View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8943_low_1 (Length: 779)

Name: NF8943_low_1
Description: NF8943
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8943_low_1
NF8943_low_1
[»] chr5 (18 HSPs)
chr5 (8-762)||(6268677-6269436)
chr5 (18-137)||(24835148-24835268)
chr5 (18-140)||(14343878-14344001)
chr5 (18-137)||(7314374-7314494)
chr5 (18-137)||(11723928-11724048)
chr5 (18-137)||(30607833-30607953)
chr5 (18-137)||(33433996-33434116)
chr5 (18-137)||(34455583-34455703)
chr5 (8-137)||(11766145-11766275)
chr5 (18-138)||(9403708-9403829)
chr5 (13-133)||(34870317-34870437)
chr5 (18-125)||(30422192-30422298)
chr5 (137-209)||(1975311-1975383)
chr5 (150-208)||(1974154-1974212)
chr5 (137-207)||(40008711-40008781)
chr5 (151-208)||(3458012-3458069)
chr5 (46-99)||(42748256-42748309)
chr5 (137-206)||(1145141-1145210)
[»] chr4 (20 HSPs)
chr4 (8-137)||(44432668-44432798)
chr4 (18-137)||(42533598-42533718)
chr4 (18-137)||(5274288-5274408)
chr4 (18-137)||(46692791-46692910)
chr4 (18-137)||(22047136-22047256)
chr4 (18-137)||(4839789-4839909)
chr4 (18-137)||(55326163-55326283)
chr4 (18-137)||(6639357-6639477)
chr4 (18-137)||(19248436-19248555)
chr4 (18-137)||(26069070-26069189)
chr4 (21-137)||(8894226-8894342)
chr4 (22-139)||(35417446-35417563)
chr4 (22-137)||(40996292-40996408)
chr4 (145-206)||(28796620-28796681)
chr4 (137-206)||(40450931-40451000)
chr4 (137-206)||(55523725-55523794)
chr4 (150-206)||(28798167-28798223)
chr4 (58-92)||(30219122-30219156)
chr4 (161-206)||(636617-636662)
chr4 (151-188)||(42099549-42099586)
[»] chr2 (14 HSPs)
chr2 (18-137)||(29223103-29223223)
chr2 (18-137)||(29336402-29336522)
chr2 (18-137)||(8684092-8684213)
chr2 (18-94)||(32522419-32522495)
chr2 (18-137)||(36668492-36668611)
chr2 (73-137)||(29226729-29226794)
chr2 (73-137)||(29340028-29340093)
chr2 (137-206)||(22496085-22496154)
chr2 (58-137)||(31757714-31757795)
chr2 (73-125)||(29792584-29792636)
chr2 (150-207)||(18394992-18395049)
chr2 (58-137)||(27256909-27256989)
chr2 (140-215)||(2154253-2154328)
chr2 (137-208)||(11573631-11573702)
[»] chr8 (15 HSPs)
chr8 (8-137)||(3298191-3298321)
chr8 (18-137)||(27347436-27347556)
chr8 (18-138)||(22179898-22180019)
chr8 (18-137)||(27353516-27353636)
chr8 (18-137)||(28926796-28926916)
chr8 (18-137)||(8744020-8744140)
chr8 (18-137)||(9068819-9068939)
chr8 (8-135)||(1606594-1606721)
chr8 (18-137)||(36737513-36737632)
chr8 (63-137)||(16957897-16957972)
chr8 (22-137)||(24040002-24040117)
chr8 (58-137)||(4435540-4435620)
chr8 (58-138)||(21687377-21687459)
chr8 (58-138)||(21691701-21691783)
chr8 (81-137)||(28369585-28369642)
[»] chr1 (14 HSPs)
chr1 (18-139)||(16833402-16833524)
chr1 (18-137)||(38122689-38122809)
chr1 (18-137)||(12168828-12168948)
chr1 (22-137)||(33492851-33492967)
chr1 (18-137)||(13218687-13218807)
chr1 (21-140)||(39453343-39453462)
chr1 (22-137)||(16129000-16129115)
chr1 (21-138)||(25242405-25242523)
chr1 (18-139)||(13829592-13829713)
chr1 (137-206)||(33403135-33403204)
chr1 (137-210)||(3792556-3792629)
chr1 (21-99)||(7062712-7062789)
chr1 (137-206)||(50069243-50069312)
chr1 (58-137)||(432869-432949)
[»] chr3 (17 HSPs)
chr3 (8-140)||(52308635-52308768)
chr3 (18-137)||(10407602-10407722)
chr3 (18-137)||(3587789-3587909)
chr3 (18-137)||(27031439-27031559)
chr3 (18-137)||(52045535-52045655)
chr3 (18-137)||(4755510-4755630)
chr3 (22-137)||(7653876-7653992)
chr3 (18-137)||(8614914-8615033)
chr3 (18-137)||(36470081-36470201)
chr3 (29-135)||(11263597-11263705)
chr3 (18-137)||(33247298-33247417)
chr3 (137-206)||(42381615-42381684)
chr3 (137-207)||(53827670-53827740)
chr3 (137-206)||(15042015-15042084)
chr3 (137-206)||(19866733-19866802)
chr3 (145-207)||(42994912-42994974)
chr3 (137-206)||(7666971-7667040)
[»] scaffold0019 (1 HSPs)
scaffold0019 (8-137)||(117273-117403)
[»] chr7 (18 HSPs)
chr7 (18-139)||(31158928-31159050)
chr7 (18-137)||(22322536-22322656)
chr7 (18-137)||(22817828-22817948)
chr7 (22-137)||(2630810-2630926)
chr7 (18-137)||(7143047-7143167)
chr7 (18-137)||(10346958-10347078)
chr7 (18-137)||(23794483-23794603)
chr7 (18-137)||(12183255-12183375)
chr7 (18-137)||(19472912-19473032)
chr7 (18-137)||(2798193-2798313)
chr7 (18-137)||(45501283-45501404)
chr7 (18-137)||(2477070-2477190)
chr7 (18-137)||(31878011-31878131)
chr7 (58-137)||(31001380-31001460)
chr7 (58-138)||(31665267-31665348)
chr7 (53-125)||(8139848-8139920)
chr7 (58-137)||(24169408-24169488)
chr7 (73-137)||(20403075-20403140)
[»] chr6 (15 HSPs)
chr6 (18-138)||(26511153-26511274)
chr6 (18-138)||(26516269-26516390)
chr6 (18-137)||(9934637-9934757)
chr6 (18-138)||(3538436-3538557)
chr6 (18-137)||(34005894-34006014)
chr6 (18-137)||(24161877-24161996)
chr6 (21-137)||(31131276-31131392)
chr6 (18-117)||(26603636-26603734)
chr6 (18-137)||(15641714-15641833)
chr6 (46-117)||(2298307-2298378)
chr6 (58-139)||(5671728-5671810)
chr6 (137-206)||(14830392-14830461)
chr6 (46-99)||(18751341-18751394)
chr6 (137-209)||(35060904-35060976)
chr6 (58-138)||(24878405-24878486)
[»] scaffold0015 (2 HSPs)
scaffold0015 (18-137)||(174034-174154)
scaffold0015 (18-137)||(185192-185312)
[»] scaffold0002 (1 HSPs)
scaffold0002 (18-138)||(354392-354513)
[»] scaffold1494 (1 HSPs)
scaffold1494 (18-137)||(955-1074)
[»] scaffold0014 (1 HSPs)
scaffold0014 (48-137)||(79922-80012)
[»] scaffold0059 (1 HSPs)
scaffold0059 (20-137)||(17127-17245)
[»] scaffold0458 (1 HSPs)
scaffold0458 (21-140)||(10212-10331)
[»] scaffold0744 (1 HSPs)
scaffold0744 (18-137)||(1847-1966)
[»] scaffold0871 (1 HSPs)
scaffold0871 (58-137)||(4327-4407)


Alignment Details
Target: chr5 (Bit Score: 609; Significance: 0; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 609; E-Value: 0
Query Start/End: Original strand, 8 - 762
Target Start/End: Complemental strand, 6269436 - 6268677
Alignment:
Q  8 agaagcagagatgtaaagcataaatggtaaaaa-tacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaac 106  Q
    |||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6269436 agaatcagacatgtaaagcataaatggtaaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaac 6269337  T
Q  107 acatgaaatatgttacttt-gagcacttatcacatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataatt 205  Q
    ||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||| |||||||||||| ||||| | ||||||||| ||||    
T  6269336 acatgaaatatgttacttttgagcacttatcacatgcgcagggacattttggacatttacattgaaaatgagcgatactgtttggataatgagcagaatt 6269237  T
Q  206 caaagttcaagacatgtaaacccgttttgggattttgctcttttaacttcaaaaattgttatatttaacacaccgaaaatagcaaaatacctgcagcagt 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6269236 caaagttcaagacatgtaaacccgttttgggattttgctcttttaacttcaaaaattgttatatttaacactccgaaaatagcaaaatacctgcagcagt 6269137  T
Q  306 aaataatcgccctttgtttccaacggtaattaattgttgctcgctaacttttgttagaaattttttatttagtcaacagcacttaagtgccgttgttacc 405  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6269136 aattaatcgccctttgtttccaacggtaattaattgttgctcgctaacttttgttagaaattttttatttagtcaacaacacttaagtgccgttgttacc 6269037  T
Q  406 tgccaaattttcagttttggatttattatttgtaggtagcaaagcatagatccttttctcgttatgttggttcaagtgatcaagccatgtctatctttgt 505  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6269036 tgccaaatttttagttttggatttattatttgtaggtagcaaagcatagatccttttctcgttatgttgggtcaagtgatcaagccatgtctatctttgt 6268937  T
Q  506 ttattgtctattcttattattaacaggacagggttggattctatgattagaagtgttgctcaaggtttatgttcatggtgg-nnnnnnnngttggaattt 604  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||         ||||||||||    
T  6268936 ttattgtctattcttattattaacaggacagggttggattctatgattagaagttttgctcaatgtttatgttcatggtggtttttttttgttggaattt 6268837  T
Q  605 agtatcatgttggagttcttaaagtgatggaaggcctttaaccattaattag--nnnnnnnncaattggtgagtaaattaattgtatgatgaacgaatta 702  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||    
T  6268836 agtatcatgttggagttcttaaagtgatggaaggcctttaaccattaattagttttttttttcaattggtgagtaaattaattgtatgatgaacgaatta 6268737  T
Q  703 aaccagttaggcctttgaaatctgaaaattcaagaggtatactgaaatcgcaaagcaagt 762  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6268736 aaccagttaggcctttaaaatctgaaaattcaagaggtatactgaaatcgcaaagcaagt 6268677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 24835268 - 24835148
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  24835268 atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat 24835169  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  24835168 gttacttttgagcacttatca 24835148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 18 - 140
Target Start/End: Complemental strand, 14344001 - 14343878
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  14344001 atgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat 14343902  T
Q  118 gttac-tttgagcacttatcacat 140  Q
    ||||| ||||||||||||||||||    
T  14343901 gttacttttgagcacttatcacat 14343878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 7314494 - 7314374
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  7314494 atgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat 7314395  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  7314394 gttacttttgagcacttatca 7314374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 11723928 - 11724048
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  11723928 atgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat 11724027  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  11724028 gttacttttgagcacttatca 11724048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 30607833 - 30607953
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  30607833 atgtaaagcataaatggtaatattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat 30607932  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  30607933 gttacttttgagcacttatca 30607953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 33434116 - 33433996
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  33434116 atgtaaagcataaatggtaaaaatacactcaaatggtaacttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat 33434017  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| ||| |||||||||||    
T  33434016 gttacttttaagcacttatca 33433996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 34455703 - 34455583
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  34455703 atgtaaagcataaatggtaatattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat 34455604  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  34455603 gttacttttgagcacttatca 34455583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 8 - 137
Target Start/End: Complemental strand, 11766275 - 11766145
Alignment:
Q  8 agaagcagagatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaaca 107  Q
    |||| |||| |||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||| |||||||    
T  11766275 agaatcagacatgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacgagtcactaatttgcctaagttaaca 11766176  T
Q  108 catgaaatatgttac-tttgagcacttatca 137  Q
    ||||||||||||||| |||||||||||||||    
T  11766175 catgaaatatgttacttttgagcacttatca 11766145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 18 - 138
Target Start/End: Complemental strand, 9403829 - 9403708
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    ||||||||||||||| |||| | |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  9403829 atgtaaagcataaatagtaatattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat 9403730  T
Q  118 gttac-tttgagcacttatcac 138  Q
    ||||| ||||||||||||||||    
T  9403729 gttacttttgagcacttatcac 9403708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 13 - 133
Target Start/End: Original strand, 34870317 - 34870437
Alignment:
Q  13 cagagatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatga 112  Q
    |||| |||||||||||||||||||||||| ||  ||| || ||| ||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| |    
T  34870317 cagacatgtaaagcataaatggtaaaaatgcaa-caattgatagtttttccttagataacttgcaaaacaagccactaaaatgcctagattaacacataa 34870415  T
Q  113 aatatgttac-tttgagcactt 133  Q
    |||||||||| |||||||||||    
T  34870416 aatatgttacttttgagcactt 34870437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 18 - 125
Target Start/End: Complemental strand, 30422298 - 30422192
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    ||||||||||||||||| |||| |||  | ||||||||| ||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||    
T  30422298 atgtaaagcataaatggcaaaattacgat-aaatggtagtttttccttagataacttgcaaaacaagtcactaaaatgcctaaattaacacatgaaatat 30422200  T
Q  118 gttacttt 125  Q
     |||||||    
T  30422199 attacttt 30422192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 209
Target Start/End: Original strand, 1975311 - 1975383
Alignment:
Q  137 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattcaaa 209  Q
    ||||||| |||| |||||||||||||||| |||||||||||| ||  ||||| | ||||||||| ||||||||    
T  1975311 acatgcgcatgggcattttggacatttactttggaaatgagcaatgctgtttagataatgagcagaattcaaa 1975383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 1974212 - 1974154
Alignment:
Q  150 cattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattcaa 208  Q
    |||||||||||||||| |||| ||||||||||| | | | |||||||||||||||||||    
T  1974212 cattttggacatttactttgggaatgagcgatactatctgggtaatgagcataattcaa 1974154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 40008781 - 40008711
Alignment:
Q  137 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattca 207  Q
    ||||||| | || |||||| ||||||||| |||  ||||||||||||||||| ||||||||||| ||||||    
T  40008781 acatgcgcaggggcattttagacatttactttgagaatgagcgataatgtttaggtaatgagcagaattca 40008711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 208
Target Start/End: Complemental strand, 3458069 - 3458012
Alignment:
Q  151 attttggacatttacattggaaatgagcgataatgttttggtaatgagcataattcaa 208  Q
    ||||||||||||||| |||||||||||| |||  |||| ||||||||||| |||||||    
T  3458069 attttggacatttactttggaaatgagcaatacggtttcggtaatgagcagaattcaa 3458012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 42748256 - 42748309
Alignment:
Q  46 tcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgccta 99  Q
    |||||| |||| ||||||||| |||||||||||||||||| |||||| ||||||    
T  42748256 tcaaattgtagcttttccttaaataacttgcaaaacaagtaactaaagtgccta 42748309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 206
Target Start/End: Complemental strand, 1145210 - 1145141
Alignment:
Q  137 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattc 206  Q
    |||||||||  | |||||||| ||||||| |||| ||||||||| | ||||| | |||||||||||||||    
T  1145210 acatgcgtagaggcattttggtcatttactttgggaatgagcgaaactgtttggataatgagcataattc 1145141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 8e-51; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 8 - 137
Target Start/End: Original strand, 44432668 - 44432798
Alignment:
Q  8 agaagcagagatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaaca 107  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  44432668 agaatcagacatgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaaca 44432767  T
Q  108 catgaaatatgttac-tttgagcacttatca 137  Q
    ||||||||||||||| |||||||||||||||    
T  44432768 catgaaatatgttacttttgagcacttatca 44432798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 42533598 - 42533718
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||    
T  42533598 atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttagcacatgaaatat 42533697  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  42533698 gttacttttgagcacttatca 42533718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 5274288 - 5274408
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  5274288 atgtaaagcataaatggtaatattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat 5274387  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  5274388 gttacttttgagcacttatca 5274408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 46692791 - 46692910
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    ||||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  46692791 atgtaaagcataaatggtataaatacactcaaatgatagcttttccttagataacttgcaaaacaagtcactaaaatgcctagattaacacataaaatat 46692890  T
Q  118 gttactttgagcacttatca 137  Q
     |||||||||||||||||||    
T  46692891 attactttgagcacttatca 46692910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 22047256 - 22047136
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||    
T  22047256 atgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaaatcactaatttgcctaagttaacacatgaaatat 22047157  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  22047156 gttacttttgagcacttatca 22047136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 4839789 - 4839909
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||| | |||||||||||||| ||||||| |||||||||||||||||| ||||||| | ||||| |||||||||||||||||    
T  4839789 atgtaaagcataaatggtaaaattgcactcaaatggtagcttttcctcagataacttgcaaaacaaatcactaattcgcctaagttaacacatgaaatat 4839888  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  4839889 gttacttttgagcacttatca 4839909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 55326283 - 55326163
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    ||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| | ||||| |||| |||| ||||||    
T  55326283 atgtaaagcgtaaatggtacaaatacactcaaatggtagtttttccttagataacttgcagaacaagtcactaaacttcctagattaatacataaaatat 55326184  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  55326183 gttacttttgagcacttatca 55326163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 6639477 - 6639357
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||| ||||   |  |||||| ||||||||||||||||||||||||||||||| ||| ||||||  ||||||||||||||||    
T  6639477 atgtaaagcataaatggtaaaattacaacaagttggtagcttttccttagataacttgcaaaacaagtcaccaaaatgcctaaattaacacatgaaatat 6639378  T
Q  118 gttact-ttgagcacttatca 137  Q
     ||||| ||||||||||||||    
T  6639377 attactcttgagcacttatca 6639357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 19248436 - 19248555
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||||| ||  ||| || ||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| |||| |    
T  19248436 atgtaaagcataaatggtaaaaatgcaa-caattgatagattttccttagataacttgcaaaacaagccactaaagtgcctagattaacacataaaatgt 19248534  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||| | |||||||||||||||    
T  19248535 gttgcttttgagcacttatca 19248555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 26069189 - 26069070
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaat-ggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaata 116  Q
    ||||||||||||||||||||||  ||||  || | ||||| |||| ||||||||||||||| |||||||||||||| ||||||| ||||||||| |||||    
T  26069189 atgtaaagcataaatggtaaaataacac--aattaggtagctttttcttagataacttgcagaacaagtcactaaaatgcctagattaacacataaaata 26069092  T
Q  117 tgttac-tttgagcacttatca 137  Q
    |||||| |||||||||||||||    
T  26069091 tgttacttttgagcacttatca 26069070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 21 - 137
Target Start/End: Complemental strand, 8894342 - 8894226
Alignment:
Q  21 taaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgtt 120  Q
    |||||||||||||| | || |||| |||||| |||| ||| ||||||||||||||||||||||||||||||| ||||||  |||||||||||||||| |     
T  8894342 taaagcataaatggcataattaca-tcaaattgtagctttaccttagataacttgcaaaacaagtcactaaaatgcctaaattaacacatgaaatatatc 8894244  T
Q  121 a-ctttgagcacttatca 137  Q
    |  |||||||||||||||    
T  8894243 agttttgagcacttatca 8894226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 22 - 139
Target Start/End: Original strand, 35417446 - 35417563
Alignment:
Q  22 aaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgtta 121  Q
    |||||||||||||| ||| ||||  |||||| | | |||||||||||||| |||||||||||||||||||| |||||   ||||||||||||| ||  ||    
T  35417446 aaagcataaatggtcaaattacaa-caaatgattgcttttccttagataatttgcaaaacaagtcactaaaatgccttatttaacacatgaaagatagta 35417544  T
Q  122 c-tttgagcacttatcaca 139  Q
    | |||||||||||||||||    
T  35417545 cttttgagcacttatcaca 35417563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 40996292 - 40996408
Alignment:
Q  22 aaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttg-caaaacaagtcactaaattgcctaggttaacacatgaaatatgtt 120  Q
    |||||||||||||| ||| |||| | ||||| | | |||||||||||||||||| ||||||||||||||||| | ||||  ||||||||||||| ||  |    
T  40996292 aaagcataaatggtcaaattacaat-aaatgattgcttttccttagataacttgacaaaacaagtcactaaaatacctattttaacacatgaaagataat 40996390  T
Q  121 ac-tttgagcacttatca 137  Q
    || |||||||||||||||    
T  40996391 acttttgagcacttatca 40996408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 28796681 - 28796620
Alignment:
Q  145 atggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattc 206  Q
    ||||||||||||||||||||| |||  ||||||||||| ||||| ||||||||||| |||||    
T  28796681 atggacattttggacatttactttgagaatgagcgatattgtttgggtaatgagcagaattc 28796620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 206
Target Start/End: Complemental strand, 40451000 - 40450931
Alignment:
Q  137 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattc 206  Q
    ||||||||| || |||||| ||| ||||| |||| ||||||||||| ||||| ||||||||||| |||||    
T  40451000 acatgcgtaggggcattttcgacttttactttgggaatgagcgatactgtttaggtaatgagcagaattc 40450931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 206
Target Start/End: Complemental strand, 55523794 - 55523725
Alignment:
Q  137 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattc 206  Q
    ||||||||| || |||||| ||| ||||| ||| |||||||||||||||||| | ||||||||| |||||    
T  55523794 acatgcgtaggggcattttcgacttttactttgaaaatgagcgataatgtttggataatgagcagaattc 55523725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 28798167 - 28798223
Alignment:
Q  150 cattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattc 206  Q
    |||||||||||||||| |||  ||||||||||| ||||| ||||||||||| |||||    
T  28798167 cattttggacatttactttgagaatgagcgatactgtttgggtaatgagcagaattc 28798223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 92
Target Start/End: Original strand, 30219122 - 30219156
Alignment:
Q  58 ttttccttagataacttgcaaaacaagtcactaaa 92  Q
    |||||||||||||||||||| ||||||||||||||    
T  30219122 ttttccttagataacttgcagaacaagtcactaaa 30219156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 636617 - 636662
Alignment:
Q  161 tttacattggaaatgagcgataatgttttggtaatgagcataattc 206  Q
    ||||| |||||||| ||||||| ||||| |||||||||||||||||    
T  636617 tttactttggaaataagcgatactgtttgggtaatgagcataattc 636662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 188
Target Start/End: Original strand, 42099549 - 42099586
Alignment:
Q  151 attttggacatttacattggaaatgagcgataatgttt 188  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  42099549 attttggacatttactttggaaatgagcgatattgttt 42099586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 1e-49; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 29223223 - 29223103
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  29223223 atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat 29223124  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  29223123 gttacttttgagcacttatca 29223103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 29336522 - 29336402
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  29336522 atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat 29336423  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  29336422 gttacttttgagcacttatca 29336402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 8684092 - 8684213
Alignment:
Q  18 atgtaaagcataaatggtaaaa-atacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaata 116  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||    
T  8684092 atgtaaagcataaatggtaaaaaatacactcaaacggtagcttttccttagataacttgcaaaacaagtcactaattttcctaagttaacacatgaaata 8684191  T
Q  117 tgttac-tttgagcacttatca 137  Q
    | |||| |||||||||||||||    
T  8684192 ttttacttttgagcacttatca 8684213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 32522495 - 32522419
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaatt 94  Q
    ||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  32522495 atgtaaagcataaatggtataaatacactcaaatgatagcttttccttagataacttgcaaaacaagtcactaaatt 32522419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 36668492 - 36668611
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||||| ||  ||| || ||| ||||||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||||    
T  36668492 atgtaaagcataaatggtaaaaatgcaa-caattgatagcttttccttagataacttgcaaaacaagccactaaaatgcctagattaacacataaaatat 36668590  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||| | |||||||||||||||    
T  36668591 gttgcttttgagcacttatca 36668611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 29226794 - 29226729
Alignment:
Q  73 ttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatca 137  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||    
T  29226794 ttgcaaaacaagtcactaatttgcctaagttaacacatgaaatatgttacttttgagcacttatca 29226729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 29340093 - 29340028
Alignment:
Q  73 ttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatca 137  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||    
T  29340093 ttgcaaaacaagtcactaatttgcctaagttaacacatgaaatatgttacttttgagcacttatca 29340028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 206
Target Start/End: Original strand, 22496085 - 22496154
Alignment:
Q  137 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattc 206  Q
    ||||||||| || |||||| ||||||||| ||| |||||||||||| | ||| |||||||||||||||||    
T  22496085 acatgcgtaagggcattttagacatttactttgaaaatgagcgatactatttaggtaatgagcataattc 22496154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 137
Target Start/End: Complemental strand, 31757795 - 31757714
Alignment:
Q  58 ttttccttagataa-cttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatca 137  Q
    |||||| ||||||| ||||||||||||||||||||| ||||||   ||||||||||||||| | || |||||||||||||||    
T  31757795 ttttccatagataatcttgcaaaacaagtcactaaaatgcctaaactaacacatgaaatatatcacttttgagcacttatca 31757714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 29792636 - 29792584
Alignment:
Q  73 ttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttacttt 125  Q
    ||||| |||||||||||||| ||||||| ||||||||| ||||||||||||||    
T  29792636 ttgcagaacaagtcactaaaatgcctagattaacacataaaatatgttacttt 29792584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 18394992 - 18395049
Alignment:
Q  150 cattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattca 207  Q
    ||||||||||| |||| |||| ||||||||||| ||||| ||||||||||| ||||||    
T  18394992 cattttggacaattactttgggaatgagcgatattgtttgggtaatgagcagaattca 18395049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 137
Target Start/End: Complemental strand, 27256989 - 27256909
Alignment:
Q  58 ttttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatca 137  Q
    |||||| ||||||||||| | |||||||||||||| ||||||  |||||| | ||||||| | || |||||||||||||||    
T  27256989 ttttccatagataacttgtagaacaagtcactaaaatgcctaaattaacataagaaatatatcacttttgagcacttatca 27256909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 215
Target Start/End: Complemental strand, 2154328 - 2154253
Alignment:
Q  140 tgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattcaaagttcaa 215  Q
    |||||| ||||||||||  | ||||| |||| ||||||||||| ||||| ||||||||||| ||||| || |||||    
T  2154328 tgcgtagggacattttgatcttttactttgggaatgagcgatattgtttgggtaatgagcagaattccaaattcaa 2154253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 11573702 - 11573631
Alignment:
Q  137 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattcaa 208  Q
    |||| |||| || |||||| ||| ||||| |||| ||||||||||| ||||| ||||||||||| |||||||    
T  11573702 acatacgtaggggcatttttgacttttactttgggaatgagcgatattgtttgggtaatgagcagaattcaa 11573631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 2e-48; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 8 - 137
Target Start/End: Complemental strand, 3298321 - 3298191
Alignment:
Q  8 agaagcagagatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaaca 107  Q
    |||| |||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  3298321 agaatcagacatgtaaagcataaatggtaaaaataaactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaaca 3298222  T
Q  108 catgaaatatgttac-tttgagcacttatca 137  Q
    ||||||||||||||| |||||||||||||||    
T  3298221 catgaaatatgttacttttgagcacttatca 3298191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 27347556 - 27347436
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  27347556 atgtaaagcataaatggtaaaattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat 27347457  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  27347456 gttacttttgagcacttatca 27347436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 18 - 138
Target Start/End: Complemental strand, 22180019 - 22179898
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||| ||| ||||||    
T  22180019 atgtaaagcataaatggtaaaattacactcaaatggtagattttccttagataacttgcgaaacaagtcactaatttgcctaagttaacgcataaaatat 22179920  T
Q  118 gttac-tttgagcacttatcac 138  Q
    ||||| ||||||||||||||||    
T  22179919 gttacttttgagcacttatcac 22179898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 27353636 - 27353516
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||| | |||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  27353636 atgtaaagcataaatggtaaaattgcactcaaatgatagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat 27353537  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  27353536 gttacttttgagcacttatca 27353516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 28926796 - 28926916
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||    
T  28926796 atgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaaaaagtcactaatttgcctaagttaacacatgaaatat 28926895  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  28926896 gttacttttgagcacttatca 28926916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 8744020 - 8744140
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||  ||| | |||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||    
T  8744020 atgtaaagcataaataataatattacactcaaatggtagcttttccttagataacttgcaaaacaagtcaataatttgcctaagttaacacatgaaatat 8744119  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  8744120 gttacttttgagcacttatca 8744140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 9068819 - 9068939
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||  | |||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  9068819 atgtaaagcataaatggtaaagttgcactcaaatggtagcttttccttggataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat 9068918  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||| ||||||||||    
T  9068919 gttacttttgggcacttatca 9068939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 1606721 - 1606594
Alignment:
Q  8 agaagcagagatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaaca 107  Q
    |||| |||| ||||||| |||||||||||||| ||||  ||| ||  || |||| ||||||||||||||| |||||||||||||| ||||||  ||||||    
T  1606721 agaatcagacatgtaaaacataaatggtaaaagtacaa-caattgaaagctttttcttagataacttgcagaacaagtcactaaaatgcctaaattaaca 1606623  T
Q  108 catgaaatatgttac-tttgagcacttat 135  Q
    |||||||||| |||| |||||||||||||    
T  1606622 catgaaatatattacttttgagcacttat 1606594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 36737513 - 36737632
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    ||||||||||||||||||| | |||||  ||| || |||  ||||||||||||||||||| |||||||||| ||| ||||||| ||||||||| ||||||    
T  36737513 atgtaaagcataaatggtatagatacaa-caattgatagcctttccttagataacttgcagaacaagtcaccaaaatgcctagattaacacataaaatat 36737611  T
Q  118 gttac-tttgagcacttatca 137  Q
    | ||| ||| |||||||||||    
T  36737612 ggtactttttagcacttatca 36737632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 16957972 - 16957897
Alignment:
Q  63 cttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatca 137  Q
    |||||||||||||||||||||||||||||  ||||||| ||||| ||| ||||||||||| |||||||||||||||    
T  16957972 cttagataacttgcaaaacaagtcactaatatgcctagattaacgcataaaatatgttacttttgagcacttatca 16957897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 24040117 - 24040002
Alignment:
Q  22 aaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgtta 121  Q
    |||||||||||||| ||| ||||  |||||| | | ||||||||| ||||||| ||||||||||||||||| ||||||  ||||||||||||| ||  ||    
T  24040117 aaagcataaatggtcaaattacaa-caaatgattgcttttccttatataacttacaaaacaagtcactaaaatgcctattttaacacatgaaagataata 24040019  T
Q  122 c-tttgagcacttatca 137  Q
    | |||||||||||||||    
T  24040018 cttttgagcacttatca 24040002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 137
Target Start/End: Original strand, 4435540 - 4435620
Alignment:
Q  58 ttttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatca 137  Q
    |||||| ||||||||||||||||||| |||||||| ||||||  |||||||| ||||||| | || |||||||||||||||    
T  4435540 ttttccatagataacttgcaaaacaaatcactaaagtgcctaaattaacacaagaaatatatcacttttgagcacttatca 4435620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 138
Target Start/End: Complemental strand, 21687459 - 21687377
Alignment:
Q  58 ttttccttagataa-cttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatcac 138  Q
    |||||| ||||||| ||||||||||||||||||||| ||||||   ||||||||||||||| | || ||||||||||||||||    
T  21687459 ttttccatagataatcttgcaaaacaagtcactaaaatgcctaaactaacacatgaaatatatcacttttgagcacttatcac 21687377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 138
Target Start/End: Complemental strand, 21691783 - 21691701
Alignment:
Q  58 ttttccttagataa-cttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatcac 138  Q
    |||||| ||||||| ||||||||||||||||||||| ||||||   ||||||||||||||| | || ||||||||||||||||    
T  21691783 ttttccatagataatcttgcaaaacaagtcactaaaatgcctaaactaacacatgaaatatatcacttttgagcacttatcac 21691701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 28369642 - 28369585
Alignment:
Q  81 caagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatca 137  Q
    ||||||||||| || |||| |||||||||||||||||||||| |||||||||||||||    
T  28369642 caagtcactaatttacctaagttaacacatgaaatatgttacttttgagcacttatca 28369585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 99; Significance: 2e-48; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 16833402 - 16833524
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  16833402 atgtaaagcataaatggtaaaaatacaatcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat 16833501  T
Q  118 gttac-tttgagcacttatcaca 139  Q
    ||||| |||||||||||||||||    
T  16833502 gttacttttgagcacttatcaca 16833524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 38122689 - 38122809
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  38122689 atgtaaagcataaatggtaatattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat 38122788  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  38122789 gttacttttgagcacttatca 38122809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 12168828 - 12168948
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||    
T  12168828 atgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaaatcactaatttgcctaagttaacacatgaaatat 12168927  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  12168928 gttacttttgagcacttatca 12168948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 33492851 - 33492967
Alignment:
Q  22 aaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgtta 121  Q
    |||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  33492851 aaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatatgtta 33492950  T
Q  122 c-tttgagcacttatca 137  Q
    | |||||||||||||||    
T  33492951 cttttgagcacttatca 33492967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 13218687 - 13218807
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||    
T  13218687 atgtaaagcataaatggtataaatacactcaaatggtagcttttccttagataactttcaaaacaagtcactaaattacctagattaacacatgaaatat 13218786  T
Q  118 gtta-ctttgagcacttatca 137  Q
    ||||  |||||||| ||||||    
T  13218787 gttagttttgagcagttatca 13218807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 39453462 - 39453343
Alignment:
Q  21 taaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgtt 120  Q
    |||||||||||||| |||| ||||  |||||||||| ||||||||||||||||||||||||||||||||||| | ||||  ||||||||| | |||| ||    
T  39453462 taaagcataaatggcaaaattacaa-caaatggtagtttttccttagataacttgcaaaacaagtcactaaaatacctaaattaacacataacatatatt 39453364  T
Q  121 ac-tttgagcacttatcacat 140  Q
    || ||||||||||||||||||    
T  39453363 acttttgagcacttatcacat 39453343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 16129115 - 16129000
Alignment:
Q  22 aaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgtta 121  Q
    |||||||||||||| ||| ||||  |||||| | | |||||||||||||||||||||||||||||| |||| ||||||  ||||||||||||| ||| ||    
T  16129115 aaagcataaatggtcaaattacaa-caaatgattgcttttccttagataacttgcaaaacaagtcattaaaatgcctattttaacacatgaaagatggta 16129017  T
Q  122 c-tttgagcacttatca 137  Q
    | |||||||||||||||    
T  16129016 cttttgagcacttatca 16129000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 21 - 138
Target Start/End: Complemental strand, 25242523 - 25242405
Alignment:
Q  21 taaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgtt 120  Q
    |||||||||||||||||||| |  |   ||| |||| |||||||||||||||||||| ||||||||| |||| ||||||  |||||||||  ||||||||    
T  25242523 taaagcataaatggtaaaaaaatgcaacaatagtagcttttccttagataacttgcagaacaagtcattaaaatgcctaaattaacacatagaatatgtt 25242424  T
Q  121 a-ctttgagcacttatcac 138  Q
    |  ||||||||||||||||    
T  25242423 agttttgagcacttatcac 25242405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 139
Target Start/End: Complemental strand, 13829713 - 13829592
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||| |||| |||||| |||| | || |||||| ||||||| |||||||||| |  |||||| |||||| ||| ||  ||||||||||||||||    
T  13829713 atgtaaagcacaaatagtaaaagtacaat-aattggtagcttttcctcagataacttgtaggacaagttactaaaatgcataatttaacacatgaaatat 13829615  T
Q  118 gtta-ctttgagcacttatcaca 139  Q
     ||| ||||||||||||||||||    
T  13829614 attacctttgagcacttatcaca 13829592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 206
Target Start/End: Original strand, 33403135 - 33403204
Alignment:
Q  137 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattc 206  Q
    ||||||||| || |||||| ||| ||||| |||||||||||||||| ||||| |||||||||||||||||    
T  33403135 acatgcgtaggggcattttcgacttttactttggaaatgagcgatactgtttgggtaatgagcataattc 33403204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 210
Target Start/End: Complemental strand, 3792629 - 3792556
Alignment:
Q  137 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattcaaag 210  Q
    ||||||||| || |||||||||| ||||| |||||||||||||| | | ||| ||||||||||| |||||||||    
T  3792629 acatgcgtaagggcattttggacttttactttggaaatgagcgaaactatttgggtaatgagcagaattcaaag 3792556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 99
Target Start/End: Complemental strand, 7062789 - 7062712
Alignment:
Q  21 taaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgccta 99  Q
    ||||||||||||||||   || || |||||| |||| ||||| |||||||||||||||||||||| |||||| ||||||    
T  7062789 taaagcataaatggtatttattca-tcaaattgtagtttttctttagataacttgcaaaacaagtaactaaagtgccta 7062712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 206
Target Start/End: Original strand, 50069243 - 50069312
Alignment:
Q  137 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattc 206  Q
    ||||||| | || |||||||||||||||| |||| ||||||||||  ||||| ||||||||||| |||||    
T  50069243 acatgcgcaggggcattttggacatttactttgggaatgagcgatgctgtttgggtaatgagcagaattc 50069312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 137
Target Start/End: Original strand, 432869 - 432949
Alignment:
Q  58 ttttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatca 137  Q
    |||||| ||||||||||| | |||||||||||||| ||||||  |||||| | ||||||| | || |||||||||||||||    
T  432869 ttttccatagataacttgtagaacaagtcactaaaatgcctaaattaacataagaaatatatcacttttgagcacttatca 432949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 7e-48; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 52308635 - 52308768
Alignment:
Q  8 agaagcagagatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaaca 107  Q
    |||| |||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||| ||||||| |||||||    
T  52308635 agaatcagacatgtaaagcataaatggtaaaattacactcaaatggtagcttttccttagataacttgcaaagcaagtcactaatttgcctaagttaaca 52308734  T
Q  108 catgaaatatgttac-tttgagcacttatcacat 140  Q
    ||||||||||||||| ||||||||||||||||||    
T  52308735 catgaaatatgttacttttgagcacttatcacat 52308768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 10407602 - 10407722
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  10407602 atgtaaagcataaatggtaaaattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat 10407701  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  10407702 gttacttttgagcacttatca 10407722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 3587909 - 3587789
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  3587909 atgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat 3587810  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  3587809 gttacttttgagcacttatca 3587789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 27031439 - 27031559
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  27031439 atgtaaagcataaatggtaatattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat 27031538  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  27031539 gttacttttgagcacttatca 27031559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 52045535 - 52045655
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||    
T  52045535 atgtaaagcataaatggtaaaattacactcaaatggtagcttttccttagataacttgcaaaacaagtcacaaatttgcctaagttaacacatgaaatat 52045634  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  52045635 gttacttttgagcacttatca 52045655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 4755510 - 4755630
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||    
T  4755510 atgtaaggcataaatggtaaaaatacactcaaatggtaacttttccttagataacttgcaaaacaagtcactaatttgcctaatttaacacatgaaatat 4755609  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  4755610 gttacttttgagcacttatca 4755630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 7653876 - 7653992
Alignment:
Q  22 aaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgtta 121  Q
    |||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  7653876 aaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatatgtta 7653975  T
Q  122 c-tttgagcacttatca 137  Q
    | |||||||||||||||    
T  7653976 cttttgagcacttatca 7653992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 8615033 - 8614914
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||    
T  8615033 atgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgc-aaacaagtcactaatttgcctaagttaacacatgaaatat 8614935  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  8614934 gttacttttgagcacttatca 8614914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 36470081 - 36470201
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    ||||||||||||| ||||| ||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||| ||||||||| ||||||    
T  36470081 atgtaaagcataattggtataaatacactcaaatggtagcttttccttggataacttgcaaaacaaatcactaaattgcctagattaacacattaaatat 36470180  T
Q  118 gttac-tttgagcacttatca 137  Q
    | ||| |||||||||||||||    
T  36470181 ggtacttttgagcacttatca 36470201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 11263597 - 11263705
Alignment:
Q  29 aaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac--tttg 126  Q
    |||||||||||||||||||||||| |||  || |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||  ||||    
T  11263597 aaatggtaaaaatacactcaaatgctagcgttaccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatatgttactttttg 11263696  T
Q  127 agcacttat 135  Q
    |||||||||    
T  11263697 agcacttat 11263705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 33247417 - 33247298
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    ||||||||||||||||||||||  ||||  |  | |||| |||||||||||||||||||| |||||||||||||| ||||||| ||||||||| ||||||    
T  33247417 atgtaaagcataaatggtaaaagaacaca-atttagtagcttttccttagataacttgcagaacaagtcactaaaatgcctagattaacacataaaatat 33247319  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  33247318 gttacttttgagcacttatca 33247298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 206
Target Start/End: Complemental strand, 42381684 - 42381615
Alignment:
Q  137 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattc 206  Q
    ||||||||| || |||||||||||||||| |||||||||||||||  ||||| ||||||||||| |||||    
T  42381684 acatgcgtaagggcattttggacatttactttggaaatgagcgatgttgtttaggtaatgagcagaattc 42381615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 53827670 - 53827740
Alignment:
Q  137 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattca 207  Q
    ||||||||| || |||||||||||||||| |||| ||||||||||| | ||| ||||||||||| ||||||    
T  53827670 acatgcgtaggggcattttggacatttactttgggaatgagcgatactatttaggtaatgagcagaattca 53827740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 206
Target Start/End: Original strand, 15042015 - 15042084
Alignment:
Q  137 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattc 206  Q
    ||||||||| || |||||| ||| ||||| |||| ||||||||||| ||||| ||||||||||| |||||    
T  15042015 acatgcgtaggggcattttcgacttttactttgggaatgagcgatattgtttgggtaatgagcagaattc 15042084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 206
Target Start/End: Complemental strand, 19866802 - 19866733
Alignment:
Q  137 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattc 206  Q
    ||||||||| || |||||| ||| ||||| |||| ||||||||||| ||||| ||||||||||| |||||    
T  19866802 acatgcgtaggggcatttttgacttttactttgggaatgagcgatactgtttgggtaatgagcagaattc 19866733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 207
Target Start/End: Original strand, 42994912 - 42994974
Alignment:
Q  145 atggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattca 207  Q
    |||| |||||| ||||||||| |||| ||||||||||| | ||| ||||||||||| ||||||    
T  42994912 atgggcattttagacatttactttgggaatgagcgatactatttaggtaatgagcagaattca 42994974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 206
Target Start/End: Original strand, 7666971 - 7667040
Alignment:
Q  137 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattc 206  Q
    ||||||||| || |||||| ||| ||||  |||| ||||||||||| ||||| ||||||||||| |||||    
T  7666971 acatgcgtaggggcatttttgacttttattttgggaatgagcgatactgtttgggtaatgagcaaaattc 7667040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 95; Significance: 5e-46; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 8 - 137
Target Start/End: Original strand, 117273 - 117403
Alignment:
Q  8 agaagcagagatgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaaca 107  Q
    |||| |||| ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  117273 agaatcagacatgtaaagcataaatggtataaacacactcaaatggtagcttttccttagataactttcaaaacaagtcactaaattgcctagattaaca 117372  T
Q  108 catgaaatatgttac-tttgagcacttatca 137  Q
    ||||||||||||||| |||||||||||||||    
T  117373 catgaaatatgttacttttgagcacttatca 117403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 5e-46; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 31158928 - 31159050
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  31158928 atgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat 31159027  T
Q  118 gttac-tttgagcacttatcaca 139  Q
    ||||| |||||||||||||||||    
T  31159028 gttacttttgagcacttatcaca 31159050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 22322536 - 22322656
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||    
T  22322536 atgtaaagcataaatggtaaaattacactcaaatggtagcttttccttagataacttgcaaaacaagtcgctaatttgcctaagttaacacatgaaatat 22322635  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  22322636 gttacttttgagcacttatca 22322656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 22817948 - 22817828
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||| |||||||| ||||||||    
T  22817948 atgtaaagcataaatggtaaaaatacactcaaatggtagcttttccttagataacttgcaaaacaagtcactattttgcctaagttaacacctgaaatat 22817849  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  22817848 gttacttttgagcacttatca 22817828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 2630926 - 2630810
Alignment:
Q  22 aaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgtta 121  Q
    |||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  2630926 aaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatatgtta 2630827  T
Q  122 c-tttgagcacttatca 137  Q
    | |||||||||||||||    
T  2630826 cttttgagcacttatca 2630810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 7143167 - 7143047
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||    
T  7143167 atgtaaagcataaatggtaatattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaattttcctaagttaacacatgaaatat 7143068  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  7143067 gttacttttgagcacttatca 7143047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 10346958 - 10347078
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||    
T  10346958 atgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaaaat 10347057  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  10347058 gttacttttgagcacttatca 10347078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 23794603 - 23794483
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||| ||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  23794603 atgtaaagaataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat 23794504  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  23794503 gttacttttgagcacttatca 23794483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 12183375 - 12183255
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| || | || |||||||||||||||||    
T  12183375 atgtgaagcataaatggtaaaaatacactcaaatggtagcttttccttagataacttgcaaaacaggtcactaatttacataagttaacacatgaaatat 12183276  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  12183275 gttacttttgagcacttatca 12183255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 19472912 - 19473032
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||| |||||||  ||||||||||||||||    
T  19472912 atgtaaagcataaatggtaaaaatacactcaaaaggtagcttttccttagataacttgcaaaataagtcactaatttgcctaaattaacacatgaaatat 19473011  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| ||| |||||||||||    
T  19473012 gttacttttaagcacttatca 19473032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 2798193 - 2798313
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    ||||||||||||||||||| ||||||||||||||| | | |||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||    
T  2798193 atgtaaagcataaatggtataaatacactcaaatgattgtttttccttagataacttgcagaacaagtcactaaattgcctagattaacacataaaatat 2798292  T
Q  118 gtta-ctttgagcacttatca 137  Q
    ||||  ||||| |||||||||    
T  2798293 gttatttttgaacacttatca 2798313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 45501283 - 45501404
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaac-aagtcactaaattgcctaggttaacacatgaaata 116  Q
    ||||||| ||||||||||| ||||||||||||||| ||| |||||||||||||| || |||||| ||||||||||||||||||| ||| |||||||||||    
T  45501283 atgtaaaacataaatggtataaatacactcaaatgatagcttttccttagataaatttcaaaactaagtcactaaattgcctagattagcacatgaaata 45501382  T
Q  117 tgttac-tttgagcacttatca 137  Q
    |||||| |||||||||||||||    
T  45501383 tgttacttttgagcacttatca 45501404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 2477190 - 2477070
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    ||||||| |||||||||||||||||||||||| | |||| |||| ||||||||| |||||||||||||||||||| ||||||||||||| ||| ||||||    
T  2477190 atgtaaaacataaatggtaaaaatacactcaattagtagctttttcttagataagttgcaaaacaagtcactaaaatgcctaggttaacgcataaaatat 2477091  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| ||||| |||||||||    
T  2477090 gttacttttgatcacttatca 2477070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 31878131 - 31878011
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    ||||||||||||||||||| ||||||||||||||| ||| |||||| |||||||||||||  | ||||||||||||| ||||  ||||||||| ||||||    
T  31878131 atgtaaagcataaatggtataaatacactcaaatgatagcttttccctagataacttgcaggataagtcactaaattacctatattaacacataaaatat 31878032  T
Q  118 gtt-actttgagcacttatca 137  Q
     || ||||| |||||||||||    
T  31878031 attaactttaagcacttatca 31878011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 58 - 137
Target Start/End: Original strand, 31001380 - 31001460
Alignment:
Q  58 ttttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatca 137  Q
    |||| ||||||||||||| | |||||||||||||| ||||||| ||||||||| ||||||||||| |||||||||||||||    
T  31001380 tttttcttagataacttggagaacaagtcactaaaatgcctagattaacacataaaatatgttacttttgagcacttatca 31001460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 138
Target Start/End: Original strand, 31665267 - 31665348
Alignment:
Q  58 ttttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatcac 138  Q
    |||||||||||||||||||| |||||||||||  | ||| ||  |||||||||||||||| |||| ||||||||||||||||    
T  31665267 ttttccttagataacttgcataacaagtcactgtaatgcatattttaacacatgaaatatattacttttgagcacttatcac 31665348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 8139848 - 8139920
Alignment:
Q  53 gtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttacttt 125  Q
    |||| ||||||||||||||| ||||||| ||||||||||| ||||||   ||||||||||||||| |||||||    
T  8139848 gtagcttttccttagataacctgcaaaataagtcactaaagtgcctaaaataacacatgaaatatattacttt 8139920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 137
Target Start/End: Original strand, 24169408 - 24169488
Alignment:
Q  58 ttttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatca 137  Q
    |||||||||  ||||||||||||||| |||||||| ||||||   ||| ||||||||||| | || |||||||||||||||    
T  24169408 ttttccttaagtaacttgcaaaacaaatcactaaagtgcctaaaataatacatgaaatatatcacttttgagcacttatca 24169488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 20403140 - 20403075
Alignment:
Q  73 ttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatca 137  Q
    ||||||||||| |||||||| ||||||  |||||||| ||||||| | || |||||||||||||||    
T  20403140 ttgcaaaacaaatcactaaagtgcctaaattaacacaagaaatatatcacttttgagcacttatca 20403075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 2e-45; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 26511153 - 26511274
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  26511153 atgtaaagcataaatggtaaaattatactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat 26511252  T
Q  118 gttac-tttgagcacttatcac 138  Q
    ||||| ||||||||||||||||    
T  26511253 gttacttttgagcacttatcac 26511274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 26516269 - 26516390
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  26516269 atgtaaagcataaatggtaaaattatactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat 26516368  T
Q  118 gttac-tttgagcacttatcac 138  Q
    ||||| ||||||||||||||||    
T  26516369 gttacttttgagcacttatcac 26516390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 9934637 - 9934757
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||    
T  9934637 atgtaaagcataaatggtaaaaatacactcaaatggtagtttttccttagataacttgcaaaacaagtcactaatttacctaagttaacacatgaaatat 9934736  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| ||| |||||||||||    
T  9934737 gttacttttaagcacttatca 9934757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 18 - 138
Target Start/End: Complemental strand, 3538557 - 3538436
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||||    
T  3538557 atgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacgagtcactaatttgcctaagttaacacatgaaatat 3538458  T
Q  118 gttac-tttgagcacttatcac 138  Q
    ||||| ||||||||||||||||    
T  3538457 gttacttttgagcacttatcac 3538436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 34006014 - 34005894
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||| | ||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  34006014 atgtaaagcataaatggtaaaattgcactcaaatggtagcatttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat 34005915  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  34005914 gttacttttgagcacttatca 34005894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 24161877 - 24161996
Alignment:
Q  18 atgtaaagcataaatggtaaaa-atacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaata 116  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||  || |    
T  24161877 atgtaaagcataaatggtaaaaaatacactcaaatggtagcttttccttatataacttgcaaaacaagtctctaatttgcctaagttaacacat--aaaa 24161974  T
Q  117 tgttac-tttgagcacttatca 137  Q
    |||||| |||||||||||||||    
T  24161975 tgttacttttgagcacttatca 24161996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 21 - 137
Target Start/End: Complemental strand, 31131392 - 31131276
Alignment:
Q  21 taaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgtt 120  Q
    |||||||||||||||| |||||||  ||| || ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||    
T  31131392 taaagcataaatggtataaatacaa-caattgatagattttccttagataacttgcaaaacaagtcactaaaatgcctagattaacacataaaatatgtt 31131294  T
Q  121 ac-tttgagcacttatca 137  Q
    || ||| |||||||||||    
T  31131293 acttttaagcacttatca 31131276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 26603734 - 26603636
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||| ||||  ||| ||||| |||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||    
T  26603734 atgtaaagcataaatggtaaaagtacaa-caattggtacattttccttagataacttgcaaaacaagtcactaaaatgcctaaattaacacatgaaatat 26603636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 15641833 - 15641714
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||| ||||  ||| |||||| |||||||||||||||||||| |||||||||||||| | ||||  |||||| | ||| ||     
T  15641833 atgtaaagcataaatggtaaaagtacaa-caattggtagcttttccttagataacttgcagaacaagtcactaaaatacctaatttaacataagaattaa 15641735  T
Q  118 gttac-tttgagcacttatca 137  Q
     |||| |||||||||||||||    
T  15641734 attacttttgagcacttatca 15641714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 117
Target Start/End: Complemental strand, 2298378 - 2298307
Alignment:
Q  46 tcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||| || |||   |||||||||||||||    
T  2298378 tcaaattgtagtttttccttagataacttgcaaaacaagtcactaaagtgtctaaaataacacatgaaatat 2298307  T

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Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 5671728 - 5671810
Alignment:
Q  58 ttttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatcaca 139  Q
    |||||| ||||||||||| | |||||||||||||| ||||||  |||||| | ||||||| | || |||||||||||||||||    
T  5671728 ttttccatagataacttgtagaacaagtcactaaaatgcctaaattaacataagaaatatatcacttttgagcacttatcaca 5671810  T

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Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 206
Target Start/End: Complemental strand, 14830461 - 14830392
Alignment:
Q  137 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattc 206  Q
    ||||| ||| ||||||||||||||||||| |||| ||||||||||| |||||  ||||| | ||||||||    
T  14830461 acatgtgtagggacattttggacatttactttgggaatgagcgatactgtttgagtaataaacataattc 14830392  T

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Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 99
Target Start/End: Original strand, 18751341 - 18751394
Alignment:
Q  46 tcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgccta 99  Q
    |||||| |||| ||||||||| |||||||||||||||||| |||||| ||||||    
T  18751341 tcaaattgtagtttttccttaaataacttgcaaaacaagtaactaaagtgccta 18751394  T

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Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 209
Target Start/End: Original strand, 35060904 - 35060976
Alignment:
Q  137 acatgcgtatggacattttggacatttacattggaaatgagcgataatgttttggtaatgagcataattcaaa 209  Q
    ||||||||| || |||||||||||||||| |||||||||||||  |   ||| ||||||||||| ||||||||    
T  35060904 acatgcgtaggggcattttggacatttactttggaaatgagcggaatcatttgggtaatgagcagaattcaaa 35060976  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 138
Target Start/End: Complemental strand, 24878486 - 24878405
Alignment:
Q  58 ttttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatcac 138  Q
    |||||| ||||||||||| | |||||||||||||| ||||||   ||||| | ||||||| | || ||||||||||||||||    
T  24878486 ttttccatagataacttgtagaacaagtcactaaaatgcctaaactaacataagaaatatatcacttttgagcacttatcac 24878405  T

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Target: scaffold0015 (Bit Score: 93; Significance: 7e-45; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 174154 - 174034
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  174154 atgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatat 174055  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  174054 gttacttttgagcacttatca 174034  T

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Target: scaffold0015; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 185312 - 185192
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||| | |||||||||||||| ||||||||| |||||||||||||||||||| ||| || |||| |||||||||||||||||    
T  185312 atgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttatataacttgcaaaacaagtcattaattttcctaagttaacacatgaaatat 185213  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  185212 gttacttttgagcacttatca 185192  T

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Target: scaffold0002 (Bit Score: 90; Significance: 4e-43; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 354392 - 354513
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||    
T  354392 atgtaaagcataaatggtaatattacactcaaatggtagcttttccttagataacttgcaaaacaagtcactaatttgtctaagttaacacatgaaatat 354491  T
Q  118 gttac-tttgagcacttatcac 138  Q
    ||||| ||||||||||||||||    
T  354492 gttacttttgagcacttatcac 354513  T

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Target: scaffold1494 (Bit Score: 85; Significance: 4e-40; HSPs: 1)
Name: scaffold1494
Description:

Target: scaffold1494; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 1074 - 955
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    |||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||    
T  1074 atgtaaagcataaatggtaaaattgcactcaaatggtagcttttccttagataacttgc-aaacaagtcactaatttgcctaagttaacacatgaaatat 976  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  975 gttacttttgagcacttatca 955  T

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Target: scaffold0014 (Bit Score: 71; Significance: 1e-31; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 48 - 137
Target Start/End: Original strand, 79922 - 80012
Alignment:
Q  48 aaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatca 137  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||    
T  79922 aaatggtagcttttccttagataacttgcaaaacaagtcactaatttgcctaagttaacacatgaaatatgttacttttgagcacttatca 80012  T

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Target: scaffold0059 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 17127 - 17245
Alignment:
Q  20 gtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgt 119  Q
    ||||||||||||||||| ||||||| |||  | || | ||||||||||||||||||||||||||||||||||   |||||||||||||||| ||||||||    
T  17127 gtaaagcataaatggtacaaatacaatcacttagtggcttttccttagataacttgcaaaacaagtcactaacaagcctaggttaacacataaaatatgt 17226  T
Q  120 tac-tttgagcacttatca 137  Q
    ||| |||||||||||||||    
T  17227 tacttttgagcacttatca 17245  T

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Target: scaffold0458 (Bit Score: 61; Significance: 9e-26; HSPs: 1)
Name: scaffold0458
Description:

Target: scaffold0458; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 21 - 140
Target Start/End: Original strand, 10212 - 10331
Alignment:
Q  21 taaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgtt 120  Q
    |||||||||||||| |||| ||||  |||||||||| ||||||||||||||||||||||||||||||||||| | ||||  ||||||||| | |||| ||    
T  10212 taaagcataaatggcaaaattacaa-caaatggtagtttttccttagataacttgcaaaacaagtcactaaaatacctaaattaacacataacatatatt 10310  T
Q  121 ac-tttgagcacttatcacat 140  Q
    || ||||||||||||||||||    
T  10311 acttttgagcacttatcacat 10331  T

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Target: scaffold0744 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 1966 - 1847
Alignment:
Q  18 atgtaaagcataaatggtaaaaatacactcaaatggtagattttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatat 117  Q
    ||||||||||||||||||||||  ||||  |  |||||| |||||||||||||||||||| ||||||| |||||| ||||||  ||||||||| ||||||    
T  1966 atgtaaagcataaatggtaaaagaacaca-atttggtagcttttccttagataacttgcagaacaagtaactaaaatgcctaaattaacacataaaatat 1868  T
Q  118 gttac-tttgagcacttatca 137  Q
    ||||| |||||||||||||||    
T  1867 gttacttttgagcacttatca 1847  T

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Target: scaffold0871 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0871
Description:

Target: scaffold0871; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 137
Target Start/End: Complemental strand, 4407 - 4327
Alignment:
Q  58 ttttccttagataacttgcaaaacaagtcactaaattgcctaggttaacacatgaaatatgttac-tttgagcacttatca 137  Q
    |||||| ||||||||||| ||||  |||||||||| |||||| | ||||||||||||| | | || |||||||||||||||    
T  4407 ttttccatagataacttgtaaaatcagtcactaaaatgcctaagctaacacatgaaatctatcacttttgagcacttatca 4327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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