View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8941_low_57 (Length: 237)
Name: NF8941_low_57
Description: NF8941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8941_low_57 |
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Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 41083504 - 41083724
Alignment:
| Q |
1 |
agaaaaatatcatcaaatagttggcctgcaacaaataattgaaacctttcgagacatttccatgttccacagtccataacaacaaaatgtcaccaaatct |
100 |
Q |
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| T |
41083504 |
agaaaaatatcatcaaatagttggcctgcgacaaataattgaaacctttcgagacatttccatgttccacagtccataacaacaaaatgtcaccaaatct |
41083603 |
T |
|
| Q |
101 |
tgtttgttttcctttcctggaatctttgtcgcaaaacaggaagattaatttcacgtttaacgcaatgaagaaattgccaaggaatattgaaaattggagc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
41083604 |
tgtttgttttcctttcctggaatctttgtcgcaaaacaggaagattaatttcacgtttaacgcaatgaagaaattgccaaggaatattaaaaattggagc |
41083703 |
T |
|
| Q |
201 |
tggataatcgtaccttgtaat |
221 |
Q |
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|||||||| |||||||||||| |
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| T |
41083704 |
tggataattgtaccttgtaat |
41083724 |
T |
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