggtattggctatcaaaagataagaaatttctcagagttagtaagcagctgcaggatatatgaagaggatactaaggctcattacaagctgg 19456357  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||  | || |||||||||||||||| ||||||||| || || ||||||||||||||||| ||||| || ||| ||||||||||||||||||||||    
T  19456356 tgagtgaacgcagaggtaagggacaacagagtcgtcctaaaccatatagtgctcctgctgacaaaggaaaacaaaggctgaatgatgagaggaggcccaa 19456257  T
Q  217 gaggagggatgctcctgttgatattgtttg 246  Q
    |||||| ||| |||||  ||| ||||||||    
T  19456256 gaggagagatactcctactgagattgtttg 19456227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 246
Target Start/End: Complemental strand, 19466601 - 19466372
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||||||||  ||||| |||||| |||| |||   || || ||||| || | ||| ||||| || |||||||| || || || |||||||| ||| |      
T  19466601 atcaagagaggtattggctatcaaaagataagaaatttctcagagttagtaagcagctgcaggatatatgaagaggatactaaggctcattacaagctgg 19466502  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||  | || |||||||||||||||| ||||||||| || || ||||||||||||||||| ||||| || ||| ||||||||||||||||||||||    
T  19466501 tgagtgaacgcagaggtaagggacaacagagtcgtcctaaaccatatagtgctcctgctgacaaaggaaaacaaaggctgaatgatgagaggaggcccaa 19466402  T
Q  217 gaggagggatgctcctgttgatattgtttg 246  Q
    |||||| ||| |||||  ||| ||||||||    
T  19466401 gaggagagatactcctactgagattgtttg 19466372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 213
Target Start/End: Original strand, 30677908 - 30678068
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    |||||||| || || | ||| ||||| || ||||| ||||| ||||||||| |||| ||| ||||||||||| ||||||||||| | || ||||||||||    
T  30677908 ttttctgaattagtgagcagttgcaggatctatgaggaagataccaaagctaattacaaggttatgagtgagcggaggggtaagagtcagcagaatcgtc 30678007  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||||  ||||||||||| ||  | ||||| ||| |||||||||||||||||||    
T  30678008 caaagccttacaacgctcctgctgataaatgtaagcaaagggtgaatgatgagaggaggcc 30678068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 210
Target Start/End: Original strand, 34642430 - 34642626
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| |||||||| |||||| ||||||||    ||||||||||| | |  || |||||||| |||||||||||  | |  |||||||| |||     
T  34642430 gacatcaagagggccattggctatcaaaagatcagaactctttctgagttgataagtagctgcagaatctatgaagaagattcaagggctcattacaagg 34642529  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggag 210  Q
    | ||||||||  ||||||| ||||||||||||| |||||||||||| || |||||||||||||  |||||||||||  |  |||||||||| |||||    
T  34642530 tgatgagtgaacggaggggcaagggacaacagagtcgtcctaagccgtatagtgctcctgctggtaagggaaagcaacgactgaatgatgaaaggag 34642626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 5836076 - 5836291
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||| ||||| || |||||||| ||| |||| ||||| ||| | || |||||||| || ||||| ||||| ||||| || ||||||||||| || ||||    
T  5836076 gacattaagagggcgattgggtaccaatagattagagtttttccggatttggttaatagctgcaggatttacgaagaggataccaaagctcactacaaga 5836175  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
     | ||| |||| ||| ||| ||||||||||||| |||||||||||| || ||||| |||||||| || || || |||||||||   ||||| ||| | ||    
T  5836176 ctgtgaatgagcggaagggcaagggacaacagagtcgtcctaagccgtatagtgcccctgctgataaagggaaacagaggatggtcgatgataggcgacc 5836275  T
Q  214 caagaggagggatgct 229  Q
    ||||| || |||||||    
T  5836276 caagaagaaggatgct 5836291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 143 - 258
Target Start/End: Complemental strand, 21474907 - 21474792
Alignment:
Q  143 cagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattg 242  Q
    |||| |||||| ||||| || |||||||||||||||||||| ||||||| | ||||||||||||||||||| | |||||| |||||||||  ||| ||||    
T  21474907 cagagtcgtccgaagccgtatagtgctcctgctgacaagggtaagcagatgctgaatgatgagaggaggcctaggaggagagatgctcctactgagattg 21474808  T
Q  243 tttgttataagtgtgg 258  Q
    ||||||  ||||||||    
T  21474807 tttgtttcaagtgtgg 21474792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 22829234 - 22829397
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||| || |||||| | ||||| ||| | || ||||| || || ||||| || |||||||| || ||||| ||||| |||||||    
T  22829234 gacatcaagagggcgattggataccaacagcttagagtttttccagatttggtcaatagctgcaggatctatgaagaggataccaaggctcactataaga 22829333  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga 177  Q
    || |||  ||||||| ||| ||||||||||||| |||||||||||| |||||||| ||||||||    
T  22829334 ttgtgaacgagaggaagggcaagggacaacagagtcgtcctaagccgtacagtgcccctgctga 22829397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 52 - 221
Target Start/End: Complemental strand, 18660317 - 18660148
Alignment:
Q  52 cttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgt 151  Q
    |||||||||  |||| | ||| |||||||| ||||| || || || ||||||||||| |||  | ||||||||||||  |||||| | || || | ||||    
T  18660317 cttttctgaactggtgagcagttgcagaatctatgaggaggatacgaaagctcattacaaggctgtgagtgagaggaaaggtaagagtcagcaaagtcgt 18660218  T
Q  152 cctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagagga 221  Q
    || ||||||||||||||||||||||| |||||  |||||||| | |||||||||||| | ||||||||||    
T  18660217 ccaaagccttacagtgctcctgctgataagggtgagcagagggttaatgatgagaggggacccaagagga 18660148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 52 - 251
Target Start/End: Complemental strand, 23081821 - 23081622
Alignment:
Q  52 cttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgt 151  Q
    |||||||||| | || | ||| |||||||||||||| || || || || |||||||| |||||| ||| |||| |||  |  || || || |||| ||||    
T  23081821 cttttctgagctagtgagcagttgcagaatttatgaggaggatactaaggctcattacaagattgtgaatgagcggaaagtcaaaggtcagcagagtcgt 23081722  T
Q  152 cctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttata 251  Q
    || ||||||||||||||| ||||||| || |||||||| ||  | |||||||||||| |||| | || ||  |||||||||||||| |||||||||||||    
T  23081721 ccaaagccttacagtgctgctgctgataaaggaaagcaaagagttaatgatgagaggcggcctaggaagaaagatgctcctgttgagattgtttgttata 23081622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 258
Target Start/End: Original strand, 19486178 - 19486383
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    |||||||| ||||| | ||| || ||||| || ||||| || |||||||||||||| ||| ||||||||||| |||||   || || || ||   ||||     
T  19486178 ttttctgaattggtgagcagttgtagaatctacgaagaggataccaaagctcattacaaggttatgagtgagcggaggaacaaaggccagcaaggtcgtt 19486277  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataa 252  Q
    | ||||| |||||||||||||||||||| || ||||| ||  |||||||||||||||| || ||||| || |||| ||||  ||| |||||||| || ||    
T  19486278 cgaagccctacagtgctcctgctgacaaagggaagcaaagattgaatgatgagaggagacctaagagaagagatgttcctactgagattgtttgctacaa 19486377  T
Q  253 gtgtgg 258  Q
    ||||||    
T  19486378 gtgtgg 19486383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 18326254 - 18326089
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    |||||||||||||| |  || || ||||||||||| |||   | ||||||||||||||||||||||| |||| | | |||||||   ||||||| |||||    
T  18326254 ttttctgagttggtaagtagctggagaatttatgaggaa---atcaaagctcattataagattatgaatgagcgaaagggtaagaatcaacagagtcgtc 18326158  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagagga 221  Q
    ||||| ||||||||||||| ||| | |||||  || || || |||||||||||| | | ||||||||||    
T  18326157 ctaagtcttacagtgctccagctaataagggtgagaagggggtgaatgatgagacgggacccaagagga 18326089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 258
Target Start/End: Complemental strand, 19881829 - 19881588
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||| |||||||| |||||  ||||||||    |||| |||||| | |  || |||||||| |||||||||||  | || |||||||| ||| | |    
T  19881829 atcaagagggccattggttatcagaagatcagaactctttccgagttgataagtagctgcagaatctatgaagaagattcaaaggctcattacaaggtga 19881730  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||  ||||||| |||| |||||| | |||||||||||| ||||| || |||||||  |||||||||||  |  ||||||||||||| || |||||    
T  19881729 tgagtgaacggaggggcaaggaacaacaaagtcgtcctaagccgtacagcgcccctgctggtaagggaaagcaacgactgaatgatgagagaagacccaa 19881630  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    | | || ||  |||||| ||| || ||||| | |||||||||    
T  19881629 gggaagagacactcctgctgagatagtttgctttaagtgtgg 19881588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 2871650 - 2871813
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||| || |||||| | ||||| |||   || ||||| || || ||||| || |||||||| || ||||| ||||| || ||||    
T  2871650 gacatcaagagggcgattggataccaacagcttagagtttttcaggatttggtcaatagctgcaggatctatgaagaggataccaaggctcactacaaga 2871749  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga 177  Q
    |  ||| |||||||| ||| ||||||||||||| |||||||||||  |||||||| ||||||||    
T  2871750 tagtgaatgagaggaagggcaagggacaacagagtcgtcctaagctgtacagtgcccctgctga 2871813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 171
Target Start/End: Complemental strand, 27206055 - 27205898
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| ||  ||||||| |||||| | ||||| |||   || |||||||| || ||||| || |||||||| || || || ||||| || |||     
T  27206055 gacatcaagagggcgcttgggtaccaacagctgagagtttttcaagacttggttaatagctgcaggatctatgaagaggatacgaaggctcactacaagg 27205956  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcc 171  Q
    |  ||| |||||||| |||||||||||| |||| |||||||||||| |||||||||||    
T  27205955 tagtgaatgagaggaagggtaagggacagcagagtcgtcctaagccgtacagtgctcc 27205898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 171
Target Start/End: Original strand, 27243173 - 27243330
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| ||  ||||||| |||||| | ||||| |||   || |||||||| || ||||| || |||||||| || || || ||||| || |||     
T  27243173 gacatcaagagggcgcttgggtaccaacagctgagagtttttcaagacttggttaatagctgcaggatctatgaagaggatacgaaggctcactacaagg 27243272  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcc 171  Q
    |  ||| |||||||| |||||||||||| |||| |||||||||||| |||||||||||    
T  27243273 tagtgaatgagaggaagggtaagggacagcagagtcgtcctaagccgtacagtgctcc 27243330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 15462772 - 15462528
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||||||||||||||| |||||  |||||||  | || || |||||||| |  || || || |||||||| || || || ||||||||||| |||     
T  15462772 gacatcaagagagccattggatatcagaagatcaggattttctcggagttggtgagtagctgtaggatttatgaggaggatacgaaagctcattacaagg 15462673  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | |||||||||| ||||  |||||| ||    | ||| || ||||| ||||||||||||||| |||| || || |||||  ||||||||||||||  |||    
T  15462672 tgatgagtgagaagaggaataagggtcagagtagtcgcccgaagccctacagtgctcctgctaacaaaggcaaacagagattgaatgatgagaggcagcc 15462573  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     |   |||| ||  ||||||||||| |||| ||||| ||||||||    
T  15462572 tagagggagagagactcctgttgatgttgtgtgttacaagtgtgg 15462528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 95 - 258
Target Start/End: Complemental strand, 16813995 - 16813832
Alignment:
Q  95 accaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagagga 194  Q
    ||||||||||| |||||||||| || |||| |||||   ||||| |||||   |||||| || || |||||||||||||   |||| ||  | |||||      
T  16813995 accaaagctcactataagattaggaatgagcggaggaacaagggtcaacaaggtcgtccgaaaccctacagtgctcctgtaaacaaaggggaacagagat 16813896  T
Q  195 tgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||||||||||||||| || |||||||| |||| ||||| ||| |||||||| || ||||||||    
T  16813895 tgaatgatgagaggagacctaagaggagagatgatcctgctgagattgtttgctacaagtgtgg 16813832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 177
Target Start/End: Complemental strand, 25115937 - 25115822
Alignment:
Q  62 ttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagcctt 161  Q
    |||||||| || ||||| || |||||||| || ||||| ||||| || |||||  |||  ||||||| ||| |||||||| |||| |||||||||||| |    
T  25115937 ttggttaatagctgcaggatctatgaagaggataccaaggctcactacaagatagtgaacgagaggaagggcaagggacagcagagtcgtcctaagccgt 25115838  T
Q  162 acagtgctcctgctga 177  Q
    ||||||| ||||||||    
T  25115837 acagtgcccctgctga 25115822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 28313063 - 28312897
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| ||  ||||||| |||||| | ||||| |||   || |||||||| || ||||| || |||||||| || || || ||||| || |||     
T  28313063 gacatcaagagggcgcttgggtaccaacagctgagagtttttcaggacttggttaatagctgcaggatctatgaagaggatacgaaggctcactacaagg 28312964  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaa 180  Q
    |  ||| ||| |||| |||||||||||| |||| |||||||||||| |||||||| || ||||||||    
T  28312963 tagtgaatgaaaggaagggtaagggacagcagagtcgtcctaagccgtacagtgcccccgctgacaa 28312897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 8720731 - 8720794
Alignment:
Q  195 tgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||||||||||||| |||||||| |||| ||||| ||| |||||||| || ||||||||    
T  8720731 tgaatgatgagaggaggcctaagaggagagatgatcctgatgagattgtttgctacaagtgtgg 8720794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 196
Target Start/End: Original strand, 27558874 - 27558996
Alignment:
Q  74 tgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctg 173  Q
    |||||||||||||| || ||||||| ||||||||| ||| || | | |||| ||| |  |||||| || |||| ||| |||||||| || ||||| ||||    
T  27558874 tgcagaatttatgaggaggacaccagagctcattacaaggttgttaatgagcggaagactaagggccagcagagtcgccctaagccctatagtgcccctg 27558973  T
Q  174 ctgacaagggaaagcagaggatg 196  Q
    |||| ||||| || |||||||||    
T  27558974 ctgataagggcaaacagaggatg 27558996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 28260045 - 28260211
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| ||  |||||||||||||| | ||||| |||   || |||||||| || ||||| || |||||||| || || || ||||| || |||     
T  28260045 gacatcaagagggcgcttgggtatcaacagctgagagtttttcaggacttggttaatagctgcaggatctatgaagaggatacgaaggctcactacaagg 28260144  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaa 180  Q
    |  |||  || |||| ||||||||| || |||| |||||||||||| |||||||| || ||||||||    
T  28260145 tagtgaacgaaaggaagggtaaggggcagcagagtcgtcctaagccgtacagtgcccccgctgacaa 28260211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 28285871 - 28285705
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| ||  |||||||||||||| | ||||| |||   || |||||||| || ||||| || |||||||| || || || ||||| || |||     
T  28285871 gacatcaagagggcgcttgggtatcaacagctgagagtttttcaggacttggttaatagctgcaggatctatgaagaggatacgaaggctcactacaagg 28285772  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaa 180  Q
    |  |||  || |||| ||||||||| || |||| |||||||||||| |||||||| || ||||||||    
T  28285771 tagtgaacgaaaggaagggtaaggggcagcagagtcgtcctaagccgtacagtgcccccgctgacaa 28285705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 28338794 - 28338960
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| ||  |||||||||||||| | ||||| |||   || |||||||| || ||||| || |||||||| || || || ||||| || |||     
T  28338794 gacatcaagagggcgcttgggtatcaacagctgagagtttttcaggacttggttaatagctgcaggatctatgaagaggatacgaaggctcactacaagg 28338893  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaa 180  Q
    |  |||  || |||| ||||||||| || |||| |||||||||||| |||||||| || ||||||||    
T  28338894 tagtgaacgaaaggaagggtaaggggcagcagagtcgtcctaagccgtacagtgcccccgctgacaa 28338960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 168
Target Start/End: Original strand, 29589287 - 29589441
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||| || |||||| | ||||| |||   || |||||||| || ||||| || ||||| || || ||||| ||||| || |||     
T  29589287 gacatcaagagggcgattggataccaacagctgagagtttttcaggacttggttaatagctgcaggatctatgaggaggataccaaggctcactacaagg 29589386  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgc 168  Q
    |  ||| |||||||| ||| |||||||| |||| |||||||||||| ||||||||    
T  29589387 tagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgc 29589441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 182
Target Start/End: Original strand, 18182276 - 18182401
Alignment:
Q  57 ctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaa 156  Q
    ||||| |||| | ||| |||||||||||||| |  || || || |||||||| ||| || ||| ||||||||  ||||| || || |||| || ||||||    
T  18182276 ctgagctggtgagcagttgcagaatttatgaggcggatactaaggctcattagaaggttgtgaatgagaggaaaggtaaaggtcagcagagtcatcctaa 18182375  T
Q  157 gccttacagtgctcctgctgacaagg 182  Q
    ||||||| ||||||||||||| ||||    
T  18182376 gccttaccgtgctcctgctgataagg 18182401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 233
Target Start/End: Complemental strand, 21765242 - 21765029
Alignment:
Q  20 aagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatga 119  Q
    ||||| || ||||| || ||||||||| |||| ||| |||| ||||| ||||| || | ||| ||||| || ||||||||||||||||| ||| || |||    
T  21765242 aagagggcaattggataccaacagatccgagtttttgctgatttggtgaacagctgtaaaatctatgaggaggacaccaaagctcattacaaggttgtga 21765143  T
Q  120 gtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagag 219  Q
     |||| |||    | |||| || |||| ||| |||||||| || ||||| |||||||| ||||| ||  |||| |||   ||||| ||| |||| ||||     
T  21765142 atgagtggaacactgagggccagcagagtcgccctaagccctatagtgcccctgctgataagggcaattagagaatggtcgatgataggcggcctaagaa 21765043  T
Q  220 gagggatgctcctg 233  Q
    || |||||||||||    
T  21765042 gaaggatgctcctg 21765029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 207
Target Start/End: Original strand, 23084802 - 23084863
Alignment:
Q  146 aatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagag 207  Q
    ||||||||||||||||||||||||||| |||| ||||| || || ||  |||||||||||||    
T  23084802 aatcgtcctaagccttacagtgctcctcctgataagggtaaacaaagagtgaatgatgagag 23084863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 243
Target Start/End: Complemental strand, 22437251 - 22437076
Alignment:
Q  68 aacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtg 167  Q
    ||||| ||||| ||||||||||| || ||||| |||||||| |||||| ||| |||| | | |  |||||| || |||| ||| ||||||||||| || |    
T  22437251 aacagttgcaggatttatgaagaggataccaaggctcattacaagattgtgaatgagcgaaagactaagggccagcagagtcgccctaagccttatagcg 22437152  T
Q  168 ctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgt 243  Q
    | |||||||| ||||  ||  ||||||||   ||||| ||| |||| |||| || ||||| ||||| ||| |||||    
T  22437151 cccctgctgataaggccaaatagaggatggtcgatgataggcggcctaagaagaaggatgttcctgctgagattgt 22437076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1426 (Bit Score: 161; Significance: 6e-86; HSPs: 1)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 1310 - 1554
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| ||||| ||||||||||| ||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| || |    
T  1310 gacatcaaaagagctattgggtatcagcagataagagtcttctctgagttggttaacaggtgtagaatttatgaagaagacaccaaagctcattacaaca 1409  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||| ||||| |||||| ||||||||    
T  1410 taatgagtgagaggaggggtaagggacagcagaatcgtcataagccttacagtgctcctgctgacaaaggaaagcagaagatgagtgatgataggaggcc 1509  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     |||||||| |||||||||  ||| ||||||||||| ||||||||    
T  1510 taagaggagagatgctccttctgagattgtttgttacaagtgtgg 1554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 160; Significance: 2e-85; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 23 - 258
Target Start/End: Original strand, 514065 - 514300
Alignment:
Q  23 agagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtg 122  Q
    ||||| ||||||||||| |||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| |||||||    
T  514065 agagctattgggtatcagcagatcagagtcttctctgagttggtaaacaggtgtagaatttatgaagaagacaccaaagctcattacaagataatgagtg 514164  T
Q  123 agaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggag 222  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||| ||| |||||||||||| |||||||| ||||||||    
T  514165 agaggaggggtaagggacagcagaatcgtcctaagccttaaagtgctcctgctgacaaaggaaagaagaagatgaatgatgataggaggcctaagaggag 514264  T
Q  223 ggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     |||||||||  ||| ||||||||||| ||||||||    
T  514265 agatgctccttctgagattgtttgttacaagtgtgg 514300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 213
Target Start/End: Complemental strand, 442115 - 442054
Alignment:
Q  152 cctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    |||||||||||||||||||||||||| ||||| || || ||  ||||||||| ||| |||||    
T  442115 cctaagccttacagtgctcctgctgataagggtaaacaaagattgaatgatgggagaaggcc 442054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1845 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: scaffold1845
Description:

Target: scaffold1845; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 1007 - 1251
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||| |||||||| ||||||||||| ||||||||| |||| ||||||||||| ||||| ||||| ||||| ||||||||||||||||||||||| ||||    
T  1007 gacattaagagagctattgggtatcagcagatcagattcttctctgagttggtaaacagttgcaggatttacgaagaagacaccaaagctcattacaaga 1106  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||| ||    
T  1107 taatgagtgagaggaggggaaagggacagaagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcagaagatgaatgatgataggagacc 1206  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| |||||||||| ||| ||||||||||| ||||||||    
T  1207 caagaggagagatgctcctgctgagattgtttgttacaagtgtgg 1251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 153; Significance: 3e-81; HSPs: 2)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 11446 - 11690
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||    
T  11446 gacattaaaagagccattgggtatcaacagatcagagtcttttcggagttggttaacaggtgtaggatttatgaagaagacaccaaagctcattacaaga 11545  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||| ||||  |||||| |||| |||    
T  11546 taatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacattgctcttgctgacaaaggaaagcagaagatgggtgatgataggaagcc 11645  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| ||||| || | ||| ||||| || || ||||||||    
T  11646 caagaggagagatgcaccagatgagattgtatgatacaagtgtgg 11690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 74 - 232
Target Start/End: Complemental strand, 5978 - 5823
Alignment:
Q  74 tgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctg 173  Q
    ||||| || |||||||| || || |||||| |||| ||| | ||||||||| | || |||||||||||||| | |||||| ||||| || ||    ||||    
T  5978 tgcaggatatatgaagaggatacgaaagcttattacaaggtgatgagtgagcgcagaggtaagggacaacatagtcgtccgaagccgtatagc---cctg 5882  T
Q  174 ctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcct 232  Q
    |||||||||| ||||||||  ||||||||||||||||||  |||||||| |||||||||    
T  5881 ctgacaagggtaagcagagattgaatgatgagaggaggcttaagaggagagatgctcct 5823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 1062 - 818
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| ||||| |||  |||||| ||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  1062 gacatcaaaagagctattcagtatcagcagatcagaatcttctctgagttggttaacagatgcagaatttatgaagaagacaccaaagctcattacaaga 963  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||| | ||| |||||| ||||||||    
T  962 taatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagtagaagttgattgatgataggaggcc 863  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     |||||||| |||||||||  ||| ||||||||||| ||||||||    
T  862 taagaggagagatgctccttctgagattgtttgttacaagtgtgg 818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2165 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold2165
Description:

Target: scaffold2165; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 14 - 254
Target Start/End: Original strand, 506 - 746
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||| |||| ||| ||||||||||| ||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||| | |||| ||||    
T  506 gacattaagatagctattgggtatcagcagattagagtcttctctgagttggttaacaggtgtagaatttatgaagaagacaccaaagtttattacaaga 605  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||||||||    
T  606 taatgagttagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctattgacaaaggaaagcagaagatgaatgatgataggaggcc 705  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagt 254  Q
     |||||||| |||||||||  ||| ||||||||||| ||||    
T  706 taagaggagagatgctccttctgagattgtttgttacaagt 746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 20 - 258
Target Start/End: Original strand, 66817 - 67055
Alignment:
Q  20 aagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatga 119  Q
    |||||||| ||||||||||| ||||||||||| || ||||| ||||| ||||| ||||| |||||||| |||||||||||||||||||| ||||| ||||    
T  66817 aagagagctattgggtatcagcagatcagagtgttctctgatttggtaaacagctgcaggatttatgaggaagacaccaaagctcattacaagataatga 66916  T
Q  120 gtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagag 219  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||| |||||| ||| |||||||||||| ||||| ||||||||    
T  66917 gtgagaggaggggcaagggacagcagaatcgtcctaagccttacagtgctcctgttgacaaaggaaagtagatgatgaatgatgataggagacccaagag 67016  T
Q  220 gagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||| |||||||||   || ||||||||||||||||||||    
T  67017 gagagatgctccttccgagattgtttgttataagtgtgg 67055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 20 - 258
Target Start/End: Complemental strand, 11572 - 11334
Alignment:
Q  20 aagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatga 119  Q
    |||||||  ||||||||||| |||||||||||||| ||||||||||| ||||| ||||| |||||||| |||||||||||||||||||| ||||| ||||    
T  11572 aagagagttattgggtatcagcagatcagagtcttctctgagttggtaaacagctgcaggatttatgaggaagacaccaaagctcattacaagataatga 11473  T
Q  120 gtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagag 219  Q
    ||||||||||||||||||| || |||| ||||||||||||||| ||||||||||||||||| ||||||||||   |||||||||| ||||| || |||||    
T  11472 gtgagaggaggggtaagggtcagcagattcgtcctaagccttatagtgctcctgctgacaaaggaaagcagattttgaatgatgataggagtcctaagag 11373  T
Q  220 gagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||| |||||||||  ||| ||||||||||| ||||||||    
T  11372 gagagatgctccttctgagattgtttgttacaagtgtgg 11334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 134; Significance: 8e-70; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 14 - 191
Target Start/End: Original strand, 13757 - 13934
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||||||||| ||| | ||||| |||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||    
T  13757 gacatcaagagagctattagatatcagcagatcagagtcttctctgagttggttaacaggtgtagaatctatgaagaagacaccaaagctcattaaaaga 13856  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcaga 191  Q
    | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  13857 taatgagtgagaggaggggtaagggacagcagaatcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 13934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 17 - 258
Target Start/End: Original strand, 33078 - 33319
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||| ||||| |||||||||||| |||| ||| | || ||||||||||| | ||| ||||| || ||||| |||||||||||||||||||| ||| | |    
T  33078 atcaaaagagctattgggtatcaaaagattagaattttctctgagttggtaagcagctgcaggatatatgaggaagacaccaaagctcattacaaggtga 33177  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||| | |||||||||||||| |||| ||||||||| || |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  33178 tgagtgagcgaaggggtaagggacagcagagtcgtcctaaaccatacagtgctcctgctgacaaaggaaaacagaggatgaatgatgagaggaggcccaa 33277  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||||| |||||||||||||| ||||||||||  ||||||||    
T  33278 gaggagagatgctcctgttgaaattgtttgtttcaagtgtgg 33319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 191
Target Start/End: Complemental strand, 30511 - 30334
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| ||||| ||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  30511 gacatcaatagagctattgggtatcagcagatcagagtcttctctgagttggttaacagttgcagaatttatgaagaagacaccaaagctcattacaaga 30412  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcaga 191  Q
      ||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  30411 caatgagtgagaggaggggcaagggacagcagagtcgtcctaagccttacagtgctcctgctgacaaaggaaagcaga 30334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 126; Significance: 5e-65; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 17 - 258
Target Start/End: Original strand, 1193 - 1434
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||| ||||| || ||||||||  ||||||||||||| ||||||||||| | ||| || || || ||||| |||||||| ||||||||||| ||| | |    
T  1193 atcaaaagagctatagggtatcagaagatcagagtcttctctgagttggtaagcagctgtaggatatatgaggaagacacaaaagctcattacaaggtga 1292  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    ||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||| |||||||||||    
T  1293 tgagtgagaggagaggtaagggacagcagagtcgtcctaagccttacagtgctcctgctgacaagggaaaacagaaaatgaatgatgataggaggcccaa 1392  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||||| |||||||||| ||| ||||| ||||| ||||||||    
T  1393 gaggagagatgctcctgctgagattgtctgttacaagtgtgg 1434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 20 - 172
Target Start/End: Complemental strand, 17834 - 17682
Alignment:
Q  20 aagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatga 119  Q
    |||||||| ||||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  17834 aagagagctattgggtatcagcagatcagagtcttctctgagttggtaaacagttgcagaatttatgaagaagacaccaaagctcattataagataatga 17735  T
Q  120 gtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcct 172  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  17734 gtgagaggaggggtaagggacagcagagtcgtcctaagccttacagtgctcct 17682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 8165 - 8409
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||||||||||||  |||||| |  ||| ||||| ||||| |   | |||||||| ||||| || ||||  ||||||||||| |||     
T  8165 gacatcaagagagccattgggtatcagaagatcaaaaacttctctgaattggtaagttgctgcagaatctatgaggaggacatgaaagctcattacaagg 8264  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||  | ||||| ||||||||||||| |||||| ||||| || |||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  8265 tgatgagtgaccgcaggggcaagggacaacagagtcgtccgaagccgtatagtgctcctgctgacaagggaaagcagaggctgaatgatgagaggagacc 8364  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||    
T  8365 caagaggagagatgctcatgttgatattgtttgttataagtgtgg 8409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 18379 - 18623
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||||||||||||  |||||| |  ||| ||||| ||||| |   | |||||||| ||||| || ||||  ||||||||||| |||     
T  18379 gacatcaagagagccattgggtatcagaagatcaaaaacttctctgaattggtaagttgctgcagaatctatgaggaggacatgaaagctcattacaagg 18478  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||  | ||||| ||||||||||||| |||||| ||||| || |||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  18479 tgatgagtgaccgcaggggcaagggacaacagagtcgtccgaagccgtatagtgctcctgctgacaagggaaagcagaggctgaatgatgagaggagacc 18578  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||    
T  18579 caagaggagagatgctcatgttgatattgtttgttataagtgtgg 18623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 60 - 258
Target Start/End: Original strand, 30075 - 30273
Alignment:
Q  60 agttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagcc 159  Q
    ||||||| | ||| ||||| || ||||| || ||||| |||||||||||  |||| |||||||||||||||||||||||| |||||||||||||||| ||    
T  30075 agttggtaagcagctgcaggatatatgaggaggacacaaaagctcattactagataatgagtgagaggaggggtaagggataacagaatcgtcctaaacc 30174  T
Q  160 ttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||||||||||||||| || || |||| |||||||||||| ||||||||||||||||  |||||||||| ||| ||||||||||||||||||||    
T  30175 ttacagtgctcctgctgacaaagggaaacagaagatgaatgatgacaggaggcccaagaggaaagatgctcctgctgagattgtttgttataagtgtgg 30273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 109; Significance: 6e-55; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 98286 - 98530
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||||||||||||  ||||||||  ||||||||||||||| | ||| || || ||  ||||||| || || || |||||||| |||     
T  98286 gacatcaagagagccattgggtatcagaagatcagaaacttttctgagttggtaagcagctgtaggatcaatgaagaggatacgaaggctcattacaagg 98385  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | |||||||| ||||| |||||||||||||||| |||||| ||||| || ||||||| |||||||||||| ||||||||| | |||||||||||||||||    
T  98386 taatgagtgaaaggagaggtaagggacaacagagtcgtccgaagccatatagtgctcatgctgacaagggtaagcagaggttaaatgatgagaggaggcc 98485  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||| |||| |||||||||| ||| || |||||||| ||||||||    
T  98486 caagtggagagatgctcctgctgagatcgtttgttacaagtgtgg 98530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 232
Target Start/End: Complemental strand, 176519 - 176370
Alignment:
Q  83 tatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagg 182  Q
    |||||||| || || ||||||||||||||| | ||||||||| | || ||||||||||| |||| |||||| || || || |||||||||||  |||| |    
T  176519 tatgaagaggatacaaaagctcattataaggtgatgagtgagcgtagaggtaagggacagcagagtcgtccgaaaccgtatagtgctcctgccaacaaag 176420  T
Q  183 gaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcct 232  Q
      || |||||  ||||||||||||||||||| | |||||| |||||||||    
T  176419 ttaaacagagactgaatgatgagaggaggcctaggaggagagatgctcct 176370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 106; Significance: 4e-53; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 17 - 258
Target Start/End: Complemental strand, 252217 - 251976
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||| ||||| ||| |||||||  |||| ||| | || ||||| ||||| | ||| ||||| || ||||| |||||||||||||||||||| ||| | |    
T  252217 atcaaaagagctattaggtatcagaagattagaattttctctgaattggtaagcagctgcaggatatatgaggaagacaccaaagctcattacaaggtga 252118  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||  ||||| || | |||||||||||| |||||||||||    
T  252117 tgagtgagaggaggggtaagggacaacataatcgtcctaaaccttacagtgctcctgctgccacaggaaaacataagatgaatgatgataggaggcccaa 252018  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||||| ||||||| |||||| ||||| ||||  ||||||||    
T  252017 gaggagagatgctcttgttgagattgtgtgtttcaagtgtgg 251976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 38 - 248
Target Start/End: Original strand, 229579 - 229789
Alignment:
Q  38 caacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagg 137  Q
    ||||||||| |||| ||| |||| |||||||| || |||||||||||||| || || ||||| |||||||| ||| || ||| |||||||| |  |||||    
T  229579 caacagatccgagtttttcctgatttggttaatagctgcagaatttatgaggaggataccaaggctcattacaaggttgtgaatgagaggaagactaagg 229678  T
Q  138 gacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttga 237  Q
      || |||| ||| |||||||| || ||||| |||||||| ||||| || ||||| |||   ||||| ||| |||| || | || |||||||||||  ||    
T  229679 accagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacagagaatggtcgatgataggcggcctaataagaaggatgctcctgcgga 229778  T
Q  238 tattgtttgtt 248  Q
     ||||||||||    
T  229779 gattgtttgtt 229789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 105; Significance: 2e-52; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 17187 - 17431
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||| ||||| |||||||| ||| |||| ||||| ||||| ||  | ||||| || ||||| || ||||| |||||||||||||||     
T  17187 gacatcaagagagccatagggtagcaacagattagaatcttctctgatttggtaaatcgttgcaggatctatgaggaggacacaaaagctcattataagg 17286  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||| | || ||||||||||| |||| ||||||||| || |||||||| ||||||||||||||||| || ||  |||||||||||||||||||    
T  17287 tgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaaacaaagactgaatgatgagaggaggcc 17386  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     || ||||| |||||||||| ||| || |||||||||||||||||    
T  17387 gaataggagagatgctcctgctgagatagtttgttataagtgtgg 17431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 76 - 258
Target Start/End: Original strand, 4614 - 4796
Alignment:
Q  76 cagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgct 175  Q
    |||||| ||||| || ||||| ||| ||||||||||| | ||||||||| | || ||||||||||| |||| ||||||||| || |||||||| |||  |    
T  4614 cagaatctatgaggaggacacaaaacctcattataaggtgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctttt 4713  T
Q  176 gacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||||||||||||| ||  ||||||||||||||||||| || ||||| |||||||||| ||| || || ||||||||||||||    
T  4714 gacaagggaaagcaaagactgaatgatgagaggaggccaaataggagagatgctcctgctgagatagtctgttataagtgtgg 4796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 105; Significance: 2e-52; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 11609 - 11853
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||| ||||||||| |||| | | | || ||||| ||||| | ||| ||||| || |||||||| ||||| || ||||||||||||     
T  11609 gacatcaagagagccatagggtatcaaaagattaaaattttctctgatttggtaagcagctgcaggatatatgaagaggacactaaggctcattataagg 11708  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||||| || ||||||||||| |||| ||||||||| || || ||||||||||||||||| |||||||||||  | |||||||||||||||||    
T  11709 tgatgagtgagagaagaggtaagggacagcagagtcgtcctaaaccatatagtgctcctgctgacaaaggaaagcagagacttaatgatgagaggaggcc 11808  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| |||||||||  ||| || |||||||| ||||||||    
T  11809 caagaggagagatgctcctactgagatcgtttgttacaagtgtgg 11853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 1655 - 1899
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||||||||||||  |||| ||| | || ||||| ||||| |  ||  |||  || ||||||||||| || ||||||||||| |||     
T  1655 gacatcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagcagcatgatatatgaagaagatactaaagctcattacaagg 1754  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||| | || ||||||||||| |||| || |||||| || || ||||||||||||||||| ||||| |||||| |||||||||||||||||||    
T  1755 tgatgagtgagcgcagaggtaagggacagcagagtcatcctaaaccatatagtgctcctgctgacaaaggaaaacagaggctgaatgatgagaggaggcc 1854  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||  |||||||||| ||| |||||||| || ||||||||    
T  1855 caagaggatagatgctcctgctgaaattgtttgctacaagtgtgg 1899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 155 - 258
Target Start/End: Complemental strand, 70832 - 70729
Alignment:
Q  155 aagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagt 254  Q
    ||||| |||| || |||||||||||| ||||| || ||  |||||||||||||| |||| | | |||| ||||||||||||||| |||||||||| ||||    
T  70832 aagccctacattgttcctgctgacaaaggaaaacaaagattgaatgatgagaggcggcctagggggagagatgctcctgttgatgttgtttgttacaagt 70733  T
Q  255 gtgg 258  Q
    ||||    
T  70732 gtgg 70729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 102; Significance: 9e-51; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 39038 - 39280
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||||||||| ||  |||| ||| |  ||||||||||||| |  || ||||| || ||||| ||||| || ||||||||||| |||     
T  39038 gacatcaagagagccattgggtaccagaagattagaat--tttctgagttggtgagtagctgcaggatatatgaggaagatactaaagctcattacaagg 39135  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||  | || ||||||||||| |||| || |||||| || || |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  39136 tgatgagtgaacgaagaggtaagggacagcagagtcttcctaaaccatatagtgctcctgctgacaagggaaagcagaggctgaatgatgagaggaggcc 39235  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| |||||||||| ||| |||||||| || ||||||||    
T  39236 caagaggagagatgctcctgctgagattgtttgctacaagtgtgg 39280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 213
Target Start/End: Complemental strand, 5478 - 5317
Alignment:
Q  52 cttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgt 151  Q
    ||||||||||||||| | ||  |||||||| ||||| ||||| || || |||||||| ||| || ||| ||||||||  || ||||| || || | ||||    
T  5478 cttttctgagttggtgagcaattgcagaatatatgaggaagatactaaggctcattacaaggttgtgaatgagaggaaaggcaagggtcagcaaagtcgt 5379  T
Q  152 cctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    || ||||||||| ||||||||||||| ||||| || || ||  | |||||||||| ||||||    
T  5378 ccaaagccttacggtgctcctgctgataagggcaaacaaagagttaatgatgagatgaggcc 5317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 258
Target Start/End: Complemental strand, 15001 - 14781
Alignment:
Q  38 caacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagg 137  Q
    ||||||||| |||| ||| |||| || || || || |||||||| || || ||||| ||||| ||||||||  || || ||| |||| ||| |   ||||    
T  15001 caacagatccgagtttttcctgatttagtgaatagctgcagaatctacgaggaagataccaaggctcattactaggttgtgaatgagcggaagaccaagg 14902  T
Q  138 gacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttga 237  Q
    | || |||| ||| ||||||||||| ||||| |||||||| ||||| || ||||| |||   ||||| | | |||| |||| || |||||||||||  ||    
T  14901 gccagcagagtcgccctaagccttatagtgcccctgctgataagggcaaacagagaatggtcgatgatatgcggcctaagaagaaggatgctcctgcgga 14802  T
Q  238 tattgtttgttataagtgtgg 258  Q
     ||||||||||  ||||||||    
T  14801 gattgtttgtttcaagtgtgg 14781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 1105 - 861
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||||||||||||  |||| ||| | || ||||||||||| |  || |||||||| ||||| || || |  || |||||||| |||     
T  1105 gacatcaagagagccattgggtatcagaagattagaattttctctgagttggtgagtagctgcagaatatatgaggaggataataaggctcattacaagg 1006  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||| | || |||||||||||||||| ||||||||| || || |||||||||||||||||||| ||||||||  |||||||||||||||||||    
T  1005 tgatgagtgagcgcagaggtaagggacaacagagtcgtcctaaaccatatagtgctcctgctgacaagggtaagcagagattgaatgatgagaggaggcc 906  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     |||||||| |||||||||| ||| |||||||| || ||||||||    
T  905 taagaggagagatgctcctgctgagattgtttgctacaagtgtgg 861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 101; Significance: 4e-50; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 1555 - 1795
Alignment:
Q  18 tcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattat 117  Q
    ||||||| |||||||| |||||  ||||||||   |||||||||||||| | ||| |||||||| ||||| |||||  | ||||||||||| ||| | ||    
T  1555 tcaagagggccattggctatcagaagatcagaactttttctgagttggtaagcagctgcagaatctatgaggaagattcaaaagctcattacaaggtgat 1654  T
Q  118 gagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaag 217  Q
    ||||||| |||||||||||||| |||||| |||||||||||| |||||||| ||||||||||||||||||||  |  ||||||||||||| |||||||||    
T  1655 gagtgagcggaggggtaagggaaaacagagtcgtcctaagccgtacagtgcccctgctgacaagggaaagcaacgactgaatgatgagagaaggcccaag 1754  T
Q  218 aggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||| |||||| ||| ||| ||  |||| |||||||||||    
T  1755 aggagagatgctactgctgaaataatttgctataagtgtgg 1795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 258
Target Start/End: Original strand, 251 - 492
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||| |||||||| |||||  ||||||||   |||||||||||||| | ||| |||||||| || || |||||  | ||||||||||| ||| | |    
T  251 atcaagagggccattggctatcagaagatcagaactttttctgagttggtaagcagctgcagaatctacgaggaagattcaaaagctcattacaaggtga 350  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||| ||||||||||||||||||||| |||||||||||| |||||| | ||||||||||||||||||||  || ||||||||||||| || |||||    
T  351 tgagtgagcggaggggtaagggacaacagagtcgtcctaagccgtacagtccccctgctgacaagggaaagcaacggctgaatgatgagagaagacccaa 450  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||||| |||||||||  ||| || ||||| | |||||||||    
T  451 gaggagagatgctcctactgagatagtttgctttaagtgtgg 492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 255
Target Start/End: Complemental strand, 5654 - 5413
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||||||| |||||||||||||  |||| ||| | || ||||||||||| |  || ||||| || ||||||||||| || ||||||||||| |||     
T  5654 gacatcaagagaaccattgggtatcagaagataagaattttctctgagttggtgagtagctgcaggatatatgaagaagatactaaagctcattacaagg 5555  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||  | || ||||| |||||||||| ||||||||| || || |||||||||||||| |||||||| |||||| |||||||||||||||||||    
T  5554 tgatgagtgaacgaagaggtaaaggacaacagagtcgtcctaaaccatatagtgctcctgctgataagggaaaacagaggttgaatgatgagaggaggcc 5455  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtg 255  Q
    || |||||| |||||||||| ||| |||||||| || |||||    
T  5454 cacgaggagagatgctcctgctgagattgtttgctacaagtg 5413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 258
Target Start/End: Complemental strand, 203979 - 203738
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||||||||| ||||| |||||||| ||| | || ||||| ||||| |   | ||||| || ||||| || ||||||||||||||||||||| | |    
T  203979 atcaagagagccatagggtaccaacagattagaattttctctgatttggtaagtcgttgcaggatctatgaggaggacaccaaagctcattataaggtga 203880  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||| | || ||||||||||| |||| |||||||||||| |||||||| |||||||||||||| ||||||||  ||||||||||||||||||||      
T  203879 tgagtgagcgaagaggtaagggacagcagagtcgtcctaagccgtacagtgcccctgctgacaagggtaagcagagactgaatgatgagaggaggcccgt 203780  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     ||||| |||||||||| ||| || ||||||| |||||||||    
T  203779 taggagagatgctcctggtgagatagtttgttttaagtgtgg 203738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 424909 - 424746
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctg-agttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataag 112  Q
    ||||| ||||| || ||||| ||||||||||| ||||| ||||||| | |||||||| || |||||||| ||||| || || ||||| |||||||| |||    
T  424909 gacattaagagggcgattggatatcaacagattagagt-ttttctggatttggttaatagctgcagaatctatgaggaggataccaaggctcattacaag 424811  T
Q  113 attatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga 177  Q
    ||  ||| |||| ||| ||| |||||||| || | |||||||||||| |||| ||| ||||||||    
T  424810 atggtgaatgagcggaagggcaagggacagcatagtcgtcctaagccgtacaatgcccctgctga 424746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 53126 - 53370
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||||||||||||| |||| ||| |||| || || ||||| |  || ||||| || ||||| ||||||||||| ||||||||||||     
T  53126 gacatcaagagagccattgggtatcaaaagattagaatcttctcggatttggtgagtagctgcaggatatatgaggaagacaccaaggctcattataagg 53225  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||| | || | ||||||||| ||   ||||||||| || |||||||| |||||||||||||||||||||||  |||||||||||||||||||    
T  53226 tgatgagtgagcgaagagataagggacatcaagttcgtcctaaaccatacagtgcccctgctgacaagggaaagcagagattgaatgatgagaggaggcc 53325  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||| ||||| ||||||| || ||  || |||||||| ||||||||    
T  53326 caataggagagatgctcttgctgggatcgtttgttacaagtgtgg 53370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 40659 - 40415
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||| ||||| ||| | || ||| |||| ||| | ||||| |   | |||||||| ||| |||| ||||| |||||||||||||||     
T  40659 gacatcaagagagccatagggtaccaatatattagaatcttctctaatttggtaagtcgttgcagaatctataaagaggacacaaaagctcattataagg 40560  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||| | || |||| ||||||||||| ||||||||| || |||||||| |||||||||||||||||||| ||  |||||||||||||||||||    
T  40559 tgatgagtgagcgaagaggtatgggacaacagagtcgtcctaaaccgtacagtgcccctgctgacaagggaaagcaaagactgaatgatgagaggaggcc 40460  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     || ||||| |||||||||| ||| || || ||||||||||||||    
T  40459 gaataggagagatgctcctgctgagatagtctgttataagtgtgg 40415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 196
Target Start/End: Original strand, 17080 - 17234
Alignment:
Q  42 agatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggaca 141  Q
    ||||| |||| || |||||| |||| | ||| ||||| || ||||| || || |||||  || |||| |||||| ||| |||| |||  | |||||| ||    
T  17080 agatccgagttttctctgagctggtgagcagttgcaggatctatgaggaggataccaagacttattacaagattgtgaatgagcggaaagctaagggtca 17179  T
Q  142 acagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatg 196  Q
    ||||| ||| ||||||||||| ||||| |||||||| ||||| || |||||||||    
T  17180 acagagtcgccctaagccttatagtgcccctgctgataagggcaaacagaggatg 17234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 93; Significance: 2e-45; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 64305 - 64549
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||| |||||||||||||| ||| | || ||||| ||||| |   | ||||| || ||||| || ||| | |||||||||||||||     
T  64305 gacatcaagagagccatagggtatcaacagattagaattttctctgatttggtaagtcgttgcaggatatatgaggaggactcaaaagctcattataagg 64404  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||| | || ||||||||||| |||| ||||||||| || || ||||| || ||||||||||||||||||||  |||||||||| ||||||||    
T  64405 tgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtatagtgccccggctgacaagggaaagcagagactgaatgatgaaaggaggcc 64504  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     || |||||||||||||||| ||| || |||||||| ||||||||    
T  64505 gaataggagggatgctcctgctgagatagtttgttacaagtgtgg 64549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 48883 - 49127
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||| |||||||| ||||| ||| | || ||||| ||||| |   | ||||| || ||||| || ||| | |||||||||||||||     
T  48883 gacatcaagagagccatagggtatcagcagattagaattttctctgatttggtaagtcgttgcaggatatatgaggaggactcaaaagctcattataagg 48982  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||| | || ||||||||||| |||| ||||||||| || || ||||| || ||||||||||||||||||||  |||||||||| ||||||||    
T  48983 tgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtatagtgccccggctgacaagggaaagcagagactgaatgatgaaaggaggcc 49082  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     || |||||||||||||||| ||| || |||||||| ||||||||    
T  49083 gaataggagggatgctcctgctgagatagtttgttacaagtgtgg 49127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 57917 - 58161
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||| |||||||| ||||| ||| | || ||||| ||||| |   | ||||| || ||||| || ||| | |||||||||||||||     
T  57917 gacatcaagagagccatagggtatcagcagattagaattttctctgatttggtaagtcgttgcaggatatatgaggaggactcaaaagctcattataagg 58016  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||| | || ||||||||||| |||| ||||||||| || || ||||| || ||||||||||||||||||||  |||||||||| ||||||||    
T  58017 tgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtatagtgccccggctgacaagggaaagcagagactgaatgatgaaaggaggcc 58116  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     || |||||||||||||||| ||| || |||||||| ||||||||    
T  58117 gaataggagggatgctcctgctgagatagtttgttacaagtgtgg 58161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 232
Target Start/End: Complemental strand, 30222 - 30007
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||||||||||||||| |||||  | || |||  ||| ||||| ||||| | ||| || || |||||||| || ||||| ||||||||||| ||| | |    
T  30222 atcaagagagccattggttatcagaaaataagaaacttctctgatttggtaagcagctgtaggatttatgaggaggacacgaaagctcattacaaggtga 30123  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||| | || || |||||||| |||| |||||| ||||| || |||||||||||||||||||| ||||||||  | ||||||||||||||||||||    
T  30122 tgagtgagcgtagaggcaagggacagcagagtcgtccgaagccgtatagtgctcctgctgacaagggtaagcagagtttaaatgatgagaggaggcccaa 30023  T
Q  217 gaggagggatgctcct 232  Q
    |||||| |||| ||||    
T  30022 gaggagagatgttcct 30007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 258
Target Start/End: Original strand, 5963 - 6204
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||||||||| || || |||||||| ||| | || ||||| ||||| |     ||||| |||||||| || ||||||||||||||||||||  | |    
T  5963 atcaagagagccataggataccaacagattagaattttctctgatttggtaagtcattgcaggatttatgaggaggacaccaaagctcattataaagtga 6062  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||  | || |||||||||||||||| |||||||||||| |||||||| |||||||||||||| ||||| ||  ||||||||||||||||||| ||    
T  6063 tgagtgaacgaagaggtaagggacaacagagtcgtcctaagccgtacagtgcccctgctgacaagggtaagcaaagactgaatgatgagaggaggccgaa 6162  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     ||||| ||||||||||| || || ||||||| |||||||||    
T  6163 taggagagatgctcctgtcgagatagtttgttttaagtgtgg 6204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 258
Target Start/End: Original strand, 193 - 434
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||||||||||||||| |||||  |||| ||| |||| ||||| ||||| |  || || || || || || || ||||||||||||||||||||| | |    
T  193 atcaagagagccattggctatcagaagataagaatcttctctgatttggtgagtagttgtaggatctacgaggaggacaccaaagctcattataaggtga 292  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||  | || |||||||||||||||| ||  |||||||| |||||||| ||||||||||||||||||||||   ||||||||||||||||||||||    
T  293 tgagtgaacgaagaggtaagggacaacagagtcaccctaagccgtacagtgcccctgctgacaagggaaagcagatattgaatgatgagaggaggcccaa 392  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     ||||| |||||||||| ||| || |||||||| || |||||    
T  393 taggagagatgctcctgctgagatcgtttgttacaaatgtgg 434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 74 - 258
Target Start/End: Complemental strand, 21355 - 21171
Alignment:
Q  74 tgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctg 173  Q
    |||||||| ||||| ||||| |  ||||||||||| ||| | ||||||||| | |  || ||||||||  ||| ||||||||| || || ||||| ||||    
T  21355 tgcagaatatatgaggaagataggaaagctcattacaaggtgatgagtgagcgtaaaggcaagggacagtagagtcgtcctaaaccgtatagtgcccctg 21256  T
Q  174 ctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||| ||||| |||||| |||||||||||||||||||||||||||| |||||| ||| ||| |||||||| || ||||||||    
T  21255 ctgacaaaggaaaacagaggctgaatgatgagaggaggcccaagaggagagatgcttctgctgagattgtttgctacaagtgtgg 21171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 258
Target Start/End: Complemental strand, 263824 - 263583
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||||||||| ||||| |||||||| ||| | || ||||| ||||| |   | ||||| || ||||| || |||||||||| |||||||||| | |    
T  263824 atcaagagagccatagggtaccaacagattagaattttctctgatttggtaagtcgttgcaggatctatgaggaggacaccaaagttcattataaggtga 263725  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||| | || ||||||||||| |||| ||||| |||||| |||||||| |||||||||||||| ||||||||  ||||||||||||||||||||      
T  263724 tgagtgagcgaagaggtaagggacagcagagtcgtcttaagccgtacagtgcccctgctgacaagggtaagcagagactgaatgatgagaggaggcccgt 263625  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     ||||| |||||||||| ||| || ||||||| |||||||||    
T  263624 taggagagatgctcctgctgagatagtttgttttaagtgtgg 263583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 22723 - 22479
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||||||||||||  |||| ||| | || ||||| ||||| |  || |||||||| ||||| || ||||| ||||||||||||| |     
T  22723 gacatcaagagagccattgggtatcagaagataagaattttctctgatttggtaagtagctgcagaatctatgaggaggacacaaaagctcattatatgg 22624  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||| | | ||||||||||||||  ||| || |||||| || |||||||| ||||| ||||| ||||| || ||  |||||||||||||||||||    
T  22623 tgatgagtgggcgaaggggtaagggacagtagagtcttcctaaaccatacagtgcccctgccgacaaaggaaatcaaagactgaatgatgagaggaggcc 22524  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||| ||||| |||||||||||||| || |||||||| ||||||||    
T  22523 caataggagagatgctcctgttgagatcgtttgttacaagtgtgg 22479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 258
Target Start/End: Original strand, 164107 - 164348
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||||||||||||||||||  |||||||| | || || |||||||| |  || ||||| || ||||| ||  |||| ||||||||||| ||| | |    
T  164107 atcaagagagccattgggtatcagaagatcagaattttctccgagttggtgagtagctgcaggatatatgaggagaacacgaaagctcattacaaggtga 164206  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||  | || ||||| ||||| |||| |||||||||  | |||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||    
T  164207 tgagtgaacgaagaggtaaaggacagcagagtcgtcctaaatcatacagtgcccctgctgacaagggaaaacagaggttgaatgatgagaggaggcccaa 164306  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     ||||| || ||||||| ||| || |||||||| ||||||||    
T  164307 taggagagacgctcctgctgagatcgtttgttacaagtgtgg 164348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 15673 - 15429
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||||||||||||  ||||||||   || ||||| ||||| |  || |||||||| ||||| || || || ||||||||||| |||     
T  15673 gacatcaagagagccattgggtatcagaagatcagaaatttctctgaattggtaagtagctgcagaatctatgaggaggaaacgaaagctcattacaagg 15574  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||  | | | | || |||||||||| |||||| ||||| || |||||||||||||||||| ||||||||||| | |||||||||||||||||    
T  15573 tgatgagtgatcgaatgagcaaaggacaacagagtcgtccgaagccgtatagtgctcctgctgacaagcgaaagcagaggttaaatgatgagaggaggcc 15474  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||| ||||| |||||||||| ||| ||| | || |||||||||||    
T  15473 caataggagagatgctcctgctgagattttctgctataagtgtgg 15429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 319844 - 319600
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||||||||||||  |||| |    ||| ||||| ||||| |  || |||||||||||||| || ||||| ||||||||||| |||     
T  319844 gacatcaagagagccattgggtatcagaagataaagaacttctctgaattggtaagtagctgcagaatttatgaggaggacacgaaagctcattacaagg 319745  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | || |||||  | ||||| || ||||| |||| |||||| ||||| || |||||||||||||||||||  ||||||||| |||||||||||||||||||    
T  319744 tgataagtgatcgaaggggcaaaggacagcagagtcgtccgaagccgtatagtgctcctgctgacaaggataagcagaggctgaatgatgagaggaggcc 319645  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||| ||||| |||||||||| ||  |||||||| || ||||||||    
T  319644 caataggagagatgctcctgctgggattgtttgctacaagtgtgg 319600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 166 - 258
Target Start/End: Complemental strand, 326155 - 326064
Alignment:
Q  166 tgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||||||||| ||||||| ||||||||| ||||||||||||||||| |||| ||||| |||||||||| ||| |||||||| || ||||||||    
T  326155 tgctcctgctaacaagggtaagcagaggctgaatgatgagaggagg-ccaataggagagatgctcctgctgagattgtttgctacaagtgtgg 326064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 83 - 258
Target Start/End: Original strand, 5674 - 5849
Alignment:
Q  83 tatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagg 182  Q
    ||||||||||| || ||||||||||| ||| | ||||||||| | || || |||||||| |||| || ||| ||||| || |||||||||||||||||||    
T  5674 tatgaagaagatacgaaagctcattacaaggtgatgagtgagcgtagaggcaagggacagcagagtcatccgaagccgtatagtgctcctgctgacaagg 5773  T
Q  183 gaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    | ||||||||  |||||||||||||||||||||||||||| |||||||||  ||||||||||| ||| ||||||||    
T  5774 gtaagcagagactgaatgatgagaggaggcccaagaggagagatgctcctactgatattgtttattacaagtgtgg 5849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 83 - 232
Target Start/End: Original strand, 1083 - 1232
Alignment:
Q  83 tatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagg 182  Q
    |||||||| || || ||||||||||| ||| | ||||||||| | || || ||||||||||||| |||||| ||||| ||||||||||||||||||||||    
T  1083 tatgaagaggatacgaaagctcattacaaggtgatgagtgagcgtagaggcaagggacaacagagtcgtccgaagccatacagtgctcctgctgacaagg 1182  T
Q  183 gaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcct 232  Q
    | || |||||| |||||||||||||||||||||||||||| |||||||||    
T  1183 gtaaacagaggctgaatgatgagaggaggcccaagaggagagatgctcct 1232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 83 - 232
Target Start/End: Complemental strand, 8276 - 8127
Alignment:
Q  83 tatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagg 182  Q
    |||||||| || || ||||||||||| ||| | ||||||||| | || || ||||||||||||| |||||| ||||| ||||||||||||||||||||||    
T  8276 tatgaagaggatacgaaagctcattacaaggtgatgagtgagcgtagaggcaagggacaacagagtcgtccgaagccatacagtgctcctgctgacaagg 8177  T
Q  183 gaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcct 232  Q
    | || |||||| |||||||||||||||||||||||||||| |||||||||    
T  8176 gtaaacagaggctgaatgatgagaggaggcccaagaggagagatgctcct 8127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 3226 - 2988
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||||||||||||  |||| ||| | || ||||| ||||| |  || ||||| || ||||||||||| || ||||||||||| |||     
T  3226 gacatcaagagagccattgggtatcagaagataagaattttctctgatttggtgagtagctgcaggatatatgaagaagatactaaagctcattacaagg 3127  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||| ||      || |||||  |||| |||| || |||||| || || ||||||||||||||||| ||||| |||||| |||||||||||||||||||    
T  3126 tgatgtgt------agaggtaaatgacagcagagtcatcctaaaccgtatagtgctcctgctgacaaaggaaaacagaggttgaatgatgagaggaggcc 3033  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| |||||||||||||| |||||||| || ||||||||    
T  3032 caagaggagagatgctcctgttgagattgtttgctacaagtgtgg 2988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 17 - 258
Target Start/End: Complemental strand, 50703 - 50462
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||| || ||||| |||||  |||| |||  ||||||||||||||| | ||| || || || ||||||||||| || ||||||||||| ||| | |    
T  50703 atcaagagggctattggttatcagaagataagaaacttttctgagttggtaagcagctgtaggatctatgaagaagatacgaaagctcattacaaggtga 50604  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||| | || || |||||||| |||| | |||| ||||| || ||||| |||||||||||||| ||||| ||   |||||||||||||||||||||    
T  50603 tgagtgagcgtagaggcaagggacagcagagtggtccgaagccgtatagtgcccctgctgacaagggtaagcatagatggaatgatgagaggaggcccaa 50504  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||||| |||||||||  ||||||||||||||  ||||||||    
T  50503 gaggagagatgctcctactgatattgtttgtttcaagtgtgg 50462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 53 - 258
Target Start/End: Complemental strand, 70670 - 70465
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    |||||||| ||||| | ||| || ||||| |||||||| || |||||||||||||||||  | ||||||||| | || |||||||||||||||| |||||    
T  70670 ttttctgaattggtaagcagctgtagaatctatgaagaggataccaaagctcattataaagtgatgagtgagcgcagaggtaagggacaacagagtcgtc 70571  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataa 252  Q
    | || || || ||||||||||||||||| || || |||||| ||||||||||||||||||| |||||||| |||||||||  ||| ||| |||| | |||    
T  70570 cgaaaccgtatagtgctcctgctgacaaaggtaaacagaggctgaatgatgagaggaggcctaagaggagagatgctcctactgagattatttgctttaa 70471  T
Q  253 gtgtgg 258  Q
    ||||||    
T  70470 gtgtgg 70465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 74 - 258
Target Start/End: Complemental strand, 7579 - 7395
Alignment:
Q  74 tgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctg 173  Q
    |||||||| ||||| || ||||| ||||||||||| ||| | ||||||||  | ||| | || ||||| |||| |||||| ||||| || ||||||||||    
T  7579 tgcagaatctatgaggaggacacgaaagctcattacaaggtgatgagtgatcgaaggagcaaaggacagcagagtcgtccgaagccgtatagtgctcctg 7480  T
Q  174 ctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     ||||||||| ||||||||| |||||||||||||||||||||| ||||| |||||||||| ||| ||||||||||| ||||||||    
T  7479 ttgacaagggtaagcagaggttgaatgatgagaggaggcccaataggagagatgctcctgctgagattgtttgttacaagtgtgg 7395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 9215 - 8971
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||||||||| ||  |||||| |  ||| ||||| ||||| |  || |||| ||| ||||| || ||||| ||| |||||||| ||     
T  9215 gacatcaagagagccattgggtaccagaagatcaaaaacttctctgaattggtaagtagctgcataatctatgaggaggacacgaaatctcattattagg 9116  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||  | ||| | || ||||| |||| |||||| ||||| || ||||||||||||||||| || ||||||| | ||||||||||||| || ||    
T  9115 tgatgagtgatcgaaggagcaaaggacagcagagtcgtccgaagccgtatagtgctcctgctgacaaagggaagcagaagctgaatgatgagagaagacc 9016  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||    
T  9015 caagaggagagatgctcctgatgagattgtttgttataagtgtgg 8971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 8724 - 8968
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||||||||||||  || | ||| | || ||||||||||| |  || ||||| || ||||| ||||| || ||||||||| | |||     
T  8724 gacatcaagagagccattgggtatcagaaggttagaattttctctgagttggtgagtagctgcaggatatatgaggaagatactaaagctcatgacaagg 8823  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    ||||||||||  | || ||||| ||| | |||| | ||| ||| || || ||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  8824 ttatgagtgaacgaagaggtaaaggatagcagagttgtcataaaccatatagtgctcctgcagacaagggaaagcagaggctgaatgatgagaggaggcc 8923  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| |||||| ||| | | |||||||| || ||||||||    
T  8924 caagaggagagatgcttctgctaagattgtttgctacaagtgtgg 8968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 74 - 258
Target Start/End: Original strand, 9550 - 9734
Alignment:
Q  74 tgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctg 173  Q
    ||||| || ||||| || ||||||||||||||||||||| | ||||||||| | || |||||||||||||||| |||||||||||| |||||||| ||||    
T  9550 tgcaggatctatgaggaggacaccaaagctcattataaggtgatgagtgagcgaagaggtaagggacaacagagtcgtcctaagccgtacagtgcccctg 9649  T
Q  174 ctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||| ||||| |||| |||  | ||||||||||||||||||   ||||| |||||||||| ||| || ||||||| |||||||||    
T  9650 ctgataagggtaagctgagacttaatgatgagaggaggcccgttaggagagatgctcctgctgagatagtttgttttaagtgtgg 9734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 245 - 489
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||||||||||||||| |||||  |||| | |  ||| ||||| ||||| | ||| ||||| |||||||| || ||||  ||||||||||| |||     
T  245 gacatcaagagagccattggttatcagaagattaaaaacttctctgatttggtaagcagttgcaggatttatgaggaggacaggaaagctcattacaagg 344  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | |||||| |  | || ||||||||||| || | |||||| ||||| || ||||||||| |||||||||| ||||||||| | ||||||||||| |||||    
T  345 tgatgagtaaacgtagaggtaagggacagcacagtcgtccgaagccgtatagtgctccttctgacaagggtaagcagaggttaaatgatgagagaaggcc 444  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||||||||| ||||||||| | |||||||||||||  ||||||||    
T  445 caagaggagagatgctcctatagatattgtttgtttcaagtgtgg 489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 232
Target Start/End: Complemental strand, 3463 - 3248
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||| || ||||| |||||| |||| ||   ||||||||| ||||| |  |  ||||| || |||||||| || || ||||||||||||||| | |    
T  3463 atcaagagggctattggttatcaaaagataaggaacttttctgaattggtaagtacctgcaggatatatgaagaggatacgaaagctcattataaggtga 3364  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||| | || || ||||||||||||| |||||| ||||| || ||||| |||||||||||||| ||||||||  ||||||||||||||||||||||    
T  3363 tgagtgagcgcagaggcaagggacaacagagtcgtccgaagccgtatagtgcccctgctgacaagggtaagcagagattgaatgatgagaggaggcccaa 3264  T
Q  217 gaggagggatgctcct 232  Q
    |||||| |||||||||    
T  3263 gaggagagatgctcct 3248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 196
Target Start/End: Complemental strand, 432 - 310
Alignment:
Q  74 tgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctg 173  Q
    ||||| || ||||| ||||| |||||  ||||||| |||||| ||| |||| |||  | |||||| || |||| ||  ||||||||||||||||| ||||    
T  432 tgcaggatctatgaggaagataccaagactcattacaagattgtgaatgagcggaaagctaagggtcagcagagtctccctaagccttacagtgcccctg 333  T
Q  174 ctgacaagggaaagcagaggatg 196  Q
    |||| |||||||| |||||||||    
T  332 ctgataagggaaaacagaggatg 310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 144 - 249
Target Start/End: Original strand, 4978 - 5083
Alignment:
Q  144 agaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgt 243  Q
    ||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||| |||||||||| ||| |||||    
T  4978 agaatcgtcctaaaccttacagtgctcctgctgacaaagggaagcagaggatgaatgatgataggaggcccaagaggagagatgctcctgctgaaattgt 5077  T
Q  244 ttgtta 249  Q
    ||||||    
T  5078 ttgtta 5083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 9477 - 9719
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||||||||||||  |||| ||| |||| ||||||||||| |  || ||||| ||  |||| || || || || |||| ||| |||     
T  9477 gacatcaagagagccattgggtatcagaagataagaatcttctctgagttggtgagtagctgcaggat--atgaggaggatactaaggctctttacaagg 9574  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||  | || ||||| ||||| |||| || |||||| || || ||||||| |||||| ||||||||||| |||||||||||||||||||||||    
T  9575 tgatgagtgaacgaagaggtaaaggacagcagagtcatcctaaaccatatagtgctcttgctgataagggaaagcaaaggatgaatgatgagaggaggcc 9674  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     || ||||| |||||||||| |||||||||||| || ||||||||    
T  9675 aaacaggagagatgctcctgctgatattgtttgctacaagtgtgg 9719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 251
Target Start/End: Original strand, 23684 - 23885
Alignment:
Q  50 gtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatc 149  Q
    |||||||||||| |||| | ||| ||||| |||||||| || || ||||| ||||||||||||||| ||| ||||  ||  | ||| || || |||| ||    
T  23684 gtcttttctgagctggtaagcagttgcaggatttatgaggaggataccaaggctcattataagattgtgaatgagcagaaagctaaaggtcagcagagtc 23783  T
Q  150 gtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgtta 249  Q
    |||||||||| ||||||||||||||||| ||||| || ||||| |||  |||||| ||| |||| |||| ||  ||| ||| |||||| ||||| |||||    
T  23784 gtcctaagccatacagtgctcctgctgataagggcaaacagagaatggttgatgataggtggcctaagaagaaagatactcatgttgagattgtctgtta 23883  T
Q  250 ta 251  Q
    ||    
T  23884 ta 23885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 53 - 218
Target Start/End: Complemental strand, 2561 - 2396
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    ||||| ||||||||||  || ||||| |||||||| ||||| |||||||||||||||||||| |||| |||| |||||||||||    |  ||| |||||    
T  2561 ttttcagagttggttagtagctgcaggatttatgaggaagagaccaaagctcattataagatcatgaatgagcggaggggtaagaactagtagagtcgtc 2462  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaaga 218  Q
    ||||||||||||||||||| ||||| ||||| ||||||||| |||||||||||||||| |||||||    
T  2461 ctaagccttacagtgctccggctgataagggtaagcagagggtgaatgatgagaggagacccaaga 2396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 231
Target Start/End: Complemental strand, 154093 - 153876
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||||||||||||||| |||||  |||| |||  ||| ||||||||||| | ||| || || |||||||| || || || ||||||||||| |||     
T  154093 gacatcaagagagccattggttatcagaagattagaaacttctctgagttggtaagcagctgtaggatttatgaggaggagacgaaagctcattacaagg 153994  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||| ||||    || ||||||||||| |||| |||||| ||||| || |||||||||||||||||||| |||||| |  |||||||||||||||||||    
T  153993 tgatgggtgaacaaagaggtaagggacagcagagtcgtccgaagccatatagtgctcctgctgacaagggtaagcagcgactgaatgatgagaggaggcc 153894  T
Q  214 caagaggagggatgctcc 231  Q
    ||||||||| ||||||||    
T  153893 caagaggagagatgctcc 153876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 213
Target Start/End: Original strand, 23275 - 23435
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    ||||||||||| || ||||| |||||||| ||||| ||||| || || | |||||| ||| || ||| ||||||||  || || || ||  | | |||||    
T  23275 ttttctgagttagtgaacagttgcagaatatatgaggaagatactaagggtcattacaaggttgtgaatgagaggaaaggcaaaggtcagtaaactcgtc 23374  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||||||||||||||||| |||||||| || ||  |||||||||||||||||||    
T  23375 caaagccttacagtgctcctgctgataagggaaaacaaagattgaatgatgagaggaggcc 23435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 14 - 258
Target Start/End: Original strand, 4912 - 5156
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||||||||||||  |||| ||| | || ||||| ||||| |  || ||||  || ||||| |||||||| ||||||||||| |||     
T  4912 gacatcaagagagccattgggtatcagaagattagaattttctctgaattggtgagtagctgcatgatatatgaggaagacactaaagctcattacaagg 5011  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||  | || ||||| ||| |  ||| ||||||||| || || |||||||||||||||||||||||||| ||| ||||| |||||||| ||||    
T  5012 tgatgagtgaacgaagaggtaaaggaaagtagagtcgtcctaaaccatatagtgctcctgctgacaagggaaagcaaaggctgaataatgagaggtggcc 5111  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
     | |||||| |||||||||| ||| |||||||| || ||||||||    
T  5112 taggaggagagatgctcctgctgagattgtttgctacaagtgtgg 5156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 14 - 258
Target Start/End: Complemental strand, 54648 - 54404
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||| |||||||||||||||||  ||||||||  ||| ||||| ||||| |  || |||||||| ||||| || ||||  |||||||||||||||     
T  54648 gacatcaaaagagccattgggtatcagaagatcagaaacttctctgaattggtaagtagctgcagaatctatgaggaggacatgaaagctcattataagg 54549  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||  | ||| | || ||||| |||| |||||| ||||| || ||||||||||||||||| || ||||||||| |||||||||||||||||||    
T  54548 tgatgagtgatcgaaggagcaaaggacatcagagtcgtccaaagccgtatagtgctcctgctgacaaagggaagcagaggttgaatgatgagaggaggcc 54449  T
Q  214 caagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    ||| ||  |  |||||| || ||| || |||||||| ||||||||    
T  54448 caatagatgaaatgctcttgctgagatcgtttgttacaagtgtgg 54404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 249
Target Start/End: Complemental strand, 2432 - 2197
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||| ||||||||||| |||||||||||||| ||| | || ||||| || || |   | ||||  || ||||| || ||||| |||||||||||||||     
T  2432 gacatgaagagagccatagggtatcaacagattagaattttctctgatttagtaagtcgttgcaagatctatgaggaggacacaaaagctcattataagg 2333  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||| | || ||||||||||| |||| ||||||||| || |||||||| ||| ||||||| |||||||| ||| ||||||||||||||||||     
T  2332 tgatgagtgagcgaagaggtaagggacagcagagtcgtcctaaaccgtacagtgcccctactgacaaaggaaagcaaaggttgaatgatgagaggaggcg 2233  T
Q  214 caagaggagggatgctcctgttgatattgtttgtta 249  Q
     || ||||| |||||||||| ||| || ||||||||    
T  2232 gaataggagagatgctcctgctgagatagtttgtta 2197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 80 - 246
Target Start/End: Original strand, 641 - 807
Alignment:
Q  80 atttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgaca 179  Q
    |||||||| || ||||| ||| ||||||| ||| | ||||||||  | || |||||||||||||||| |||||| ||||| || ||| ||||||||||||    
T  641 atttatgaggaggacacgaaatctcattacaaggtgatgagtgaatgtagaggtaagggacaacagagtcgtccgaagccatatagtactcctgctgaca 740  T
Q  180 agggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttg 246  Q
    |||| |||||| |  |||||||||||||||||||||||||||| ||||||||| | |||||||||||    
T  741 agggtaagcagcgactgaatgatgagaggaggcccaagaggagagatgctcctatggatattgtttg 807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 74 - 232
Target Start/End: Original strand, 646 - 804
Alignment:
Q  74 tgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctg 173  Q
    ||||| |||||||| || |||| |||||||||||| ||| | ||||||||  | || |||||||||||||||| |||||| ||||| || | ||||||||    
T  646 tgcaggatttatgaggaggacaacaaagctcattacaaggtgatgagtgaacgcagaggtaagggacaacagagtcgtccgaagccgtataatgctcctg 745  T
Q  174 ctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcct 232  Q
    |||||||||| ||| ||||| | |||||||||||||||||||||||||| |||||||||    
T  746 ctgacaagggtaagaagaggttaaatgatgagaggaggcccaagaggagagatgctcct 804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 98 - 248
Target Start/End: Complemental strand, 116141 - 115991
Alignment:
Q  98 aaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatga 197  Q
    ||||||||||| ||| | ||||||||| | || || |||||||| |||| |||||| ||||| || |||||||||||||||||||| ||| ||||  |||    
T  116141 aaagctcattacaaggtgatgagtgagcgtagaggcaagggacagcagagtcgtccgaagccgtatagtgctcctgctgacaagggtaagaagagactga 116042  T
Q  198 atgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgtt 248  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||||    
T  116041 atgatgagaggaggcctaagaggagggatgctcctactgatattgtttgtt 115991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 56 - 245
Target Start/End: Original strand, 62517 - 62706
Alignment:
Q  56 tctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtccta 155  Q
    ||||||||||| |  || ||||| || |||||||| || |||||||||||||| ||| | ||||||||| | || || ||||| || |||| |||||| |    
T  62517 tctgagttggtaagtagctgcaggatatatgaagaggataccaaagctcattacaaggtgatgagtgagcgtagaggcaaggggcagcagagtcgtccga 62616  T
Q  156 agccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgttt 245  Q
    |||| || ||||| |||||||||||||| ||||||||  ||||||||||||||||||| |||||||| |||||||||  |||||||||||    
T  62617 agccgtatagtgcccctgctgacaagggtaagcagagattgaatgatgagaggaggcctaagaggagagatgctcctactgatattgttt 62706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 203
Target Start/End: Original strand, 65028 - 65214
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||||||||||||||| |||||  | ||||||   || ||||||||||| |  || ||||||||||||||||| || || ||||||||||| ||| | |    
T  65028 atcaagagagccattggttatcagaaaatcagaaatttctctgagttggtgagtagctgcagaatttatgaagaggatacaaaagctcattacaaggtga 65127  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatg 203  Q
    |||||||||| |||  ||| |||||||||| ||| || ||||| || ||||| |||||||| ||||| ||||||||  |||||||||    
T  65128 tgagtgagagaaggaataatggacaacagagtcgcccgaagccatatagtgcccctgctgataagggcaagcagagactgaatgatg 65214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 246
Target Start/End: Original strand, 4160 - 4388
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||||||||||||||| |||||  | || |||  ||| ||||| ||||| | ||| || || |||||||| || || || ||| ||||||| ||| | |    
T  4160 atcaagagagccattggttatcagaaaataagaaacttctctgatttggtaagcagctgtaggatttatgaggaggatacgaaa-ctcattacaaggtga 4258  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||  | || || ||||||||||||| |||||| ||||| |||| |||||||||||||||||| ||||||||  | ||||||||||||||||||||    
T  4259 tgagtgaacgtagaggcaagggacaacagagtcgtccgaagccgtacactgctcctgctgacaagggtaagcagagtttaaatgatgagaggaggcccaa 4358  T
Q  217 gaggagggatgctcctgttgatattgtttg 246  Q
    |||||| |||||||||  ||||||||||||    
T  4359 gaggagagatgctcctactgatattgtttg 4388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 74 - 258
Target Start/End: Complemental strand, 34878 - 34694
Alignment:
Q  74 tgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctg 173  Q
    ||||| |||||||| || ||||| ||||||||||| ||| | ||||||||  | || || |||||||| |||| |||||| ||||  || ||||||||||    
T  34878 tgcaggatttatgaggaggacacaaaagctcattacaaggtgatgagtgaacgcagaggcaagggacagcagagtcgtccgaagctgtatagtgctcctg 34779  T
Q  174 ctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||||||||| ||||| ||| | |||||||||||||||||||||||||| |||||||||  ||| ||||||||||  ||||||||    
T  34778 ctgacaagggtaagcaaaggttaaatgatgagaggaggcccaagaggagagatgctcctactgacattgtttgtttcaagtgtgg 34694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 232
Target Start/End: Original strand, 518 - 736
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||||||||||||||| |||||  | || |||  ||| ||||| ||||| |  || ||||| |||| ||| ||||| |||||||||||||| |||     
T  518 gacatcaagagagccattggttatcagaaaataagaaacttctctgatttggtaagtagctgcaggatttctgaggaagataccaaagctcattacaagg 617  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||    || || |||||||| || | |||||| ||||| || ||||||||||| |||||||| ||||||||| | |||||||||||||||||    
T  618 tgatgagtgaacatagaggcaagggacagcaaagtcgtccgaagccgtatagtgctcctgccgacaaggggaagcagaggttaaatgatgagaggaggcc 717  T
Q  214 caagaggagggatgctcct 232  Q
    ||||||||| |||||||||    
T  718 caagaggagagatgctcct 736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 74 - 232
Target Start/End: Original strand, 1035 - 1193
Alignment:
Q  74 tgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctg 173  Q
    |||||||| ||||| || ||||| ||||||||||||||| | ||||||||| | || ||||||||||| |||| |||||| || || || ||||||||||    
T  1035 tgcagaatatatgaggaggacacaaaagctcattataaggtgatgagtgagcgcagaggtaagggacagcagagtcgtccgaaaccgtatagtgctcctg 1134  T
Q  174 ctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcct 232  Q
     ||||||||| ||||||||  ||||||||||||||||||| | |||||| |||||||||    
T  1135 ttgacaagggtaagcagagactgaatgatgagaggaggcctaggaggagagatgctcct 1193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 74 - 232
Target Start/End: Original strand, 28048 - 28206
Alignment:
Q  74 tgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctg 173  Q
    |||||||| ||||| || ||||| ||||||||||||||| | ||||||||| | || ||||||||||| |||| |||||| || || || ||||||||||    
T  28048 tgcagaatatatgaggaggacacaaaagctcattataaggtgatgagtgagcgcagaggtaagggacagcagagtcgtccgaaaccgtatagtgctcctg 28147  T
Q  174 ctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcct 232  Q
     ||||||||| ||||||||  ||||||||||||||||||| | |||||| |||||||||    
T  28148 ttgacaagggtaagcagagactgaatgatgagaggaggcctaggaggagagatgctcct 28206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 53 - 258
Target Start/End: Complemental strand, 17199 - 16994
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    |||||||| ||||| | ||| || ||||| ||||||||  | |||||||||||||| ||| | ||||||||| | |  || ||||||||||||| |||||    
T  17199 ttttctgaattggtaagcagatgtagaatatatgaagagaataccaaagctcattacaaggtgatgagtgagcgcaaaggcaagggacaacagagtcgtc 17100  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataa 252  Q
    | ||||| || ||||||||||| |||||||| |||||||   ||||||||||||||||||| |||||||| |||||||||  ||| ||| ||||||  ||    
T  17099 cgaagccgtatagtgctcctgccgacaagggtaagcagaaactgaatgatgagaggaggcctaagaggagagatgctcctactgagattatttgtttcaa 17000  T
Q  253 gtgtgg 258  Q
    ||||||    
T  16999 gtgtgg 16994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 53 - 213
Target Start/End: Original strand, 16351 - 16511
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    |||||||| ||||| |  || ||||| || ||||| ||||| |||||||||||||| ||| ||||||||||| ||||||||||| | || |||| |||||    
T  16351 ttttctgaattggtgagaagttgcaggatctatgaggaagataccaaagctcattacaaggttatgagtgagcggaggggtaagagtcagcagagtcgtc 16450  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | |||||||| |||||||||||||| || || ||||| ||| |||||||||||||||||||    
T  16451 caaagccttatagtgctcctgctgataaaggtaagcaaagggtgaatgatgagaggaggcc 16511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 222
Target Start/End: Complemental strand, 37540 - 37332
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    |||||||||||||| ||||| |||||  | || |||  ||||| |||| || | | ||| || || || ||||||||||| || ||||||||||| |||     
T  37540 gacatcaagagagctattggatatcagaaaattagaaacttttatgagctgttaagcagctgtaggatctatgaagaagatacgaaagctcattacaagg 37441  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    | ||||||||  | || ||||||||||| |||| |||||| ||||| || ||||||| ||| |||||||| ||||||||  |||||||||||||||||||    
T  37440 tgatgagtgaacgtagaggtaagggacagcagagtcgtccgaagccgtatagtgctcttgccgacaagggtaagcagagattgaatgatgagaggaggcc 37341  T
Q  214 caagaggag 222  Q
    |||||||||    
T  37340 caagaggag 37332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 83 - 232
Target Start/End: Original strand, 4076 - 4225
Alignment:
Q  83 tatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagg 182  Q
    |||||||| || || ||||||||||||||  | ||||||||| | || |||||||||||  ||| |||||| || || || ||||||||||||||||| |    
T  4076 tatgaagaggatacaaaagctcattataaagtgatgagtgagcgcagaggtaagggacagtagagtcgtccgaaaccgtatagtgctcctgctgacaaag 4175  T
Q  183 gaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcct 232  Q
    | || |||||| ||||||||||||||||||| |||||||| |||||||||    
T  4176 gtaaacagaggttgaatgatgagaggaggcctaagaggagagatgctcct 4225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 98 - 246
Target Start/End: Original strand, 71 - 219
Alignment:
Q  98 aaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatga 197  Q
    ||||||||||| ||| | ||||||||  | || || |||||||| |||| |||||| ||||| || | |||||||||||||||||| ||||||||| | |    
T  71 aaagctcattacaaggtgatgagtgaacgcagaggcaagggacagcagagtcgtccgaagccgtaaaatgctcctgctgacaagggtaagcagaggttaa 170  T
Q  198 atgatgagaggaggcccaagaggagggatgctcctgttgatattgtttg 246  Q
    |||||||||||||||||||||| || || ||||||  ||||||||||||    
T  171 atgatgagaggaggcccaagagcagagaggctcctactgatattgtttg 219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 221
Target Start/End: Original strand, 1185 - 1332
Alignment:
Q  74 tgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctg 173  Q
    |||||||| ||||| || || || ||||||||| | |||  | ||||||||||||  |||||| | |||||||||||||| |||||||||||| ||||||    
T  1185 tgcagaatctatgaggaggatacgaaagctcatcacaaggctgtgagtgagaggaaaggtaagagtcaacagaatcgtccaaagccttacagtactcctg 1284  T
Q  174 ctgacaagggaaagcagaggatgaatgatgagaggaggcccaagagga 221  Q
    |||| |||||  |||||||| |||||||||||||| | ||||||||||    
T  1285 ctgataagggtgagcagagggtgaatgatgagaggggacccaagagga 1332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 80 - 258
Target Start/End: Complemental strand, 5715 - 5538
Alignment:
Q  80 atttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgaca 179  Q
    ||||||||||| || |||||||||||||| ||  | |||||||||   || |  |||||||| |||| || ||  ||||| |||||||| ||| ||||||    
T  5715 atttatgaagaggataccaaagctcattacaaagtgatgagtgagcatagagtcaagggacagcagagtcatcggaagccgtacagtgcccctactgaca 5616  T
Q  180 agggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||| ||||||||  ||||||||||||||||| |||||||||| |||||||||  ||||||||||||||  ||||||||    
T  5615 agggtaagcagagattgaatgatgagaggagg-ccaagaggagagatgctcctactgatattgtttgtttcaagtgtgg 5538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 80 - 230
Target Start/End: Complemental strand, 6339 - 6190
Alignment:
Q  80 atttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgaca 179  Q
    |||||||| || ||||| ||||||||||| ||| | ||||||||  | || || |||||||| |||| |||||| ||||| || ||||||||| ||||||    
T  6339 atttatgaggaggacacgaaagctcattacaaggtgatgagtgaacgcagaggcaagggacagcagagtcgtccgaagccgtatagtgctcctactgaca 6240  T
Q  180 agggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctc 230  Q
    |||| ||||| ||| | |||||||||||||||||||||||||| |||||||    
T  6239 agggtaagca-aggttaaatgatgagaggaggcccaagaggagagatgctc 6190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 210
Target Start/End: Original strand, 40850 - 41007
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    ||||| |||||||| |  || |||||||||||||| || |||||||||||||||||||||||||||| ||||   ||||||||| | ||||| | ||||     
T  40850 ttttccgagttggtgagtagctgcagaatttatgacgatgacaccaaagctcattataagattatgaatgagcataggggtaagagccaacaaagtcgtg 40949  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggag 210  Q
     ||| |||||||  ||||  ||||| ||||| ||||||||| |||||||||| |||||    
T  40950 gtaaaccttacatcgctctagctgataagggtaagcagagggtgaatgatgaaaggag 41007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 258
Target Start/End: Complemental strand, 8095 - 7914
Alignment:
Q  77 agaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctg 176  Q
    ||||||||||| || || || || |||||||||||| ||| ||||||| |||||   ||||| || ||   |||||| ||||| ||||||||||||| ||    
T  8095 agaatttatgaggaggatacgaaggctcattataaggttaggagtgagcggaggaacaagggtcagcaaggtcgtccgaagccctacagtgctcctgttg 7996  T
Q  177 acaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||| ||| |||||||  |||||||||||||||| || ||||| ||||||| ||||  ||| ||||||||||| ||||||||    
T  7995 acaaaggagagcagagattgaatgatgagaggagacctaagagaagggatgttcctactgagattgtttgttacaagtgtgg 7914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 1368 - 1296
Alignment:
Q  186 agcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||||||  |||||||||||||||| || ||||| ||||||| ||||  ||| ||||||||||| ||||||||    
T  1368 agcagagattgaatgatgagaggagacctaagagaagggatgttcctactgagattgtttgttacaagtgtgg 1296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1914 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold1914
Description:

Target: scaffold1914; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 17 - 213
Target Start/End: Original strand, 936 - 1132
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||| ||||| || || |||||||||||| | || ||| | ||||| |   | ||||| || ||||| || ||||||||||||||||||||| | |    
T  936 atcaagagggccataggataccaacagatcagaattttctctaatttggtgagtcgctgcaggatctatgaggaggacaccaaagctcattataaggtga 1035  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
     ||||||| | || ||||||||||| |||||||||||||| || || ||||| || ||||| ||||| ||||||||  | |||||||||||||||||    
T  1036 agagtgagcgaagaggtaagggacatcagaatcgtcctaaaccgtatagtgccccggctgataagggtaagcagagacttaatgatgagaggaggcc 1132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 77 - 237
Target Start/End: Complemental strand, 30065 - 29905
Alignment:
Q  77 agaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctg 176  Q
    ||||| |||||||| || || || |||||||||||| | ||||||||| | || || |||||||| |||| |||||| || || |  |||||||||||||    
T  30065 agaatctatgaagaggatacaaaggctcattataaggtgatgagtgagcgtagaggcaagggacagcagagtcgtccgaaaccgtctagtgctcctgctg 29966  T
Q  177 acaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttga 237  Q
    |||| || ||||||||  ||||||||||||||||||| | |||||| ||||||||| ||||    
T  29965 acaaaggtaagcagagactgaatgatgagaggaggcctaggaggagagatgctcctattga 29905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 77 - 228
Target Start/End: Complemental strand, 6140 - 5989
Alignment:
Q  77 agaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctg 176  Q
    ||||| |||||||| || || ||||||||||||||  | ||||||||| | || |||||||| || |||| |||||| || || || |||||||||||||    
T  6140 agaatatatgaagaggatacgaaagctcattataaagtgatgagtgagcgcagaggtaagggtcagcagagtcgtccgaaaccgtatagtgctcctgctg 6041  T
Q  177 acaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgc 228  Q
    |||| ||||| |||| | ||||||||||||||||||| | |||||| |||||    
T  6040 acaaaggaaaacagatgctgaatgatgagaggaggcctaggaggagagatgc 5989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 192
Target Start/End: Original strand, 7363 - 7538
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||| || ||||| || ||||||||| |||| || || |||||||| ||||| ||||| |||||||| ||||| ||||| |||||||| ||||||     
T  7363 atcaagagggcaattggttaccaacagatccgagttttctccgagttggtgaacagttgcaggatttatgaggaagataccaaggctcattacaagattg 7462  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagag 192  Q
    ||| |||| ||| |  ||| || || |||| ||| ||||||||||||||||| |||||||| ||||| || |||||    
T  7463 tgaatgagcggaagactaaaggccagcagagtcgccctaagccttacagtgcccctgctgataagggcaaacagag 7538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 227
Target Start/End: Original strand, 12120 - 12330
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||||||||||||||| |||||  | || |||  |||  |||| ||||| | ||| || || |||||||| || || || |||| |||||| ||| | |    
T  12120 atcaagagagccattggttatcagaaaataagaaacttcactgatttggtaagcagctgtaggatttatgaggaggatacgaaagatcattacaaggtga 12219  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||  | || || |||||| | || | |||||| ||||| ||||||||||||||||||||||| ||||||||  ||||||||||||| ||||||||    
T  12220 tgagtgatcgtagaggcaagggatagcatagtcgtccgaagccgtacagtgctcctgctgacaagggtaagcagagactgaatgatgagagtaggcccaa 12319  T
Q  217 gaggagggatg 227  Q
    |||||| ||||    
T  12320 gaggagagatg 12330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 227
Target Start/End: Original strand, 20300 - 20510
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||||||||||||||| |||||  | || |||  |||  |||| ||||| | ||| || || |||||||| || || || |||| |||||| ||| | |    
T  20300 atcaagagagccattggttatcagaaaataagaaacttcactgatttggtaagcagctgtaggatttatgaggaggatacgaaagatcattacaaggtga 20399  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    |||||||  | || || |||||| | || | |||||| ||||| ||||||||||||||||||||||| ||||||||  ||||||||||||| ||||||||    
T  20400 tgagtgatcgtagaggcaagggatagcatagtcgtccgaagccgtacagtgctcctgctgacaagggtaagcagagactgaatgatgagagtaggcccaa 20499  T
Q  217 gaggagggatg 227  Q
    |||||| ||||    
T  20500 gaggagagatg 20510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 232
Target Start/End: Complemental strand, 52212 - 52034
Alignment:
Q  54 tttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcc 153  Q
    ||||||| ||||| | ||| || || ||||||||||| || || || |||||||||||  | ||||||||| | || ||||||||||| ||||  |||||    
T  52212 tttctgaattggtaagcagctgtaggatttatgaagaggatacaaaggctcattataaagtgatgagtgagcgcagaggtaagggacagcagagccgtcc 52113  T
Q  154 taagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcct 232  Q
     || |  || ||||||||||||||||| || || |||||| ||||||||||||||||||| | |||||| |||||||||    
T  52112 gaaactgtatagtgctcctgctgacaaaggtaaacagaggctgaatgatgagaggaggcctaggaggagagatgctcct 52034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1274 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold1274
Description:

Target: scaffold1274; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 52 - 213
Target Start/End: Complemental strand, 180 - 20
Alignment:
Q  52 cttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgt 151  Q
    |||||||||| |||| | ||| |||| ||| ||||| ||||| |||||||||||||| ||| || ||| ||||||||  || ||||  || || | ||||    
T  180 cttttctgagctggtgagcagttgcaaaatctatgaggaagataccaaagctcattacaaggttgtgaatgagaggaaaggcaaggt-cagcaaagtcgt 82  T
Q  152 cctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    || ||||||||||||||||||||||| ||||| ||||| ||  |||||||||||||||||||    
T  81 ccaaagccttacagtgctcctgctgataagggtaagcaaagattgaatgatgagaggaggcc 20  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 52 - 245
Target Start/End: Original strand, 57355 - 57548
Alignment:
Q  52 cttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgt 151  Q
    |||||||||| |||| | ||| || ||||| ||||| ||||| || || |||||||| ||| || ||| |||| |||  || || || || || | ||||    
T  57355 cttttctgagctggtgagcagttgtagaatatatgaggaagatactaaggctcattacaaggttgtgaatgagcggaaaggcaaaggtcagcaaagtcgt 57454  T
Q  152 cctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgttt 245  Q
    || ||||||||||||||||||||||| ||||| ||||| || |||||||||||||||||||| |  | ||  |||||||||||||| |||||||    
T  57455 ccaaagccttacagtgctcctgctgataagggtaagcaaagaatgaatgatgagaggaggcctagaaagaaagatgctcctgttgagattgttt 57548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 213
Target Start/End: Complemental strand, 5686 - 5490
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||| | |||||||| |||||  ||||| | | |||||||||  |||| | ||| |||||||| ||||| ||||| || ||||||||||| ||| ||     
T  5686 atcaagtgggccattggatatcagaagatccgtgacttttctgaactggtgagcagttgcagaatctatgaggaagatacgaaagctcattacaaggttg 5587  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    ||| |||||||| ||||| | | || || | |||||  ||||||||||||| || |||||| ||||| ||||| ||| |||||||||||||||||||    
T  5586 tgaatgagaggaagggtaggagtcagcaaagtcgtctaaagccttacagtgttcttgctgataagggtaagcaaagggtgaatgatgagaggaggcc 5490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 258
Target Start/End: Original strand, 3659 - 3839
Alignment:
Q  78 gaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga 177  Q
    |||| ||||| || || |||||||| ||||||||| |||||||||||| ||||   |  || || ||   |||||||||||| || ||||||||||||||    
T  3659 gaatctatgaggaggataccaaagcacattataaggttatgagtgagaagaggaacagaggccagcaaggtcgtcctaagccctatagtgctcctgctga 3758  T
Q  178 caagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||||| || || ||  |||||||||||||||| || |||||||| |||| | ||||||| |||||||| || ||||||||    
T  3759 caaggggaaacaaagattgaatgatgagaggagacctaagaggagagatgtttctgttgagattgtttgctacaagtgtgg 3839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 48325 - 48137
Alignment:
Q  20 aagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatga 119  Q
    |||||||| ||||| || ||  ||||| | ||||||||||||||||| | ||| |||||||||||||| || || |||||  ||||||| |||||| |||    
T  48325 aagagagcaattggttaccagaagatccgtgtcttttctgagttggtgagcagttgcagaatttatgaggaggataccaagactcattacaagattgtga 48226  T
Q  120 gtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagagg 208  Q
     |||| | |  |  || || || |||| |||||||||||||||||||||||||||||| ||||| || ||||| |||  ||||||||||    
T  48225 atgagcgaaaagccaaaggtcagcagagtcgtcctaagccttacagtgctcctgctgataagggtaaacagagaatggttgatgagagg 48137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 50 - 208
Target Start/End: Original strand, 55210 - 55368
Alignment:
Q  50 gtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatc 149  Q
    ||||||||||||||||| | ||| |||||||||||||| || || |||||  ||||||| |||||| ||| |||| | |  |  || || || |||| ||    
T  55210 gtcttttctgagttggtgagcagttgcagaatttatgaggaggataccaagactcattacaagattgtgaatgagcgaaaagacaaaggtcagcagagtc 55309  T
Q  150 gtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagagg 208  Q
    |||||||| ||||||||||||||||||| ||||| || ||||| |||  ||||||||||    
T  55310 gtcctaagacttacagtgctcctgctgataagggtaaacagagaatggttgatgagagg 55368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 63378 - 63466
Alignment:
Q  170 cctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    |||||||||||||| ||||| ||  |||||||||||||||||||||||||||| |||||||||  ||||||||||||||  ||||||||    
T  63378 cctgctgacaagggtaagcaaagattgaatgatgagaggaggcccaagaggagagatgctcctactgatattgtttgtttcaagtgtgg 63466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 196
Target Start/End: Complemental strand, 8809 - 8633
Alignment:
Q  20 aagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatga 119  Q
    ||||| || ||||| || ||||||||| |||| || || ||| |||| ||||| |||||||||||||| || || ||||| |||||||| |||||| |||    
T  8809 aagagggcaattggataccaacagatccgagttttctccgagctggtgaacagttgcagaatttatgaggatgataccaaggctcattacaagattgtga 8710  T
Q  120 gtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatg 196  Q
     |||| ||| |  |||||| ||||||| ||| |||||||| || ||||| |||||||| ||||| || |||||||||    
T  8709 atgagcggaagactaagggccaacagagtcgccctaagccctatagtgcccctgctgataagggcaaacagaggatg 8633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 177
Target Start/End: Original strand, 107480 - 107643
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| |  |||||||| |||||| | ||||| ||| | || |||||||| || ||||| || |||||||| || || || ||||| ||  |||    
T  107480 gacatcaagagggagattgggtaccaacagctgagagtttttccggatttggttaatagctgcaggatctatgaagaggatacgaaggctcactacgaga 107579  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga 177  Q
    |  ||| |||||||| ||| ||||||||||||| |||||||||||| |||||||| || |||||    
T  107580 tagtgaatgagaggaagggcaagggacaacagagtcgtcctaagccgtacagtgcccccgctga 107643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 258
Target Start/End: Complemental strand, 116027 - 115919
Alignment:
Q  150 gtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgtta 249  Q
    |||||||||| ||||| || |||||||  |||||||||||  |  ||||||||||||| ||||||||| | || ||  |||||| ||| || ||||| |     
T  116027 gtcctaagccgtacagcgcccctgctggtaagggaaagcaacgactgaatgatgagagaaggcccaagggaagagacactcctgctgaaatagtttgctt 115928  T
Q  250 taagtgtgg 258  Q
    |||||||||    
T  115927 taagtgtgg 115919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 213
Target Start/End: Original strand, 23004 - 23200
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||| ||||||||||||||| ||||| |   ||||||||||||||| |  || |||| ||| ||||| ||||| || ||||||||||| |||  |     
T  23004 atcaagagggccattgggtatcaaaagatccgtaacttttctgagttggtgagtagctgcaaaatctatgaggaagatactaaagctcattacaaggctg 23103  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    ||| |||||||||   ||     || || |||||||||||||||||||||||||||||||| ||||| || |||||  ||||||||||||| |||||    
T  23104 tgaatgagaggagacctagaaatcagcaaaatcgtcctaagccttacagtgctcctgctgataagggtaaacagagattgaatgatgagagaaggcc 23200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 213
Target Start/End: Original strand, 9192 - 9253
Alignment:
Q  152 cctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    ||||||||||| |||||||||||||| ||||| || || ||  |||||||||||||||||||    
T  9192 cctaagccttatagtgctcctgctgataagggtaaacaaagattgaatgatgagaggaggcc 9253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 17 - 196
Target Start/End: Original strand, 36526 - 36705
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||| || ||||| || ||||||||| |||| || || |||||||| ||||| |||||||||||||| || || ||||| |||||||| ||||||     
T  36526 atcaagagggcaattggataccaacagatctgagttttctccgagttggtgaacagttgcagaatttatgaggaggataccaaggctcattacaagattg 36625  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatg 196  Q
    ||| | || ||| | ||||||| || |||| ||| |||||||| || ||||| |||||||| ||||| || || ||||||    
T  36626 tgaattagcggaagagtaagggccagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacaaaggatg 36705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 213
Target Start/End: Complemental strand, 26819 - 26754
Alignment:
Q  148 tcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    |||||| ||||||||||||||||||||||  ||||| ||||| ||  |||||||||||||||||||    
T  26819 tcgtccaaagccttacagtgctcctgctggtaagggtaagcaaagagtgaatgatgagaggaggcc 26754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 74 - 213
Target Start/End: Complemental strand, 18386 - 18247
Alignment:
Q  74 tgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctg 173  Q
    |||||||||||||||||||| |||||||||||||| |||  | ||| ||||||||  ||||| || ||  | | |||||| |||||||||| ||||||||    
T  18386 tgcagaatttatgaagaagataccaaagctcattacaaggctgtgaatgagaggaaaggtaaaggtcagaaaagtcgtccaaagccttacaatgctcctg 18287  T
Q  174 ctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    |||| ||||| ||||| ||  | |||||||||||||||||    
T  18286 ctgataagggtaagcaaagagttaatgatgagaggaggcc 18247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 208
Target Start/End: Original strand, 110670 - 110804
Alignment:
Q  74 tgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctg 173  Q
    ||||| |||||||| || || ||||| |||||||| |||||| ||| |||| |||  |  || || || ||||  |||||||||||| ||||||||||||    
T  110670 tgcaggatttatgaggaggataccaaggctcattacaagattgtgaatgagcggaaagtcaaaggtcagcagagccgtcctaagcctcacagtgctcctg 110769  T
Q  174 ctgacaagggaaagcagaggatgaatgatgagagg 208  Q
    | || ||||| |||||||| |||  ||||||||||    
T  110770 ccgataaggggaagcagagaatggttgatgagagg 110804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 80 - 222
Target Start/End: Original strand, 630 - 771
Alignment:
Q  80 atttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgaca 179  Q
    ||||||||||| || || ||||||||  ||||| | ||||||||| | || ||||||||||| |||| |||||| || || |||||||||||||||||||    
T  630 atttatgaagaggatacaaaagctcac-ataaggtgatgagtgagtgtagaggtaagggacagcagagtcgtccgaaaccgtacagtgctcctgctgaca 728  T
Q  180 agggaaagcagaggatgaatgatgagaggaggcccaagaggag 222  Q
    | || ||  ||||  ||||||||||||||||||| ||||||||    
T  729 aaggtaaatagagactgaatgatgagaggaggcctaagaggag 771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 251
Target Start/End: Complemental strand, 7435 - 7237
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    ||||||||| |||| | ||| ||||| || ||||| ||||| || || |||||||| ||| || ||| |||| |||  || ||| | || || | ||| |    
T  7435 ttttctgagctggtgagcagttgcaggatatatgaggaagatactaaggctcattacaaggttgtgaatgagcggaaaggcaagagtcagcaaagtcgac 7336  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttata 251  Q
    | ||||||||||||||||||||||| ||||| ||||| || |||||||||||||||||||| |  | ||  |||||||||||||| |||||||| ||||    
T  7335 caaagccttacagtgctcctgctgataagggtaagcaaagaatgaatgatgagaggaggcctagaaagaaagatgctcctgttgagattgtttgctata 7237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 251
Target Start/End: Complemental strand, 14565 - 14367
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    ||||||||| |||| | ||| ||||| || ||||| ||||| || || |||||||| ||| || ||| |||| |||  || ||| | || || | ||| |    
T  14565 ttttctgagctggtgagcagttgcaggatatatgaggaagatactaaggctcattacaaggttgtgaatgagcggaaaggcaagagtcagcaaagtcgac 14466  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttata 251  Q
    | ||||||||||||||||||||||| ||||| ||||| || |||||||||||||||||||| |  | ||  |||||||||||||| |||||||| ||||    
T  14465 caaagccttacagtgctcctgctgataagggtaagcaaagaatgaatgatgagaggaggcctagaaagaaagatgctcctgttgagattgtttgctata 14367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 3754 - 3920
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||||||||||||||||||  |||||||   ||| ||||| ||||| |  || |||||||| ||||| || ||||| ||||||||||| |||     
T  3754 gacatcaagagagccattgggtatcagaagatcaggaacttctctgaattggtaagtagctgcagaatctatgaggaggacacgaaagctcattacaagg 3853  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaa 180  Q
    | ||||||||  | ||| | || ||||| |||| |||||| ||||| || |||||||||||||||||    
T  3854 tgatgagtgatcgaaggagcaaaggacagcagagtcgtccgaagccgtatagtgctcctgctgacaa 3920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 134 - 232
Target Start/End: Complemental strand, 43179 - 43081
Alignment:
Q  134 aagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcct 232  Q
    ||||||||  ||| |||||| ||||| || ||||| |||||||||||||| || |||||| ||||||||||||||||||| |||||||| |||||||||    
T  43179 aagggacagtagagtcgtccgaagccgtatagtgcccctgctgacaagggtaaacagaggttgaatgatgagaggaggcctaagaggagagatgctcct 43081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 233
Target Start/End: Complemental strand, 383 - 170
Alignment:
Q  20 aagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatga 119  Q
    ||||| || ||||| |||||||||||| |||| ||| || | ||||| ||||| || ||||| ||||| || ||||||||||||||||| ||| || |||    
T  383 aagagggcaattggatatcaacagatccgagtttttcctaatttggtgaacagctgtagaatctatgaggaggacaccaaagctcattacaaggttgtga 284  T
Q  120 gtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagag 219  Q
     |||| ||| |  |||||| |  |||| ||| |||||||| || ||||| |||||||| |||||||| ||||| |||   ||||| ||| |||| ||||     
T  283 atgagcggaagactaagggccggcagagtcgccctaagccctatagtgcccctgctgataagggaaaacagagaatggtcgatgataggcggcctaagaa 184  T
Q  220 gagggatgctcctg 233  Q
    || |||||||||||    
T  183 gaaggatgctcctg 170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 192
Target Start/End: Complemental strand, 11859 - 11686
Alignment:
Q  19 caagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatg 118  Q
    ||||||||| ||||| || ||  ||||| | |||||||||||| |||| | ||| |||||||||||||| || || ||||| |||||||  |||||| ||    
T  11859 caagagagcgattggttaccagaagatccgtgtcttttctgagctggtgagcagttgcagaatttatgaggaggataccaaggctcatttcaagattgtg 11760  T
Q  119 agtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagag 192  Q
    | |||| |||  | |||||| || |||| ||| ||||||||||||||||||||| |||| ||||| || |||||    
T  11759 aatgagcggaaagctaagggtcagcagagtcgccctaagccttacagtgctcctactgataagggcaaacagag 11686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 233
Target Start/End: Complemental strand, 14682 - 14466
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||||||||| ||||| || ||  ||||| | || || |||||| |||| | ||| |||||||| ||| | || || || || |||||||| ||||||     
T  14682 atcaagagagcaattggttaccagaagatctgtgtgttctctgagctggtgagcagttgcagaatatattaggaggatactaaggctcattacaagattg 14583  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    ||| |||| ||| |  |||||| ||||||| ||| ||||||||||| |||||  ||||||| ||||| || ||||| |||    |||| ||| |||| ||    
T  14582 tgaatgagcggaagactaagggtcaacagagtcgccctaagccttatagtgcctctgctgataagggcaaacagagaatggtcaatgataggcggcctaa 14483  T
Q  217 gaggagggatgctcctg 233  Q
    || || |||||||||||    
T  14482 gaagaaggatgctcctg 14466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 232
Target Start/End: Original strand, 43211 - 43340
Alignment:
Q  103 tcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgat 202  Q
    |||||| ||| | ||||||||| | || |||||||||||||||| |||||| || |  || ||||||||| || |||| || || |||||| ||||||||    
T  43211 tcattacaaggtgatgagtgagcgcagaggtaagggacaacagagtcgtccaaaactgtatagtgctccttctaacaaaggtaaacagaggctgaatgat 43310  T
Q  203 gagaggaggcccaagaggagggatgctcct 232  Q
    ||||||||||| |||||||| |||||||||    
T  43311 gagaggaggcctaagaggagagatgctcct 43340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 183
Target Start/End: Complemental strand, 615 - 449
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||||||||| ||||| || ||  ||||| | |||||||||||| |||| | ||| ||||| || ||||| || || ||||| |||||||||||||||     
T  615 atcaagagagcgattggttaccagaagatccgtgtcttttctgagctggtgagcagttgcaggatatatgaggaggataccaaggctcattataagattg 516  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaggg 183  Q
    ||| ||||  ||  |  || || || |||| |||||||||||||||||||||||||||||| |||||    
T  515 tgaatgagcagaaagccaaaggtcagcagagtcgtcctaagccttacagtgctcctgctgataaggg 449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 183
Target Start/End: Complemental strand, 5032 - 4866
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||||||||| ||||| || ||  ||||| | |||||||||||| |||| | ||| ||||| || ||||| || || ||||| |||||||||||||||     
T  5032 atcaagagagcgattggttaccagaagatccgtgtcttttctgagctggtgagcagttgcaggatatatgaggaggataccaaggctcattataagattg 4933  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaaggg 183  Q
    ||| ||||  ||  |  || || || |||| |||||||||||||||||||||||||||||| |||||    
T  4932 tgaatgagcagaaagccaaaggtcagcagagtcgtcctaagccttacagtgctcctgctgataaggg 4866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 18101 - 18266
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    |||||||||||||| |  || || ||||||||||| |||   | ||||||||||||||||||||||| |||| | | |||||||   ||||||| |||||    
T  18101 ttttctgagttggtaagtagctggagaatttatgaggaa---atcaaagctcattataagattatgaatgagcgaaagggtaagaatcaacagagtcgtc 18197  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagagga 221  Q
    ||||| ||||||||||||| ||| | |||||  || || || |||||||||||| | | ||||||||||    
T  18198 ctaagtcttacagtgctccagctaataagggtgagaagggggtgaatgatgagacgggacccaagagga 18266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 213
Target Start/End: Original strand, 14006 - 14167
Alignment:
Q  52 cttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgt 151  Q
    ||||||| || |||| | ||| |||||||| ||||| ||||| || || |||||||| ||| || ||| ||||||||  || ||||| || || | ||||    
T  14006 cttttctaagctggtgagcagttgcagaatatatgaggaagatactaaggctcattacaaggttgtgaatgagaggaaaggcaagggtcagcaaagtcgt 14105  T
Q  152 cctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    || ||||||||||||||||||| ||| |||||||| || || || |||||||||| ||||||    
T  14106 ccaaagccttacagtgctcctgatgataagggaaaacaaagaataaatgatgagaagaggcc 14167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 186
Target Start/End: Complemental strand, 2562 - 2418
Alignment:
Q  42 agatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggaca 141  Q
    ||||| |||||||||||||| |||| | ||| ||||| ||||| || || || |||||  ||||||| |||||| ||| |||| | | ||  ||||| ||    
T  2562 agatccgagtcttttctgagctggtgagcagttgcaggatttacgaggaggataccaagactcattacaagattgtgaatgagcgaaaggccaagggtca 2463  T
Q  142 acagaatcgtcctaagccttacagtgctcctgctgacaagggaaa 186  Q
    ||||| ||||||||||||||||||||| | |||||| ||||||||    
T  2462 acagagtcgtcctaagccttacagtgcccttgctgataagggaaa 2418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 143 - 251
Target Start/End: Complemental strand, 104698 - 104590
Alignment:
Q  143 cagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattg 242  Q
    |||| |||||| |||||||| |||||||||||||| |||||||| ||||| |||| |||||||||| |||| |  | ||  |||||||||||||| ||||    
T  104698 cagagtcgtccaaagccttatagtgctcctgctgataagggaaaacagagaatgattgatgagaggcggcctagaaagaaagatgctcctgttgagattg 104599  T
Q  243 tttgttata 251  Q
    |||| ||||    
T  104598 tttgctata 104590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 232
Target Start/End: Complemental strand, 2257 - 2103
Alignment:
Q  77 agaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctg 176  Q
    ||||| |||||||| || || ||||||||||||||  | ||||||||| | || ||||||||| |  ||| |||||| || || |  |||||| ||||||    
T  2257 agaatctatgaagaggatacaaaagctcattataaagtgatgagtgagcgcagaggtaagggatagtagagtcgtccgaaaccgtt-agtgcttctgctg 2159  T
Q  177 acaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcct 232  Q
    |||| || || |||||| ||||||||||||||||||| |||||| | |||||||||    
T  2158 acaaaggtaaacagaggctgaatgatgagaggaggcctaagaggtgagatgctcct 2103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 258
Target Start/End: Complemental strand, 670 - 471
Alignment:
Q  59 gagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagc 158  Q
    |||||||| ||||| || ||||||||||| ||||| ||||| |||||||| |||||  ||| |||| ||| |  |||||| || |||| ||| |||||||    
T  670 gagttggtgaacagctgtagaatttatgacgaagataccaaggctcattacaagatggtgaatgagcggaagactaagggccagcagagtcgccctaagc 571  T
Q  159 cttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    | || |||||||||||||| ||||| || ||||| |||   ||||| ||| | || |||| || | ||||||||| ||| ||||| |||| ||| |||||    
T  570 cctatagtgctcctgctgataagggcaaacagagaatggtcgatgataggcgacctaagaagaagaatgctcctgctgagattgtctgttttaattgtgg 471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 8856 - 8641
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||| ||||| || ||||| || |||||| | ||||| ||| | || ||||| || || ||||| || ||||||||||| || || ||||| |||||||    
T  8856 gacattaagagggcgattggataccaacagcttagagtttttccagatttggtcaatagctgcaggatctatgaagaagatactaaggctcactataaga 8757  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    || |||  ||||||| ||| |||||||| |||| |||||||||||| |||||||| ||  |||| || || || |||||||||   ||||| ||| ||||    
T  8756 ttgtgaacgagaggaagggcaagggacatcagagtcgtcctaagccgtacagtgccccaactgataaagggaaacagaggatggtcgatgataggcggcc 8657  T
Q  214 caagaggagggatgct 229  Q
     |||| || |||||||    
T  8656 taagaagaaggatgct 8641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 229
Target Start/End: Complemental strand, 4022 - 3807
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || |||||||| |||||| | ||||| ||| | || |||||||| || ||||| |  |||||||| || || || ||||| || |||     
T  4022 gacatcaagagggcgattgggtaccaacagctgagagtttttccggatttggttaatagctgcaggacctatgaagaggatacgaaggctcactacaagg 3923  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    |  ||| |||||||| ||| |||||||| |||| |||||||||||| |||||||| || ||||| || || || |||||||||   ||||| ||| ||||    
T  3922 tagtgaatgagaggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccccgctgataaagggaaacagaggatggtcgatgataggcggcc 3823  T
Q  214 caagaggagggatgct 229  Q
     |||| || |||||||    
T  3822 taagaagaaggatgct 3807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 233
Target Start/End: Complemental strand, 17737 - 17542
Alignment:
Q  38 caacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagg 137  Q
    ||||||||| |||| ||| |||| |||||||| || |||||||||||||| || || ||||| |||||||| | | || ||| |||| ||| |  |||||    
T  17737 caacagatccgagtttttcctgatttggttaatagctgcagaatttatgaggaggataccaaggctcattacacggttgtgaatgagcggaagactaagg 17638  T
Q  138 gacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctg 233  Q
    | || |||| ||| |||||||| || ||||| |||||||| ||||| || || || |||   ||||| ||| |||| |||| || |||||||||||    
T  17637 gccagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacatagaatggtcgatgataggcggcctaagaagaaggatgctcctg 17542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 102 - 196
Target Start/End: Complemental strand, 8924 - 8830
Alignment:
Q  102 ctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatg 196  Q
    ||||||| |||||| ||| |||| |||  | |||||| ||||||| ||| ||||||||||||||||| |||||||| |||||||| |||||||||    
T  8924 ctcattacaagattgtgaatgagcggaaagctaagggtcaacagagtcgccctaagccttacagtgcccctgctgataagggaaaacagaggatg 8830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 258
Target Start/End: Original strand, 66239 - 66477
Alignment:
Q  20 aagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatga 119  Q
    ||||| || ||||| || ||||||||| |||| || || ||||| || ||||| || ||||||||||| ||||| ||||| |||||||| ||| || |||    
T  66239 aagagggcaattggataccaacagatccgagttttctccgagttcgtgaacagctgtagaatttatgaggaagataccaaggctcattacaaggttgtga 66338  T
Q  120 gtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagag 219  Q
     |||| ||| |  |||||| || |||| ||| |||||||| || ||||| |||||||| ||||| || ||||| |||  ||| || ||  |||| | ||     
T  66339 atgagcggaagactaagggccagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacagagaatggttgaggatagacggccaaggaa 66438  T
Q  220 gagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    || |||||||||| |||| ||||| |||| ||| |||||    
T  66439 gaaggatgctcctattgagattgtctgttttaaatgtgg 66477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1220 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 42 - 183
Target Start/End: Complemental strand, 309 - 168
Alignment:
Q  42 agatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggaca 141  Q
    |||||||||| ||| |||| ||||| ||||| || || |||||||| |||||||||||||||||| | ||| || ||| |||| ||| |  |||||| ||    
T  309 agatcagagtttttcctgatttggtgaacagctgtaggatttatgaggaagacaccaaagctcatcacaaggttgtgaatgagcggaagactaagggcca 210  T
Q  142 acagaatcgtcctaagccttacagtgctcctgctgacaaggg 183  Q
     |||| ||| |||||||| || ||||| |||||||| |||||    
T  209 gcagagtcgccctaagccctatagtgcccctgctgataaggg 168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0993 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0993
Description:

Target: scaffold0993; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 251
Target Start/End: Complemental strand, 1463 - 1346
Alignment:
Q  134 aagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctg 233  Q
    ||||| ||||||| ||| |||||||||||||||||||||||||| ||||| || ||||| |||  |||||| ||| | || |  | || ||| |||||||    
T  1463 aagggccaacagagtcgccctaagccttacagtgctcctgctgataagggtaaacagagaatggttgatgataggcgcccgagaaagatggaagctcctg 1364  T
Q  234 ttgatattgtttgttata 251  Q
    |||| |||||||||||||    
T  1363 ttgagattgtttgttata 1346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 233
Target Start/End: Complemental strand, 8818 - 8605
Alignment:
Q  20 aagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatga 119  Q
    |||||||| ||||| || ||  ||||| | |||||||||||| |||| |  || |||||||||||||| || || || || |||||||| |||||| |||    
T  8818 aagagagcaattggttaccagaagatccgtgtcttttctgagctggtgagtagttgcagaatttatgaggaggatactaaggctcattacaagattgtga 8719  T
Q  120 gtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagag 219  Q
     |||| |||  | |||||| || |||| ||| ||||||||||||||||||| ||| || ||||| || ||||| |||   ||| | ||| |||| ||||     
T  8718 atgagcggaaagctaagggtcagcagagtcgccctaagccttacagtgctcttgccgataagggcaaacagagaatggtcgataataggcggcctaagaa 8619  T
Q  220 gagggatgctcctg 233  Q
    || |||||||||||    
T  8618 gaaggatgctcctg 8605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 258
Target Start/End: Complemental strand, 22202 - 21961
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||||||||| ||||| || ||||||||| |||| || ||  ||||||| ||||| ||||| |||||||| || || ||||| |||||||| ||||||     
T  22202 atcaagagagcaattggataccaacagatccgagttttctccaagttggtgaacagttgcaggatttatgaggaggataccaaggctcattacaagattg 22103  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    ||| |||| ||| |  |||||| || | || ||||| |||||| || ||||| ||||||   ||||| || |||||||||   ||||| ||  |||| |     
T  22102 tgaatgagcggaagactaagggccagctgagtcgtcttaagccctatagtgcccctgcttttaagggcaaacagaggatggtcgatgatagacggccaag 22003  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    || || ||||||||||| ||| ||||| |||| ||| |||||    
T  22002 gaagaaggatgctcctgctgagattgtctgttttaattgtgg 21961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 17 - 258
Target Start/End: Complemental strand, 37626 - 37385
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||||||||| ||||| || ||||||||| |||| || ||  ||||||| ||||| ||||| |||||||| || || ||||| |||||||| ||||||     
T  37626 atcaagagagcaattggataccaacagatccgagttttctccaagttggtgaacagttgcaggatttatgaggaggataccaaggctcattacaagattg 37527  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    ||| |||| ||| |  |||||| || | || ||||| |||||| || ||||| ||||||   ||||| || |||||||||   ||||| ||  |||| |     
T  37526 tgaatgagcggaagactaagggccagctgagtcgtcttaagccctatagtgcccctgcttttaagggcaaacagaggatggtcgatgatagacggccaag 37427  T
Q  217 gaggagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    || || ||||||||||| ||| ||||| |||| ||| |||||    
T  37426 gaagaaggatgctcctgctgagattgtctgttttaattgtgg 37385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1600 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1600
Description:

Target: scaffold1600; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 213
Target Start/End: Complemental strand, 664 - 468
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    |||||||  |||||||| |||||| ||||| |   |||||||||  ||||   ||| |||||| | ||||| || || || ||||||||||| |||  |     
T  664 atcaagatggccattggatatcaaaagatccgtaacttttctgaactggtgtgcagttgcagagtctatgaggaggatactaaagctcattacaaggctg 565  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    ||||||||||||  |||||||| || || | ||| || ||||||||||| ||||||||||| ||||| || || ||  |||||||||||||||||||    
T  564 tgagtgagaggaaaggtaagggtcagcaaagtcgcccaaagccttacagcgctcctgctgataagggtaaacaaagagtgaatgatgagaggaggcc 468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 173
Target Start/End: Complemental strand, 12050 - 11891
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||| || |||||||| ||||| ||| | || ||||| || || ||||| || |||||||| || ||||| ||||| || ||||    
T  12050 gacatcaagagggcgattggataccaacagattagagtttttccggatttggtcaatagctgcaggatctatgaagaggataccaaggctcactacaaga 11951  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctg 173  Q
    |  |||  ||||||| | | |||||||| |||| |||||||||||| |||||||| ||||    
T  11950 tagtgaacgagaggaagagcaagggacagcagagtcgtcctaagccgtacagtgcccctg 11891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 177
Target Start/End: Complemental strand, 55554 - 55439
Alignment:
Q  62 ttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagcctt 161  Q
    |||||||| || |||||||| || || ||||| || || |||||||| |||||  ||| ||||| || ||| || |||||||||| |||||||||||| |    
T  55554 ttggttaatagctgcagaatctacgaggaagatactaaggctcattacaagatggtgaatgagaagaagggcaaaggacaacagagtcgtcctaagccgt 55455  T
Q  162 acagtgctcctgctga 177  Q
    ||||||| ||||||||    
T  55454 acagtgcccctgctga 55439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 173
Target Start/End: Complemental strand, 21578 - 21419
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||| || |||||| | ||||| ||| | || ||||| || || ||||| || |||||||| || ||||| ||||| || ||||    
T  21578 gacatcaagagggcgattggataccaacagcttagagtttttccggatttggtcaatagctgcaggatctatgaagaggataccaaggctcactacaaga 21479  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctg 173  Q
    |  |||  ||||||| | | |||||||| |||| |||||||||||| |||||||| ||||    
T  21478 tagtgaacgagaggaagagcaagggacagcagagtcgtcctaagccgtacagtgcccctg 21419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 1696 - 1766
Alignment:
Q  143 cagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    |||| |||||| ||||||||||||||||||||||| |||||||| || ||  | |||||||||||||||||    
T  1696 cagagtcgtccaaagccttacagtgctcctgctgataagggaaaacaaagagttaatgatgagaggaggcc 1766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 718 - 560
Alignment:
Q  38 caacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagg 137  Q
    ||||||||| |||| || || |||||||| || || |||||||||||||| || ||||||| ||||||||| ||| || | | |||| ||| |  |||||    
T  718 caacagatctgagttttctccgagttggtgaatagttgcagaatttatgaggaggacaccagagctcattacaaggttgttaatgagcggaagactaagg 619  T
Q  138 gacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatg 196  Q
    | || |||| ||| ||||||||||| ||| | |||| ||| ||||| || |||||||||    
T  618 gccagcagagtcgccctaagccttatagttcccctgttgataagggcaaacagaggatg 560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 4560 - 4630
Alignment:
Q  143 cagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    |||| |||||| ||||||||||||||||||||||| |||||||| || ||  | |||||||||||||||||    
T  4560 cagagtcgtccaaagccttacagtgctcctgctgataagggaaaacaaagagttaatgatgagaggaggcc 4630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 243
Target Start/End: Original strand, 4261 - 4487
Alignment:
Q  17 atcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagatta 116  Q
    ||||||||||| ||||| || ||  ||||| | |||||||||||| |||| | ||| ||||| || ||||| || || |||||  || |||| ||||||     
T  4261 atcaagagagcgattggttaccagaagatccgtgtcttttctgagctggtgagcagttgcaggatatatgaggaggataccaagacttattacaagattg 4360  T
Q  117 tgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaa 216  Q
    ||| |||| |||     || || || |||| |||||||||||||||||||||||||||||| ||||  || ||||| |||  |||||| ||| |||| ||    
T  4361 tgaatgagcggaaaaccaaaggtcagcagagtcgtcctaagccttacagtgctcctgctgataaggataaacagagaatggttgatgataggcggcctaa 4460  T
Q  217 gaggagggatgctcctgttgatattgt 243  Q
    || ||  ||||||||||| || |||||    
T  4461 gaagaaagatgctcctgtggagattgt 4487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 40330 - 40388
Alignment:
Q  134 aagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagag 192  Q
    ||||| ||||||| ||||||||||||||||||||| |||||||| |||||||| |||||    
T  40330 aagggtcaacagagtcgtcctaagccttacagtgcccctgctgataagggaaaacagag 40388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 258
Target Start/End: Complemental strand, 32474 - 32236
Alignment:
Q  20 aagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatga 119  Q
    ||||| || ||||| || ||||||||| |||| || ||  ||||||| ||||| |||||||||||||| || || ||||| |||||||| ||| || |||    
T  32474 aagagggcaattggataccaacagatccgagttttctccaagttggtgaacagttgcagaatttatgaggaggataccaaggctcattacaaggttgtga 32375  T
Q  120 gtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagag 219  Q
     |||| ||| |  |||||| || |||| ||| |||||||| || || || | |||||| ||||| || || || |||   ||||| ||| |||| ||||     
T  32374 atgagcggaagactaagggccagcagagtcgccctaagccctatagcgcccttgctgataagggcaaacaaagaatggtcgatgataggcggcctaagaa 32275  T
Q  220 gagggatgctcctgttgatattgtttgttataagtgtgg 258  Q
    || ||||||||||| ||| ||||| |||| ||| |||||    
T  32274 gaaggatgctcctgctgagattgtctgttttaattgtgg 32236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 248
Target Start/End: Original strand, 10062 - 10176
Alignment:
Q  134 aagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctg 233  Q
    ||||| || |||| ||| ||||| ||||| ||||| | |||||| ||||| |||||||| |||   ||||| ||| |||| |||| || |||||||||||    
T  10062 aagggtcagcagagtcgccctaaaccttatagtgcccttgctgataagggcaagcagagaatggtcgatgataggcggccaaagaagaaggatgctcctg 10161  T
Q  234 ttgatattgtttgtt 248  Q
      |||||||||||||    
T  10162 cggatattgtttgtt 10176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 248
Target Start/End: Original strand, 12717 - 12831
Alignment:
Q  134 aagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctg 233  Q
    ||||| || |||| ||| ||||| ||||| ||||| | |||||| ||||| |||||||| |||   ||||| ||| |||| |||| || |||||||||||    
T  12717 aagggtcagcagagtcgccctaaaccttatagtgcccttgctgataagggcaagcagagaatggtcgatgataggcggccaaagaagaaggatgctcctg 12816  T
Q  234 ttgatattgtttgtt 248  Q
      |||||||||||||    
T  12817 cggatattgtttgtt 12831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 233
Target Start/End: Complemental strand, 37093 - 36880
Alignment:
Q  20 aagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatga 119  Q
    ||||| || ||||| || ||||||||| |||| ||| |||| ||||| ||||  || ||||| ||||| || ||||||||||||||||| ||| || | |    
T  37093 aagagggcaattggataccaacagatccgagtttttcctgatttggtgaacaactgtagaatctatgaggaggacaccaaagctcattacaaggttgtaa 36994  T
Q  120 gtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagag 219  Q
     |||| ||| |  |||||| || |||| ||  |||||||| || ||||| |||||||| ||||| || ||||| |||   ||||| ||| |||| ||||     
T  36993 atgagcggaagactaagggccagcagagtctccctaagccctatagtgcccctgctgataagggcaaacagagaatggtcgatgataggcggcctaagaa 36894  T
Q  220 gagggatgctcctg 233  Q
    || |||||||||||    
T  36893 gaaggatgctcctg 36880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1881 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1881
Description:

Target: scaffold1881; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 232
Target Start/End: Original strand, 189 - 401
Alignment:
Q  20 aagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatga 119  Q
    ||||| || |||||||||||||| ||| |||| ||| |||| ||||| || || || ||||| |||||||| || ||||| |||||||| ||| || |||    
T  189 aagagggcaattgggtatcaacaaatccgagtttttcctgatttggtgaatagttgtagaatctatgaagaggataccaaggctcattacaaggttgtga 288  T
Q  120 gtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagag 219  Q
     |||| ||| |   ||||| || |||| ||| ||||||||||| | ||| |||||||| ||||| || || || |||   ||||| ||| |||| ||||     
T  289 atgagcggaagaccaagggccagcagagtcgccctaagccttatattgcccctgctgataagggcaaacaaagaatggtcgatgataggcggcctaagaa 388  T
Q  220 gagggatgctcct 232  Q
    || ||||||||||    
T  389 gaaggatgctcct 401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 243
Target Start/End: Complemental strand, 4023 - 3923
Alignment:
Q  143 cagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattg 242  Q
    |||| |||||||||| ||||||||||||||||||| ||||| || ||||| |||  |||||| ||| |||| |||| ||  |||||||||| ||| ||||    
T  4023 cagagtcgtcctaagtcttacagtgctcctgctgataagggtaaacagagaatggttgatgataggcggcctaagaagaaagatgctcctgctgaaattg 3924  T
Q  243 t 243  Q
    |    
T  3923 t 3923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 12395 - 12327
Alignment:
Q  164 agtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcct 232  Q
    ||||||||||||||||| |  || |||||| |||||||||||||||||||  ||||||| |||||||||    
T  12395 agtgctcctgctgacaaagataaacagaggctgaatgatgagaggaggccttagaggagagatgctcct 12327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 101 - 213
Target Start/End: Original strand, 216210 - 216322
Alignment:
Q  101 gctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatg 200  Q
    |||||||| ||| || ||| ||||||||  || ||||| || || | |||||| ||||||||||||||||||||||| ||||| ||||| ||  ||||||    
T  216210 gctcattacaaggttgtgaatgagaggaaaggcaagggtcagcaaagtcgtccaaagccttacagtgctcctgctgataagggtaagcaaagattgaatg 216309  T
Q  201 atgagaggaggcc 213  Q
    || | ||||||||    
T  216310 ataaaaggaggcc 216322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 177
Target Start/End: Complemental strand, 10965 - 10803
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||| || |||||| | ||||| ||| | || ||||| || || ||||| || |||||||| || ||||| ||||| || ||||    
T  10965 gacatcaagagggcgattggataccaacagcttagagt-tttccggatttggtcaatagctgcaggatctatgaagaggataccaaggctcactacaaga 10867  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga 177  Q
    |  |||  ||| ||| ||| |||||||| |||| |||||||||||| |||||||| ||||||||    
T  10866 tagtgaacgaggggaagggcaagggacagcagagtcgtcctaagccgtacagtgcccctgctga 10803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 243
Target Start/End: Complemental strand, 19117 - 19022
Alignment:
Q  148 tcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgt 243  Q
    |||||||||||||||||||||||||||||| ||||| || ||||| |||  |||||| ||| | ||||| | ||  || ||||||||||| |||||    
T  19117 tcgtcctaagccttacagtgctcctgctgataagggtaaacagagaatggttgatgataggcgccccaaaaagaaagaagctcctgttgaaattgt 19022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 208
Target Start/End: Complemental strand, 10184 - 10026
Alignment:
Q  50 gtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatc 149  Q
    |||||||||||| |||| | ||| |||||||||||||| || || |||||  ||||||| |||||  ||| |||| |||  |  |  || || |||| ||    
T  10184 gtcttttctgagctggtgagcagttgcagaatttatgaggaggataccaagactcattacaagatcgtgaatgagcggaaagccacaggtcagcagagtc 10085  T
Q  150 gtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagagg 208  Q
    |||||||||||||||||||||||||| | ||||| || || || |||  ||||||||||    
T  10084 gtcctaagccttacagtgctcctgctaataagggtaaacaaagaatggttgatgagagg 10026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 215
Target Start/End: Complemental strand, 2313 - 2152
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    |||||||| ||||| |  || |||||||| ||||| || || || ||||||||||| ||| || |||  |||||||  |||||  | || || | ||||     
T  2313 ttttctgaattggtgagtagttgcagaatctatgaggaggatacgaaagctcattacaaggttttgaaggagaggaaaggtaatagtcagcaaagtcgt- 2215  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggccca 215  Q
    ||||||||||||||||| | ||||| |||||  |||||||| ||||||||||||||| |||||    
T  2214 ctaagccttacagtgcttcggctgataagggtgagcagagggtgaatgatgagaggaagccca 2152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 196
Target Start/End: Complemental strand, 15424 - 15330
Alignment:
Q  102 ctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatg 196  Q
    ||||||| |||||| ||| |||| |||  | |||||| ||||||| ||| ||||||||||| ||||| |||||||| ||||| || |||||||||    
T  15424 ctcattacaagattgtgaatgagcggaaagctaagggtcaacagagtcgccctaagccttatagtgcccctgctgataagggcaaacagaggatg 15330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 196
Target Start/End: Complemental strand, 19911 - 19817
Alignment:
Q  102 ctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatg 196  Q
    ||||||| |||||| ||| |||| |||  | |||||| || |||| ||| ||||||||||| ||||| |||||||| |||||||| |||||||||    
T  19911 ctcattacaagattgtgaatgagcggaaagctaagggtcagcagagtcgccctaagccttatagtgcccctgctgataagggaaaacagaggatg 19817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 215
Target Start/End: Complemental strand, 15972 - 15810
Alignment:
Q  53 ttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtc 152  Q
    |||||||||||||| | ||| |||||||| ||||| || || || || |||||||| ||| || ||| ||||||||  || |||   |  || | |||||    
T  15972 ttttctgagttggtgagcagttgcagaatctatgaggaggatactaaggctcattacaaggttgtgaatgagaggaaaggcaagtttccgcaaagtcgtc 15873  T
Q  153 ctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggccca 215  Q
    | ||||||||||||||||||||||| ||||| || || ||  | |||||||||||| ||||||    
T  15872 caaagccttacagtgctcctgctgataagggcaaacaaagagttaatgatgagaggcggccca 15810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 248
Target Start/End: Complemental strand, 5575 - 5365
Alignment:
Q  38 caacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagg 137  Q
    ||||||||| |||| ||| |||| ||||| || || |||||||| ||||| || || || || |||||||| ||| || ||| |||| ||| |   ||||    
T  5575 caacagatccgagtttttcctgatttggtgaatagctgcagaatctatgatgaggatactaaggctcattacaaggttgtgaatgagcggaagaccaagg 5476  T
Q  138 gacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttga 237  Q
    | || |||| ||| ||||||||||| ||||| | |||||| ||||| || ||||| |||   ||||| ||| |||| |||| || |||||||||||  ||    
T  5475 gccagcagagtcgccctaagccttatagtgcccttgctgataagggcaaacagagaatggtcgatgataggcggcctaagaagaaggatgctcctgcgga 5376  T
Q  238 tattgtttgtt 248  Q
     ||||||||||    
T  5375 gattgtttgtt 5365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 258
Target Start/End: Complemental strand, 599 - 397
Alignment:
Q  56 tctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtccta 155  Q
    ||||||||||| | ||| ||||| |||||||| || ||||| || |||||||| ||| || ||  |||| ||| |  |||||| || |||| ||| ||||    
T  599 tctgagttggtgagcagttgcaggatttatgaggaggacactaaggctcattacaaggttgtgtatgagcggaagactaagggccagcagagtcgcccta 500  T
Q  156 agccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgttataagtg 255  Q
    ||||||| || || |||||||| ||||| || |||||||||   || || ||| |||| | || || ||||| ||||| ||| |||||||||| ||| ||    
T  499 agccttatagcgcccctgctgataagggcaaacagaggatggtcgaagataggcggccaaggaagaaggatgttcctgctgagattgtttgttttaattg 400  T
Q  256 tgg 258  Q
    |||    
T  399 tgg 397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 196
Target Start/End: Original strand, 10672 - 10765
Alignment:
Q  103 tcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatg 196  Q
    |||||| |||||| ||| |||| |||  | |||||| ||| ||| ||| ||||||||||||||||| |||||||| ||||| || |||||||||    
T  10672 tcattacaagattgtgaatgagcggaaagctaagggtcaaaagagtcgccctaagccttacagtgcccctgctgataagggcaaacagaggatg 10765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 208
Target Start/End: Original strand, 17809 - 17874
Alignment:
Q  143 cagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagagg 208  Q
    |||| |||||||||||||||||||||||||||||| ||||| ||  |||| |||  ||||||||||    
T  17809 cagagtcgtcctaagccttacagtgctcctgctgataagggtaaatagagaatggttgatgagagg 17874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 183
Target Start/End: Original strand, 14814 - 14851
Alignment:
Q  146 aatcgtcctaagccttacagtgctcctgctgacaaggg 183  Q
    |||||||||||||||||||||||||||||||| |||||    
T  14814 aatcgtcctaagccttacagtgctcctgctgataaggg 14851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 213
Target Start/End: Original strand, 13215 - 13376
Alignment:
Q  52 cttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgt 151  Q
    |||||||||| |||| | ||| || ||||| ||||| ||||| || || |||| |||  || || ||| ||||||||  || ||||| || || | | ||    
T  13215 cttttctgagctggtgagcagttgtagaatatatgaggaagatactaaggctcgttacgaggttgtgaatgagaggaaaggcaagggtcagcaaagttgt 13314  T
Q  152 cctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcc 213  Q
    || ||| ||| ||||||||||||||| ||||| ||||| ||  |||||||||||||||||||    
T  13315 ccaaagtcttgcagtgctcctgctgataagggtaagcaaagattgaatgatgagaggaggcc 13376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 42104 - 42039
Alignment:
Q  143 cagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagagg 208  Q
    |||| |||||||||||||||||||||| ||||||| ||||| || ||||| |||  ||||||||||    
T  42104 cagagtcgtcctaagccttacagtgcttctgctgataagggtaaacagagaatggttgatgagagg 42039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 75824 - 75759
Alignment:
Q  143 cagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagagg 208  Q
    |||| |||||||||||||||||||||| ||||||| ||||| || ||||| |||  ||||||||||    
T  75824 cagagtcgtcctaagccttacagtgcttctgctgataagggtaaacagagaatggttgatgagagg 75759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 750 - 854
Alignment:
Q  26 gccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgaga 125  Q
    |||||||| |||||  |||| |||  ||||||||||||||| |  || || || |||||||| || || |||||||||||||||||| | |||||||||     
T  750 gccattggttatcagaagattagaaacttttctgagttggtgagtagctgtaggatttatgaggatgataccaaagctcattataaggtgatgagtgagc 849  T
Q  126 ggagg 130  Q
    |||||    
T  850 ggagg 854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 196
Target Start/End: Complemental strand, 3403 - 3283
Alignment:
Q  76 cagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgct 175  Q
    |||||||||| | || ||||||| ||||||||| ||| || | | |||| ||| |  |||||| || |||| ||| ||||||||||| ||||| ||||||    
T  3403 cagaatttataaggaggacaccagagctcattacaaggttgttaatgagcggaagactaagggccagcagagtcgccctaagccttatagtgcccctgct 3304  T
Q  176 gacaagggaaagcagaggatg 196  Q
    || ||||| || |||||||||    
T  3303 gataagggcaaacagaggatg 3283  T

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Target: scaffold0177 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 192
Target Start/End: Original strand, 14750 - 14922
Alignment:
Q  20 aagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatga 119  Q
    ||||| || |||||||||||||| ||| |||| ||| |||| ||||| || || || ||||| ||| | || || ||||| |||||||| ||| || |||    
T  14750 aagagggcaattgggtatcaacaaatccgagtttttcctgatttggtgaatagttgtagaatctattaggaggataccaaggctcattacaaggttgtga 14849  T
Q  120 gtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagag 192  Q
     |||| ||| |  |||||| || |||| ||| |||||||| || ||||| |||||||| ||||| || |||||    
T  14850 atgagcggaagactaagggccagcagagtcgccctaagccctatagtgcccctgctgataagggcaaacagag 14922  T

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Target: scaffold0098 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 26049 - 25945
Alignment:
Q  26 gccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgaga 125  Q
    |||||||| |||||  |||| |||  ||||||||||||||| |  || || || |||||||| || || |||||||||||||||||| | |||||||||     
T  26049 gccattggttatcagaagattagaaacttttctgagttggtgagtagctgtaggatttatgaggatgataccaaagctcattataaggtgatgagtgagc 25950  T
Q  126 ggagg 130  Q
    |||||    
T  25949 ggagg 25945  T

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Target: scaffold0319 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 196
Target Start/End: Complemental strand, 7014 - 6919
Alignment:
Q  101 gctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatg 196  Q
    |||||||| |||||| ||| |||| ||| |  |||||| || |||| ||| ||||||||||||||||| |||||||| ||| | || |||||||||    
T  7014 gctcattacaagattgtgaatgagcggaagactaagggtcagcagagtcgccctaagccttacagtgcccctgctgataagtgcaaacagaggatg 6919  T

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Target: scaffold1423 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 196
Target Start/End: Original strand, 141 - 263
Alignment:
Q  74 tgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctg 173  Q
    ||||| |||||||| || || || || |||||||| |||||  ||| |||| ||| |  |||||| ||  ||| ||| ||||||||||||||||| ||||    
T  141 tgcaggatttatgatgaggatactaaggctcattacaagatcgtgaatgagcggaagactaagggtcagaagagtcgccctaagccttacagtgcccctg 240  T
Q  174 ctgacaagggaaagcagaggatg 196  Q
    |||| ||||| || |||||||||    
T  241 ctgataagggcaaacagaggatg 263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 248
Target Start/End: Complemental strand, 420 - 246
Alignment:
Q  74 tgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctg 173  Q
    ||||| || |||||||| || | |||||||||||| |||||| | | ||||| || |   ||| | || |||| ||| ||||| ||||| ||||| ||||    
T  420 tgcaggatctatgaagaggatatcaaagctcattacaagattgttaatgagaagaagaccaagagccagcagagtcgccctaaaccttatagtgcccctg 321  T
Q  174 ctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgtt 248  Q
    | || ||||| |||||||| |||   ||||| |||| ||| |||| || |||||||||||  |||||||||||||    
T  320 cagataagggcaagcagagaatggtcgatgataggaagccaaagaagaaggatgctcctgcggatattgtttgtt 246  T

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Target: scaffold0109 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 248
Target Start/End: Original strand, 12887 - 13061
Alignment:
Q  74 tgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctg 173  Q
    ||||| || |||||||| || | |||||||||||| |||||| | | ||||| || |   ||| | || |||| ||| ||||| ||||| ||||| ||||    
T  12887 tgcaggatctatgaagaggatatcaaagctcattacaagattgttaatgagaagaagaccaagagccagcagagtcgccctaaaccttatagtgcccctg 12986  T
Q  174 ctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcctgttgatattgtttgtt 248  Q
    | || ||||| |||||||| |||   ||||| |||| ||| |||| || |||||||||||  |||||||||||||    
T  12987 cagataagggcaagcagagaatggtcgatgataggaagccaaagaagaaggatgctcctgcggatattgtttgtt 13061  T

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Target: scaffold0109; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 41753 - 41592
Alignment:
Q  14 gacatcaagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataaga 113  Q
    ||||||||||| || ||||| || |||||| | ||||| ||| |  | ||||| || || ||||| || ||||||||  | ||||| ||||| |||||||    
T  41753 gacatcaagagggcgattggataccaacagcttagagtttttccgaatttggtcaatagctgcaggatctatgaagagaataccaaggctcactataaga 41654  T
Q  114 ttatgagtgagaggaggggtaagggacaacagaatcgtcctaagccttacagtgctcctgct 175  Q
    || |||  ||||||| ||| || ||||| |||| | |||||||||| |||| ||| ||||||    
T  41653 ttgtgaacgagaggaagggcaatggacagcagagttgtcctaagccgtacattgcccctgct 41592  T

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Target: scaffold2059 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold2059
Description:

Target: scaffold2059; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 231
Target Start/End: Original strand, 601 - 689
Alignment:
Q  143 cagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagaggatgaatgatgagaggaggcccaagaggagggatgctcc 231  Q
    |||| ||| ||||||||||| ||||| |||||||| ||||| || ||||| |||   ||||| ||| |||| |||| ||||||||||||    
T  601 cagagtcgccctaagccttatagtgcccctgctgataagggcaaacagagaatggtcgatgataggcggcctaagaagagggatgctcc 689  T

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Target: scaffold0501 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 403 - 347
Alignment:
Q  136 gggacaacagaatcgtcctaagccttacagtgctcctgctgacaagggaaagcagag 192  Q
    ||||||| ||| |||||||||||| |||||||| |||||||| ||||| || |||||    
T  403 gggacaatagagtcgtcctaagccgtacagtgcccctgctgataagggcaaacagag 347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 15288 - 15376
Alignment:
Q  20 aagagagccattgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcatta 108  Q
    ||||| || ||||| || ||||||||| |||| ||| |||| ||||| ||||| || ||||| ||||| || ||||| |||||||||||    
T  15288 aagagggcaattggataccaacagatctgagtttttcctgatttggtgaacagctgtagaatctatgaggaggacacgaaagctcatta 15376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 177
Target Start/End: Complemental strand, 30873 - 30725
Alignment:
Q  29 attgggtatcaacagatcagagtcttttctgagttggttaacaggtgcagaatttatgaagaagacaccaaagctcattataagattatgagtgagagga 128  Q
    ||||| || ||| ||||| |||| || || |||||||| | ||| | ||| |||||||| || ||||| || | |||||| |||||| ||| |||| |||    
T  30873 attggttaccaaaagatccgagttttctccgagttggtgagcagttacaggatttatgaggaggacactaaggttcattacaagattgtgaatgagcgga 30774  T
Q  129 ggggtaagggacaacagaatcgtcctaagccttacagtgctcctgctga 177  Q
     |   | ||||||||||| || ||||||||| |||||||| ||||||||    
T  30773 agaccaggggacaacagagtcatcctaagccgtacagtgcccctgctga 30725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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