View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8941_low_72 (Length: 204)

Name: NF8941_low_72
Description: NF8941
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8941_low_72
NF8941_low_72
[»] scaffold0577 (1 HSPs)
scaffold0577 (1-204)||(4830-5033)
[»] chr7 (19 HSPs)
chr7 (1-204)||(8716588-8716791)
chr7 (1-204)||(14549820-14550023)
chr7 (1-204)||(18286349-18286552)
chr7 (1-200)||(13656657-13656856)
chr7 (1-204)||(16466902-16467105)
chr7 (1-204)||(48803146-48803349)
chr7 (1-83)||(15921409-15921491)
chr7 (1-141)||(20106988-20107128)
chr7 (5-83)||(15064480-15064558)
chr7 (1-204)||(824342-824554)
chr7 (5-61)||(16150972-16151028)
chr7 (4-54)||(16761252-16761302)
chr7 (4-54)||(16530733-16530783)
chr7 (4-54)||(16634879-16634929)
chr7 (4-61)||(13672545-13672602)
chr7 (4-61)||(18594738-18594795)
chr7 (4-61)||(18616889-18616946)
chr7 (153-204)||(15918056-15918107)
chr7 (155-204)||(15064639-15064688)
[»] chr5 (19 HSPs)
chr5 (1-204)||(15734258-15734461)
chr5 (1-204)||(25008070-25008273)
chr5 (1-204)||(20620887-20621090)
chr5 (1-204)||(23746775-23746978)
chr5 (2-204)||(22318771-22318973)
chr5 (5-141)||(22947147-22947283)
chr5 (5-80)||(18071600-18071675)
chr5 (5-80)||(20597290-20597365)
chr5 (5-80)||(20603587-20603662)
chr5 (5-80)||(20609906-20609981)
chr5 (1-55)||(23520623-23520677)
chr5 (4-61)||(20439633-20439690)
chr5 (5-61)||(20792252-20792308)
chr5 (4-54)||(25117622-25117672)
chr5 (4-54)||(25176713-25176763)
chr5 (151-204)||(21387181-21387234)
chr5 (4-61)||(24954646-24954703)
chr5 (17-141)||(21387035-21387159)
chr5 (5-60)||(26846356-26846411)
[»] chr3 (29 HSPs)
chr3 (1-204)||(7599080-7599283)
chr3 (1-204)||(15630243-15630446)
chr3 (1-204)||(13196716-13196919)
chr3 (1-204)||(13137456-13137659)
chr3 (1-204)||(13188704-13188907)
chr3 (1-204)||(12188362-12188565)
chr3 (1-204)||(16374766-16374969)
chr3 (1-204)||(12194776-12194979)
chr3 (1-204)||(10145735-10145938)
chr3 (112-200)||(13689502-13689590)
chr3 (1-141)||(3278182-3278322)
chr3 (1-147)||(17386469-17386615)
chr3 (1-82)||(14446983-14447064)
chr3 (5-147)||(4369390-4369532)
chr3 (1-83)||(13693591-13693673)
chr3 (1-147)||(20157809-20157955)
chr3 (5-80)||(22165754-22165829)
chr3 (8-128)||(12161466-12161586)
chr3 (5-80)||(10603983-10604058)
chr3 (5-80)||(16654406-16654481)
chr3 (4-54)||(3340668-3340718)
chr3 (4-54)||(13505991-13506041)
chr3 (4-54)||(15945276-15945326)
chr3 (4-61)||(10161657-10161714)
chr3 (4-61)||(15643767-15643824)
chr3 (151-204)||(3278344-3278397)
chr3 (5-61)||(12423817-12423873)
chr3 (156-204)||(13505802-13505850)
chr3 (152-204)||(13693754-13693806)
[»] chr2 (19 HSPs)
chr2 (1-204)||(22045947-22046150)
chr2 (1-204)||(25356236-25356439)
chr2 (1-204)||(12901-13104)
chr2 (1-204)||(27626318-27626521)
chr2 (1-204)||(24170064-24170261)
chr2 (1-147)||(25372320-25372466)
chr2 (1-128)||(24821486-24821613)
chr2 (5-83)||(17867467-17867545)
chr2 (149-204)||(25146078-25146133)
chr2 (1-60)||(25369016-25369075)
chr2 (151-204)||(25368908-25368961)
chr2 (4-54)||(23160851-23160901)
chr2 (4-54)||(23572108-23572158)
chr2 (4-54)||(27630195-27630245)
chr2 (4-54)||(116220-116270)
chr2 (4-61)||(16774345-16774402)
chr2 (4-61)||(24796764-24796821)
chr2 (151-201)||(26192912-26192962)
chr2 (151-204)||(17867337-17867390)
[»] chr8 (21 HSPs)
chr8 (1-204)||(22100912-22101115)
chr8 (1-204)||(21380817-21381020)
chr8 (1-204)||(8313192-8313395)
chr8 (1-204)||(8324138-8324341)
chr8 (1-204)||(22034817-22035020)
chr8 (1-204)||(22097947-22098150)
chr8 (1-200)||(16419891-16420090)
chr8 (1-204)||(21954803-21955006)
chr8 (1-147)||(22830614-22830760)
chr8 (1-141)||(21942816-21942956)
chr8 (1-122)||(21100218-21100339)
chr8 (1-122)||(22289752-22289873)
chr8 (1-63)||(17132523-17132585)
chr8 (1-83)||(11348365-11348447)
chr8 (1-83)||(22368672-22368754)
chr8 (5-80)||(19766186-19766261)
chr8 (4-141)||(21826100-21826237)
chr8 (5-61)||(29333300-29333356)
chr8 (151-204)||(11348235-11348288)
chr8 (151-204)||(22289899-22289952)
chr8 (148-204)||(21100100-21100156)
[»] chr4 (6 HSPs)
chr4 (1-204)||(22109684-22109887)
chr4 (1-204)||(15253069-15253273)
chr4 (1-61)||(3353304-3353364)
chr4 (4-141)||(15261448-15261585)
chr4 (1-146)||(15864217-15864362)
chr4 (4-61)||(13821597-13821654)
[»] scaffold0473 (1 HSPs)
scaffold0473 (1-204)||(12762-12965)
[»] chr1 (10 HSPs)
chr1 (1-204)||(20236205-20236408)
chr1 (5-204)||(19876961-19877172)
chr1 (1-120)||(8651737-8651856)
chr1 (1-119)||(20072316-20072434)
chr1 (1-81)||(8948863-8948943)
chr1 (4-54)||(20392180-20392230)
chr1 (4-61)||(21800143-21800200)
chr1 (5-61)||(3988798-3988854)
chr1 (5-128)||(19783722-19783845)
chr1 (151-204)||(8651899-8651952)
[»] scaffold1571 (1 HSPs)
scaffold1571 (1-204)||(1346-1549)
[»] chr6 (10 HSPs)
chr6 (1-204)||(24856531-24856734)
chr6 (1-143)||(8725349-8725491)
chr6 (1-204)||(18010572-18010773)
chr6 (1-141)||(18446920-18447060)
chr6 (1-54)||(21561926-21561979)
chr6 (4-61)||(20017709-20017766)
chr6 (4-61)||(22167024-22167081)
chr6 (4-55)||(22768605-22768656)
chr6 (151-204)||(18447082-18447135)
chr6 (151-204)||(25966518-25966571)
[»] scaffold0020 (2 HSPs)
scaffold0020 (1-204)||(115371-115574)
scaffold0020 (1-204)||(119675-119878)
[»] scaffold0216 (1 HSPs)
scaffold0216 (1-204)||(10141-10344)
[»] scaffold0375 (1 HSPs)
scaffold0375 (5-200)||(11257-11452)
[»] scaffold0402 (1 HSPs)
scaffold0402 (1-204)||(6598-6813)
[»] scaffold1620 (1 HSPs)
scaffold1620 (1-204)||(282-479)
[»] scaffold1879 (1 HSPs)
scaffold1879 (1-204)||(209-406)
[»] scaffold0215 (1 HSPs)
scaffold0215 (1-122)||(8390-8511)
[»] scaffold0117 (2 HSPs)
scaffold0117 (100-204)||(32864-32968)
scaffold0117 (1-79)||(32965-33043)
[»] scaffold0116 (1 HSPs)
scaffold0116 (1-204)||(39027-39224)
[»] scaffold0231 (2 HSPs)
scaffold0231 (2-128)||(21631-21757)
scaffold0231 (151-200)||(21792-21841)
[»] scaffold0059 (2 HSPs)
scaffold0059 (1-83)||(10859-10941)
scaffold0059 (1-83)||(18860-18942)
[»] scaffold0037 (2 HSPs)
scaffold0037 (1-83)||(44146-44228)
scaffold0037 (1-83)||(51535-51617)
[»] scaffold0013 (1 HSPs)
scaffold0013 (1-83)||(234457-234539)
[»] scaffold1095 (2 HSPs)
scaffold1095 (1-85)||(1988-2072)
scaffold1095 (154-204)||(2153-2203)
[»] scaffold0091 (1 HSPs)
scaffold0091 (1-116)||(54965-55080)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-83)||(132342-132424)
scaffold0026 (151-204)||(132501-132554)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-59)||(253240-253298)
scaffold0004 (1-61)||(19417-19477)
[»] scaffold0506 (1 HSPs)
scaffold0506 (1-128)||(3443-3570)
[»] scaffold0273 (1 HSPs)
scaffold0273 (5-80)||(24047-24122)
[»] scaffold0142 (1 HSPs)
scaffold0142 (5-80)||(22443-22518)
[»] scaffold0029 (1 HSPs)
scaffold0029 (5-80)||(122069-122144)
[»] scaffold0018 (1 HSPs)
scaffold0018 (5-128)||(19652-19775)
[»] scaffold0974 (1 HSPs)
scaffold0974 (154-204)||(1-51)
[»] scaffold0525 (1 HSPs)
scaffold0525 (5-147)||(856-997)
[»] scaffold0346 (2 HSPs)
scaffold0346 (1-59)||(5035-5093)
scaffold0346 (152-204)||(4878-4930)
[»] scaffold0156 (1 HSPs)
scaffold0156 (1-59)||(7938-7996)
[»] scaffold0230 (1 HSPs)
scaffold0230 (5-61)||(12170-12226)
[»] scaffold0078 (1 HSPs)
scaffold0078 (4-54)||(29197-29247)
[»] scaffold0022 (2 HSPs)
scaffold0022 (4-54)||(24258-24308)
scaffold0022 (156-204)||(24449-24497)
[»] scaffold0146 (1 HSPs)
scaffold0146 (5-55)||(21572-21622)
[»] scaffold0051 (1 HSPs)
scaffold0051 (4-52)||(25859-25907)


Alignment Details
Target: scaffold0577 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 4830 - 5033
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4830 cttcctaacccatctcggactaaccccgaggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 4929  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  4930 aaggtgcacacatgcaccatgaagaggagccccatgaccataacgccgacaatgaaagatgggcatggatgcaaaccgaggtacaaaggataagcaccga 5029  T
Q  201 gcaa 204  Q
    ||||    
T  5030 gcaa 5033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 180; Significance: 2e-97; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 8716588 - 8716791
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8716588 cttcctaacccatctcggactaaccccgaggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 8716687  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  8716688 aaggtgcacacatgcaccatgaagaggagccccatgaccataacgacaacaatgaaagatgggcatggatgcaaaccgaggtacaaaggataagcaccga 8716787  T
Q  201 gcaa 204  Q
    ||||    
T  8716788 gcaa 8716791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 14549820 - 14550023
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  14549820 cttcctaacccatctcggactaaccccgaggtggaggaaaatttgttgtatgttggtgatggattactggtacatgaagagcataatcaaggtgacgaag 14549919  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  14549920 aaggtgcacacatgcaccatgaagaggagccccatgaccataacgacaacaatgaaagatgggcatggatgcaaaccgaggtacaaaggataagcaccga 14550019  T
Q  201 gcaa 204  Q
    ||||    
T  14550020 gcaa 14550023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 18286349 - 18286552
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18286349 cttcctaacccatctcggactaaccccgaggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcattatcaaggtgacgaag 18286448  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    ||||||| ||||||||||||||||||||||||| ||||||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  18286449 aaggtgcccacatgcaccatgaagaggagccccatgaccataacgacaacaatgaaagatgggcatggatgcaaaccgaggtacaaaggataagcaccga 18286548  T
Q  201 gcaa 204  Q
    ||||    
T  18286549 gcaa 18286552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 13656657 - 13656856
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||| ||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13656657 cttcctaacccatctcggactaacaccgaggtggaggcgaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgaagaag 13656756  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    | |||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13656757 acggtgcaaatatgcaccatgaagaggagccccatgaccataatgccaacaatgaaagatgggcatggatgcaaactgaggtacaaaggataagcaccga 13656856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 16467105 - 16466902
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16467105 cttcgtaacccatctcggactaaccccgaggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 16467006  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    |||||||||||||||||||||||||||| |||| ||||||||| |   |||||||||||||||| ||||||||||| |||||||| ||||||||||||||    
T  16467005 aaggtgcacacatgcaccatgaagaggaaccccatgaccataacgatgacaatgaaagatgggcatggatgcaaaccgaggtacagaggataagcaccga 16466906  T
Q  201 gcaa 204  Q
    ||||    
T  16466905 gcaa 16466902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 48803349 - 48803146
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||| ||| |||||| | |||||||||||||||||||||||| | |||||||||||||||||||||||||||||| || |    
T  48803349 cttcctaacccatctcggactaacaccgaggtggaagcaaatttgttgtatgttggtgatggttcacaggtacatgaagagcataatcaaggtgaggacg 48803250  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    |||||||| || |||||||||||||| ||| || ||||||| ||||| | |||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  48803249 aaggtgcaaacttgcaccatgaagagaagcaccatgaccatgatgccgaaaatggaagatgggcatggatgcaaactgaggtacaaaggataagcaccga 48803150  T
Q  201 gcaa 204  Q
    ||||    
T  48803149 gcaa 48803146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 15921491 - 15921409
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagca 83  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||| | |  |||||||||||||||||    
T  15921491 cttcctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttggtgatagttcgcaggtacatgaagagca 15921409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 20106988 - 20107128
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||  |  ||||| ||||||||||| | |   || || || |    
T  20106988 cttcctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttggtgatgtttcgcaggtgcatgaagagcacattgctggagaagagg 20107087  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccat 141  Q
    |||||| |||| |||||||||  ||||||| || |||||||    
T  20107088 aaggtgtacacttgcaccatgctgaggagcaccatgaccat 20107128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 15064480 - 15064558
Alignment:
Q  5 ctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagca 83  Q
    |||||||||||||||||||| ||| |||||| |||||||||||||||||||||||| | |  |||||||||||||||||    
T  15064480 ctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttggtgatagttcgcaggtacatgaagagca 15064558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 824342 - 824554
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||| ||| |||||| ||||||||||| ||| |||||||| | |  ||||||||||||||||| | |     ||| || |    
T  824342 cttcctaacccatctcggactaacaccgaggtggaagaaaatttgttttatattggtgatagttcgcaggtacatgaagagcacatt---attgaagagg 824438  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgcc------aac------aatgaaagatgggcttggatgcaaactgaggtacaaag 188  Q
    ||||||||||| ||||||| |||||||| | || ||||||| |  ||      |||      |||||||||||| | |||||||||||||||||  ||||    
T  824439 aaggtgcacacctgcaccaagaagaggatcaccatgaccatgaaaccggacgaaacaatgataatgaaagatggacatggatgcaaactgaggttgaaag 824538  T
Q  189 gataagcaccgagcaa 204  Q
    ||||||||||||||||    
T  824539 gataagcaccgagcaa 824554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 16151028 - 16150972
Alignment:
Q  5 ctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatg 61  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||    
T  16151028 ctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttgttgatg 16150972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 16761302 - 16761252
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgtt 54  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||||||||||    
T  16761302 cctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgtt 16761252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 16530733 - 16530783
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgtt 54  Q
    ||||||||||||| ||||||| ||| |||||| ||||||||||||||||||    
T  16530733 cctaacccatctcagactaacaccgaggtggaagaaaatttgttgtatgtt 16530783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 16634929 - 16634879
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgtt 54  Q
    ||||||||||||| ||||||| ||| |||||| ||||||||||||||||||    
T  16634929 cctaacccatctcagactaacaccgaggtggaagaaaatttgttgtatgtt 16634879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 13672545 - 13672602
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatg 61  Q
    |||||||||||||| |||||| ||| |||||| | ||||||||||||||||| |||||    
T  13672545 cctaacccatctcgaactaacaccgaggtggaagcaaatttgttgtatgttgatgatg 13672602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 18594795 - 18594738
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatg 61  Q
    |||||||||||||| |||||| ||| |||||| | ||||||||||||||||| |||||    
T  18594795 cctaacccatctcgaactaacaccgaggtggaagcaaatttgttgtatgttgatgatg 18594738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 18616889 - 18616946
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatg 61  Q
    |||||||||||||| |||||| ||| |||||| | ||||||||||||||||| |||||    
T  18616889 cctaacccatctcgaactaacaccgaggtggaagcaaatttgttgtatgttgatgatg 18616946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 15918107 - 15918056
Alignment:
Q  153 tgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccgagcaa 204  Q
    |||||||||| | | |||||||||||||||  ||||||||||||||||||||    
T  15918107 tgaaagatggacatcgatgcaaactgaggttgaaaggataagcaccgagcaa 15918056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 204
Target Start/End: Original strand, 15064639 - 15064688
Alignment:
Q  155 aaagatgggcttggatgcaaactgaggtacaaaggataagcaccgagcaa 204  Q
    |||||||| | ||||||||||| |||||  ||||||||||||||||||||    
T  15064639 aaagatggacatggatgcaaaccgaggttgaaaggataagcaccgagcaa 15064688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 180; Significance: 2e-97; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 15734258 - 15734461
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15734258 cttcctaacccatctcggactaaccccgaggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 15734357  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  15734358 aaggtgcacacatgcaccatgaagaggagccccatgaccataacgacaacaatgaaagatgggcatggatgcaaaccgaggtacaaaggataagcaccga 15734457  T
Q  201 gcaa 204  Q
    ||||    
T  15734458 gcaa 15734461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 25008273 - 25008070
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  25008273 cttcctaacccatctcggactaaccccgaggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacaaag 25008174  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    ||||||| ||||||||||||||||||||||||| ||||||||| | |||||||||||||||| | ||||||||||| |||||||||||||||||||||||    
T  25008173 aaggtgcccacatgcaccatgaagaggagccccatgaccataacgacaacaatgaaagatggacatggatgcaaaccgaggtacaaaggataagcaccga 25008074  T
Q  201 gcaa 204  Q
    ||||    
T  25008073 gcaa 25008070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 164; E-Value: 7e-88
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 20620887 - 20621090
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20620887 cttcctaacccatctcggactaaccccaaggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 20620986  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    ||||||| ||||||||||||||||| |||| || ||||||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  20620987 aaggtgcccacatgcaccatgaagaagagcgccatgaccataacgacaacaatgaaagatgggcatggatgcaaaccgaggtacaaaggataagcaccga 20621086  T
Q  201 gcaa 204  Q
    ||||    
T  20621087 gcaa 20621090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 164; E-Value: 7e-88
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 23746775 - 23746978
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  23746775 cttcctaacccatctcggactaaccccgaggtggaggaaaatttgttgtatgttggtgatagattacaggtacatgaagagcataatcaaggtgacgacg 23746874  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    ||||||||||| ||||||||||||||||| ||| ||||||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  23746875 aaggtgcacacttgcaccatgaagaggagacccatgaccataacgacaacaatgaaagatgggcatggatgcaaaccgaggtacaaaggataagcaccga 23746974  T
Q  201 gcaa 204  Q
    ||||    
T  23746975 gcaa 23746978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 2 - 204
Target Start/End: Complemental strand, 22318973 - 22318771
Alignment:
Q  2 ttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaaga 101  Q
    ||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  22318973 ttcctaacccatctcggactaacaccgaggtggaggcaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgaagagga 22318874  T
Q  102 aggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccgag 201  Q
    ||||||| || |||||||||||||||| |||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22318873 aggtgcaaacgtgcaccatgaagaggaaccccatgaccataatgccgacaatgaaagatgggcatggatgcaaactgaggtacaaaggataagcaccgag 22318774  T
Q  202 caa 204  Q
    |||    
T  22318773 caa 22318771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 141
Target Start/End: Original strand, 22947147 - 22947283
Alignment:
Q  5 ctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaagaagg 104  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||   |||||||||||||||||| |||| |||||  || |||||    
T  22947147 ctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttggtgatggtccacaggtacatgaagagcacaatctaggtgtggaggaagg 22947246  T
Q  105 tgcacacatgcaccatgaagaggagccccgtgaccat 141  Q
    |||| || |||||||||  ||||||| || |||||||    
T  22947247 tgcaaacttgcaccatgttgaggagcaccatgaccat 22947283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 18071600 - 18071675
Alignment:
Q  5 ctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaaga 80  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||    |||||||||||||||    
T  18071600 ctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttgttgatgatccacaggtacatgaaga 18071675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 20597365 - 20597290
Alignment:
Q  5 ctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaaga 80  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||    |||||||||||||||    
T  20597365 ctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttgttgatgatccacaggtacatgaaga 20597290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 20603662 - 20603587
Alignment:
Q  5 ctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaaga 80  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||    |||||||||||||||    
T  20603662 ctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttgttgatgatccacaggtacatgaaga 20603587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 20609981 - 20609906
Alignment:
Q  5 ctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaaga 80  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||    |||||||||||||||    
T  20609981 ctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttgttgatgatccacaggtacatgaaga 20609906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 23520677 - 23520623
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttg 55  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||||||||||||    
T  23520677 cttcctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttg 23520623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 20439690 - 20439633
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatg 61  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||    
T  20439690 cctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttgatgatg 20439633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 20792308 - 20792252
Alignment:
Q  5 ctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatg 61  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||    
T  20792308 ctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttgttgatg 20792252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 25117672 - 25117622
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgtt 54  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||||||||||    
T  25117672 cctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgtt 25117622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 25176763 - 25176713
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgtt 54  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||||||||||    
T  25176763 cctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgtt 25176713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 204
Target Start/End: Original strand, 21387181 - 21387234
Alignment:
Q  151 aatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccgagcaa 204  Q
    |||||||| ||||| |||||||||||||||||  ||||||||||||||||||||    
T  21387181 aatgaaaggtgggcatggatgcaaactgaggttgaaaggataagcaccgagcaa 21387234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 24954703 - 24954646
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatg 61  Q
    |||||||||||||| |||||| ||| |||||| | ||||||||||||||||| |||||    
T  24954703 cctaacccatctcgaactaacaccgaggtggaagcaaatttgttgtatgttgatgatg 24954646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 141
Target Start/End: Original strand, 21387035 - 21387159
Alignment:
Q  17 ggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaagaaggtgcacacatgca 116  Q
    |||||||| ||| |||||| | |||||| ||||||||||||||||     |||||||||| || ||| |||   ||||| || ||||||||| || ||||    
T  21387035 ggactaacaccgaggtggaagcaaattttttgtatgttggtgatgatcctcaggtacatggagtgcacaatgttggtgaggaggaaggtgcaaacttgca 21387134  T
Q  117 ccatgaagaggagccccgtgaccat 141  Q
    |||||| ||||||| || |||||||    
T  21387135 ccatgatgaggagcaccatgaccat 21387159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 26846356 - 26846411
Alignment:
Q  5 ctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgat 60  Q
    ||||||||||| ||| |||| ||| |||||| ||||||||||||||||||| ||||    
T  26846356 ctaacccatcttggaataacaccgaggtggaagaaaatttgttgtatgttgttgat 26846411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 180; Significance: 2e-97; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 7599080 - 7599283
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7599080 cttcctaacccatctcggactaaccccgaggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 7599179  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  7599180 aaggtgcacacatgcaccatgaagaggagccccatgaccataacgacaacaatgaaagatgggcatggatgcaaaccgaggtacaaaggataagcaccga 7599279  T
Q  201 gcaa 204  Q
    ||||    
T  7599280 gcaa 7599283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 15630446 - 15630243
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15630446 cttcctaacccatctcggactaaccccgaggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 15630347  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    ||||||| ||||||||||||||||||||||||| ||||||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  15630346 aaggtgcccacatgcaccatgaagaggagccccatgaccataacgacaacaatgaaagatgggcatggatgcaaaccgaggtacaaaggataagcaccga 15630247  T
Q  201 gcaa 204  Q
    ||||    
T  15630246 gcaa 15630243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 13196919 - 13196716
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13196919 cttcctaacccatctcggactaacaccgaggtggaggcaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgaagaag 13196820  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    | |||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13196819 acggtgcaaacatgcactatgaagaggagccccatgaccataatgccaacaatgaaagatgggcatggatgcaaactgaggtacaaaggataagcaccga 13196720  T
Q  201 gcaa 204  Q
    ||||    
T  13196719 gcaa 13196716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 164; E-Value: 7e-88
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 13137659 - 13137456
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13137659 cttcctaacccatctcggactaaccccgaggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcatcatcaaggtgacgaag 13137560  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    ||||||| |||||||||||||| |||||||||| ||||||||| | |||||||||| ||||||| ||||||||||| |||||||||||||||||||||||    
T  13137559 aaggtgcccacatgcaccatgaggaggagccccatgaccataacgacaacaatgaacgatgggcatggatgcaaaccgaggtacaaaggataagcaccga 13137460  T
Q  201 gcaa 204  Q
    ||||    
T  13137459 gcaa 13137456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 164; E-Value: 7e-88
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 13188907 - 13188704
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13188907 cttcctaacccatctcggactaaccccgaggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 13188808  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    | ||||| ||||||||||||||||| ||||||| ||||||||| | |||||||||||||||||| ||||||||||| ||||||||||||||| |||||||    
T  13188807 agggtgctcacatgcaccatgaagaagagccccatgaccataacgacaacaatgaaagatgggcatggatgcaaaccgaggtacaaaggataggcaccga 13188708  T
Q  201 gcaa 204  Q
    ||||    
T  13188707 gcaa 13188704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 12188565 - 12188362
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12188565 cttcctaacccatctcggactaaccccgaggtggaggaaaatttgtagtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 12188466  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    | ||||| ||||||||||||||||| ||||||| ||||||||| | |||||||||||||||||| ||||||||||| ||||||||||||||||| |||||    
T  12188465 agggtgcccacatgcaccatgaagaagagccccatgaccataacgacaacaatgaaagatgggcatggatgcaaaccgaggtacaaaggataagaaccga 12188366  T
Q  201 gcaa 204  Q
    ||||    
T  12188365 gcaa 12188362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 16374969 - 16374766
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16374969 cttcctaacccatctcggactaaccccgaggtggaggaaaatttcttgtatgttggtgatggattacaggtacatgaagaacataatcaaggtgacgaag 16374870  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    | ||||| ||||||||||||||||| ||||||| ||||||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  16374869 agggtgcccacatgcaccatgaagaagagccccatgaccataacgacaacaatgaaagatgggcatggatgcaaaccgaggtacaaaggataagcaccga 16374770  T
Q  201 gcaa 204  Q
    ||||    
T  16374769 gcaa 16374766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 156; E-Value: 4e-83
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 12194979 - 12194776
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12194979 cttcctaacccatctcggactaaccccgaggtggaggaaaatttgtagtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 12194880  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    | ||||| ||||||||||||||||| ||||||| ||||||||| | |||||||||||| ||||| ||||||||||| ||||||||||||||||| |||||    
T  12194879 agggtgcccacatgcaccatgaagaagagccccatgaccataacgacaacaatgaaaggtgggcatggatgcaaaccgaggtacaaaggataagaaccga 12194780  T
Q  201 gcaa 204  Q
    ||||    
T  12194779 gcaa 12194776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 10145735 - 10145938
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||    
T  10145735 cttcctaacccatctcggactaaccccgaggtggaggaaaatttgttgtatgttggtgatggattacaggtacacgaggagcataatcaaggtgacgaag 10145834  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    | ||||| ||||||||||||||||| ||||||| ||||||||| | | |||||||| ||||||| ||||||||||| |||||||||||||||||||||||    
T  10145835 agggtgctcacatgcaccatgaagaagagccccatgaccataacgacgacaatgaacgatgggcatggatgcaaaccgaggtacaaaggataagcaccga 10145934  T
Q  201 gcaa 204  Q
    ||||    
T  10145935 gcaa 10145938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 112 - 200
Target Start/End: Original strand, 13689502 - 13689590
Alignment:
Q  112 atgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13689502 atgcaccatgaagaggagccccatgaccataatgccaacaatgaaagatgggcatggatgcaaactgaggtacaaaggataagcaccga 13689590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 3278182 - 3278322
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||| ||| |||||| ||||||||| |||||||||||||||| | |||||||||||||||||| |||   || || || |    
T  3278182 cttcctaacccatctcggactaacaccgaggtggaagaaaatttgatgtatgttggtgatggttcacaggtacatgaagagcacaatgttggagaagagg 3278281  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccat 141  Q
    ||||||||||| |||||||||| ||||| | || |||||||    
T  3278282 aaggtgcacacttgcaccatgatgaggaacaccatgaccat 3278322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 17386469 - 17386615
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||| ||| |||||| ||||| ||  | ||||||||||| || | |||||||||||||||| | |||    | || || |    
T  17386469 cttcctaacccatctcggactaacaccgaggtggaagaaaaattaatatatgttggtgaaggttcacaggtacatgaagagaacaatgctagagaagagg 17386568  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgcc 147  Q
    ||||||||||| |||||||||| ||||||| || ||||||| |||||    
T  17386569 aaggtgcacacttgcaccatgatgaggagcaccatgaccatgatgcc 17386615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 14447064 - 14446983
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagc 82  Q
    |||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||    |||||||||||||||||    
T  14447064 cttcctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttgttgatgatccacaggtacatgaagagc 14446983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 4369390 - 4369532
Alignment:
Q  5 ctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaagaagg 104  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||    ||||||||||||||| ||  || | |  | ||| |||||    
T  4369390 ctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttgttgatgatccacaggtacatgaagaacacgataatgaaggcgaggaagg 4369489  T
Q  105 tgcacacatgcaccatgaagaggagccccgtgaccataatgcc 147  Q
    ||| ||  |||||||||| ||||||| || ||||||| |||||    
T  4369490 tgcgcaattgcaccatgatgaggagcaccatgaccatgatgcc 4369532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 13693591 - 13693673
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagca 83  Q
    |||||||||||||||| ||||||| ||| |||||| ||||||||||||||||||||||| |  |  |||||||||||||||||    
T  13693591 cttcctaacccatctcagactaacaccgaggtggatgaaaatttgttgtatgttggtgacgactcgcaggtacatgaagagca 13693673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 20157955 - 20157809
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    ||||||||||||||| |||||||| ||| |||| | ||||||||||||||||||| |||||    ||| |||||||||| |||  ||  ||  || || |    
T  20157955 cttcctaacccatcttggactaacaccgaggtgaaagaaaatttgttgtatgttgttgatgatccacatgtacatgaagcgcacgatgcagaagaagagg 20157856  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgcc 147  Q
    ||||||||||| |||||||||| ||||||| || ||||||| |||||    
T  20157855 aaggtgcacacttgcaccatgatgaggagcaccatgaccatgatgcc 20157809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 22165829 - 22165754
Alignment:
Q  5 ctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaaga 80  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||    |||||||||||||||    
T  22165829 ctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttgttgatgatccacaggtacatgaaga 22165754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 128
Target Start/End: Complemental strand, 12161586 - 12161466
Alignment:
Q  8 acccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaagaaggtgc 107  Q
    ||||||||||||||||| ||| |||||| ||||||||||||||||||  |||||    |||| | |||| ||| |||||| | |  ||||| ||||||||    
T  12161586 acccatctcggactaacaccgaggtggaagaaaatttgttgtatgttaatgatgacccacagatgcatgtagaacataataatgaagacgaggaaggtgc 12161487  T
Q  108 acacatgcaccatgaagagga 128  Q
    |||| ||||||| ||||||||    
T  12161486 acacttgcaccaagaagagga 12161466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 10604058 - 10603983
Alignment:
Q  5 ctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaaga 80  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||| ||| |||||    |||||||||||||||    
T  10604058 ctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatattgttgatgatccacaggtacatgaaga 10603983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 16654406 - 16654481
Alignment:
Q  5 ctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaaga 80  Q
    |||||||||||||||||||| ||| |||| | ||||||||||||||||||| |||||    |||||||||||||||    
T  16654406 ctaacccatctcggactaacaccgaggtgtaagaaaatttgttgtatgttgttgatgatccacaggtacatgaaga 16654481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 3340718 - 3340668
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgtt 54  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||||||||||    
T  3340718 cctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgtt 3340668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 13506041 - 13505991
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgtt 54  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||||||||||    
T  13506041 cctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgtt 13505991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 15945276 - 15945326
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgtt 54  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||||||||||    
T  15945276 cctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgtt 15945326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 10161714 - 10161657
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatg 61  Q
    |||||||||||||| |||||| ||| |||||| | ||||||||||||||||| |||||    
T  10161714 cctaacccatctcgcactaacaccgaggtggaagcaaatttgttgtatgttgctgatg 10161657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 15643767 - 15643824
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatg 61  Q
    |||||||||||||| |||||| ||| |||||| | ||||||||||||||||| |||||    
T  15643767 cctaacccatctcgaactaacaccgaggtggaagcaaatttgttgtatgttgctgatg 15643824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 151 - 204
Target Start/End: Original strand, 3278344 - 3278397
Alignment:
Q  151 aatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccgagcaa 204  Q
    |||||||||||||| |||||||||||||||||  | ||||||| |||| |||||    
T  3278344 aatgaaagatgggcatggatgcaaactgaggttgagaggataaacaccaagcaa 3278397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 12423873 - 12423817
Alignment:
Q  5 ctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatg 61  Q
    ||||| |||||||||||||| ||| |||||| |||||||| || ||||||| |||||    
T  12423873 ctaacacatctcggactaacaccgaggtggaagaaaatttcttttatgttgttgatg 12423817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Complemental strand, 13505850 - 13505802
Alignment:
Q  156 aagatgggcttggatgcaaactgaggtacaaaggataagcaccgagcaa 204  Q
    ||||||||| |||||| |||| |||||  ||||||||||||||||||||    
T  13505850 aagatgggcatggatgaaaaccgaggtcgaaaggataagcaccgagcaa 13505802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 13693754 - 13693806
Alignment:
Q  152 atgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccgagcaa 204  Q
    ||||||||||| | |||||| |||| |||||  ||||||||||||||||||||    
T  13693754 atgaaagatggacatggatgtaaaccgaggttgaaaggataagcaccgagcaa 13693806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 180; Significance: 2e-97; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 22046150 - 22045947
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22046150 cttcctaacccatctcggactaaccccgaggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 22046051  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  22046050 aaggtgcacacatgcaccatgaagaggagccccatgaccataacgacaacaatgaaagatgggcatggatgcaaaccgaggtacaaaggataagcaccga 22045951  T
Q  201 gcaa 204  Q
    ||||    
T  22045950 gcaa 22045947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 25356236 - 25356439
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25356236 cttcctaacccatctcggactaaccccgaggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 25356335  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  25356336 aaggtgcacacatgcaccatgaagaggagccccatgaccataacgacaacaatgaaagatgggcatggatgcaaaccgaggtacaaaggataagcaccga 25356435  T
Q  201 gcaa 204  Q
    ||||    
T  25356436 gcaa 25356439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 13104 - 12901
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13104 cttcctaacccatctcggactaaccccgaggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 13005  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||| ||||||||||| ||||||||||| |||||||||||    
T  13004 aaggtgcacacatgcaccatgaagaggagccccatgaccataacgacaacaatgaaagatgggcatggatgcaaaccgaggtacaaagaataagcaccga 12905  T
Q  201 gcaa 204  Q
    ||||    
T  12904 gcaa 12901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 27626318 - 27626521
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27626318 cttcctaacccatctcggactaaccccgaggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgaagaag 27626417  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    ||||||| ||||||||||||||||| ||||||| ||||||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  27626418 aaggtgcccacatgcaccatgaagaagagccccatgaccataacgacaacaatgaaagatgggcatggatgcaaaccgaggtacaaaggataagcaccga 27626517  T
Q  201 gcaa 204  Q
    ||||    
T  27626518 gcaa 27626521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 24170064 - 24170261
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||| ||| |||||| | |||||| ||||||||||||||||| | |||||||||||||||||||||||||||||| || |    
T  24170064 cttcctaacccatctcggactaacaccgaggtggaagcaaattttttgtatgttggtgatggttcacaggtacatgaagagcataatcaaggtgaggagg 24170163  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    |||||||| || ||||| |||| |||| || || ||||||       ||||||| ||||||| | |||||||||||||||||||||||||| ||||| ||    
T  24170164 aaggtgcaaacttgcacaatgaggaggcgcaccatgacca------aaacaatggaagatggtcatggatgcaaactgaggtacaaaggattagcactga 24170257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 25372466 - 25372320
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||| ||| |||||| ||||||||| | ||||||||||| || | |||||||||||||||||| |||   || || || |    
T  25372466 cttcctaacccatctcggactaacaccgaggtggaagaaaatttgatatatgttggtgaaggttcacaggtacatgaagagcacaatgttggagaagagg 25372367  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgcc 147  Q
    ||||||||||| |||||||||| |||||||  | ||||||| |||||    
T  25372366 aaggtgcacacttgcaccatgatgaggagcaacatgaccatgatgcc 25372320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 24821613 - 24821486
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||    | ||||||||||||| ||  || | |  | ||| |    
T  24821613 cttcctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttgttgatgatccataggtacatgaagaacacgatgatgaaggcgagg 24821514  T
Q  101 aaggtgcacacatgcaccatgaagagga 128  Q
    ||||||||||| ||||||| ||||||||    
T  24821513 aaggtgcacacttgcaccaagaagagga 24821486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 17867545 - 17867467
Alignment:
Q  5 ctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagca 83  Q
    |||||||||||||||||||| ||| |||||| |||||||||||||||||||||||| | |  || ||||||||||||||    
T  17867545 ctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttggtgatagttcgcaagtacatgaagagca 17867467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 25146133 - 25146078
Alignment:
Q  149 acaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccgagcaa 204  Q
    |||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||    
T  25146133 acaatgaaagatgggcatggatgcaaaatgaggtacaaaggattagcaccgagcaa 25146078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 25369075 - 25369016
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgat 60  Q
    |||||||||||||||||||||||| ||| |||||| || |||||||||||||||||||||    
T  25369075 cttcctaacccatctcggactaacaccgaggtggaagacaatttgttgtatgttggtgat 25369016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 25368961 - 25368908
Alignment:
Q  151 aatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccgagcaa 204  Q
    |||||||||||||| ||||||||||||||||| || ||||||||||||||||||    
T  25368961 aatgaaagatgggcatggatgcaaactgaggttcagaggataagcaccgagcaa 25368908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 23160901 - 23160851
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgtt 54  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||||||||||    
T  23160901 cctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgtt 23160851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 23572158 - 23572108
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgtt 54  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||||||||||    
T  23572158 cctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgtt 23572108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 27630195 - 27630245
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgtt 54  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||||||||||    
T  27630195 cctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgtt 27630245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 116220 - 116270
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgtt 54  Q
    |||||| |||||||||||||| ||| |||||| ||||||||||||||||||    
T  116220 cctaactcatctcggactaacaccgaggtggaagaaaatttgttgtatgtt 116270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 16774345 - 16774402
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatg 61  Q
    |||||||||||||| |||||| ||| |||||| | ||||||||||||||||| |||||    
T  16774345 cctaacccatctcgaactaacaccgaggtggaagcaaatttgttgtatgttgatgatg 16774402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 24796821 - 24796764
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatg 61  Q
    |||||||||||||| |||||| ||| |||||| | ||||||||||||||||| |||||    
T  24796821 cctaacccatctcgaactaacaccgaggtggaagcaaatttgttgtatgttgatgatg 24796764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 26192962 - 26192912
Alignment:
Q  151 aatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccgag 201  Q
    |||||||||||| | ||||||||||| |||||  |||||||||||||||||    
T  26192962 aatgaaagatggacatggatgcaaaccgaggttgaaaggataagcaccgag 26192912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 17867390 - 17867337
Alignment:
Q  151 aatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccgagcaa 204  Q
    |||||||||||| | ||||||| ||| |||||  ||||||||||||||||||||    
T  17867390 aatgaaagatggacatggatgcgaaccgaggttgaaaggataagcaccgagcaa 17867337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 176; Significance: 5e-95; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 22101115 - 22100912
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22101115 cttcctaacccatctcggactaaccccgaggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 22101016  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    ||||||||||||||||||||||||||||||||  ||||||||| ||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  22101015 aaggtgcacacatgcaccatgaagaggagccctatgaccataacgccgacaatgaaagatgggcatggatgcaaaccgaggtacaaaggataagcaccga 22100916  T
Q  201 gcaa 204  Q
    ||||    
T  22100915 gcaa 22100912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 21380817 - 21381020
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21380817 cttcctaacccttctcggactaaccccgaggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 21380916  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    ||||||||||||||||||||||||||||||||| | ||||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  21380917 aaggtgcacacatgcaccatgaagaggagccccataaccataacgacaacaatgaaagatgggcatggatgcaaaccgaggtacaaaggataagcaccga 21381016  T
Q  201 gcaa 204  Q
    ||||    
T  21381017 gcaa 21381020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 8313192 - 8313395
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8313192 cttcctaacccatctcggactaaccccgaggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 8313291  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    ||||||| ||||||||||||||||| ||||||| ||||||||| | | |||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  8313292 aaggtgcccacatgcaccatgaagaagagccccatgaccataacgactacaatgaaagatgggcatggatgcaaaccgaggtacaaaggataagcaccga 8313391  T
Q  201 gcaa 204  Q
    ||||    
T  8313392 gcaa 8313395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 164; E-Value: 7e-88
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 8324341 - 8324138
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8324341 cttcctaacccatctcggactaaccccgaggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 8324242  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    ||||||| || ||||||||||| || ||||||| ||||||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  8324241 aaggtgcccagatgcaccatgaggaagagccccatgaccataacgacaacaatgaaagatgggcatggatgcaaaccgaggtacaaaggataagcaccga 8324142  T
Q  201 gcaa 204  Q
    ||||    
T  8324141 gcaa 8324138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 164; E-Value: 7e-88
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 22035020 - 22034817
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22035020 cttcctaacccatctcgtactaaccccgaggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 22034921  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    ||||||||||||||||||||||||||||||||| |||||||||  || |||||||||||| ||| ||||||||||| ||||||||||| |||||||||||    
T  22034920 aaggtgcacacatgcaccatgaagaggagccccatgaccataacaccgacaatgaaagattggcatggatgcaaaccgaggtacaaagaataagcaccga 22034821  T
Q  201 gcaa 204  Q
    ||||    
T  22034820 gcaa 22034817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 156; E-Value: 4e-83
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 22097947 - 22098150
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22097947 cttcctaacccatctcggactaaccccgaggtggaggagaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 22098046  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    | |||||||||||||||||||||||||| |||| ||||||||| | | |||||||||||||||| ||||||||||  |||||||||||||||||||| ||    
T  22098047 acggtgcacacatgcaccatgaagaggaaccccatgaccataacgacgacaatgaaagatgggcatggatgcaaatcgaggtacaaaggataagcactga 22098146  T
Q  201 gcaa 204  Q
    ||||    
T  22098147 gcaa 22098150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 16420090 - 16419891
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    ||||||||||||||| |||||||| ||| ||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  16420090 cttcctaacccatcttggactaacaccgaggtggaggcgaatttgttgtatgttggtgatggattacacgtacatgaagagcataatcaaggtgaagaag 16419991  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    | |||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16419990 acggtgcaaacatgcaccataaagaggagccccatgaccataatgccaacaatgaaagatgggcatggatgcaaactgaggtacaaaggataagcaccga 16419891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 21954803 - 21955006
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21954803 cttcctaacccatctcggactaaccccgaggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 21954902  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    ||||||||||||| ||||| |||||||| |||| ||||| ||| | |  ||||||||||||||| ||||| ||||| |||||||||||||||||||||||    
T  21954903 aaggtgcacacatacaccacgaagaggaaccccatgaccctaacgacgtcaatgaaagatgggcatggatccaaaccgaggtacaaaggataagcaccga 21955002  T
Q  201 gcaa 204  Q
    ||||    
T  21955003 gcaa 21955006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 22830614 - 22830760
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||  ||| |||||| |||||||||||||||||||||||||| | |||||||||||||||||| |||   || || || |    
T  22830614 cttcctaacccatctcggactaataccgaggtggaagaaaatttgttgtatgttggtgatggttcacaggtacatgaagagcacaatgctggagaagagg 22830713  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgcc 147  Q
    ||||||||||| |||||||||| ||||||| || |||| || |||||    
T  22830714 aaggtgcacacttgcaccatgatgaggagcaccatgactatgatgcc 22830760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 21942956 - 21942816
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |  ||||||||||||||||| | |   || || || |    
T  21942956 cttcctaacccatctcggactaacaccgaggtggaggaaaatttgttgtatgttggtgatggttcgcaggtacatgaagagcacattattggagaagagg 21942857  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccat 141  Q
    ||||||||||| ||||||| || ||||||| || |||||||    
T  21942856 aaggtgcacacttgcaccaagaggaggagcaccatgaccat 21942816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 21100339 - 21100218
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||    |||||||||||||||||||||||||||||| |  |    
T  21100339 cttcctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttgatgatgacccacaggtacatgaagagcataatcaaggtgaagcgg 21100240  T
Q  101 aaggtgcacacatgcaccatga 122  Q
    | | ||||||| ||||||||||    
T  21100239 atgatgcacacttgcaccatga 21100218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 22289752 - 22289873
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    ||||||| | |||||||||||||| ||| |||||| |||||||||||||||||||||||||| | |||||||||||||||||| |||   || || || |    
T  22289752 cttcctatctcatctcggactaacaccgaggtggaagaaaatttgttgtatgttggtgatggttcacaggtacatgaagagcacaatgctggagaagagg 22289851  T
Q  101 aaggtgcacacatgcaccatga 122  Q
    ||||||||||| ||||||||||    
T  22289852 aaggtgcacacttgcaccatga 22289873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 17132523 - 17132585
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatgga 63  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17132523 cttcctaacccatctcggactaaccccgaggtggaggaaaatttgttgtatgttggtgatgga 17132585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 11348447 - 11348365
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagca 83  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||| | |  |||||||||||||||||    
T  11348447 cttcctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttggtgatagttcgcaggtacatgaagagca 11348365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 22368672 - 22368754
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagca 83  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||| | |  |||||||||||||||||    
T  22368672 cttcctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttggtgatagttcgcaggtacatgaagagca 22368754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 19766186 - 19766261
Alignment:
Q  5 ctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaaga 80  Q
    |||||||||||| ||||||| ||| |||||| ||||||||||||||||||| |||||    |||||||||||||||    
T  19766186 ctaacccatctcagactaacaccgaggtggaagaaaatttgttgtatgttgttgatgatccacaggtacatgaaga 19766261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 4 - 141
Target Start/End: Original strand, 21826100 - 21826237
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggt--acat-gaagagcataatcaaggtgacgaag 100  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||||||||||  |||||    ||||||  |||| ||| |||||||| ||   || || |    
T  21826100 cctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttaatgatgacccacaggtgcacatagaacagcataatgaa---gaagagg 21826196  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccat 141  Q
    |||||||||| ||||||||||| ||||||| || |||||||    
T  21826197 aaggtgcacaaatgcaccatgatgaggagcaccatgaccat 21826237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 29333300 - 29333356
Alignment:
Q  5 ctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatg 61  Q
    ||||||||||||| |||||| ||| |||||| ||||||||||||||||||| |||||    
T  29333300 ctaacccatctcgaactaacaccgaggtggaagaaaatttgttgtatgttgttgatg 29333356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 204
Target Start/End: Complemental strand, 11348288 - 11348235
Alignment:
Q  151 aatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccgagcaa 204  Q
    |||||||||||| | ||||||||||| |||||  ||||||||||||||||||||    
T  11348288 aatgaaagatggacatggatgcaaaccgaggttgaaaggataagcaccgagcaa 11348235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 204
Target Start/End: Original strand, 22289899 - 22289952
Alignment:
Q  151 aatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccgagcaa 204  Q
    |||||||||||||| || ||||||||||||||  | ||||||||||||||||||    
T  22289899 aatgaaagatgggcatgaatgcaaactgaggttgagaggataagcaccgagcaa 22289952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 204
Target Start/End: Complemental strand, 21100156 - 21100100
Alignment:
Q  148 aacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccgagcaa 204  Q
    ||||||||||||||||| ||||| || | ||||||| | ||||||| ||||||||||    
T  21100156 aacaatgaaagatgggcatggatacacaatgaggtagagaggataaacaccgagcaa 21100100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 172; Significance: 1e-92; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 22109684 - 22109887
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22109684 cttcctaacccatctcggactaaccccgaggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 22109783  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    ||||||| ||||||||||||||||| ||||||| ||||||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  22109784 aaggtgcccacatgcaccatgaagaagagccccatgaccataacgacaacaatgaaagatgggcatggatgcaaaccgaggtacaaaggataagcaccga 22109883  T
Q  201 gcaa 204  Q
    ||||    
T  22109884 gcaa 22109887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 15253069 - 15253273
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15253069 cttcctaatccatctcggactaaccccgaggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 15253168  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactg-aggtacaaaggataagcaccg 199  Q
    ||||||||||||||| ||||||||||||||||| |||||||||  || |||||||||||| ||| ||||||||||| | |||||||||||||||||||||    
T  15253169 aaggtgcacacatgctccatgaagaggagccccatgaccataacaccgacaatgaaagattggcatggatgcaaaccgcaggtacaaaggataagcaccg 15253268  T
Q  200 agcaa 204  Q
    |||||    
T  15253269 agcaa 15253273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3353304 - 3353364
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatg 61  Q
    ||||||||||||||||| |||||| ||| |||||| ||||||||||||||||||| |||||    
T  3353304 cttcctaacccatctcgaactaacaccgaggtggaagaaaatttgttgtatgttgttgatg 3353364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 4 - 141
Target Start/End: Complemental strand, 15261585 - 15261448
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggt--acat-gaagagcataatcaaggtgacgaag 100  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||||||||||  |||||    ||||||  |||| ||| |||||||| ||   || || |    
T  15261585 cctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttaatgatgacccacaggtgcacatagaacagcataatgaa---gaagagg 15261489  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccat 141  Q
    |||||||||| ||||||||||| ||||||| || |||||||    
T  15261488 aaggtgcacaaatgcaccatgatgaggagcaccatgaccat 15261448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 15864217 - 15864362
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||| ||| |||||| |||| ||| |||||||||  |||||    |||||| ||||||||||  | |   || || || |    
T  15864217 cttcctaacccatctcggactaacaccgaggtggaagaaatttttttgtatgttattgatgatccacaggtgcatgaagagcccattgtgggagaagagg 15864316  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgc 146  Q
    ||||||||||  |||||||||| ||||||| || ||||||| ||||    
T  15864317 aaggtgcacatttgcaccatgatgaggagcaccatgaccatgatgc 15864362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 13821597 - 13821654
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatg 61  Q
    |||||||||||||| |||||| ||| |||||| | ||||||||||||||||| |||||    
T  13821597 cctaacccatctcgaactaacaccgaggtggaagcaaatttgttgtatgttgatgatg 13821654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 12762 - 12965
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12762 cttcctaacccatctcggactaaccccgaggtggaggaaaattagttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgaagaag 12861  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||| |||||| ||||||||| ||||||||||| |||||||||||||||||||||||    
T  12862 aaggtgcacacatgcaccatgaagaggagccccatgaccataacgccgacaatgtaagatgggcatggatgcaaaccgaggtacaaaggataagcaccga 12961  T
Q  201 gcaa 204  Q
    ||||    
T  12962 gcaa 12965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 168; Significance: 3e-90; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 20236205 - 20236408
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20236205 cttcctaacccatctcggactaaccccaaggtggagaaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 20236304  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    |||||||||||||||||||||||||||| |||| ||||||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||    
T  20236305 aaggtgcacacatgcaccatgaagaggaaccccatgaccataatgacaacaataaaagatgggcatggatgcaaaccgaggtacaaaggataagcaccga 20236404  T
Q  201 gcaa 204  Q
    ||||    
T  20236405 gcaa 20236408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 5 - 204
Target Start/End: Complemental strand, 19877172 - 19876961
Alignment:
Q  5 ctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaagaagg 104  Q
    |||||| ||||||||||||| ||| |||||| ||||| |||||||||||||||||||    |||||||||||| ||||| |||  |||||| ||||||||    
T  19877172 ctaacctatctcggactaacaccgaggtggaagaaaacttgttgtatgttggtgatgatccacaggtacatgaggagcaaaatgcaggtgaggaagaagg 19877073  T
Q  105 tgcacacatgcaccatgaagaggagccccgtgaccataatgcc------aac------aatgaaagatgggcttggatgcaaactgaggtacaaaggata 192  Q
    |||| || |||||||||| ||||||| || ||||||| |  ||      |||      |||||||||||||| ||||||||||||||||| |||||||||    
T  19877072 tgcaaacttgcaccatgatgaggagcaccatgaccatgacaccggaggaaactttgcaaatgaaagatgggcatggatgcaaactgaggtccaaaggata 19876973  T
Q  193 agcaccgagcaa 204  Q
    ||||||||||||    
T  19876972 agcaccgagcaa 19876961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 8651737 - 8651856
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||| ||||||||||||| | | |||||| |||||||||||||||||||||||||| | ||| |||||||||||||| |||    | || || |    
T  8651737 cttcctaacctatctcggactaacactgaggtggaagaaaatttgttgtatgttggtgatggttcacaagtacatgaagagcacaatgttagagaagagg 8651836  T
Q  101 aaggtgcacacatgcaccat 120  Q
    ||||||||||| ||||||||    
T  8651837 aaggtgcacacttgcaccat 8651856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 20072434 - 20072316
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||| ||| |||||| |||||||| |||||||||| |||||    ||| |||||| ||||| ||||||||||||| |  |    
T  20072434 cttcctaacccatctcggactaacaccgaggtggaagaaaattttttgtatgttgatgatgacccacaagtacataaagagtataatcaaggtgaagcgg 20072335  T
Q  101 aaggtgcacacatgcacca 119  Q
    | |||||||| ||||||||    
T  20072334 atggtgcacaaatgcacca 20072316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 8948943 - 8948863
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagag 81  Q
    |||||||||||||||||||||||| ||| ||| || |||||||||||||||||||||||||| |  || ||||||||||||    
T  8948943 cttcctaacccatctcggactaacaccgaggttgaagaaaatttgttgtatgttggtgatggttcgcaagtacatgaagag 8948863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 20392180 - 20392230
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgtt 54  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||||||||||    
T  20392180 cctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgtt 20392230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 21800200 - 21800143
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatg 61  Q
    |||||||||||||| |||||| ||| |||||| | ||||||||||||||||| |||||    
T  21800200 cctaacccatctcgaactaacaccgaggtggaagcaaatttgttgtatgttgctgatg 21800143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 3988798 - 3988854
Alignment:
Q  5 ctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatg 61  Q
    |||||||||||||||||||| ||  |||||| |||||| |||||||||||| |||||    
T  3988798 ctaacccatctcggactaacaccaaggtggaagaaaatatgttgtatgttgttgatg 3988854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 19783722 - 19783845
Alignment:
Q  5 ctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaagaagg 104  Q
    |||||| ||||| ||||||| ||| |||||| ||||||||||||||||||  |||||    |||||| |||| ||| ||  || | |  ||||| |||||    
T  19783722 ctaacctatctctgactaacaccgaggtggaagaaaatttgttgtatgttaatgatgacccacaggtgcatgtagaacacgataatgaagacgaggaagg 19783821  T
Q  105 tgcacacatgcaccatgaagagga 128  Q
    ||||||| ||||||| ||||||||    
T  19783822 tgcacacttgcaccaagaagagga 19783845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 151 - 204
Target Start/End: Original strand, 8651899 - 8651952
Alignment:
Q  151 aatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccgagcaa 204  Q
    |||||||||||||| |||||||| || |||||  ||| ||||||||||||||||    
T  8651899 aatgaaagatgggcatggatgcacaccgaggttgaaatgataagcaccgagcaa 8651952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1571 (Bit Score: 164; Significance: 7e-88; HSPs: 1)
Name: scaffold1571
Description:

Target: scaffold1571; HSP #1
Raw Score: 164; E-Value: 7e-88
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 1346 - 1549
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  1346 cttcctaacccatctcggactaaccccgaggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagaacataatcaaggtgacgaag 1445  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    | ||||| ||||||||||||||||| ||||||| ||||||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  1446 agggtgcccacatgcaccatgaagaagagccccatgaccataacgacaacaatgaaagatgggcatggatgcaaaccgaggtacaaaggataagcaccga 1545  T
Q  201 gcaa 204  Q
    ||||    
T  1546 gcaa 1549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 164; Significance: 7e-88; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 164; E-Value: 7e-88
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 24856734 - 24856531
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24856734 cttcctaacccatctcggactaaccccgaggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgaagaag 24856635  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    ||||||| |||||||||||||| || ||||||| ||||||||| | |||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  24856634 aaggtgcccacatgcaccatgacgaagagccccatgaccataacgacaacaatgaaagatgggcatggatgcaaaccgaggtacaaaggataagcaccga 24856535  T
Q  201 gcaa 204  Q
    ||||    
T  24856534 gcaa 24856531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 8725491 - 8725349
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |    
T  8725491 cttcctaacccatctcggactaaccccgaggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgaagacg 8725392  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataa 143  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  8725391 aaggtgcacacatgcaccatgaagaggagccccatgaccataa 8725349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 18010572 - 18010773
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggatt----acaggtacatgaagagcataatcaaggtgac 96  Q
    |||||||||||||||||||||||| ||  |||||| ||||||||||||||||||||||||||       ||||||||| ||||||||| ||||||||||     
T  18010572 cttcctaacccatctcggactaacaccaaggtggaagaaaatttgttgtatgttggtgatggtccgtccacaggtacaggaagagcattatcaaggtgag 18010671  T
Q  97 gaagaaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagca 196  Q
    | || |||| ||||| ||||| |||| ||  ||| |    ||||| |   | |||||||||||||||| |||||||||| ||||||||||||||||||||    
T  18010672 gcaggaggtacacacttgcacaatgagga--agcac----accatgaaaaccacaatgaaagatgggcatggatgcaaaatgaggtacaaaggataagca 18010765  T
Q  197 ccgagcaa 204  Q
    ||||||||    
T  18010766 ccgagcaa 18010773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 18446920 - 18447060
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    ||||||||||||||||| |||||| ||| |||||| |||||||||||||||||||||||||| |  ||||||||||||||||| | |   || || || |    
T  18446920 cttcctaacccatctcgaactaacaccgaggtggaagaaaatttgttgtatgttggtgatggttcgcaggtacatgaagagcacattattggagaagagg 18447019  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccat 141  Q
    ||||||||||| ||||||| || ||||||| || |||||||    
T  18447020 aaggtgcacacttgcaccaagaggaggagcaccatgaccat 18447060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21561979 - 21561926
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgtt 54  Q
    ||||||||||||| |||||||||| ||| |||||| ||||||||||||||||||    
T  21561979 cttcctaacccatttcggactaacaccgaggtggaagaaaatttgttgtatgtt 21561926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 20017766 - 20017709
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatg 61  Q
    |||||||||||||| |||||| ||| |||||| | ||||||||||||||||| |||||    
T  20017766 cctaacccatctcgaactaacaccgaggtggaagcaaatttgttgtatgttgatgatg 20017709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 22167081 - 22167024
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatg 61  Q
    |||||||||||||| |||||| ||| |||||| | ||||||||||||||||| |||||    
T  22167081 cctaacccatctcgaactaacaccgaggtggaagcaaatttgttgtatgttgatgatg 22167024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 22768656 - 22768605
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttg 55  Q
    |||||||||||||| |||||| ||| |||||| | |||||||||||||||||    
T  22768656 cctaacccatctcgaactaacaccgaggtggaagcaaatttgttgtatgttg 22768605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 151 - 204
Target Start/End: Original strand, 18447082 - 18447135
Alignment:
Q  151 aatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccgagcaa 204  Q
    |||||||||||| | ||||| ||||| |||||  ||||||||||||||||||||    
T  18447082 aatgaaagatggacatggatacaaaccgaggttgaaaggataagcaccgagcaa 18447135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 151 - 204
Target Start/End: Original strand, 25966518 - 25966571
Alignment:
Q  151 aatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccgagcaa 204  Q
    ||||||||||| || |||||||||||||| ||  | ||||||||||||||||||    
T  25966518 aatgaaagatgagcatggatgcaaactgaagttgagaggataagcaccgagcaa 25966571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 140; Significance: 2e-73; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 115371 - 115574
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    ||||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |    
T  115371 cttcctaacccatctcggattaacaccgaggtggaggcaaatttgttgtatgttggtgatggatcacaggtacatgaagagcataatcaaggtgaagagg 115470  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    ||||| || ||||||||||||||||| |||||| ||||||||||||| ||||||||||||| || ||||||||||| |||| ||||||||||||||||||    
T  115471 aaggtacaaacatgcaccatgaagagaagccccatgaccataatgccgacaatgaaagatgagcatggatgcaaaccgaggaacaaaggataagcaccga 115570  T
Q  201 gcaa 204  Q
    ||||    
T  115571 gcaa 115574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 119675 - 119878
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    ||||||||||||||||||| |||| ||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |    
T  119675 cttcctaacccatctcggattaacaccgaggtggaggcaaatttgttgtatgttggtgatggatcacaggtacatgaagagcataatcaaggtgaagagg 119774  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    ||||| || ||||||||||||||||| |||||| ||||||||||||| ||||||||||||| || ||||||||||| |||| ||||||||||||||||||    
T  119775 aaggtacaaacatgcaccatgaagagaagccccatgaccataatgccgacaatgaaagatgagcatggatgcaaaccgaggaacaaaggataagcaccga 119874  T
Q  201 gcaa 204  Q
    ||||    
T  119875 gcaa 119878  T

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Target: scaffold0216 (Bit Score: 128; Significance: 2e-66; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 10141 - 10344
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||| ||||||||||||||||| | | |||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | || |    
T  10141 cttcctgacccatctcggactaacactgaggtggaagcaaatttgttgtatgttggtgatggatcacaggtacatgaagagcataatcaaggtaaggagg 10240  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    |||||||| || |||||| ||||||||||| || ||||||||||||| | |||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  10241 aaggtgcaaacgtgcaccgtgaagaggagcaccatgaccataatgccgaaaatgaaagatgggcatggatgcaaaccgaggtacaaaggataagcaccga 10340  T
Q  201 gcaa 204  Q
    ||||    
T  10341 gcaa 10344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 5 - 200
Target Start/End: Original strand, 11257 - 11452
Alignment:
Q  5 ctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaagaagg 104  Q
    |||||||||||||||||||| ||| |||||| |  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || || ||    
T  11257 ctaacccatctcggactaacaccgaggtggaagcgaatttgttgtatgttggtgatggatcacaggtacatgaagagcataatcaaggtgaggaggacgg 11356  T
Q  105 tgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    ||||||| ||||||||||||||||||  | ||||||| ||||| | |||| ||||||||| ||||||||||| |||||||||||||||||||||||    
T  11357 tgcacacttgcaccatgaagaggagcatcatgaccatgatgccgaaaatgcaagatgggcatggatgcaaaccgaggtacaaaggataagcaccga 11452  T

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Target: scaffold0402 (Bit Score: 82; Significance: 6e-39; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 6598 - 6813
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||| | |||||||||||||| ||| |||   || || || |    
T  6598 cttcctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttggtgatggttcacaggtacatgaagtgcacaatgctggagaagagg 6697  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgcc------aac------aatgaaagatgggcttggatgcaaactgaggtacaaag 188  Q
    ||||||||||| |||||||||| ||||||| || ||||||| |||||      |||      |||||||||| ||| |||||| |||||||||||||||     
T  6698 aaggtgcacacttgcaccatgatgaggagcaccatgaccatgatgccggaggaaactttgaaaatgaaagatcggcatggatgtaaactgaggtacaaat 6797  T
Q  189 gataagcaccgagcaa 204  Q
    ||||||||||||||||    
T  6798 gataagcaccgagcaa 6813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1620 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold1620
Description:

Target: scaffold1620; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 479 - 282
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||| | | |||||| | ||||||||||||||||||| |||| |  ||| |||| |||||||||||||||||||| |  |    
T  479 cttcctaacccatctcggactaacacggaggtggaagcaaatttgttgtatgttggtaatggttcgcagatacaagaagagcataatcaaggtgaggcgg 380  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    |||||||| || ||||| |||| || |  | || ||||||      | |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  379 aaggtgcaaacttgcacaatgaggaagcacaccatgacca------cgacaatgaaagatgggcatggatgcaaactgaggtacaaaggataagcaccga 286  T

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Target: scaffold1879 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold1879
Description:

Target: scaffold1879; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 406 - 209
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||   ||||||||| ||||||||| |||||||||  | ||    
T  406 cttcctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttggtgatggtccacaggtacaggaagagcattatcaaggtggggcag 307  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
     |||||||||| ||||| ||||  |  ||| |    ||||| |     |||||||||||||||| |||||||||| ||||||||||||||| ||||||||    
T  306 gaggtgcacacttgcacaatgagaa--agcac----accatgaaaaacacaatgaaagatgggcatggatgcaaaatgaggtacaaaggattagcaccga 213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 66; Significance: 2e-29; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 8511 - 8390
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||    |||||||||||||||||||||||||||||| |  |    
T  8511 cttcctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttgatgatgacccacaggtacatgaagagcataatcaaggtgaagcgg 8412  T
Q  101 aaggtgcacacatgcaccatga 122  Q
    | | ||||||| ||||||||||    
T  8411 atgatgcacacttgcaccatga 8390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 65; Significance: 9e-29; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 32968 - 32864
Alignment:
Q  100 gaaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccg 199  Q
    ||||||||| || ||||||||||||||| || || ||||||| ||||  | |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32968 gaaggtgcaaacttgcaccatgaagaggggcaccatgaccatgatgctgaaaatgaaagatgggcatggatgcaaactgaggtacaaaggataagcaccg 32869  T
Q  200 agcaa 204  Q
    |||||    
T  32868 agcaa 32864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 33043 - 32965
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaag 79  Q
    ||||||||||||||||| |||||| ||| |||||| | |||||||||||||||||||||||| | |||| |||||||||    
T  33043 cttcctaacccatctcgcactaacaccgaggtggaagcaaatttgttgtatgttggtgatggttcacagctacatgaag 32965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 39224 - 39027
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    ||||||||||||||| |||||||| ||| |||||| | ||||||||||||||||||||||||   | ||||| ||||||||||| |||||||||| |  |    
T  39224 cttcctaacccatcttggactaacaccgaggtggaagcaaatttgttgtatgttggtgatggtccataggtatatgaagagcattatcaaggtgaggttg 39125  T
Q  101 aaggtgcacacatgcaccatgaagaggagccccgtgaccataatgccaacaatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
     ||||||| |  || |  |||| || | ||      ||||| ||  | |||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  39124 gaggtgcatatttgtataatgaggaagcgc------accatgattaccacaatgaaagatgggcatggatgcaaactgaggtacaaaggattagcaccga 39031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 59; Significance: 3e-25; HSPs: 2)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 21631 - 21757
Alignment:
Q  2 ttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaaga 101  Q
    |||||||||||||||||| |||| ||| |||||| |||||||||||||||||||||||||    |||||| ||||| ||||| |||| |||||| || ||    
T  21631 ttcctaacccatctcggaataacaccgaggtggaagaaaatttgttgtatgttggtgatgttccacaggttcatgaggagcacaatctaggtgaggagga 21730  T
Q  102 aggtgcacacatgcaccatgaagagga 128  Q
    ||||||| || |||||||||| |||||    
T  21731 aggtgcaaacttgcaccatgatgagga 21757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 200
Target Start/End: Original strand, 21792 - 21841
Alignment:
Q  151 aatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccga 200  Q
    |||||||||||||| ||||||||||| ||||| || ||||||||||||||    
T  21792 aatgaaagatgggcatggatgcaaacggaggttcagaggataagcaccga 21841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 59; Significance: 3e-25; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 10859 - 10941
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagca 83  Q
    ||||||||||||||||||||||||  || |||||| |||||||||||||||||||||||||| | ||||||||||||||||||    
T  10859 cttcctaacccatctcggactaacaacgaggtggaagaaaatttgttgtatgttggtgatggttcacaggtacatgaagagca 10941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 18860 - 18942
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagca 83  Q
    ||||||||||||||||||||||||  || |||||| |||||||||||||||||||||||||| | ||||||||||||||||||    
T  18860 cttcctaacccatctcggactaacaacgaggtggaagaaaatttgttgtatgttggtgatggttcacaggtacatgaagagca 18942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 59; Significance: 3e-25; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 44146 - 44228
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagca 83  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||| |  |||||||||||||||||    
T  44146 cttcctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttggtgatggttcgcaggtacatgaagagca 44228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 51535 - 51617
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagca 83  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||| |  |||||||||||||||||    
T  51535 cttcctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttggtgatggttcgcaggtacatgaagagca 51617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 234539 - 234457
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagca 83  Q
    ||||||||||||||||||||||||  || |||||| |||||||||||||||||||||||||| | ||||||||||||||||||    
T  234539 cttcctaacccatctcggactaacaacgaggtggaagaaaatttgttgtatgttggtgatggttcacaggtacatgaagagca 234457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1095 (Bit Score: 57; Significance: 5e-24; HSPs: 2)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 1988 - 2072
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcata 85  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||||  |  |||||||||||||||||||    
T  1988 cttcctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttggtgatgattcgcaggtacatgaagagcata 2072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1095; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 2153 - 2203
Alignment:
Q  154 gaaagatgggcttggatgcaaactgaggtacaaaggataagcaccgagcaa 204  Q
    ||||||||| | ||||||||||| |||||  ||||||||||||||||||||    
T  2153 gaaagatggacatggatgcaaaccgaggttgaaaggataagcaccgagcaa 2203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 54965 - 55080
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    ||||||||||||||||||| |||| ||| |||||| | ||||||||||||||||||||||||   ||||||| | ||||||||| |||||||||| | ||    
T  54965 cttcctaacccatctcggattaacaccgaggtggaagcaaatttgttgtatgttggtgatggtccacaggtataggaagagcattatcaaggtgaggcag 55064  T
Q  101 aaggtgcacacatgca 116  Q
     |||||||||| ||||    
T  55065 gaggtgcacacttgca 55080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 55; Significance: 8e-23; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 132342 - 132424
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagca 83  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||| | |  |||||||||||||||||    
T  132342 cttcctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttggtgatagttcgcaggtacatgaagagca 132424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 204
Target Start/End: Original strand, 132501 - 132554
Alignment:
Q  151 aatgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccgagcaa 204  Q
    |||||||||||| | ||||||||||| |||||  ||||||||||||||||||||    
T  132501 aatgaaagatggacatggatgcaaaccgaggttgaaaggataagcaccgagcaa 132554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 253298 - 253240
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtga 59  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||    
T  253298 cttcctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttggtga 253240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19477 - 19417
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatg 61  Q
    |||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||    
T  19477 cttcctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttgatgatg 19417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 3570 - 3443
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaag 100  Q
    |||||||||||||||||||||||| ||| |||||| ||||||||||||||||||  |||||    |||||| |||| ||| ||  || | |  ||||| |    
T  3570 cttcctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttaatgatgacccacaggtgcatgtagaacacgataatgaagacgagg 3471  T
Q  101 aaggtgcacacatgcaccatgaagagga 128  Q
    ||||||||||| ||||||| ||||||||    
T  3470 aaggtgcacacttgcaccaagaagagga 3443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 24047 - 24122
Alignment:
Q  5 ctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaaga 80  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||    |||||||||||||||    
T  24047 ctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttgttgatgatccacaggtacatgaaga 24122  T

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Target: scaffold0142 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 80
Target Start/End: Complemental strand, 22518 - 22443
Alignment:
Q  5 ctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaaga 80  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||    |||||||||||||||    
T  22518 ctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttgttgatgatccacaggtacatgaaga 22443  T

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Target: scaffold0029 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 122069 - 122144
Alignment:
Q  5 ctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaaga 80  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||    |||||||||||||||    
T  122069 ctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttgttgatgatccacaggtacatgaaga 122144  T

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Target: scaffold0018 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 128
Target Start/End: Complemental strand, 19775 - 19652
Alignment:
Q  5 ctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaagaagg 104  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||    | ||||||||||||| ||  || | |  | ||| |||||    
T  19775 ctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttgttgatgatccataggtacatgaagaacacgatgatgaaggcgaggaagg 19676  T
Q  105 tgcacacatgcaccatgaagagga 128  Q
    ||||||| ||||||| ||||||||    
T  19675 tgcacacttgcaccaagaagagga 19652  T

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Target: scaffold0974 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0974
Description:

Target: scaffold0974; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 1 - 51
Alignment:
Q  154 gaaagatgggcttggatgcaaactgaggtacaaaggataagcaccgagcaa 204  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  1 gaaagatgggcatggatacaaactgaggtacaaaggataagcaccgagcaa 51  T

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Target: scaffold0525 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 856 - 997
Alignment:
Q  5 ctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatggattacaggtacatgaagagcataatcaaggtgacgaagaagg 104  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||    ||||||||||| ||| ||  || | |  || || |||||    
T  856 ctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttgttgatgatccacaggtacatg-agaacacgatgatgaagaagaggaagg 954  T
Q  105 tgcacacatgcaccatgaagaggagccccgtgaccataatgcc 147  Q
    ||||||  |||||||||| ||||||| || ||||||| |||||    
T  955 tgcacaattgcaccatgatgaggagcaccatgaccatgatgcc 997  T

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Target: scaffold0346 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 5093 - 5035
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtga 59  Q
    |||||||||||||||||||||||| ||| |||||| || ||||||||||||||||||||    
T  5093 cttcctaacccatctcggactaacaccgaggtggaagagaatttgttgtatgttggtga 5035  T

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Target: scaffold0346; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 4930 - 4878
Alignment:
Q  152 atgaaagatgggcttggatgcaaactgaggtacaaaggataagcaccgagcaa 204  Q
    ||||||||||| | ||||||||||| |||||  ||||||||||||||||||||    
T  4930 atgaaagatggacatggatgcaaaccgaggttgaaaggataagcaccgagcaa 4878  T

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Target: scaffold0156 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 7996 - 7938
Alignment:
Q  1 cttcctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtga 59  Q
    |||||||||||||||||||||||| ||| | |||| |||||||||||||||||||||||    
T  7996 cttcctaacccatctcggactaacaccgagctggaagaaaatttgttgtatgttggtga 7938  T

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Target: scaffold0230 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 12170 - 12226
Alignment:
Q  5 ctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttggtgatg 61  Q
    |||||||||||||||||||| ||| |||||| ||||||||||||||||||| |||||    
T  12170 ctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgttgttgatg 12226  T

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Target: scaffold0078 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 29197 - 29247
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgtt 54  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||||||||||    
T  29197 cctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgtt 29247  T

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Target: scaffold0022 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 24258 - 24308
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgtt 54  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||||||||||    
T  24258 cctaacccatctcggactaacaccgaggtggaagaaaatttgttgtatgtt 24308  T

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Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 24449 - 24497
Alignment:
Q  156 aagatgggcttggatgcaaactgaggtacaaaggataagcaccgagcaa 204  Q
    ||||||||  |||||||| ||||||||  ||||||||||||||||||||    
T  24449 aagatgggaatggatgcatactgaggtcgaaaggataagcaccgagcaa 24497  T

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Target: scaffold0146 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 21572 - 21622
Alignment:
Q  5 ctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatgttg 55  Q
    |||||||||||||||||||| | | |||||| |||||||||||||||||||    
T  21572 ctaacccatctcggactaacactgaggtggaagaaaatttgttgtatgttg 21622  T

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Target: scaffold0051 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 25907 - 25859
Alignment:
Q  4 cctaacccatctcggactaaccccgcggtggaggaaaatttgttgtatg 52  Q
    ||||||||||||||||||||| ||| |||||| ||||||||| ||||||    
T  25907 cctaacccatctcggactaacaccgaggtggaagaaaatttgctgtatg 25859  T

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