View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8948_low_8 (Length: 243)

Name: NF8948_low_8
Description: NF8948
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8948_low_8
NF8948_low_8
[»] scaffold0056 (1 HSPs)
scaffold0056 (2-241)||(66283-66522)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-241)||(109437-109677)
scaffold0004 (90-220)||(59637-59771)
[»] chr5 (24 HSPs)
chr5 (1-231)||(20469665-20469895)
chr5 (4-177)||(25250442-25250614)
chr5 (4-177)||(25314227-25314399)
chr5 (1-241)||(21618581-21618820)
chr5 (1-225)||(29914562-29914786)
chr5 (89-220)||(22357585-22357716)
chr5 (89-220)||(8952679-8952808)
chr5 (6-126)||(10953362-10953481)
chr5 (120-227)||(20565696-20565803)
chr5 (1-128)||(25576632-25576758)
chr5 (54-127)||(23470021-23470094)
chr5 (63-121)||(20572112-20572170)
chr5 (63-128)||(25574307-25574372)
chr5 (63-128)||(25575500-25575565)
chr5 (64-111)||(5889016-5889063)
chr5 (89-125)||(18318942-18318978)
chr5 (63-127)||(21731298-21731362)
chr5 (63-127)||(21809418-21809482)
chr5 (97-215)||(21406320-21406438)
chr5 (63-116)||(21328052-21328105)
chr5 (84-220)||(24277230-24277364)
chr5 (84-220)||(24384849-24384983)
chr5 (63-128)||(26740484-26740549)
chr5 (89-125)||(20765993-20766029)
[»] chr2 (22 HSPs)
chr2 (1-241)||(27851850-27852090)
chr2 (5-227)||(44071777-44071999)
chr2 (1-241)||(27860556-27860796)
chr2 (1-215)||(18390869-18391083)
chr2 (25-241)||(25141358-25141574)
chr2 (1-227)||(22259258-22259484)
chr2 (1-241)||(3539011-3539252)
chr2 (1-202)||(5985396-5985595)
chr2 (24-175)||(10897102-10897253)
chr2 (1-135)||(25045384-25045516)
chr2 (89-196)||(6477919-6478026)
chr2 (1-123)||(14693601-14693723)
chr2 (120-226)||(25141183-25141289)
chr2 (63-128)||(23004968-23005033)
chr2 (42-121)||(18546762-18546840)
chr2 (42-128)||(23287581-23287666)
chr2 (1-114)||(21242914-21243026)
chr2 (54-127)||(34137159-34137232)
chr2 (63-122)||(20520030-20520089)
chr2 (63-121)||(26392606-26392664)
chr2 (179-220)||(9784921-9784962)
chr2 (64-128)||(43947210-43947274)
[»] chr8 (38 HSPs)
chr8 (1-202)||(36727694-36727895)
chr8 (1-241)||(31723149-31723389)
chr8 (1-241)||(22318495-22318735)
chr8 (1-220)||(17907508-17907727)
chr8 (4-220)||(17217881-17218097)
chr8 (1-220)||(23947494-23947711)
chr8 (28-220)||(22244697-22244888)
chr8 (1-241)||(45470998-45471238)
chr8 (90-220)||(23889018-23889148)
chr8 (1-128)||(9546-9672)
chr8 (54-213)||(20024876-20025035)
chr8 (90-215)||(22584362-22584488)
chr8 (1-89)||(23900643-23900731)
chr8 (1-135)||(19699446-19699579)
chr8 (144-241)||(36728008-36728105)
chr8 (120-241)||(31723458-31723579)
chr8 (1-128)||(22381510-22381637)
chr8 (1-116)||(22525746-22525860)
chr8 (1-127)||(22252941-22253067)
chr8 (1-135)||(25848986-25849118)
chr8 (1-127)||(20501877-20502003)
chr8 (63-127)||(22963257-22963321)
chr8 (1-127)||(17085930-17086055)
chr8 (63-121)||(20533246-20533304)
chr8 (63-128)||(23668027-23668092)
chr8 (63-128)||(37515923-37515988)
chr8 (170-241)||(5760851-5760922)
chr8 (63-121)||(14103062-14103120)
chr8 (63-121)||(17439343-17439401)
chr8 (63-128)||(40492690-40492755)
chr8 (1-88)||(23418753-23418840)
chr8 (64-111)||(39834065-39834112)
chr8 (89-123)||(23450847-23450881)
chr8 (89-123)||(34301925-34301959)
chr8 (179-220)||(6102464-6102505)
chr8 (63-116)||(19154723-19154776)
chr8 (179-220)||(21346071-21346112)
chr8 (89-125)||(26222945-26222981)
[»] chr1 (23 HSPs)
chr1 (5-241)||(13302059-13302295)
chr1 (5-202)||(42697031-42697227)
chr1 (90-220)||(51476270-51476400)
chr1 (4-135)||(45754838-45754968)
chr1 (89-220)||(52983439-52983570)
chr1 (89-220)||(18823900-18824031)
chr1 (89-220)||(13528417-13528552)
chr1 (90-220)||(18270555-18270689)
chr1 (90-220)||(18275209-18275343)
chr1 (1-114)||(22124517-22124630)
chr1 (1-88)||(24726742-24726829)
chr1 (60-126)||(19761824-19761889)
chr1 (63-128)||(52940715-52940780)
chr1 (63-122)||(26065163-26065222)
chr1 (63-121)||(20346029-20346087)
chr1 (63-121)||(27653060-27653118)
chr1 (54-127)||(21043110-21043183)
chr1 (64-128)||(47190819-47190883)
chr1 (64-111)||(28194289-28194336)
chr1 (179-220)||(14238324-14238365)
chr1 (1-114)||(20958340-20958452)
chr1 (63-116)||(35260918-35260971)
chr1 (179-220)||(51082515-51082556)
[»] scaffold0251 (1 HSPs)
scaffold0251 (1-227)||(20564-20790)
[»] chr7 (42 HSPs)
chr7 (1-231)||(4071008-4071237)
chr7 (1-241)||(15096225-15096465)
chr7 (1-220)||(15281555-15281773)
chr7 (26-227)||(15139408-15139610)
chr7 (1-241)||(14219553-14219793)
chr7 (5-225)||(19557869-19558089)
chr7 (1-213)||(13132907-13133119)
chr7 (21-241)||(48809090-48809309)
chr7 (25-241)||(16077593-16077809)
chr7 (90-220)||(11053924-11054054)
chr7 (60-218)||(8135720-8135878)
chr7 (1-127)||(42462168-42462294)
chr7 (120-241)||(13133216-13133337)
chr7 (1-126)||(36705208-36705332)
chr7 (90-220)||(3289446-3289580)
chr7 (63-128)||(9177503-9177568)
chr7 (89-177)||(21735127-21735215)
chr7 (1-241)||(22000804-22001043)
chr7 (63-128)||(16091975-16092040)
chr7 (63-122)||(14036422-14036481)
chr7 (63-122)||(14044972-14045031)
chr7 (63-122)||(14346452-14346511)
chr7 (63-122)||(14355002-14355061)
chr7 (63-121)||(17017305-17017363)
chr7 (63-128)||(9725497-9725562)
chr7 (63-127)||(9033183-9033247)
chr7 (54-115)||(130644-130705)
chr7 (90-135)||(13255914-13255959)
chr7 (90-135)||(13256009-13256054)
chr7 (170-241)||(1489934-1490005)
chr7 (45-128)||(16996439-16996522)
chr7 (60-121)||(10659564-10659624)
chr7 (179-220)||(14258691-14258732)
chr7 (179-220)||(14929044-14929085)
chr7 (179-220)||(15352510-15352551)
chr7 (179-220)||(16460604-16460645)
chr7 (179-220)||(16579999-16580040)
chr7 (179-220)||(16585623-16585664)
chr7 (179-220)||(32301521-32301562)
chr7 (160-220)||(43277518-43277579)
chr7 (63-127)||(11768756-11768820)
chr7 (89-125)||(48273600-48273636)
[»] chr3 (42 HSPs)
chr3 (1-220)||(16059523-16059742)
chr3 (1-220)||(16044663-16044882)
chr3 (32-220)||(13179435-13179623)
chr3 (25-227)||(11562905-11563107)
chr3 (1-220)||(16050140-16050357)
chr3 (22-241)||(17258786-17259005)
chr3 (90-215)||(20417377-20417502)
chr3 (1-135)||(11886211-11886344)
chr3 (89-220)||(14818318-14818449)
chr3 (89-220)||(52338592-52338723)
chr3 (137-226)||(11192224-11192313)
chr3 (120-241)||(11562697-11562818)
chr3 (4-120)||(12512361-12512476)
chr3 (89-220)||(17548174-17548309)
chr3 (1-88)||(14250663-14250750)
chr3 (90-212)||(11850279-11850405)
chr3 (149-241)||(6155906-6155998)
chr3 (89-220)||(10550562-10550693)
chr3 (64-127)||(32402799-32402862)
chr3 (89-212)||(52213105-52213227)
chr3 (90-215)||(45531247-45531370)
chr3 (170-241)||(14441486-14441557)
chr3 (60-114)||(15447599-15447654)
chr3 (170-241)||(17046480-17046551)
chr3 (170-241)||(54876146-54876217)
chr3 (179-241)||(19569041-19569103)
chr3 (54-128)||(37427932-37428006)
chr3 (89-125)||(21618656-21618692)
chr3 (89-125)||(36166805-36166841)
chr3 (63-126)||(316339-316402)
chr3 (170-241)||(11192399-11192470)
chr3 (82-121)||(13919554-13919593)
chr3 (170-241)||(17691468-17691539)
chr3 (89-123)||(12158658-12158692)
chr3 (179-220)||(12470141-12470182)
chr3 (179-220)||(14671163-14671204)
chr3 (179-220)||(14682662-14682703)
chr3 (64-121)||(15246244-15246301)
chr3 (179-220)||(18700145-18700186)
chr3 (179-220)||(42353385-42353426)
chr3 (179-220)||(43889471-43889512)
chr3 (90-134)||(23395699-23395743)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-241)||(136157-136397)
[»] scaffold0445 (1 HSPs)
scaffold0445 (5-220)||(2475-2691)
[»] scaffold0002 (2 HSPs)
scaffold0002 (32-220)||(127365-127553)
scaffold0002 (1-158)||(397852-398008)
[»] chr6 (31 HSPs)
chr6 (1-220)||(31735463-31735681)
chr6 (1-220)||(6083327-6083547)
chr6 (1-241)||(23500899-23501139)
chr6 (1-125)||(22376453-22376577)
chr6 (89-220)||(13750981-13751112)
chr6 (89-215)||(24267064-24267190)
chr6 (94-220)||(22212139-22212266)
chr6 (1-128)||(20077950-20078077)
chr6 (1-120)||(24550821-24550939)
chr6 (5-126)||(16245567-16245687)
chr6 (120-215)||(23491974-23492069)
chr6 (120-215)||(23497572-23497667)
chr6 (90-212)||(5110399-5110525)
chr6 (54-127)||(18453401-18453474)
chr6 (63-121)||(18696712-18696770)
chr6 (63-121)||(20224168-20224226)
chr6 (63-121)||(22118152-22118210)
chr6 (1-128)||(15896154-15896280)
chr6 (93-212)||(5289761-5289884)
chr6 (2-128)||(20136887-20137013)
chr6 (2-128)||(22195856-22195982)
chr6 (63-121)||(33443270-33443328)
chr6 (89-125)||(16448435-16448471)
chr6 (63-127)||(16493366-16493430)
chr6 (54-114)||(25738611-25738671)
chr6 (170-241)||(19655892-19655963)
chr6 (179-226)||(23491843-23491890)
chr6 (179-226)||(23497441-23497488)
chr6 (1-127)||(17229692-17229817)
chr6 (179-220)||(19773381-19773422)
chr6 (179-215)||(15705283-15705319)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-241)||(3628-3868)
[»] scaffold0010 (2 HSPs)
scaffold0010 (1-206)||(126958-127162)
scaffold0010 (67-116)||(60556-60605)
[»] scaffold0628 (2 HSPs)
scaffold0628 (1-194)||(4069-4260)
scaffold0628 (1-194)||(8629-8820)
[»] chr4 (35 HSPs)
chr4 (1-220)||(21061820-21062038)
chr4 (89-220)||(4615693-4615824)
chr4 (1-126)||(15612366-15612490)
chr4 (3-135)||(51992902-51993032)
chr4 (89-220)||(14933068-14933199)
chr4 (120-226)||(14629969-14630075)
chr4 (89-220)||(20899387-20899518)
chr4 (93-220)||(27028029-27028156)
chr4 (89-220)||(14942273-14942405)
chr4 (138-241)||(16026765-16026868)
chr4 (90-220)||(2584835-2584969)
chr4 (90-220)||(6511868-6512002)
chr4 (1-126)||(50160383-50160507)
chr4 (145-241)||(9638089-9638185)
chr4 (89-177)||(18229996-18230084)
chr4 (1-128)||(26050251-26050378)
chr4 (89-214)||(13446752-13446876)
chr4 (1-88)||(32466848-32466935)
chr4 (63-121)||(17333505-17333563)
chr4 (1-127)||(32306771-32306897)
chr4 (63-128)||(13591764-13591829)
chr4 (1-128)||(27996130-27996256)
chr4 (1-120)||(40907297-40907416)
chr4 (170-241)||(53631136-53631207)
chr4 (179-241)||(16026628-16026690)
chr4 (71-128)||(26789556-26789613)
chr4 (1-128)||(19738465-19738591)
chr4 (89-125)||(54798627-54798663)
chr4 (63-114)||(14825700-14825751)
chr4 (179-220)||(3485210-3485251)
chr4 (92-125)||(14280524-14280557)
chr4 (71-128)||(15791992-15792049)
chr4 (89-125)||(8574742-8574778)
chr4 (63-127)||(14852713-14852777)
chr4 (179-215)||(19734590-19734626)
[»] scaffold1695 (1 HSPs)
scaffold1695 (1-241)||(634-874)
[»] scaffold0409 (2 HSPs)
scaffold0409 (1-220)||(521-739)
scaffold0409 (1-220)||(8776-8994)
[»] scaffold0181 (1 HSPs)
scaffold0181 (89-220)||(34018-34149)
[»] scaffold0151 (1 HSPs)
scaffold0151 (1-122)||(30409-30530)
[»] scaffold0413 (1 HSPs)
scaffold0413 (91-215)||(10975-11099)
[»] scaffold0042 (1 HSPs)
scaffold0042 (4-207)||(28584-28785)
[»] scaffold0338 (1 HSPs)
scaffold0338 (5-177)||(11369-11541)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-125)||(95674-95798)
[»] scaffold2046 (1 HSPs)
scaffold2046 (89-220)||(404-535)
[»] scaffold0453 (1 HSPs)
scaffold0453 (89-220)||(3329-3460)
[»] scaffold0273 (1 HSPs)
scaffold0273 (89-220)||(6914-7045)
[»] scaffold0859 (1 HSPs)
scaffold0859 (1-241)||(3953-4193)
[»] scaffold1186 (1 HSPs)
scaffold1186 (120-226)||(854-960)
[»] scaffold0520 (1 HSPs)
scaffold0520 (85-227)||(83-225)
[»] scaffold0331 (2 HSPs)
scaffold0331 (2-128)||(12676-12802)
scaffold0331 (89-150)||(4064-4125)
[»] scaffold0321 (1 HSPs)
scaffold0321 (1-135)||(542-675)
[»] scaffold0293 (1 HSPs)
scaffold0293 (1-127)||(17721-17847)
[»] scaffold0005 (2 HSPs)
scaffold0005 (120-226)||(187308-187414)
scaffold0005 (63-114)||(13958-14009)
[»] scaffold0285 (1 HSPs)
scaffold0285 (7-220)||(19006-19219)
[»] scaffold0371 (1 HSPs)
scaffold0371 (139-226)||(16891-16978)
[»] scaffold0077 (3 HSPs)
scaffold0077 (1-123)||(3105-3225)
scaffold0077 (63-127)||(55522-55586)
scaffold0077 (179-220)||(33649-33690)
[»] scaffold0123 (2 HSPs)
scaffold0123 (89-177)||(1903-1991)
scaffold0123 (63-121)||(762-820)
[»] scaffold0429 (1 HSPs)
scaffold0429 (89-220)||(2617-2748)
[»] scaffold0309 (2 HSPs)
scaffold0309 (89-220)||(6200-6331)
scaffold0309 (89-220)||(8352-8483)
[»] scaffold0529 (1 HSPs)
scaffold0529 (120-241)||(7615-7736)
[»] scaffold0241 (4 HSPs)
scaffold0241 (119-212)||(4845-4938)
scaffold0241 (144-241)||(1663-1760)
scaffold0241 (179-241)||(5006-5068)
scaffold0241 (179-241)||(1853-1915)
[»] scaffold0716 (1 HSPs)
scaffold0716 (1-177)||(1216-1391)
[»] scaffold0117 (1 HSPs)
scaffold0117 (89-220)||(40852-40983)
[»] scaffold0107 (2 HSPs)
scaffold0107 (89-220)||(3172-3303)
scaffold0107 (63-121)||(9922-9980)
[»] scaffold0074 (1 HSPs)
scaffold0074 (1-128)||(8398-8525)
[»] scaffold0589 (1 HSPs)
scaffold0589 (4-135)||(3649-3781)
[»] scaffold0490 (1 HSPs)
scaffold0490 (92-220)||(5118-5246)
[»] scaffold0282 (1 HSPs)
scaffold0282 (1-127)||(17943-18069)
[»] scaffold0108 (1 HSPs)
scaffold0108 (1-127)||(3395-3521)
[»] scaffold0040 (2 HSPs)
scaffold0040 (1-129)||(22462-22590)
scaffold0040 (54-129)||(11362-11437)
[»] scaffold0379 (2 HSPs)
scaffold0379 (1-123)||(4394-4516)
scaffold0379 (54-127)||(14441-14514)
[»] scaffold0076 (1 HSPs)
scaffold0076 (63-121)||(24435-24493)
[»] scaffold2080 (1 HSPs)
scaffold2080 (63-128)||(598-663)
[»] scaffold0326 (1 HSPs)
scaffold0326 (90-212)||(8-134)
[»] scaffold0169 (1 HSPs)
scaffold0169 (63-127)||(29261-29325)
[»] scaffold0106 (1 HSPs)
scaffold0106 (63-127)||(19484-19548)
[»] scaffold1283 (1 HSPs)
scaffold1283 (170-241)||(1130-1201)
[»] scaffold0188 (1 HSPs)
scaffold0188 (89-220)||(264-395)
[»] scaffold0071 (1 HSPs)
scaffold0071 (60-114)||(14538-14593)
[»] scaffold0065 (1 HSPs)
scaffold0065 (1-136)||(53176-53309)
[»] scaffold0061 (2 HSPs)
scaffold0061 (170-241)||(15249-15320)
scaffold0061 (170-241)||(24307-24378)
[»] scaffold0780 (1 HSPs)
scaffold0780 (63-121)||(3165-3223)
[»] scaffold0708 (1 HSPs)
scaffold0708 (63-121)||(2265-2322)
[»] scaffold0485 (1 HSPs)
scaffold0485 (54-128)||(10369-10443)
[»] scaffold0356 (1 HSPs)
scaffold0356 (63-121)||(499-557)
[»] scaffold0260 (1 HSPs)
scaffold0260 (63-121)||(8352-8410)
[»] scaffold0220 (1 HSPs)
scaffold0220 (65-135)||(17791-17860)
[»] scaffold0081 (1 HSPs)
scaffold0081 (67-121)||(4538-4592)
[»] scaffold0009 (1 HSPs)
scaffold0009 (63-121)||(85770-85828)
[»] scaffold0750 (1 HSPs)
scaffold0750 (63-128)||(3813-3878)
[»] scaffold0026 (1 HSPs)
scaffold0026 (167-220)||(146032-146085)
[»] scaffold0054 (1 HSPs)
scaffold0054 (48-128)||(75651-75731)
[»] scaffold0022 (1 HSPs)
scaffold0022 (89-125)||(116637-116673)
[»] scaffold0439 (1 HSPs)
scaffold0439 (170-241)||(3737-3808)
[»] scaffold0047 (1 HSPs)
scaffold0047 (63-114)||(22510-22561)
[»] scaffold0039 (1 HSPs)
scaffold0039 (179-230)||(10641-10692)
[»] scaffold0357 (1 HSPs)
scaffold0357 (67-121)||(2919-2973)
[»] scaffold1633 (1 HSPs)
scaffold1633 (179-220)||(507-548)
[»] scaffold0575 (1 HSPs)
scaffold0575 (179-220)||(5998-6039)
[»] scaffold0292 (1 HSPs)
scaffold0292 (179-220)||(6852-6893)
[»] scaffold0232 (1 HSPs)
scaffold0232 (179-220)||(3609-3650)
[»] scaffold0207 (1 HSPs)
scaffold0207 (179-220)||(15221-15262)
[»] scaffold0205 (1 HSPs)
scaffold0205 (179-220)||(29909-29950)
[»] scaffold0146 (1 HSPs)
scaffold0146 (179-220)||(22357-22398)
[»] scaffold0019 (1 HSPs)
scaffold0019 (179-220)||(29457-29498)
[»] scaffold0018 (1 HSPs)
scaffold0018 (179-220)||(20991-21032)
[»] scaffold0012 (1 HSPs)
scaffold0012 (54-127)||(221036-221109)


Alignment Details
Target: scaffold0056 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 2 - 241
Target Start/End: Complemental strand, 66522 - 66283
Alignment:
Q  2 tagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctt 101  Q
    |||||||||||||| ||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  66522 tagcgagtagagtgactcgcctcacgagttactcagtggcagtcagccttacttagtgttcttgcgatctttgtcgcacgtgatgttctgagttggtctt 66423  T
Q  102 tggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgt 201  Q
    ||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  66422 tggggtaggaatgaaagttgtttataaaagtataatctttcagtgagtctgaattaatatgattattgttgttggttaatttgagatacatatatgatgt 66323  T
Q  202 ggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    |||||||||||||| |||| |||||| ||| ||| |||||    
T  66322 ggaaattgtatgatatagaaatattgttgttcatatcatt 66283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 165; Significance: 2e-88; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 109677 - 109437
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||| |||||||||||||||| ||    
T  109677 atagcgagtagagtggctcgcctcgcgagttactcagtggcagtcagccttacttagggttcttgcgatctttgtcacacgtgatgttatgagttggcct 109578  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    ||||||||| |||||||||||||||||||||||||  ||| | | ||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||    
T  109577 ttggggtagaaatggaagttgtttataaaggtatagccttacagagagtctgaattaaaatgattaatgttgttggttaatttgagatacatatattatg 109478  T
Q  201 tggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    |||||||||||||||||||||||||| |||| ||| |||||    
T  109477 tggaaattgtatgatgtagagatattaatgttcatatcatt 109437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 59771 - 59637
Alignment:
Q  90 tgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtct----gaattaatatgattattgttgttggtcaatttga 185  Q
    |||||||||  |||||||||||||||||||||||||||||||||||  ||||| |||| |||     ||||||||| |||  |||||||||| ||||  |    
T  59771 tgagttggttcttggggtaggaatggaagttgtttataaaggtatagcctttccgtgaatctaagctaattaatataattgatgttgttggttaattcaa 59672  T
Q  186 gatacatatattatgtggaaattgtatgatgtaga 220  Q
    | ||||||||||||||||||| |||||||| ||||    
T  59671 gctacatatattatgtggaaaatgtatgatataga 59637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 155; Significance: 2e-82; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 20469665 - 20469895
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    |||||||||||||||  || |||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||| |||| ||||||||||||||    
T  20469665 atagcgagtagagtggatcgcctcgcgagttactcagtggcagtcagcctcacttagagttcttgcgatctttgtcgcacgtgatattatgagttggtct 20469764  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    |||||| ||||| |||||||||||||||| |||||  ||||| | ||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||    
T  20469765 ttggggcaggaaaggaagttgtttataaatgtatagcctttcagagagtctgaattaaaatgattaatgttgttggttaatttgagatacatatattatg 20469864  T
Q  201 tggaaattgtatgatgtagagatattgatgt 231  Q
    ||||||||||||||| |||||||||||||||    
T  20469865 tggaaattgtatgatatagagatattgatgt 20469895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 4 - 177
Target Start/End: Original strand, 25250442 - 25250614
Alignment:
Q  4 gcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttg 103  Q
    |||||||||||| ||| |||| ||||| ||||||||| |||||||| | |||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  25250442 gcgagtagagtggctcgcctcacgagt-actcagtggcagtcagccctgcttagtgttcttgcaatctttgtcgcacgtgatgttatgagttggtctttg 25250540  T
Q  104 gggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggt 177  Q
    ||||||||||| ||||||||||||||||| ||  ||||||| || ||| |||||| ||||||||||||| ||||    
T  25250541 gggtaggaatgaaagttgtttataaaggtttagcctttcggagaatctaaattaaaatgattattgttgatggt 25250614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 4 - 177
Target Start/End: Original strand, 25314227 - 25314399
Alignment:
Q  4 gcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttg 103  Q
    |||||||||||| ||| |||| ||||| ||||||||| |||||||| | |||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  25314227 gcgagtagagtggctcgcctcacgagt-actcagtggcagtcagccctgcttagtgttcttgcaatctttgtcgcacgtgatgttatgagttggtctttg 25314325  T
Q  104 gggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggt 177  Q
    ||||||||||| ||||||||||||||||| ||  ||||||| || ||| |||||| ||||||||||||| ||||    
T  25314326 gggtaggaatgaaagttgtttataaaggtttagcctttcggagaatctaaattaaaatgattattgttgatggt 25314399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 21618581 - 21618820
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| |||||||||||||||||||| | ||| | ||  |||| ||||||||||||||| |||||| | | ||| | |||||||||    
T  21618581 atagcgagtagagtggctcgcctcgcgagttactcagtggaattcaactttgtttagggttcttgcgatctttttcgcacgtaacgttctaagttggtct 21618680  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    || |||||||||||||||||||||||||   | |  |  ||| |||||||||||||| ||||| |||| |||||||  ||||||||||| ||||||||||    
T  21618681 tt-gggtaggaatggaagttgtttataattatgttgttgttcagtgagtctgaattattatgaatattcttgttggataatttgagataaatatattatg 21618779  T
Q  201 tggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    || | |||||||||| |||| |||||| ||| ||| |||||    
T  21618780 tgaatattgtatgatatagaaatattgttgttcatatcatt 21618820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 29914786 - 29914562
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| |||||||||||||||||||| ||||| ||||  |||||||||||| |||| ||||||||| ||| ||| | |||| ||||    
T  29914786 atagcgagtagagtggctcgcctcgcgagttactcagtggcagtcaaccttgtttagtgttcttgtgatccttgtcgcacgtgacgttctaagttagtct 29914687  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    ||  |||||||||| |||| ||||||||   |||  |  ||| |||||||||||||||||||| | ||||| ||||   |||||||||||||||||||||    
T  29914686 ttcaggtaggaatgaaagtggtttataattatattgttgttcagtgagtctgaattaatatgaatgttgtttttggatgatttgagatacatatattatg 29914587  T
Q  201 tggaaattgtatgatgtagagatat 225  Q
     | | ||||||| || |||| ||||    
T  29914586 cgaatattgtataatatagaaatat 29914562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 22357585 - 22357716
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagat 188  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||   |||| |||| ||| || |||||| |||  |||||||||| ||||| || |    
T  22357585 atgagttggtccttggggtaggaatggaagttgtttataaaggtatagcttttcagtgaatctaaactaatataattgatgttgttggttaatttaagct 22357684  T
Q  189 acatatattatgtggaaattgtatgatgtaga 220  Q
    | |||||||||||||||| |||||||| ||||    
T  22357685 atatatattatgtggaaaatgtatgatataga 22357716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 8952679 - 8952808
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagat 188  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||  ||||| |||| ||| |  |||||| |||  |||||||||| ||||| || |    
T  8952679 atgagttggtcattggggtaggaatggaagttgtttataaaggtatagcctttcagtgaatctaagctaatataattgatgttgttggttaatttaagct 8952778  T
Q  189 acatatattatgtggaaattgtatgatgtaga 220  Q
    | ||||||  |||||||| |||||||| ||||    
T  8952779 atatatat--tgtggaaaatgtatgatataga 8952808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 126
Target Start/End: Complemental strand, 10953481 - 10953362
Alignment:
Q  6 gagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttggg 105  Q
    |||||||||||||| ||||||||| ||||||| || |||||  |||  |||| |||||||||||||||||||||| ||| ||| |||||| | | |||||    
T  10953481 gagtagagtgtctcgcctcgcgagctactcagcggcagtcaatcttgtttagggttcttgcgatctttgtcgcacgtgaagttgtgagtt-gaccttggg 10953383  T
Q  106 gtaggaatggaagttgtttat 126  Q
     |||||||||||||| |||||    
T  10953382 ataggaatggaagttatttat 10953362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 227
Target Start/End: Complemental strand, 20565803 - 20565696
Alignment:
Q  120 tgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtag 219  Q
    |||||||||  ||||  ||||||  ||||||||||||||||||| | |||||||||   |||||||||||||||||||||||| | |||||||||| |||    
T  20565803 tgtttataattgtattgtctttcaatgagtctgaattaatatgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatatag 20565704  T
Q  220 agatattg 227  Q
    | ||||||    
T  20565703 aaatattg 20565696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 25576632 - 25576758
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||||||| | | | ||| |  || |||||||  |||| ||| |||||||||||||||||| ||| ||||||||||| ||     
T  25576632 atagcgagtagagtggctcgcctcgcgggctgcacagagaaagacagccttgtttagggtt-ttgcgatctttgtcgcacgtgaggttatgagttgatcc 25576730  T
Q  101 ttggggtaggaatggaagttgtttataa 128  Q
    |||||||||||||||| |||| ||||||    
T  25576731 ttggggtaggaatggaggttgattataa 25576758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 23470094 - 23470021
Alignment:
Q  54 ttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttata 127  Q
    |||| |||||||||||||||||||||   |||||||||||||| || |||||||||||||||| |||| |||||    
T  23470094 ttagggttcttgcgatctttgtcgcaggagatgttatgagttgatcattggggtaggaatggaggttgattata 23470021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 20572170 - 20572112
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttg 121  Q
    |||||||| |||||||||  |||||||||||||| ||||||||||||||||||| ||||    
T  20572170 ttgcgatccttgtcgcacgagatgttatgagttgatctttggggtaggaatggaggttg 20572112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 25574307 - 25574372
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataa 128  Q
    |||||||||||||||||| ||| ||||||||||| || ||||||||||||| || |||| ||||||    
T  25574307 ttgcgatctttgtcgcacgtgaggttatgagttgatccttggggtaggaatagaggttgattataa 25574372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 25575500 - 25575565
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataa 128  Q
    |||||||||||||||||| ||| ||||||||||| || ||||||||||||| || |||| ||||||    
T  25575500 ttgcgatctttgtcgcacgtgaggttatgagttgatccttggggtaggaatagaggttgattataa 25575565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 5889016 - 5889063
Alignment:
Q  64 tgcgatctttgtcgcacatgatgttatgagttggtctttggggtagga 111  Q
    ||||||||||||||||| |||||||||||||||  |||||||||||||    
T  5889016 tgcgatctttgtcgcacgtgatgttatgagttgacctttggggtagga 5889063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 125
Target Start/End: Original strand, 18318942 - 18318978
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgttta 125  Q
    ||||||||||||||||||||||||||| |||||||||    
T  18318942 atgagttggtctttggggtaggaatggtagttgttta 18318978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 21731298 - 21731362
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttata 127  Q
    |||||||| |||||||||| ||||||||||||||  | |||||||||||||| | |||| |||||    
T  21731298 ttgcgatccttgtcgcacaagatgttatgagttgacccttggggtaggaatgaaggttgattata 21731362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 21809418 - 21809482
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttata 127  Q
    |||||||| |||||||||| ||||||||||||||  | |||||||||||||| | |||| |||||    
T  21809418 ttgcgatccttgtcgcacaagatgttatgagttgacccttggggtaggaatgaaggttgattata 21809482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 215
Target Start/End: Original strand, 21406320 - 21406438
Alignment:
Q  97 gtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatat 196  Q
    |||||||||||| ||||| ||||||| |||||  ||||  |||| |  ||| |||||||||||||||    |||||||||  ||||||||||  ||||||    
T  21406320 gtctttggggtatgaatgaaagttgtatataattgtattgtcttacaatgaatctgaattaatatgaagtatgttgttgggtaatttgagatgtatatat 21406419  T
Q  197 tatgtggaaattgtatgat 215  Q
    || ||| | ||||||||||    
T  21406420 tacgtgaatattgtatgat 21406438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 21328052 - 21328105
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatgga 116  Q
    ||||||||||||||||||  |||||||||||||| ||  ||||| |||||||||    
T  21328052 ttgcgatctttgtcgcacgagatgttatgagttgatccatgggggaggaatgga 21328105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 220
Target Start/End: Original strand, 24277230 - 24277364
Alignment:
Q  84 atgttatgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattg-ttgttggtcaatt 182  Q
    ||||| ||||||| |||| ||| ||||||||||||||||| || ||| ||||  ||||| | |||||||||| || ||||||| || ||||| || | ||    
T  24277230 atgttgtgagttgatctt-gggataggaatggaagttgttaat-aagttatagactttcagagagtctgaatcaa-atgattaatgattgttagttagtt 24277326  T
Q  183 tgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    | ||||| |||||||||| ||||| |||||||| ||||    
T  24277327 taagatatatatattatgaggaaaatgtatgatataga 24277364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 220
Target Start/End: Complemental strand, 24384983 - 24384849
Alignment:
Q  84 atgttatgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattg-ttgttggtcaatt 182  Q
    ||||| ||||||| |||| ||| ||||||||||||||||| || ||| ||||  ||||| | |||||||||| || ||||||| || ||||| || | ||    
T  24384983 atgttgtgagttgatctt-gggataggaatggaagttgttaat-aagttatagactttcagagagtctgaatcaa-atgattaatgattgttagttagtt 24384887  T
Q  183 tgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    | ||||| |||||||||| ||||| |||||||| ||||    
T  24384886 taagatatatatattatgaggaaaatgtatgatataga 24384849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 26740484 - 26740549
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataa 128  Q
    |||||||||||||||||   |||||| ||||||| || ||||||||||| |||| |||| ||||||    
T  26740484 ttgcgatctttgtcgcaagagatgttgtgagttgatccttggggtaggagtggaggttgattataa 26740549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 125
Target Start/End: Original strand, 20765993 - 20766029
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgttta 125  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  20765993 atgagttggtctttggggttggaatggtagttgttta 20766029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 153; Significance: 3e-81; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 27852090 - 27851850
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||  ||| ||| |||||||||||| | | ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  27852090 atagcgagtagagtagctcgcctagcgagttactcaatcgcagtcagccttacttagtgttcttgcgatctttgtcgcacgtgatgttctgagttggtct 27851991  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    |||||||||||||||||||| |||||||| ||||| |||||| ||||||||||||||||| |||||| ||||||||| ||||||| ||||||||||||||    
T  27851990 ttggggtaggaatggaagttctttataaatgtatagtctttcagtgagtctgaattaataagattatagttgttggttaatttgaaatacatatattatg 27851891  T
Q  201 tggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    ||||||||||||||| |||| |||||| ||| ||| |||||    
T  27851890 tggaaattgtatgatatagaaatattgttgttcatatcatt 27851850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 5 - 227
Target Start/End: Complemental strand, 44071999 - 44071777
Alignment:
Q  5 cgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttgg 104  Q
    |||| |||||| ||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  44071999 cgagcagagtggctcgcctcgcaagttactcagtggcagtcagccttacttagtgttcttgcgatctttgtcgcacgtgatgttctgagttggtctttgg 44071900  T
Q  105 ggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtgga 204  Q
    |||||||||| |||||||||||||  ||||  |||||| ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  44071899 ggtaggaatgtaagttgtttataattgtattgtctttcagtgagtctgaattaacatgattattgttgttggataatttgagatacatatattatgtgga 44071800  T
Q  205 aattgtatgatgtagagatattg 227  Q
    ||||||||||| |||| ||||||    
T  44071799 aattgtatgatatagaaatattg 44071777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 27860796 - 27860556
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| | | |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| | ||||| ||||||||||     
T  27860796 atagcgagtagagtggcacgcctcgcgagttactcagtagtagtcagccttacttagtgttcttgcgatctttatcgcacgtaatgttctgagttggtca 27860697  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    |||||||||||||||||||||||| |||| ||||| |||||  ||||||||||||||||||||||| |||||||||| || |||||||| ||||||||||    
T  27860696 ttggggtaggaatggaagttgtttttaaatgtatagtctttaagtgagtctgaattaatatgattaatgttgttggttaaattgagatagatatattatg 27860597  T
Q  201 tggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    ||||||||||||||| |||| |||||| ||| ||| |||||    
T  27860596 tggaaattgtatgatatagaaatattgttgttcatatcatt 27860556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 18390869 - 18391083
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| |||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||     
T  18390869 atagcgagtagagtggctcgcctcgcgagttactcagtggcagttagccttacttagtgttgttgcgatctttgtcgcacgtgatgttatgagttggtcc 18390968  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    |||||||||||||| ||||||||||||||||||||  ||||| |||||||| |||||||||||||||| |||||||| |||||||| |||||||||||||    
T  18390969 ttggggtaggaatgaaagttgtttataaaggtatagcctttcagtgagtctaaattaatatgattatttttgttggttaatttgagctacatatattatg 18391068  T
Q  201 tggaaattgtatgat 215  Q
    |||||| | ||||||    
T  18391069 tggaaaatatatgat 18391083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 25 - 241
Target Start/End: Complemental strand, 25141574 - 25141358
Alignment:
Q  25 gcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgttt 124  Q
    |||||||  ||||||| ||||||||||| ||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||| |||| |||||||||    
T  25141574 gcgagttgatcagtggcagtcagccttaattagtgttcttgcgatctttgtcgcacgtgacgttctgagttggtctttggggtagaaatgaaagttgttt 25141475  T
Q  125 ataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtagagata 224  Q
    ||||  ||||  ||||||  ||||||||||||||||| |||||||||||||   |||||||||||||||||||||||| | ||| |||||| |||| |||    
T  25141474 ataattgtattgtctttcactgagtctgaattaatataattattgttgttgaataatttgagatacatatattatgtgaatattttatgatatagaaata 25141375  T
Q  225 ttgatgtccatctcatt 241  Q
    ||| ||| ||| |||||    
T  25141374 ttgttgttcatatcatt 25141358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 22259484 - 22259258
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||  ||| ||| |||||||||| ||||| ||||||||||| |||| ||||||||||||||| |||||| ||  ||| | |||||||||    
T  22259484 atagcgagtagagtagctcgccttgcgagttacttagtggcagtcagccttatttagcgttcttgcgatctttttcgcacgtggcgttctaagttggtct 22259385  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    |||||||||||||| |||||||||||||  ||||  |||||| |||||||||||||||||||| |||||||| | |  |||||||||| |||||||||||    
T  22259384 ttggggtaggaatgaaagttgtttataattgtattgtctttcagtgagtctgaattaatatgaatattgttgctagataatttgagatgcatatattatg 22259285  T
Q  201 tggaaattgtatgatgtagagatattg 227  Q
    || | |||||||||| |||| ||||||    
T  22259284 tgaatattgtatgatatagaaatattg 22259258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 3539252 - 3539011
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||| |||||||||||||||| ||||| ||||  |||| ||||||||||||| |||||||| | |  || |||||||||||    
T  3539252 atagcgagtagagtggctcgccttgcgagttactcagtggcagtcaaccttgtttagggttcttgcgatctctgtcgcacgtaacattctgagttggtct 3539153  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtg-agtctgaattaatatgattattgttgttggtcaatttgagatacatatattat 199  Q
    |||||||||||||| |||||||||||||   |||  |  ||| ||| ||||||||||||||||| | ||||||||||  |||||||||||||||||||||    
T  3539152 ttggggtaggaatgaaagttgtttataattatattgttgttcagtgaagtctgaattaatatgaatgttgttgttggataatttgagatacatatattat 3539053  T
Q  200 gtggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    ||| | |||||||||| |||| |||||| ||| ||| |||||    
T  3539052 gtgaatattgtatgatatagaaatattgttgttcatatcatt 3539011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 202
Target Start/End: Complemental strand, 5985595 - 5985396
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| |||||||| ||||||||||| |||||||| |||| ||||| |||||||||||| ||| || ||| |||||||||||||||    
T  5985595 atagcgagtagagtgactcgcctcgcga-ttactcagtggcagtcagccctact-agtgtccttgcgatctttttcgaacgtgaagttatgagttggtct 5985498  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    |||||||||||||||||||||||||||||||| ||  ||||| | ||  || | |||| ||||||| |||||||||| ||| ||| || |||||||||||    
T  5985497 ttggggtaggaatggaagttgtttataaaggtttagcctttcagagaacctaagttaaaatgattaatgttgttggttaatgtgaaattcatatattatg 5985398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 24 - 175
Target Start/End: Original strand, 10897102 - 10897253
Alignment:
Q  24 cgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtt 123  Q
    ||||||||||| ||||  |||||||||||| ||| ||||||||||||| |||||||| |||| || ||||||||||||||||||| ||| | ||||||||    
T  10897102 cgcgagttacttagtgacagtcagccttacctagagttcttgcgatctgtgtcgcacgtgatattctgagttggtctttggggtaagaaggaaagttgtt 10897201  T
Q  124 tataaaggtataatctttcggtgagtctgaattaatatgattattgttgttg 175  Q
    |||||   ||| | ||||| |||||||||||||||||||| |||||||||||    
T  10897202 tataattatattagctttcagtgagtctgaattaatatgaatattgttgttg 10897253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 25045516 - 25045384
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||||||||| |||||||||| ||||| ||||  |||| ||||||||||||||||||| || ||||||| ||||||| ||     
T  25045516 atagcgagtagagtggctcgcctcgcgagctactcagtggcagtca-ccttgtttagggttcttgcgatctttgtcgtacgtgatgttgtgagttgatc- 25045419  T
Q  101 ttggggtaggaatggaagttgtttataaaggtata 135  Q
    ||||| |||||||| ||||||||||| ||| ||||    
T  25045418 ttgggttaggaatgtaagttgtttattaagttata 25045384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 196
Target Start/End: Original strand, 6477919 - 6478026
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagat 188  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||  ||||| |||| ||| || |||||| |||  |||||||||| ||||| || |    
T  6477919 atgagttggtccttggggtaggaatggaagttgtttataaaggtatagcctttcagtgaatctaaactaatataattgatgttgttggttaatttaagct 6478018  T
Q  189 acatatat 196  Q
    | ||||||    
T  6478019 atatatat 6478026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 14693723 - 14693601
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||  |||||| ||||||| ||||  || || ||||  |||| |||||||||||| |  ||||| |||||||| ||||||||||     
T  14693723 atagcgagtagagtggcttgcctcgccagttacttagtgacagacaaccttgtttagggttcttgcgatcctcttcgcatatgatgttctgagttggtcc 14693624  T
Q  101 ttggggtaggaatggaagttgtt 123  Q
    |||||||||||||| ||||||||    
T  14693623 ttggggtaggaatgaaagttgtt 14693601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 226
Target Start/End: Complemental strand, 25141289 - 25141183
Alignment:
Q  120 tgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtag 219  Q
    |||||||||  ||||  |||||| |||||||| |||||| |||| |||||||||||   |||||||||||||||||||||||| | ||| |||||| |||    
T  25141289 tgtttataattgtattgtctttcagtgagtctaaattaacatgaatattgttgttgaataatttgagatacatatattatgtgaatattatatgatatag 25141190  T
Q  220 agatatt 226  Q
    | |||||    
T  25141189 aaatatt 25141183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 23005033 - 23004968
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataa 128  Q
    ||||||||||||||||||  |||||||||||||| || || ||||||||||||| ||||| |||||    
T  23005033 ttgcgatctttgtcgcacgggatgttatgagttgatcctttgggtaggaatggaggttgtatataa 23004968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 121
Target Start/End: Original strand, 18546762 - 18546840
Alignment:
Q  42 agtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttg 121  Q
    ||||||||||  |||| ||| ||||||||||||||||||   ||||||||||||| || |||||||||||||||| ||||    
T  18546762 agtcagccttgtttagggtt-ttgcgatctttgtcgcacgaaatgttatgagttgatccttggggtaggaatggaggttg 18546840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 42 - 128
Target Start/End: Complemental strand, 23287666 - 23287581
Alignment:
Q  42 agtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataa 128  Q
    ||||||||||  |||| ||| ||||||||||||||||||  |||||| ||||||| || || ||||||||||||| |||| ||||||    
T  23287666 agtcagccttgtttagggtt-ttgcgatctttgtcgcacgagatgttgtgagttgatccttagggtaggaatggaggttgattataa 23287581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 21243026 - 21242914
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||||||||| | | ||| |  || |||||||  |||| ||| |||||||||||||| |||  |||||||||||||| ||     
T  21243026 atagcgagtagagtggctcgcctcgcgagctgcacagagacagacagccttgtttagggtt-ttgcgatctttgtctcacgagatgttatgagttgatcc 21242928  T
Q  101 ttggggtaggaatg 114  Q
    || |||||||||||    
T  21242927 ttagggtaggaatg 21242914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 34137232 - 34137159
Alignment:
Q  54 ttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttata 127  Q
    |||| |||||||||||||||||||||  ||| |||||||| ||  | |||||||||||||||| |||| |||||    
T  34137232 ttagggttcttgcgatctttgtcgcatgtgaggttatgagatgacccttggggtaggaatggaggttgattata 34137159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 122
Target Start/End: Original strand, 20520030 - 20520089
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgt 122  Q
    ||||||||||||| ||||  |||||||||||||  || |||||||||||||||| |||||    
T  20520030 ttgcgatctttgttgcacgagatgttatgagtttatccttggggtaggaatggaggttgt 20520089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 26392664 - 26392606
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttg 121  Q
    ||||||||||||||| |   |||||||||||||| || |||||||||||||||| ||||    
T  26392664 ttgcgatctttgtcgtaggagatgttatgagttgatccttggggtaggaatggaggttg 26392606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 9784962 - 9784921
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  9784962 aatttgagatacatatattatgtgaatattgtatgatataga 9784921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 43947210 - 43947274
Alignment:
Q  64 tgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataa 128  Q
    |||||| |||||||||| ||| |||||||||||  | || ||||||||||||| |||| ||||||    
T  43947210 tgcgatttttgtcgcacgtgaggttatgagttgacccttagggtaggaatggaggttgattataa 43947274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 150; Significance: 2e-79; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 202
Target Start/End: Original strand, 36727694 - 36727895
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  36727694 atagcgagtagagtggctcgcctcgcgagttactcagtgacagtcagccttacttagtgttcttgcgatctttgtcgcacgtgatgttatgagtttgtct 36727793  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    ||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||| |||||||||||   ||||||||||||||||||||||    
T  36727794 ttggggtaggaatggaagttgtttataaatgtatagtctttcagtgagtctgaattaatatgaatattgttgttgaataatttgagatacatatattatg 36727893  T
Q  201 tg 202  Q
    ||    
T  36727894 tg 36727895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 31723149 - 31723389
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| |||||||||||||||||||| || | |||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  31723149 atagcgagtagagtggctcgcctcgcgagttactcagtggcagacggccttacttagtgttcttgcgatctttgtcgcacgtgatgttctgagttggtct 31723248  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    ||||||||||||| ||||||||||||||| ||||| | |||| |||||||||||||||||||| ||||||||||    ||||||||||||||||||||||    
T  31723249 ttggggtaggaattgaagttgtttataaatgtatagtatttcagtgagtctgaattaatatgaatattgttgttaaataatttgagatacatatattatg 31723348  T
Q  201 tggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    || | |||||||||| |||| |||||| ||| ||| |||||    
T  31723349 tgaatattgtatgatatagaaatattgttgttcatatcatt 31723389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 22318495 - 22318735
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||| ||||||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||| ||| ||||||||| |    
T  22318495 atagctagtagagtggctcgcctcgcgagttactcagtggcagtcagccttatttagtgttcttgcgatctttgtcgcacgtgacgttctgagttggttt 22318594  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    |||||||||||||| |||||| ||||||  ||||  |||||| |||||||||||||||||||| ||||||||||||  |||||||||||||||||||| |    
T  22318595 ttggggtaggaatgaaagttgcttataattgtattgtctttcagtgagtctgaattaatatgaatattgttgttggataatttgagatacatatattacg 22318694  T
Q  201 tggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    |||| |||||||||| |||| |||||| ||| ||| |||||    
T  22318695 tggatattgtatgatatagaaatattgttgttcatatcatt 22318735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 17907508 - 17907727
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| |||  ||||||||||||||||||| ||||||||||| |||| |||||||||||||||||| ||| |||||||||||||||||||    
T  17907508 atagcgagtagagtggctcggctcgcgagttactcagtggcagtcagccttagttagagttcttgcgatctttgtcacacctgatgttatgagttggtct 17907607  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    ||||||||| |||||||||||||||||||||||||  ||||| |||| ||| |||||| ||||||| |||||||||| ||| ||| ||||||||||||||    
T  17907608 ttggggtagaaatggaagttgtttataaaggtatagcctttcagtgaatctaaattaaaatgattaatgttgttggttaatgtgaaatacatatattatg 17907707  T
Q  201 tggaaattgtatgatgtaga 220  Q
    ||||||  ||||||| ||||    
T  17907708 tggaaaaagtatgatataga 17907727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 4 - 220
Target Start/End: Complemental strand, 17218097 - 17217881
Alignment:
Q  4 gcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttg 103  Q
    |||||||||||| ||| |||||||||||||||||||| |||| ||||||||||| |||||| |||||||| |||||| |||||||||||||||||||||     
T  17218097 gcgagtagagtggctcgcctcgcgagttactcagtggcagtcggccttacttagggttctttcgatctttatcgcacgtgatgttatgagttggtctttc 17217998  T
Q  104 gggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtgg 203  Q
    |||||||||||||||||||||  |||||||||| || || | ||||||| ||| | ||||||| |||||| ||| | |||||  ||||||||||||||||    
T  17217997 gggtaggaatggaagttgttttcaaaggtataacctctcagagagtctgtatttaaatgattaatgttgtcggttattttgaattacatatattatgtgg 17217898  T
Q  204 aaattgtatgatgtaga 220  Q
    ||| |||||||| ||||    
T  17217897 aaagtgtatgatataga 17217881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 23947711 - 23947494
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| |||||||||| ||||||||| ||||| ||||  |||| ||||||| |||||||||||||| ||||| |  ||||||||||    
T  23947711 atagcgagtagagtggctcgcctcgcgagtaactcagtggcagtcaaccttgtttagggttcttgggatctttgtcgcacgtgatgctcagagttggtct 23947612  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    |||||||||||||| |||||||||||||   |||  |  ||| ||||||||||||||| ||||||| |||| ||||| || ||||| |||||||||||||    
T  23947611 ttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgtttttggttaa-ttgagctacatatattatg 23947513  T
Q  201 tggaaattgtatgatgtaga 220  Q
    |||||| |||||||| ||||    
T  23947512 tggaaa-tgtatgatataga 23947494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 28 - 220
Target Start/End: Complemental strand, 22244888 - 22244697
Alignment:
Q  28 agttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttata 127  Q
    ||||||||||||| ||||| ||||  |||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||    
T  22244888 agttactcagtggcagtcaaccttgtttagggttcttgcgatctttgtcgcacgtgatgttctgagttggtctttggggtaggaatgaaagttgtttata 22244789  T
Q  128 aaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |   |||  |  ||| ||||||||||||||| ||||||| |||||||||| || || || |||||||||||||| |||| |||||||| ||||    
T  22244788 attatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttaagctacatatattatgttgaaaatgtatgatataga 22244697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 45470998 - 45471238
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| |||||||||||||||||||| ||||| ||||  ||||| |||||||||||||| ||| || ||| |||  |||||||||     
T  45470998 atagcgagtagagtggctcgcctcgcgagttactcagtggcagtcaaccttgtttagttttcttgcgatctttttcggacgtgacgttccgagttggtcc 45471097  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    ||||| |||||||| |||||||| ||||   |||  |  |   |||||||||||||||||| | ||||| ||||||  ||||||||||||||||||||||    
T  45471098 ttgggataggaatgaaagttgttcataattatattgttgtgtagtgagtctgaattaatataaatattgatgttggataatttgagatacatatattatg 45471197  T
Q  201 tggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    || | |||||||||| |||| |||||| ||| ||| |||||    
T  45471198 tgaatattgtatgatatagaaatattgttgttcatatcatt 45471238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 23889148 - 23889018
Alignment:
Q  90 tgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagata 189  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||| |||| ||| || ||||||||||| |||||||||| |||||||| ||    
T  23889148 tgagttggactttggggtaggaatggaagttgtttataaaagtataacctttcagtgaatctaaactaatatgattaatgttgttggttaatttgagcta 23889049  T
Q  190 catatattatgtggaaattgtatgatgtaga 220  Q
    ||||||||||||||||| |||||||| ||||    
T  23889048 catatattatgtggaaaatgtatgatataga 23889018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 9672 - 9546
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||||||||| |||||||||| ||||| ||||  |||| |||||||||||| ||||||||||||||||| |||||| |||     
T  9672 atagcgagtagagtggctcgcctcgcgagctactcagtggcagtcaaccttgtttagggttcttgcgatc-ttgtcgcacatgatgttctgagttagtcg 9574  T
Q  101 ttggggtaggaatggaagttgtttataa 128  Q
    || ||||||||||| |||||||||||||    
T  9573 ttagggtaggaatgaaagttgtttataa 9546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 20024876 - 20025035
Alignment:
Q  54 ttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctga 153  Q
    ||||||||||||| |||||| |||||| ||| |||  ||||||||| ||||||||||||||||||||||| ||||   |||  |  |   ||||||||||    
T  20024876 ttagtgttcttgcaatctttttcgcacgtgacgttccgagttggtccttggggtaggaatggaagttgttcataattatatttttgtgtagtgagtctga 20024975  T
Q  154 attaatatgattattgttgttggtcaatttgagatacatatattatgtggaaattgtatg 213  Q
    |||||||||| ||||| ||||||  |||||||||||||||||||||||| | ||||||||    
T  20024976 attaatatgaatattgatgttggataatttgagatacatatattatgtgaatattgtatg 20025035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 215
Target Start/End: Original strand, 22584362 - 22584488
Alignment:
Q  90 tgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatat-gattattgttgttggtcaatttgagat 188  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||| ||| || |||||| | ||| |||||||||| ||| | || |    
T  22584362 tgagttggtatttggggtaggaatggaagttgtttataaaggtatagtctttcagtgaatctaaactaatatggtttaatgttgttggttaatctaagct 22584461  T
Q  189 acatatattatgtggaaattgtatgat 215  Q
    |||||||||||||| ||| ||||||||    
T  22584462 acatatattatgtgaaaaatgtatgat 22584488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 23900643 - 23900731
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgtta 89  Q
    |||| ||| |||||| ||| ||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  23900643 atagtgaggagagtggctcgcctcgtgagttactcagtggcagtcaaccttacttagtgttcttgcgatctttgtcgcacgtgatgtta 23900731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 19699579 - 19699446
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||| |||||  ||| ||||| ||||| ||||  |||| |||||||||||||||||||||| ||||||| ||||||| ||     
T  19699579 atagcgagtagagtggctcgccttgcgagcgacttagtggcagtcaaccttgtttagggttcttgcgatctttgtcgcacgtgatgttgtgagttgatc- 19699481  T
Q  101 ttggggtaggaatggaagttgtttataaaggtata 135  Q
    || || |||||||||||||||||||| ||| ||||    
T  19699480 ttaggataggaatggaagttgtttattaagttata 19699446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 241
Target Start/End: Original strand, 36728008 - 36728105
Alignment:
Q  144 gtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    |||||||||||||||||||| |||||||||||   |||||||||||||||||||||||| | |||||||||| |||| |||||| ||| ||| |||||    
T  36728008 gtgagtctgaattaatatgaatattgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcatt 36728105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 241
Target Start/End: Original strand, 31723458 - 31723579
Alignment:
Q  120 tgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtag 219  Q
    |||||||||  ||||  |||||| |||||| ||||||||||||| |||||||||||   ||||||||||||||||||||| || | |||||||||| |||    
T  31723458 tgtttataattgtattgtctttcagtgagtatgaattaatatgaatattgttgttgaataatttgagatacatatattatctgaatattgtatgatatag 31723557  T
Q  220 agatattgatgtccatctcatt 241  Q
    | |||||| ||| ||| |||||    
T  31723558 aaatattgttgttcatatcatt 31723579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 22381510 - 22381637
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||||||||  | | |||||  || |||||||  |||| ||||||||||||||||||||||| ||||||||| |||  ||     
T  22381510 atagcgagtagagtggctcgcctcgcgaactgcacagtgtcagacagccttgtttagggttcttgcgatctttgtcgcacaagatgttatgggtttatcc 22381609  T
Q  101 ttggggtaggaatggaagttgtttataa 128  Q
    ||||||||||||| || |||| ||||||    
T  22381610 ttggggtaggaatcgaggttgattataa 22381637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 22525860 - 22525746
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||||||||| | | ||| |  ||||||||||  |||| ||| ||||||||||||||||||  |||||||||||||| ||     
T  22525860 atagcgagtagagtggctcgcctcgcgagctgcacagagacagtcagccttgtttagggtt-ttgcgatctttgtcgcacgagatgttatgagttgatca 22525762  T
Q  101 ttggggtaggaatgga 116  Q
    ||||||||||||||||    
T  22525761 ttggggtaggaatgga 22525746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 22252941 - 22253067
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    |||||||||| |||| ||| |||||||||  ||  ||||  || ||||||   |||| |||||||||||||||||||||| |||||||||||||||  |     
T  22252941 atagcgagtatagtggctcgcctcgcgagcgacagagtgccagacagcctcgtttagggttcttgcgatctttgtcgcacgtgatgttatgagttgaccc 22253040  T
Q  101 ttggggtaggaatggaagttgtttata 127  Q
    |||||||||||||||| |||| |||||    
T  22253041 ttggggtaggaatggaggttgattata 22253067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 25848986 - 25849118
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||||||||| ||||||||||   ||| ||||  |||| |||||||||||||||||||||| ||||||| ||||||  | |    
T  25848986 atagcgagtagagtggctcacctcgcgagctactcagtggccatcaaccttg-ttagggttcttgcgatctttgtcgcacgtgatgttgtgagttaat-t 25849083  T
Q  101 ttggggtaggaatggaagttgtttataaaggtata 135  Q
    ||  | |||||||||||||||||||| ||| ||||    
T  25849084 ttaagataggaatggaagttgtttattaagttata 25849118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 20501877 - 20502003
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||||||||| | | |||||  |  |||||||  |||| |||||||||||| ||||||||| ||| |||||||| ||  |     
T  20501877 atagcgagtagagtggctcgcctcgcgagctgcacagtgtcaaacagccttgtttagggttcttgcgatccttgtcgcacgtgaggttatgagatgaccc 20501976  T
Q  101 ttggggtaggaatggaagttgtttata 127  Q
    |||||||||||||||| |||| |||||    
T  20501977 ttggggtaggaatggaggttgattata 20502003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 22963257 - 22963321
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttata 127  Q
    ||||||||||||||||||  ||||||||||||||  | ||||||||||||||||||||| |||||    
T  22963257 ttgcgatctttgtcgcacgagatgttatgagttgacccttggggtaggaatggaagttgattata 22963321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 17085930 - 17086055
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||||||||| | | || ||  || |||||||  |||| ||| ||||||||||||||||||  ||||||||||||||  |     
T  17085930 atagcgagtagagtggctcgcctcgcgagctgcacattgtcagacagccttgtttagagtt-ttgcgatctttgtcgcacgagatgttatgagttgaccc 17086028  T
Q  101 ttggggtaggaatggaagttgtttata 127  Q
    || ||||||||||||| |||| |||||    
T  17086029 ttagggtaggaatggaggttgattata 17086055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 20533246 - 20533304
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttg 121  Q
    ||||||||||||||||||  |||||||||||||| || |||||||||||||||| ||||    
T  20533246 ttgcgatctttgtcgcacgagatgttatgagttgatccttggggtaggaatggaggttg 20533304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 23668092 - 23668027
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataa 128  Q
    ||||||||||||||||||  ||||||||||||||  | |||||||||||||||| |||| ||||||    
T  23668092 ttgcgatctttgtcgcacgagatgttatgagttgacccttggggtaggaatggaggttgattataa 23668027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 37515988 - 37515923
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataa 128  Q
    |||||||| |||||||||  |||||||| ||||| || |||||||||||||||| |||||||||||    
T  37515988 ttgcgatccttgtcgcacgagatgttataagttgatccttggggtaggaatggaggttgtttataa 37515923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 5760922 - 5760851
Alignment:
Q  170 ttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    |||||||  |||||||||||||||||||||||| | |||||||||| |||| |||||| ||| ||| |||||    
T  5760922 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcatt 5760851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 14103062 - 14103120
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttg 121  Q
    ||||||||||||||||||  ||||||| |||||| || |||||||||||||||| ||||    
T  14103062 ttgcgatctttgtcgcacgagatgttacgagttgatccttggggtaggaatggaggttg 14103120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 17439343 - 17439401
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttg 121  Q
    ||||||||||||||||||  ||| |||||||||| || |||||||||||||||| ||||    
T  17439343 ttgcgatctttgtcgcacgagatattatgagttgatccttggggtaggaatggaggttg 17439401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 40492690 - 40492755
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataa 128  Q
    ||||||||||||||||||  |||||| ||||||| || ||| |||||||||||| ||||| |||||    
T  40492690 ttgcgatctttgtcgcacgagatgttgtgagttgatccttgtggtaggaatggaggttgtatataa 40492755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 23418840 - 23418753
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgtt 88  Q
    ||||||||||||||| ||| | ||||| | |||||||||  | ||| ||||  |||| |||||||||||| |||||||| ||||||||    
T  23418840 atagcgagtagagtggctcgcttcgcgggctactcagtgacattcaaccttgtttagggttcttgcgatccttgtcgcatatgatgtt 23418753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 111
Target Start/End: Complemental strand, 39834112 - 39834065
Alignment:
Q  64 tgcgatctttgtcgcacatgatgttatgagttggtctttggggtagga 111  Q
    ||||||||||||| ||| |||||||||||||||  |||||||||||||    
T  39834112 tgcgatctttgtcccacgtgatgttatgagttgacctttggggtagga 39834065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 123
Target Start/End: Complemental strand, 23450881 - 23450847
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtt 123  Q
    ||||||||||| |||||||||||||||||||||||    
T  23450881 atgagttggtccttggggtaggaatggaagttgtt 23450847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 123
Target Start/End: Complemental strand, 34301959 - 34301925
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtt 123  Q
    ||||||||||| |||||||||||||||||||||||    
T  34301959 atgagttggtccttggggtaggaatggaagttgtt 34301925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 6102464 - 6102505
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  6102464 aatttgagatacatatattatgtgaatattgtatgatataga 6102505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 19154723 - 19154776
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatgga 116  Q
    ||||||||||||||||||  ||||||| |||||| || |||| |||||||||||    
T  19154723 ttgcgatctttgtcgcacgagatgttacgagttgatccttggtgtaggaatgga 19154776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 21346071 - 21346112
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  21346071 aatttgagatacatatattatgtgaatattgtatgatataga 21346112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 125
Target Start/End: Original strand, 26222945 - 26222981
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgttta 125  Q
    |||||||||||||| |||||||||||| |||||||||    
T  26222945 atgagttggtctttcgggtaggaatggtagttgttta 26222981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 149; Significance: 8e-79; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 5 - 241
Target Start/End: Complemental strand, 13302295 - 13302059
Alignment:
Q  5 cgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttgg 104  Q
    ||||||||||| ||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| || |||||||||||||||    
T  13302295 cgagtagagtggctcgcctcacgagttactcagtggcagtcagccttacttagtgttcttgcgatctttgtcgcacttgattttctgagttggtctttgg 13302196  T
Q  105 ggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtgga 204  Q
    |||| |||||||||||| ||||||| ||||| |||||| |||||||||||||||||||||| ||||||||| | ||||||||||  ||||||||||||||    
T  13302195 ggtatgaatggaagttgattataaatgtatagtctttcagtgagtctgaattaatatgattgttgttgttgtttaatttgagatctatatattatgtgga 13302096  T
Q  205 aattgtatgatgtagagatattgatgtccatctcatt 241  Q
    ||||||||||| |||| |||||| ||| ||| |||||    
T  13302095 aattgtatgatatagaaatattgttgttcatatcatt 13302059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 5 - 202
Target Start/End: Complemental strand, 42697227 - 42697031
Alignment:
Q  5 cgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttgg 104  Q
    ||||||||||| ||| |||||||||| ||||||||| || ||| | ||||||||||||||||||||||| | |||| | ||||||||||||| || ||||    
T  42697227 cgagtagagtggctcgcctcgcgagt-actcagtggcagacagtcctacttagtgttcttgcgatcttttttgcacgttatgttatgagttgatccttgg 42697129  T
Q  105 ggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtg 202  Q
    |||||||||||||||||||||||||||| ||  ||||| | || ||| |||| |  |||||| |||| ||| | ||| ||| ||||||||||||||||    
T  42697128 ggtaggaatggaagttgtttataaaggtttagcctttcagagaatctaaattgaactgattaatgttcttgattaatgtgaaatacatatattatgtg 42697031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 51476400 - 51476270
Alignment:
Q  90 tgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagata 189  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||||| ||||| |||| ||| || ||||||||||| |||||||||| ||||| || ||    
T  51476400 tgagttggtctttggggtaagaatgaatgttgtttataaaggtataacctttcagtgaatctaaactaatatgattaatgttgttggttaatttaagcta 51476301  T
Q  190 catatattatgtggaaattgtatgatgtaga 220  Q
    ||||||||||||||||| |||||||| ||||    
T  51476300 catatattatgtggaaaatgtatgatataga 51476270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 135
Target Start/End: Complemental strand, 45754968 - 45754838
Alignment:
Q  4 gcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttg 103  Q
    |||||||| ||| ||| ||||||||| |||||||||| ||||| ||||  |||| |||||||||||||||||||||  ||||||| ||||||| || |||    
T  45754968 gcgagtagtgtggctcgcctcgcgagctactcagtggcagtcaaccttgtttagggttcttgcgatctttgtcgcatgtgatgttgtgagttgatc-ttg 45754870  T
Q  104 gggtaggaatggaagttgtttataaaggtata 135  Q
    || |||||||||||||||||||| ||| ||||    
T  45754869 ggataggaatggaagttgtttattaagttata 45754838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 52983570 - 52983439
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagat 188  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||   ||||  ||| ||| |  |||||| |||  |||||||||| ||||| || |    
T  52983570 atgagttggtccttggggtaggaatggaagttgtttataaaggtatagcttttcactgaatctaagctaatataattgatgttgttggttaatttaagct 52983471  T
Q  189 acatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||| |||||||| ||||    
T  52983470 acatatattatgtggaaaatgtatgatataga 52983439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 18824031 - 18823900
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagat 188  Q
    ||||||||||| || ||||||||||||||||||||||| |||| ||| |||||| |||| ||| |  |||||| |||  |||||||||| ||||| || |    
T  18824031 atgagttggtccttagggtaggaatggaagttgtttattaaggcatagtctttcagtgaatctaagctaatataattgatgttgttggttaatttaagct 18823932  T
Q  189 acatatattatgtggaaattgtatgatgtaga 220  Q
    | |||||||||||||||| | |||||| ||||    
T  18823931 atatatattatgtggaaaatatatgatataga 18823900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 13528417 - 13528552
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtct----gaattaatatgattattgttgttggtcaatttg 184  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||  ||||| |||| |||     ||||||||| |||  |||||||||| ||||      
T  13528417 atgagttggtccttggggtaggaatggaagttgtttataaaagtatagcctttcagtgaatctaagctaattaatataattgatgttgttggttaattca 13528516  T
Q  185 agatacatatattatgtggaaattgtatgatgtaga 220  Q
    || || |||||||||||||||| |||||||| ||||    
T  13528517 agctatatatattatgtggaaaatgtatgatataga 13528552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 18270689 - 18270555
Alignment:
Q  90 tgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctga----attaatatgattattgttgttggtcaatttga 185  Q
    |||||||||  |||||||| |||||||||||||||||||||||| |  ||||  |||| ||| |    |||||||| |||  |||||||||| ||||  |    
T  18270689 tgagttggttcttggggtaagaatggaagttgtttataaaggtacagccttttcgtgaatctaagctaattaatataattgatgttgttggttaattcaa 18270590  T
Q  186 gatacatatattatgtggaaattgtatgatgtaga 220  Q
    | ||||||||||||||||||| |||||||| ||||    
T  18270589 gctacatatattatgtggaaaatgtatgatataga 18270555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 18275343 - 18275209
Alignment:
Q  90 tgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctga----attaatatgattattgttgttggtcaatttga 185  Q
    |||||||||  |||||||| |||||||||||||||||||||||| |  ||||  |||| ||| |    |||||||| |||  |||||||||| ||||  |    
T  18275343 tgagttggttcttggggtaagaatggaagttgtttataaaggtacagccttttcgtgaatctaagctaattaatataattgatgttgttggttaattcaa 18275244  T
Q  186 gatacatatattatgtggaaattgtatgatgtaga 220  Q
    | ||||||||||||||||||| |||||||| ||||    
T  18275243 gctacatatattatgtggaaaatgtatgatataga 18275209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 22124630 - 22124517
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| |||| |||| | | |||||  || || ||||  |||| |||||||||||| ||||||||| ||| ||||||||||| ||     
T  22124630 atagcgagtagagtggctcgcctcacgagctgcacagtgtcagacatccttgtttagggttcttgcgatccttgtcgcacgtgaggttatgagttgatcc 22124531  T
Q  101 ttggggtaggaatg 114  Q
    ||||||||||||||    
T  22124530 ttggggtaggaatg 22124517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 24726829 - 24726742
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgtt 88  Q
    ||||||||||||||| ||| ||||||||| |||||||||  ||| | ||||  |||| |||||||||||| ||||||||| |||||||    
T  24726829 atagcgagtagagtgactcgcctcgcgagctactcagtgccagttaaccttgtttagggttcttgcgatccttgtcgcacgtgatgtt 24726742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 126
Target Start/End: Original strand, 19761824 - 19761889
Alignment:
Q  60 ttcttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttat 126  Q
    ||||||||||||||||||||||||||||| ||||||| || ||| | |||||| |||||||||||||    
T  19761824 ttcttgcgatctttgtcgcacatgatgttgtgagttgatc-ttgagataggaaaggaagttgtttat 19761889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 52940715 - 52940780
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataa 128  Q
    ||||||||||||||||||  |||||||||||||| || |||||||||||||| | |||| ||||||    
T  52940715 ttgcgatctttgtcgcacgagatgttatgagttgatccttggggtaggaatgaaggttgattataa 52940780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 26065222 - 26065163
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgt 122  Q
    ||||||||||||||||||  |||||||||||||  || |||||||||||||||| |||||    
T  26065222 ttgcgatctttgtcgcacgagatgttatgagtttatccttggggtaggaatggatgttgt 26065163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 20346087 - 20346029
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttg 121  Q
    ||||||||||||||||||  |||||||||||||  || |||||||||||||||| ||||    
T  20346087 ttgcgatctttgtcgcacgagatgttatgagttaatccttggggtaggaatggaggttg 20346029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 27653060 - 27653118
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttg 121  Q
    ||||||||||||| ||||  |||||||||||||| || |||||||||||||||| ||||    
T  27653060 ttgcgatctttgttgcacgagatgttatgagttgatccttggggtaggaatggaggttg 27653118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 21043110 - 21043183
Alignment:
Q  54 ttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttata 127  Q
    |||| ||||||||||||||||| |||  ||| |||||||||||  | |||||||||||||||| |||| |||||    
T  21043110 ttagggttcttgcgatctttgttgcatgtgaggttatgagttgacccttggggtaggaatggaggttgattata 21043183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 128
Target Start/End: Complemental strand, 47190883 - 47190819
Alignment:
Q  64 tgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataa 128  Q
    |||||| |||||||||| ||| ||||| ||||| || |||||||||||||||| |||| ||||||    
T  47190883 tgcgatttttgtcgcacgtgaggttataagttgatccttggggtaggaatggaggttgattataa 47190819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 28194289 - 28194336
Alignment:
Q  64 tgcgatctttgtcgcacatgatgttatgagttggtctttggggtagga 111  Q
    ||||||||||||||||| |||||||||||||||  ||||| |||||||    
T  28194289 tgcgatctttgtcgcacgtgatgttatgagttgacctttgaggtagga 28194336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 14238324 - 14238365
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  14238324 aatttgagatacatatattatgtgaatattgtatgatataga 14238365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 20958452 - 20958340
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||||||||| | | || ||  || |||||||  |||| ||| ||||||||||||||||||  | |||||||||||| ||     
T  20958452 atagcgagtagagtggctcacctcgcgagctgcacaatgtcagacagccttgtttagggtttttgcgatctttgtcgcacgag-tgttatgagttgatcc 20958354  T
Q  101 ttggggtaggaatg 114  Q
    |||| ||| |||||    
T  20958353 ttggtgtaagaatg 20958340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 35260918 - 35260971
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatgga 116  Q
    ||||||||||||||||||  ||||||||||||||  | ||||||||| ||||||    
T  35260918 ttgcgatctttgtcgcacgagatgttatgagttgaacattggggtagtaatgga 35260971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 51082556 - 51082515
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  51082556 aatttgagatacatatattatgtgaatattgtatgatataga 51082515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 20564 - 20790
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    |||| |||||||||| ||| |||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  20564 atagtgagtagagtggctcgcctcgcgagttactcagtggcagtcaggcttatttagtgttcttgcgatctttgtcgcacatgatgttctgagttggtct 20663  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    |||||||||||||| |||||||||||||  | ||  |||||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  20664 ttggggtaggaatgaaagttgtttataattgcattgtctttcagtgagtctgaattaatatgattattgtagttggataatttgagatacatatattatg 20763  T
Q  201 tggaaattgtatgatgtagagatattg 227  Q
    || |||||||||||| |||| ||||||    
T  20764 tgaaaattgtatgatatagaaatattg 20790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 143; Significance: 3e-75; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 4071237 - 4071008
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||| | ||||||||||||| |||    
T  4071237 atagcgagtagagtggctcgcctcgcgagttactcggtggcagtcagccttacttagagttcttgcgatctttgtcgcacgtaatgttatgagttgatct 4071138  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    |||||||  ||||| ||||||||||||||||||||  ||||| | ||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||    
T  4071137 ttggggtgagaatgaaagttgtttataaaggtatagcctttcagagagtctgaattaaaatgattaatgttgttggttaatttgagatacatatattatg 4071038  T
Q  201 tggaaattgtatgatgtagagatattgatgt 231  Q
     |||||||||||||  |||||||||||||||    
T  4071037 aggaaattgtatga-atagagatattgatgt 4071008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 15096225 - 15096465
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| |||||||||||||||||||| ||||| ||||| ||| ||||||||||||||||||||||| ||| ||| | ||||||||     
T  15096225 atagcgagtagagtggctcgcctcgcgagttactcagtggcagtcaaccttatttaatgttcttgcgatctttgtcgcacgtgacgttcttagttggtcc 15096324  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    |||||||||||||| |||||||||||||  ||||  |||||| |||||| ||||||||||||| | ||||||||||  ||||||||||||||||||||||    
T  15096325 ttggggtaggaatgaaagttgtttataattgtattgtctttcagtgagtttgaattaatatgaatgttgttgttggataatttgagatacatatattatg 15096424  T
Q  201 tggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    || | |||||||||| |||| |||||| ||| ||| |||||    
T  15096425 tgaatattgtatgatatagaaatattgttgttcatatcatt 15096465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 15281773 - 15281555
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| | |||||||| ||||||||| ||||||||||||||||  ||||||||||||||||||||| ||||||||| |||||||||    
T  15281773 atagcgagtagagtggctcgcttcgcgagt-actcagtggcagtcagccttacttagatttcttgcgatctttgtcgcacgtgatgttataagttggtct 15281675  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    ||||| || |||||||||||||||| |||||||||  ||||| | ||||||||||| | ||||||| |||||||||| | |||||  |||||||||||||    
T  15281674 ttgggataagaatggaagttgtttacaaaggtatagcctttcagagagtctgaatttaaatgattaatgttgttggttattttgaattacatatattatg 15281575  T
Q  201 tggaaattgtatgatgtaga 220  Q
    |||||| |||||||| ||||    
T  15281574 tggaaagtgtatgatataga 15281555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 26 - 227
Target Start/End: Complemental strand, 15139610 - 15139408
Alignment:
Q  26 cgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgttta 125  Q
    ||||||||||||||| ||||| ||||  |||||| |||||||||||||||||||| ||| ||| ||||||||| ||||||||||||||| ||||||| ||    
T  15139610 cgagttactcagtggcagtcaaccttgtttagtgctcttgcgatctttgtcgcacgtgacgttctgagttggtttttggggtaggaatgaaagttgtcta 15139511  T
Q  126 taaaggtataatctttcggtgagtctgaattaatatg-attattgttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtagagata 224  Q
    |||  ||||  |||||| ||||||||||||||||||| | ||||||||||||  |||||||||||||||||||||||| | |||||||||| |||| |||    
T  15139510 taattgtattgtctttcagtgagtctgaattaatatgaaatattgttgttggataatttgagatacatatattatgtgaacattgtatgatatagaaata 15139411  T
Q  225 ttg 227  Q
    |||    
T  15139410 ttg 15139408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 14219553 - 14219793
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    |||||||||| |||| ||| |||||||||||||||||||| ||||| ||||  |||| ||||||||||||| |||| ||| | | ||| ||| |||||||    
T  14219553 atagcgagtaaagtggctcgcctcgcgagttactcagtggcagtcaaccttgtttagggttcttgcgatctctgtcacacgtaacgttctgacttggtct 14219652  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    |||||||||||||| ||||||||||||||  |||  |  ||| |||||||||||||||||||| | ||||||||||  ||||||||||||||||||||||    
T  14219653 ttggggtaggaatgaaagttgtttataaatatattgttgttcagtgagtctgaattaatatgaatgttgttgttggataatttgagatacatatattatg 14219752  T
Q  201 tggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    || | |||||||||| ||||  ||||| ||| ||| |||||    
T  14219753 tgaatattgtatgatatagaagtattgttgttcatatcatt 14219793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 5 - 225
Target Start/End: Original strand, 19557869 - 19558089
Alignment:
Q  5 cgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttgg 104  Q
    ||||||||||| ||| ||| |||||||||||||||| ||||||| ||  |||| ||||||||||||||| |||||| | | ||| |||||||||||||||    
T  19557869 cgagtagagtggctcgccttgcgagttactcagtggcagtcagcattgtttagggttcttgcgatctttttcgcacgtaacgttctgagttggtctttgg 19557968  T
Q  105 ggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtgga 204  Q
    |||| ||||| |||||||||||||   |||  |  ||| |||||||| ||||||||||| | ||||||||||  |||||||||||||||||||||||| |    
T  19557969 ggtaagaatgaaagttgtttataattatattgttgttccgtgagtctaaattaatatgaatgttgttgttggataatttgagatacatatattatgtgaa 19558068  T
Q  205 aattgtatgatgtagagatat 225  Q
     |||||||||| |||| ||||    
T  19558069 tattgtatgatatagaaatat 19558089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 13132907 - 13133119
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    |||| |||||||||| ||| |||||||||||||||||||| ||||| ||||  |||||||||||||||||||| |||||| ||| ||| ||||||| ||     
T  13132907 atagtgagtagagtggctcgcctcgcgagttactcagtggcagtcaaccttttttagtgttcttgcgatctttttcgcacgtgacgttctgagttgatcc 13133006  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    ||||||||||||||||||||||| ||||   |||  |  |   |||||||||||||||||||| ||| |||||||   ||||||||||||||||||||||    
T  13133007 ttggggtaggaatggaagttgttcataattatattgttgtgtagtgagtctgaattaatatgaatatcgttgttgaataatttgagatacatatattatg 13133106  T
Q  201 tggaaattgtatg 213  Q
    || | ||||||||    
T  13133107 tgaatattgtatg 13133119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 21 - 241
Target Start/End: Original strand, 48809090 - 48809309
Alignment:
Q  21 cctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagtt 120  Q
    |||||||||||||||||||||||||| ||||  |||||||||||||||||||| |||||| ||||||| |||||||||| ||||||||||||| ||||||    
T  48809090 cctcgcgagttactcagtggtagtcaaccttgtttagtgttcttgcgatcttt-tcgcacgtgatgttctgagttggtcattggggtaggaatagaagtt 48809188  T
Q  121 gtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    ||| ||||   |||  |  |   |||||||||||||||||||| ||||| ||||||  ||||||||| |||||||| ||||| | |||||||||| ||||    
T  48809189 gttcataattatattgttgtgtagtgagtctgaattaatatgaatattgatgttgggtaatttgagacacatatatgatgtgaatattgtatgatataga 48809288  T
Q  221 gatattgatgtccatctcatt 241  Q
     |||||| ||| ||| |||||    
T  48809289 aatattgttgttcatatcatt 48809309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 25 - 241
Target Start/End: Complemental strand, 16077809 - 16077593
Alignment:
Q  25 gcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgttt 124  Q
    |||||||||||||||| ||||| ||||  |||||||||||| ||||||| |||||| ||| ||| ||||||||| |||| |||||||||| |||||||||    
T  16077809 gcgagttactcagtggcagtcaaccttgtttagtgttcttgagatctttttcgcacgtgacgttctgagttggtatttgtggtaggaatgaaagttgttt 16077710  T
Q  125 ataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtagagata 224  Q
    ||||   |||  |  ||| |||||| ||||||||||||| | ||||||||||  ||||||| |||||| ||||||||| | |||||||||| |||| |||    
T  16077709 ataatcatattgttgttcagtgagtttgaattaatatgaatgttgttgttggataatttgaaatacatgtattatgtgaatattgtatgatatagaaata 16077610  T
Q  225 ttgatgtccatctcatt 241  Q
    ||| ||| ||| |||||    
T  16077609 ttgttgttcatatcatt 16077593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 11054054 - 11053924
Alignment:
Q  90 tgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagata 189  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||| | |||| ||| || |||||||| || |||||||||| |||||||| ||    
T  11054054 tgagttggtctttggggtaggaatgaaagttgtttataaaggtatagtcttccagtgaatctaaactaatatgactaatgttgttggttaatttgagcta 11053955  T
Q  190 catatattatgtggaaattgtatgatgtaga 220  Q
    ||||||||||||||||| |||||||| ||||    
T  11053954 catatattatgtggaaaatgtatgatataga 11053924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 60 - 218
Target Start/End: Original strand, 8135720 - 8135878
Alignment:
Q  60 ttcttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaat 159  Q
    |||||||| |||||||||||  ||  ||| |||||||| |||||||||||||||| ||||||| |||||  ||||  |||| | |||||| |||||||||    
T  8135720 ttcttgcgttctttgtcgcatgtgtcgttctgagttggactttggggtaggaatgaaagttgtatataattgtattgtcttacagtgagtatgaattaat 8135819  T
Q  160 atgattattgttgttggtcaatttgagatacatatattatgtggaaattgtatgatgta 218  Q
    |||| ||||||||||||  || |||| |||||  ||||||||||| |||| ||| ||||    
T  8135820 atgaatattgttgttggataaattgaaatacacctattatgtggagattgcatgttgta 8135878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 42462294 - 42462168
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||||||||| | | |||||  ||||||||||  |||| |||||||| ||||||||||||||||| |||||||||||  |     
T  42462294 atagcgagtagagtgcctcgcctcgcgagctgcacagtgccagtcagccttgtttagggttcttgcaatctttgtcgcacatgaggttatgagttgaccc 42462195  T
Q  101 ttggggtaggaatggaagttgtttata 127  Q
    |||||||||||||| | |||| |||||    
T  42462194 ttggggtaggaatgaaggttgattata 42462168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 241
Target Start/End: Original strand, 13133216 - 13133337
Alignment:
Q  120 tgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtag 219  Q
    |||||||||  ||||  |||||| |||||||||||||||||||| |||||||| ||   |||||||||||||||||||||||| | |||||||||| |||    
T  13133216 tgtttataattgtattgtctttcagtgagtctgaattaatatgaatattgttgctgaataatttgagatacatatattatgtgaatattgtatgatatag 13133315  T
Q  220 agatattgatgtccatctcatt 241  Q
    | |||||| ||| ||| |||||    
T  13133316 aaatattgttgttcatatcatt 13133337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 36705208 - 36705332
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||||||||| |||||||||| ||||| ||||  |||| |||||||||||||||||||||| |||||||   |||| | |     
T  36705208 atagcgagtagagtggctcgcctcgcgagctactcagtggcagtcaaccttgtttagggttcttgcgatctttgtcgcacgtgatgttgatagtt-gaca 36705306  T
Q  101 ttggggtaggaatggaagttgtttat 126  Q
    ||||||||| ||||||||||| ||||    
T  36705307 ttggggtagaaatggaagttggttat 36705332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 220
Target Start/End: Original strand, 3289446 - 3289580
Alignment:
Q  90 tgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtct----gaattaatatgattattgttgttggtcaatttga 185  Q
    |||||||||  |||||||| ||||||||||||||||||||||||||  ||||| |||| |||     ||||||||| |||  |||||||||| ||||  |    
T  3289446 tgagttggttcttggggtaagaatggaagttgtttataaaggtatagcctttcagtgaatctaagctaattaatataattgatgttgttggttaattcaa 3289545  T
Q  186 gatacatatattatgtggaaattgtatgatgtaga 220  Q
    | ||||||||||||||||||| |||||||| ||||    
T  3289546 gctacatatattatgtggaaaatgtatgatataga 3289580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 9177503 - 9177568
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataa 128  Q
    ||||||||||||||||||  |||||||||||||| ||||||||||||||||||| ||||| |||||    
T  9177503 ttgcgatctttgtcgcacgagatgttatgagttgatctttggggtaggaatggaggttgtatataa 9177568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 177
Target Start/End: Original strand, 21735127 - 21735215
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggt 177  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||  ||||| |||| ||| || |||||  |||  ||||||||||    
T  21735127 atgagttggtctttgtggtaggaatggaagttgtttataaaggtatagcctttcagtgaatctaaactaataaaattgatgttgttggt 21735215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 22000804 - 22001043
Alignment:
Q  1 atagcgagtagagtgtctctcc-tcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtc 99  Q
    ||||||||||||||  ||| || | |||||||||||||||| ||||| ||||  |||||||| |||||  |||||||||||  || |||  ||||||||     
T  22000804 atagcgagtagagtagctcgccatagcgagttactcagtggcagtcaaccttgtttagtgtttttgcgtcctttgtcgcac--ga-gttcagagttggtt 22000900  T
Q  100 tttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctg-aattaatatgattattgttgttggtcaatttgagatacatatatta 198  Q
     |||||||||||||| |||||| ||||||  || |   ||| | ||||||||| ||||| ||||| || |||||||||  ||||||  ||||||||||||    
T  22000901 attggggtaggaatgaaagttgcttataattgtgttgccttacagtgagtctgtaattattatgaatactgttgttggataatttggaatacatatatta 22001000  T
Q  199 tgtggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    |||| | ||| |||| ||| || |||||| ||| ||| |||||    
T  22001001 tgtgaatattatatgttgtggaaatattgttgttcatatcatt 22001043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 16092040 - 16091975
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataa 128  Q
    ||||||||||||||||||  |||||||||||||| || |||||||||||||||| ||||| |||||    
T  16092040 ttgcgatctttgtcgcacgagatgttatgagttgatccttggggtaggaatggaggttgtatataa 16091975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 14036481 - 14036422
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgt 122  Q
    ||||||||||||||||||  |||||||||||||| || |||||||||||||||| |||||    
T  14036481 ttgcgatctttgtcgcacgagatgttatgagttgatccttggggtaggaatggaggttgt 14036422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 14045031 - 14044972
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgt 122  Q
    ||||||||||||||||||  |||||||||||||| || |||||||||||||||| |||||    
T  14045031 ttgcgatctttgtcgcacgagatgttatgagttgatccttggggtaggaatggaggttgt 14044972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 14346511 - 14346452
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgt 122  Q
    ||||||||||||||||||  |||||||||||||| || |||||||||||||||| |||||    
T  14346511 ttgcgatctttgtcgcacgagatgttatgagttgatccttggggtaggaatggaggttgt 14346452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 14355061 - 14355002
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgt 122  Q
    ||||||||||||||||||  |||||||||||||| || |||||||||||||||| |||||    
T  14355061 ttgcgatctttgtcgcacgagatgttatgagttgatccttggggtaggaatggaggttgt 14355002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 17017305 - 17017363
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttg 121  Q
    ||||||||||||||||||| |||||||||||||| || |||||||||| ||||| ||||    
T  17017305 ttgcgatctttgtcgcacaagatgttatgagttgatccttggggtagggatggaggttg 17017363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 9725497 - 9725562
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataa 128  Q
    |||||||| |||||||||  |||||||| ||||| || |||||||||||||||| |||||||||||    
T  9725497 ttgcgatccttgtcgcacgagatgttattagttgatccttggggtaggaatggaggttgtttataa 9725562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 9033183 - 9033247
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttata 127  Q
    ||||||||||||||||||  ||||||||||||||  | |||||||||||||||| |||| |||||    
T  9033183 ttgcgatctttgtcgcacgagatgttatgagttgacccttggggtaggaatggaggttggttata 9033247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 130644 - 130705
Alignment:
Q  54 ttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatgg 115  Q
    |||| ||||||||||||||| |||||| ||| ||| ||||||| || |||||||||||||||    
T  130644 ttagggttcttgcgatctttatcgcacgtgaggttttgagttgatccttggggtaggaatgg 130705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 13255959 - 13255914
Alignment:
Q  90 tgagttggtctttggggtaggaatggaagttgtttataaaggtata 135  Q
    |||||||||  |||||||| ||||||||||||||||||||||||||    
T  13255959 tgagttggttcttggggtaagaatggaagttgtttataaaggtata 13255914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 135
Target Start/End: Complemental strand, 13256054 - 13256009
Alignment:
Q  90 tgagttggtctttggggtaggaatggaagttgtttataaaggtata 135  Q
    |||||||||  |||||||| ||||||||||||||||||||||||||    
T  13256054 tgagttggttcttggggtaagaatggaagttgtttataaaggtata 13256009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 1489934 - 1490005
Alignment:
Q  170 ttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    |||||||  ||||||| |||||||||||||||| | |||||||||| |||| |||||| ||| ||| |||||    
T  1489934 ttgttggataatttgatatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcatt 1490005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 45 - 128
Target Start/End: Complemental strand, 16996522 - 16996439
Alignment:
Q  45 cagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataa 128  Q
    |||||||  |||| |||||||||||||||||||||| ||| ||| |||||||  | || || |||||||||| |||| ||||||    
T  16996522 cagccttgtttagggttcttgcgatctttgtcgcacgtgaggttttgagttgacccttaggttaggaatggaggttgattataa 16996439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 121
Target Start/End: Original strand, 10659564 - 10659624
Alignment:
Q  60 ttcttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttg 121  Q
    ||||||||||||||||||||| ||||||| | ||||| || ||||| ||| |||||||||||    
T  10659564 ttcttgcgatctttgtcgcacgtgatgttgtaagttgatc-ttgggatagaaatggaagttg 10659624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 14258732 - 14258691
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  14258732 aatttgagatacatatattatgtgaatattgtatgatataga 14258691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 14929044 - 14929085
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  14929044 aatttgagatacatatattatgtgaatattgtatgatataga 14929085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 15352510 - 15352551
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  15352510 aatttgagatacatatattatgtgaatattgtatgatataga 15352551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 16460604 - 16460645
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  16460604 aatttgagatacatatattatgtgaatattgtatgatataga 16460645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 16580040 - 16579999
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  16580040 aatttgagatacatatattatgtgaatattgtatgatataga 16579999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 16585623 - 16585664
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  16585623 aatttgagatacatatattatgtgaatattgtatgatataga 16585664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 32301562 - 32301521
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  32301562 aatttgagatacatatattatgtgaatattgtatgatataga 32301521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 220
Target Start/End: Original strand, 43277518 - 43277579
Alignment:
Q  160 atgattattgttgttggtcaatttgagatacatata-ttatgtggaaattgtatgatgtaga 220  Q
    ||||||| |||||||||| ||| ||| ||||||||| ||||||||||| |||||||| ||||    
T  43277518 atgattaatgttgttggttaatgtgaaatacatatatttatgtggaaaatgtatgatataga 43277579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 11768756 - 11768820
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttata 127  Q
    ||||||||||||||| ||  |||||||||||| |  | |||||||||||||||| |||| |||||    
T  11768756 ttgcgatctttgtcgtacgagatgttatgagtcgacccttggggtaggaatggaggttgattata 11768820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 125
Target Start/End: Complemental strand, 48273636 - 48273600
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgttta 125  Q
    ||||||||||||||||||||||||||| || ||||||    
T  48273636 atgagttggtctttggggtaggaatggtagctgttta 48273600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 136; Significance: 5e-71; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 16059742 - 16059523
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||| |||||||||||| ||| | |||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||    
T  16059742 atagcgagtagagtggctcgccttgcgagttactcattggcaatcagccttacctagtgttcttgcgatcattgtcgcacgtgatgttatgagttggtct 16059643  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    ||||||||||||||||||||||||| |||||||||| ||||| | |||| |||||||| ||||||| |||||||||| | ||||| ||||||||||||||    
T  16059642 ttggggtaggaatggaagttgtttacaaaggtataacctttcagagagtttgaattaaaatgattaatgttgttggttattttgaaatacatatattatg 16059543  T
Q  201 tggaaattgtatgatgtaga 220  Q
    |||||| |||||||| ||||    
T  16059542 tggaaagtgtatgatataga 16059523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 16044882 - 16044663
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| |||||||||||||||||||| | |||||||||| |||||||||||||||| ||||||||| ||||||||||| |||||||    
T  16044882 atagcgagtagagtggctcgcctcgcgagttactcagtggcaatcagccttacctagtgttcttgcgatcattgtcgcacgtgatgttatgaattggtct 16044783  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    |||||||||||||| |||||||||| |||||||||| ||||| | |||| |||||||| ||||||| |||||||||| | ||||| ||||||||||||||    
T  16044782 ttggggtaggaatgaaagttgtttacaaaggtataacctttcagagagtttgaattaaaatgattaatgttgttggttattttgaaatacatatattatg 16044683  T
Q  201 tggaaattgtatgatgtaga 220  Q
     ||||| |||||||| ||||    
T  16044682 cggaaagtgtatgatataga 16044663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 32 - 220
Target Start/End: Complemental strand, 13179623 - 13179435
Alignment:
Q  32 actcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataaagg 131  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  13179623 actcagtggcagtcagccttacttagtgttcttgcgatctttgtcgcacgtaatgttatgagttggtccttgggataggaatgaaagttgtttataaagg 13179524  T
Q  132 tataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    ||||  ||||| |||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||| ||| |||||||| ||||    
T  13179523 tatagcctttcagtgagtctaaattaatatgattattgttgttggttaatttgagctacatatattatgtgaaaaatgtatgatataga 13179435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 25 - 227
Target Start/End: Complemental strand, 11563107 - 11562905
Alignment:
Q  25 gcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgttt 124  Q
    |||||||  ||||||| ||||||||||| ||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||| |||||||||    
T  11563107 gcgagttgatcagtggaagtcagccttaattagtgttcttgcgatctttgtcgcacgtgacgttctgagttggtctttggggtaggaatgaaagttgttt 11563008  T
Q  125 ataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtagagata 224  Q
    |||| ||||| | ||||| |||||||||||||||||||| |||||||||||   |||||||||||||||||||||||| | |||| ||||| |||| |||    
T  11563007 ataatggtattagctttcagtgagtctgaattaatatgaatattgttgttgactaatttgagatacatatattatgtgaatattgaatgatatagaaata 11562908  T
Q  225 ttg 227  Q
    |||    
T  11562907 ttg 11562905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 16050357 - 16050140
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||| ||||| ||| |||||||||||||| ||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16050357 atagcgagtggagtggctcgcctcgcgagttactaagtggcaatcagccttacctagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 16050258  T
Q  101 ttggg-gtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattat 199  Q
    ||||| ||||||||||||| |||||| |||||||||| ||||| | | || |||||||| |||||||    ||||||| | ||||| |||||||||||||    
T  16050257 ttgggtgtaggaatggaagatgtttacaaaggtataacctttcagagtgtttgaattaaaatgatta---atgttggttattttgatatacatatattat 16050161  T
Q  200 gtggaaattgtatgatgtaga 220  Q
    ||||||| |||||||| ||||    
T  16050160 gtggaaagtgtatgatataga 16050140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 22 - 241
Target Start/End: Original strand, 17258786 - 17259005
Alignment:
Q  22 ctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttg 121  Q
    |||||||||||| || ||||||||| | ||  |||||||||||||||||||| || ||| ||| ||| |||||||||| |||||||||||||| ||||||    
T  17258786 ctcgcgagttacgcattggtagtcaactttgtttagtgttcttgcgatctttttcacacgtgaggttctgagttggtccttggggtaggaatgtaagttg 17258885  T
Q  122 tttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtagag 221  Q
    || ||||   |||| | ||   |||||||||||||||||||| ||||| |||| |  ||||| |||||||| ||||||||| | |||||||||| ||||     
T  17258886 ttcataattatatagttttgtagtgagtctgaattaatatgaatattgatgttagataatttaagatacatgtattatgtgaatattgtatgatatagaa 17258985  T
Q  222 atattgatgtccatctcatt 241  Q
    |||||| ||| ||| |||||    
T  17258986 atattgttgttcatatcatt 17259005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 90 - 215
Target Start/End: Complemental strand, 20417502 - 20417377
Alignment:
Q  90 tgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagata 189  Q
    |||||||||||||||||||||  ||||||||||||||||| |||||  ||||| |||| ||| || ||||||||||| |||||||||| |||||||| ||    
T  20417502 tgagttggtctttggggtagggttggaagttgtttataaatgtatagcctttcagtgaatctaaactaatatgattaatgttgttggttaatttgagcta 20417403  T
Q  190 catatattatgtggaaattgtatgat 215  Q
    ||||||||||||||||| ||||||||    
T  20417402 catatattatgtggaaaatgtatgat 20417377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 11886211 - 11886344
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||| ||||  |||| || |||||||| || ||||||| ||||||| ||||||| ||     
T  11886211 atagcgagtagagtggctcgcctcgcgagttactcagtggtagtcaaccttgtttagggtccttgcgatgttcgtcgcacgtgatgttgtgagttgatc- 11886309  T
Q  101 ttggggtaggaatggaagttgtttataaaggtata 135  Q
    ||||| |||||||||||||||||||| ||| ||||    
T  11886310 ttgggataggaatggaagttgtttattaagttata 11886344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 14818449 - 14818318
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagat 188  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||   |||| |||| ||| || |||||| |||  |||||||||| ||||| || |    
T  14818449 atgagttggtctttggggtaggaatgggagttgtttataaaggtatagcttttcagtgaatctaaactaatataattgatgttgttggttaatttaagct 14818350  T
Q  189 acatatattatgtggaaattgtatgatgtaga 220  Q
    | |||||||||||||||| |||||||| ||||    
T  14818349 atatatattatgtggaaaatgtatgatataga 14818318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 52338592 - 52338723
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagat 188  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||   |||| |||| ||| |  |||||| |||  |||||||||| ||||| || |    
T  52338592 atgagttggtcattggggtaggaatggaagttgtttataaaggtatagcttttcagtgaatctaagctaatataattgatgttgttggttaatttaagct 52338691  T
Q  189 acatatattatgtggaaattgtatgatgtaga 220  Q
    | |||||||||||||||| |||||||| ||||    
T  52338692 atatatattatgtggaaaatgtatgatataga 52338723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 137 - 226
Target Start/End: Complemental strand, 11192313 - 11192224
Alignment:
Q  137 tctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtagagatatt 226  Q
    |||||| |||||||||||||||||||| |||||||||||   |||||||||||||||||||||||| | |||||||||| |||| |||||    
T  11192313 tctttcagtgagtctgaattaatatgaatattgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaatatt 11192224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 241
Target Start/End: Complemental strand, 11562818 - 11562697
Alignment:
Q  120 tgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtag 219  Q
    |||||||||  ||||  |||||| |||||||||||||||||||| |||||||||||   |||| ||||||||||||||||||| | |||||||||| |||    
T  11562818 tgtttataattgtattgtctttcagtgagtctgaattaatatgaatattgttgttgaataattagagatacatatattatgtgaatattgtatgatatag 11562719  T
Q  220 agatattgatgtccatctcatt 241  Q
    | |||||| ||| ||| |||||    
T  11562718 aaatattgttgttcatatcatt 11562697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 120
Target Start/End: Original strand, 12512361 - 12512476
Alignment:
Q  4 gcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttg 103  Q
    |||||||||||| ||| ||||||||| |||||||||| ||||| ||||  |||| |||||||||||||||||||||| |||||||  |||||| || |||    
T  12512361 gcgagtagagtggctcgcctcgcgagctactcagtggcagtcaaccttgtttagggttcttgcgatctttgtcgcacgtgatgttgagagttgatc-ttg 12512459  T
Q  104 gggtaggaatggaagtt 120  Q
    |||||| |||| |||||    
T  12512460 gggtagaaatgaaagtt 12512476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 17548174 - 17548309
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtct----gaattaatatgattattgttgttggtcaatttg 184  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||  ||||| |||| |||     ||||||||| |||  |||||||||| ||||      
T  17548174 atgagttggtccttggggtaggaatggaagttgtttataaaagtatagcctttcagtgaatctaagctaattaatataattgatgttgttggttaattca 17548273  T
Q  185 agatacatatattatgtggaaattgtatgatgtaga 220  Q
    || || |||||||||||||||| |||||||| ||||    
T  17548274 agctatatatattatgtggaaaatgtatgatataga 17548309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 14250663 - 14250750
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgtt 88  Q
    ||||||||||||||| ||| ||||||||| |||||||||| ||||| ||||  |||  |||||||||||||||||||||| |||||||    
T  14250663 atagcgagtagagtggctcgcctcgcgaggtactcagtggcagtcaaccttgtttaaggttcttgcgatctttgtcgcacgtgatgtt 14250750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 11850279 - 11850405
Alignment:
Q  90 tgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtct----gaattaatatgattattgttgttggtcaatttga 185  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||||  ||||| |||| |||     ||||||||| |||  |||||||||| ||||  |    
T  11850279 tgagttggtttttggggtaagaatgggagttgtttataaaggtatagcctttcagtgaatctaagctaattaatataattgatgttgttggttaattcaa 11850378  T
Q  186 gatacatatattatgtggaaattgtat 212  Q
    | ||||||||||||||||||| |||||    
T  11850379 gctacatatattatgtggaaaatgtat 11850405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 149 - 241
Target Start/End: Complemental strand, 6155998 - 6155906
Alignment:
Q  149 tctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    ||||||||||||||| |||||||||||   |||||||||||||||| ||||||| | |||||||||| |||| |||||| ||| ||| |||||    
T  6155998 tctgaattaatatgaatattgttgttgaataatttgagatacatatgttatgtgaatattgtatgatatagaaatattgttgttcatatcatt 6155906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 10550693 - 10550562
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagat 188  Q
    ||||||||||| ||||| ||||||||||||||||||||||| |||||  || || || | | | || |||||| |||  |||||||||| ||||| || |    
T  10550693 atgagttggtccttgggataggaatggaagttgtttataaaagtatagcctctcagtcaatataaactaatataattgatgttgttggttaatttaagct 10550594  T
Q  189 acatatattatgtggaaattgtatgatgtaga 220  Q
    | |||| ||||||||||| |||||||| ||||    
T  10550593 atatattttatgtggaaaatgtatgatataga 10550562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 127
Target Start/End: Original strand, 32402799 - 32402862
Alignment:
Q  64 tgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttata 127  Q
    |||||||||||||||||  |||||||||||||| ||||| ||||||||||||| |||| |||||    
T  32402799 tgcgatctttgtcgcacgagatgttatgagttgatctttagggtaggaatggaggttgattata 32402862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 52213105 - 52213227
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagat 188  Q
    |||||||||||||||||||||| ||| ||||||||||| ||||||||   |||  |||| ||| || |||||| |||  |||||||||| ||||| || |    
T  52213105 atgagttggtctttggggtagggatgaaagttgtttatgaaggtatagcattttagtgaatct-aactaatataatttatgttgttggttaatttaagtt 52213203  T
Q  189 acatatattatgtggaaattgtat 212  Q
      |||||||||||||||| |||||    
T  52213204 gtatatattatgtggaaaatgtat 52213227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 215
Target Start/End: Original strand, 45531247 - 45531370
Alignment:
Q  90 tgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagata 189  Q
    ||||||||||||||||||||||||| |||||||| ||||   |||  | |||| ||||||||||||||| |||||||  || ||| || |||||||| ||    
T  45531247 tgagttggtctttggggtaggaatgaaagttgttcataattatattgtgtttcagtgagtctgaattaa-atgatta-agtagtt-gttaatttgagtta 45531343  T
Q  190 catata-ttatgtggaaattgtatgat 215  Q
    |||||| ||||||||||| ||||||||    
T  45531344 catatatttatgtggaaaatgtatgat 45531370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 14441557 - 14441486
Alignment:
Q  170 ttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    |||||||  |||||||||||||||||||||||| | |||||||||| |||| |||||| ||| ||| |||||    
T  14441557 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatgtcatt 14441486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 15447599 - 15447654
Alignment:
Q  60 ttcttgcgatcttt-gtcgcacatgatgttatgagttggtctttggggtaggaatg 114  Q
    |||||||||||||| ||||||||||||||||||||||| || || |||||||||||    
T  15447599 ttcttgcgatcttttgtcgcacatgatgttatgagttgatccttagggtaggaatg 15447654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 17046551 - 17046480
Alignment:
Q  170 ttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    |||||||  |||||||||||||||||||||||| | |||||||||| |||| |||||| ||| ||| |||||    
T  17046551 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcatt 17046480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 54876146 - 54876217
Alignment:
Q  170 ttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    |||||||  |||||||||||||||||||||||| | |||||||||| |||| |||||| ||| ||| |||||    
T  54876146 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcatt 54876217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 241
Target Start/End: Original strand, 19569041 - 19569103
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    |||||||||||||||||||||||| | |||||||||| |||| |||||| ||| ||| |||||    
T  19569041 aatttgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcatt 19569103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 128
Target Start/End: Complemental strand, 37428006 - 37427932
Alignment:
Q  54 ttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataa 128  Q
    |||| |||||||||||  |||||||||  |||||||||||||| || |||||||||||||| | |||| ||||||    
T  37428006 ttagggttcttgcgattcttgtcgcacgagatgttatgagttgatccttggggtaggaatgaaggttggttataa 37427932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 125
Target Start/End: Complemental strand, 21618692 - 21618656
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgttta 125  Q
    ||||||||||||||||||||||||||| |||||||||    
T  21618692 atgagttggtctttggggtaggaatggtagttgttta 21618656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 125
Target Start/End: Complemental strand, 36166841 - 36166805
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgttta 125  Q
    ||||||||||||||||||||||||||| |||||||||    
T  36166841 atgagttggtctttggggtaggaatggtagttgttta 36166805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 316402 - 316339
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttat 126  Q
    ||||||||||||||||||  |||||||||||||| || ||||| || ||||||| |||| ||||    
T  316402 ttgcgatctttgtcgcacgagatgttatgagttgatcattgggatatgaatggaggttgattat 316339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 11192470 - 11192399
Alignment:
Q  170 ttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    |||||||  |||||||||||||| ||||||||| | |||||||||| |||| |||||| ||| ||| |||||    
T  11192470 ttgttggataatttgagatacatttattatgtgaatattgtatgatatagaaatattgttgttcatatcatt 11192399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 121
Target Start/End: Complemental strand, 13919593 - 13919554
Alignment:
Q  82 tgatgttatgagttggtctttggggtaggaatggaagttg 121  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  13919593 tgatgttatgagttgatctttggggtaggaatggaggttg 13919554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 17691468 - 17691539
Alignment:
Q  170 ttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    |||||||  ||||||| |||||||||||||||| | |||||||||| |||| |||||| ||| ||| |||||    
T  17691468 ttgttggataatttgatatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcatt 17691539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 123
Target Start/End: Complemental strand, 12158692 - 12158658
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtt 123  Q
    ||||||||||| |||||||||||||||||||||||    
T  12158692 atgagttggtccttggggtaggaatggaagttgtt 12158658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 12470182 - 12470141
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  12470182 aatttgagatacatatattatgtgaatattgtatgatataga 12470141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 14671204 - 14671163
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  14671204 aatttgagatacatatattatgtgaatattgtatgatataga 14671163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 14682703 - 14682662
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  14682703 aatttgagatacatatattatgtgaatattgtatgatataga 14682662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 15246301 - 15246244
Alignment:
Q  64 tgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttg 121  Q
    |||||| ||||||||||  |||||||||||||| || ||| |||||||||||| ||||    
T  15246301 tgcgatttttgtcgcacgagatgttatgagttgatccttgtggtaggaatggaggttg 15246244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 18700145 - 18700186
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  18700145 aatttgagatacatatattatgtgaatattgtatgatataga 18700186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 42353385 - 42353426
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  42353385 aatttgagatacatatattatgtgaatattgtatgatataga 42353426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 43889471 - 43889512
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  43889471 aatttgagatacatatattatgtgaatattgtatgatttaga 43889512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 23395699 - 23395743
Alignment:
Q  90 tgagttggtctttggggtaggaatggaagttgtttataaaggtat 134  Q
    |||||||||  |||||||| ||||| |||||||||||||||||||    
T  23395699 tgagttggttcttggggtatgaatgaaagttgtttataaaggtat 23395743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 136157 - 136397
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| |||| ||||||||||||||  ||||| ||||| ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  136157 atagcgagtagagtggctcgcctcacgagttactcagtgacagtcatccttatttagtgttcttgcgatctttgtcgcacgtgatgttctgagttggtct 136256  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    |||||||||||||| |||||||||||||    ||  | |||| ||||||||||||||||||||||||||| |||||  ||||||||||||||||||||||    
T  136257 ttggggtaggaatgaaagttgtttataattacattgtttttcagtgagtctgaattaatatgattattgtagttggataatttgagatacatatattatg 136356  T
Q  201 tggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    || |||||||||||| |||| |||||| ||| ||| |||||    
T  136357 tgaaaattgtatgatatagaaatattgttgttcatatcatt 136397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 5 - 220
Target Start/End: Original strand, 2475 - 2691
Alignment:
Q  5 cgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttgg 104  Q
    ||||||||||| ||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||  |||||||| |||||||||| | |    
T  2475 cgagtagagtggctcgcctcgcgagttactcagtggcagtcagccttacttagagttcttgcgatctttgtcgcatgtgatgttacgagttggtctgtag 2574  T
Q  105 ggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaa-tttgagatacatatattatgtgg 203  Q
    |||| ||||||||||||||||||||||||||  ||||| | ||||||||||||| || |||| || ||||||| || |||||||||||||||||||||||    
T  2575 ggtatgaatggaagttgtttataaaggtatagcctttcagagagtctgaattaaaatcattaatgatgttggttaattttgagatacatatattatgtgg 2674  T
Q  204 aaattgtatgatgtaga 220  Q
    |||||||||||| ||||    
T  2675 aaattgtatgatataga 2691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 129; Significance: 7e-67; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 32 - 220
Target Start/End: Original strand, 127365 - 127553
Alignment:
Q  32 actcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataaagg 131  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||| |||||||| ||||||||||||||||    
T  127365 actcagtggcagtcagccttacttagtgttcttgcgatctttgtcgcacgtaatgttatgagttggtccttgggataggaatgaaagttgtttataaagg 127464  T
Q  132 tataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    ||||  ||||| |||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||| ||| |||||||| ||||    
T  127465 tatagcctttcagtgagtctaaattaatatgattattgttgttggttaatttgagctacatatattatgtgaaaaatgtatgatataga 127553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 398008 - 397852
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||||||||| |||  ||||| |||||  |||  |||| |||||||||||  ||||||||| ||||||| ||||||| | |    
T  398008 atagcgagtagagtggctcgcctcgcgagctacctagtggcagtcaaacttctttagggttcttgcgatacttgtcgcacgtgatgttgtgagttgat-t 397910  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaa 158  Q
     |||| |||||||| ||| ||||||  ||| ||||  ||||| | ||| |||||||||    
T  397909 atgggataggaatgaaagctgtttaataagttatagactttcagagagcctgaattaa 397852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 4e-59; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 31735463 - 31735681
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| |||| ||||||||||||||| ||| ||||| |||| |||||||||||||||||||||||| ||||||| |||||||||||    
T  31735463 atagcgagtagagtggctcgcctcacgagttactcagtggcagttagcctcacttggtgttcttgcgatctttgtcgcacgtgatgttctgagttggtct 31735562  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    ||||||||||||| ||||||||||||||   |||  |  ||| ||||||||||||||| ||||||| |||||||||| ||||||| ||||||||||||||    
T  31735563 ttggggtaggaat-gaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaatttgaaatacatatattatg 31735661  T
Q  201 tggaaattgtatgatgtaga 220  Q
    |||||| ||| |||| ||||    
T  31735662 tggaaaatgtttgatataga 31735681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 6083327 - 6083547
Alignment:
Q  1 atagcgagtagagtgtctctcc-tcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtc 99  Q
    ||||||||||||||| ||| || | |||||||||||| ||| ||||| |||| ||||||||||||||| |||||||||||| ||  ||| ||||||||||    
T  6083327 atagcgagtagagtggctcaccatagcgagttactcaatggcagtcaaccttgcttagtgttcttgcgttctttgtcgcacgtgtcgttctgagttggtc 6083426  T
Q  100 tttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattat 199  Q
    ||| ||||||||||| |||||||||||||  |||| |||||||  ||||||||||||||| ||| || |||||||||  || |||| || ||||||||||    
T  6083427 tttagggtaggaatgaaagttgtttataattgtattatctttcaatgagtctgaattaatctgaataatgttgttggataaattgaaatgcatatattat 6083526  T
Q  200 gtggaaattgtatgatgtaga 220  Q
    ||| | |||||||| ||||||    
T  6083527 gtgaatattgtatgttgtaga 6083547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 23501139 - 23500899
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| |||||||||||||||||||| ||||| ||||  |||| ||||||||||||| |||||||| | | ||| ||||||||||     
T  23501139 atagcgagtagagtggctcgcctcgcgagttactcagtggcagtcaaccttgtttagggttcttgcgatctctgtcgcacgtaacgttctgagttggtcc 23501040  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    ||||||||||| || ||||| ||||||   | |   |||||| ||||  |||||||||||||| ||||||||||||  |||||||||||| |||||||||    
T  23501039 ttggggtaggagtgaaagttatttatagttggactgtctttcagtgatcctgaattaatatgaatattgttgttggataatttgagatacttatattatg 23500940  T
Q  201 tggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    || | |||||||||| |||| |||||| ||| ||| |||||    
T  23500939 tgaatattgtatgatatagaaatattgttgttcatatcatt 23500899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 22376453 - 22376577
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    |||||||||||| |||||| || ||||||||||||||||| || |   |||  |||| ||||||||||||||||||||||| |||||||||||||||||     
T  22376453 atagcgagtagattgtctcgccacgcgagttactcagtggcagactatcttgtttagggttcttgcgatctttgtcgcacaagatgttatgagttggtcc 22376552  T
Q  101 ttggggtaggaatggaagttgttta 125  Q
    ||||||||||||||  |||||||||    
T  22376553 ttggggtaggaatgagagttgttta 22376577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 13750981 - 13751112
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagat 188  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||  ||||| || | ||| || |||||| |||  |||||||||| ||||| || |    
T  13750981 atgagttggtcttaggggtaggaatggaagttgtttataaaggtatagcctttcagttaatctaaactaatataattgatgttgttggttaatttaagct 13751080  T
Q  189 acatatattatgtggaaattgtatgatgtaga 220  Q
    | |||||||||||||||| |||||||| ||||    
T  13751081 atatatattatgtggaaaatgtatgatataga 13751112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 89 - 215
Target Start/End: Complemental strand, 24267190 - 24267064
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagat 188  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||| ||| |  |||||| |||  |||||||||| ||||| || |    
T  24267190 atgagttggtccttggggtaggaatggaagttgtttataaaggtataacctttcagtgaatctaagctaatataattgatgttgttggttaatttaagct 24267091  T
Q  189 acatatattatgtggaaattgtatgat 215  Q
    | |||||||||||| ||| ||||||||    
T  24267090 atatatattatgtgaaaaatgtatgat 24267064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 94 - 220
Target Start/End: Original strand, 22212139 - 22212266
Alignment:
Q  94 ttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaat-taatatgattattgttgttggtcaatttgagatacat 192  Q
    ||||||||||||||||||||| |||| ||||||||  | ||  |||| | |||||||||||  |||||||| || |||||||||| ||||||||||||||    
T  22212139 ttggtctttggggtaggaatgaaagtcgtttataattgcattgtcttacagtgagtctgaaagtaatatgaataatgttgttggttaatttgagatacat 22212238  T
Q  193 atattatgtggaaattgtatgatgtaga 220  Q
    |||||||||| |||||||||||| ||||    
T  22212239 atattatgtgaaaattgtatgatataga 22212266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 20077950 - 20078077
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||||||||| | | |||||  || ||| |||  |||| ||||||||||||||||||||||  |||||||||||||| ||     
T  20077950 atagcgagtagagtgcctcgcctcgcgagctgcacagtgtcagacagtcttgtttagggttcttgcgatctttgtcgcacgagatgttatgagttgatcc 20078049  T
Q  101 ttggggtaggaatggaagttgtttataa 128  Q
    |||||||||||||||| |||| ||||||    
T  20078050 ttggggtaggaatggaggttgattataa 20078077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 24550821 - 24550939
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    |||||||||| |||| ||| ||||||||| |||||||||| ||||| ||||  |||| |||||||||||||||||||| |||||||||  |||||| ||     
T  24550821 atagcgagtatagtggctcgcctcgcgagctactcagtggcagtcaaccttgtttagggttcttgcgatctttgtcgcgcatgatgttgagagttgatc- 24550919  T
Q  101 ttggggtaggaatggaagtt 120  Q
    |||||||||  |||||||||    
T  24550920 ttggggtagagatggaagtt 24550939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 16245687 - 16245567
Alignment:
Q  5 cgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttgg 104  Q
    ||||||||||| ||| ||||||||||| |  |||| ||| || ||||  |||| |||||||||||||||||||||||  |||||| ||||||||| ||||    
T  16245687 cgagtagagtggctcgcctcgcgagttgcatagtgttagacaaccttgtttagggttcttgcgatctttgtcgcaca-aatgttaagagttggtccttgg 16245589  T
Q  105 ggtaggaatggaagttgtttat 126  Q
    ||||||||||  ||||||||||    
T  16245588 ggtaggaatgagagttgtttat 16245567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 23491974 - 23492069
Alignment:
Q  120 tgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtggaaattgtatgat 215  Q
    |||||||||  ||||  |||||| |||||||||||||||||||| | |||||||||   |||||||||||||||||||||||| | ||||||||||    
T  23491974 tgtttataattgtattgtctttcagtgagtctgaattaatatgaattttgttgttgaataatttgagatacatatattatgtgaatattgtatgat 23492069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 23497572 - 23497667
Alignment:
Q  120 tgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtggaaattgtatgat 215  Q
    |||||||||  ||||  |||||| |||||||||||||||||||| | |||||||||   |||||||||||||||||||||||| | ||||||||||    
T  23497572 tgtttataattgtattgtctttcagtgagtctgaattaatatgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgat 23497667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 5110399 - 5110525
Alignment:
Q  90 tgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtct----gaattaatatgattattgttgttggtcaatttga 185  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||||  ||||| |||| |||     ||||||||| |||  |||||||||| ||||  |    
T  5110399 tgagttggtttttggggtaagaatgggagttgtttataaaggtatagcctttcagtgaatctaagctaattaatataattgatgttgttggttaattcaa 5110498  T
Q  186 gatacatatattatgtggaaattgtat 212  Q
    | ||||||||||||||||||| |||||    
T  5110499 gctacatatattatgtggaaaatgtat 5110525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 18453474 - 18453401
Alignment:
Q  54 ttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttata 127  Q
    |||| ||| ||||||||||||||||||| |||||||||||||| || |||||||||||||||| |||| |||||    
T  18453474 ttagggtttttgcgatctttgtcgcacaagatgttatgagttgatccttggggtaggaatggaggttgattata 18453401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 18696770 - 18696712
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttg 121  Q
    ||||||||||||||||||  |||||||||||||| || |||||||||||||||| ||||    
T  18696770 ttgcgatctttgtcgcacgagatgttatgagttgatccttggggtaggaatggaggttg 18696712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 20224226 - 20224168
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttg 121  Q
    ||||||||||||||||||  |||||||||||||| || |||||||||||||||| ||||    
T  20224226 ttgcgatctttgtcgcacgagatgttatgagttgatccttggggtaggaatggaggttg 20224168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 22118210 - 22118152
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttg 121  Q
    ||||||||||||||||||  |||||||||||||| || |||||||||||||||| ||||    
T  22118210 ttgcgatctttgtcgcacgagatgttatgagttgatccttggggtaggaatggaggttg 22118152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 15896280 - 15896154
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcac-atgatgttatgagttggtc 99  Q
    ||||||||||||||| ||| |||| |||| | | |||||  || || ||||  |||| |||||||||||||||||||||| | || ||||||||||||||    
T  15896280 atagcgagtagagtggctcgcctcacgagctgcacagtgacagacaaccttgattagggttcttgcgatctttgtcgcacgaaga-gttatgagttggtc 15896182  T
Q  100 tttggggtaggaatggaagttgtttataa 128  Q
     ||||||||| ||| ||||||| ||||||    
T  15896181 cttggggtagaaat-gaagttgcttataa 15896154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 212
Target Start/End: Original strand, 5289761 - 5289884
Alignment:
Q  93 gttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtct----gaattaatatgattattgttgttggtcaatttgagat 188  Q
    |||||| ||||||||| |||||  ||||| |||||||||||||  ||||| |||| |||     ||||||||| |||  |||||||||| ||||  || |    
T  5289761 gttggtttttggggtaagaatgagagttggttataaaggtatagcctttcagtgaatctaagctaattaatataattgatgttgttggttaattcaagct 5289860  T
Q  189 acatatattatgtggaaattgtat 212  Q
    |||||||||||||||||| |||||    
T  5289861 acatatattatgtggaaaatgtat 5289884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 20137013 - 20136887
Alignment:
Q  2 tagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctt 101  Q
    |||||||||||||| ||| ||||||||| | | ||| || || |  ||||  |||| |||||||||||  |||||||||  |||||||||||||| || |    
T  20137013 tagcgagtagagtggctcgcctcgcgagctgcacaggggcagactaccttgtttagggttcttgcgattcttgtcgcacgagatgttatgagttgatcct 20136914  T
Q  102 tggggtaggaatggaagttgtttataa 128  Q
    | ||||||||||| | |||| ||||||    
T  20136913 tagggtaggaatgaaggttggttataa 20136887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 22195856 - 22195982
Alignment:
Q  2 tagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctt 101  Q
    |||||||||||||| ||| ||||||||| | | ||| || || |  ||||  |||| |||||||||||  |||||||||  |||||||||||||| || |    
T  22195856 tagcgagtagagtggctcgcctcgcgagctgcacaggggcagactaccttgtttagggttcttgcgattcttgtcgcacgagatgttatgagttgatcct 22195955  T
Q  102 tggggtaggaatggaagttgtttataa 128  Q
    | ||||||||||| | |||| ||||||    
T  22195956 tagggtaggaatgaaggttggttataa 22195982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 33443328 - 33443270
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttg 121  Q
    ||||||||||||||||||  |||||||||||||| || || ||||||||||||| ||||    
T  33443328 ttgcgatctttgtcgcacgagatgttatgagttgatccttagggtaggaatggaggttg 33443270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 125
Target Start/End: Original strand, 16448435 - 16448471
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgttta 125  Q
    ||||||||||||||||||||||||||| |||||||||    
T  16448435 atgagttggtctttggggtaggaatggtagttgttta 16448471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 127
Target Start/End: Complemental strand, 16493430 - 16493366
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttata 127  Q
    |||||||| |||||||||| ||||||||||||||  | |||||||||||||| | |||| |||||    
T  16493430 ttgcgatccttgtcgcacaagatgttatgagttgacccttggggtaggaatgaaggttgattata 16493366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 114
Target Start/End: Complemental strand, 25738671 - 25738611
Alignment:
Q  54 ttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatg 114  Q
    |||| |||||||||||||||||||||   |||||||||||||| || ||||| ||||||||    
T  25738671 ttagggttcttgcgatctttgtcgcatgagatgttatgagttgatccttgggttaggaatg 25738611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 19655892 - 19655963
Alignment:
Q  170 ttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    |||||||  |||| ||||||||||||||||||| | |||||||||| |||| |||||| ||| ||| |||||    
T  19655892 ttgttggataattcgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcatt 19655963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 23491843 - 23491890
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtagagatatt 226  Q
    |||||||||||||||||||||||| | |||||||||| |||| |||||    
T  23491843 aatttgagatacatatattatgtgaatattgtatgatatagaaatatt 23491890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 23497441 - 23497488
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtagagatatt 226  Q
    |||||||||||||||||||||||| | |||||||||| |||| |||||    
T  23497441 aatttgagatacatatattatgtgaatattgtatgatatagaaatatt 23497488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 17229692 - 17229817
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||||||||||| |  ||||  || |  |||   |||| ||||| |||||||| ||||||| ||| |||||||||||  |     
T  17229692 atagcgagtagagtggctcgcctcgcgagttgcatagtgacagactacctcgtttagggttctggcgatctt-gtcgcacgtgaggttatgagttgaccc 17229790  T
Q  101 ttggggtaggaatggaagttgtttata 127  Q
    |||||||||||||||| |||| |||||    
T  17229791 ttggggtaggaatggaggttgattata 17229817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 19773381 - 19773422
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  19773381 aatttgagatacatatattatgtgaatattgtatgatataga 19773422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 15705283 - 15705319
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgat 215  Q
    |||||||||||||||||||||||| | ||||||||||    
T  15705283 aatttgagatacatatattatgtgaatattgtatgat 15705319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 3628 - 3868
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||  ||| |||||||||||  ||||||| ||||||||||  ||||||||||||||||||||||||||| ||| ||| |||||||||||    
T  3628 atagcgagtagagtagctcgcctcgcgagttgttcagtggcagtcagccttgtttagtgttcttgcgatctttgtcgcacgtgacgttctgagttggtct 3727  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    |||||||||||||| |||| ||||| ||| ||||  |||||| |||| |||||||||||||||  | |||||||||  ||||||||||||||||||||||    
T  3728 ttggggtaggaatgaaagtcgtttacaaatgtattgtctttcagtgaatctgaattaatatgaagaatgttgttggataatttgagatacatatattatg 3827  T
Q  201 tggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    || | | | |||||| |||| |||||| ||| ||| |||||    
T  3828 tgaataatatatgatatagaaatattgttgttcatatcatt 3868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 106; Significance: 4e-53; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 126958 - 127162
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||| ||||||||| ||| |||||||||| |||| |||| | |||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||     
T  126958 atagcaagtagagtggctcgcctcgcgagt-actctgtggcaatcagccctacttagtgttcctgcgatctttgtcgcacgtgatgttatgagttggtcc 127056  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    ||| |||||||||||||||||||||||||||| ||  ||||| | || ||| |||||| ||||||| |||||||||| ||| ||| ||||||||||||||    
T  127057 ttgcggtaggaatggaagttgtttataaaggtttagcctttcagagaatctaaattaaaatgattaatgttgttggttaatgtgaaatacatatattatg 127156  T
Q  201 tggaaa 206  Q
    ||||||    
T  127157 tggaaa 127162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 116
Target Start/End: Original strand, 60556 - 60605
Alignment:
Q  67 gatctttgtcgcacatgatgttatgagttggtctttggggtaggaatgga 116  Q
    ||||||||||||||  ||||||||||||||  | ||||||||||||||||    
T  60556 gatctttgtcgcacgagatgttatgagttgaaccttggggtaggaatgga 60605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 99; Significance: 5e-49; HSPs: 2)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 4069 - 4260
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    |||| |||||||||| ||| |||||||||||||||||||  ||||| ||||  ||||||||||||||||||||||||||| |||  || |||||||||||    
T  4069 atagtgagtagagtggctcgcctcgcgagttactcagtgtcagtcaaccttgtttagtgttcttgcgatctttgtcgcacgtgacattctgagttggtct 4168  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatat 194  Q
    |||||||||||||| |||||||||||||   | || |||||| ||||||||||||||||||||  |||||||||||  ||||||||||||||||    
T  4169 ttggggtaggaatgaaagttgtttataa--ttgtagtctttcagtgagtctgaattaatatgaagattgttgttggataatttgagatacatat 4260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 8629 - 8820
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    |||| |||||||||| ||| |||||||||||||||||||  ||||| ||||  ||||||||||||||||||||||||||| |||  || |||||||||||    
T  8629 atagtgagtagagtggctcgcctcgcgagttactcagtgtcagtcaaccttgtttagtgttcttgcgatctttgtcgcacgtgacattctgagttggtct 8728  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatat 194  Q
    |||||||||||||| |||||||||||||   | || |||||| ||||||||||||||||||||  |||||||||||  ||||||||||||||||    
T  8729 ttggggtaggaatgaaagttgtttataa--ttgtagtctttcagtgagtctgaattaatatgaagattgttgttggataatttgagatacatat 8820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 96; Significance: 3e-47; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 21062038 - 21061820
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    |||||||||||||||||||  ||||||||| ||||||||| ||||||||||  ||||  || || |||||||||||||||||||||||||||||||||||    
T  21062038 atagcgagtagagtgtctcgtctcgcgagt-actcagtggcagtcagccttgtttaggattattacgatctttgtcgcacatgatgttatgagttggtct 21061940  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    ||||||||||| ||||||||||||| ||||||||   ||||| | ||||||||||| | ||||| | |||||||||| | ||| |  ||||| |||||||    
T  21061939 ttggggtaggagtggaagttgtttacaaaggtattgcctttcagagagtctgaatttaaatgatcaatgttgttggttattttcaattacatttattatg 21061840  T
Q  201 tggaaattgtatgatgtaga 220  Q
    |||||| ||| |||| ||||    
T  21061839 tggaaaatgtttgatataga 21061820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 4615693 - 4615824
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagat 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  || || |||| ||| || | |||| |||  |||||||||| |||||||| |    
T  4615693 atgagttggtctttggggtaggaatggaagttgtttataaaggtatagcctctcagtgaatctaaactcatataattgatgttgttggttaatttgagtt 4615792  T
Q  189 acatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||| |||||||| ||||    
T  4615793 acatatattatgtggaaaatgtatgatataga 4615824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 15612490 - 15612366
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgtt-cttgcgatctttgtcgcacatgatgttatgagttggtc 99  Q
    ||||||||||||||| ||| |||| ||||| || |||||| |||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||| ||    
T  15612490 atagcgagtagagtggctcgcctcacgagt-acccagtggcagtcagccctacttagtgtttcttgcgatctttgtcgcacgtgatgttatgagttgatc 15612392  T
Q  100 tttggggtaggaatggaagttgtttat 126  Q
     ||||| ||||||| ||||||||||||    
T  15612391 -ttgggataggaattgaagttgtttat 15612366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 51993032 - 51992902
Alignment:
Q  3 agcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtcttt 102  Q
    ||||||||||||| ||| ||||||||| |||||||||| ||||| ||||  |||| ||||||| |||||||||||||| ||||||| ||||||| || ||    
T  51993032 agcgagtagagtggctcgcctcgcgagctactcagtggcagtca-ccttgtttagggttcttgtgatctttgtcgcacgtgatgttgtgagttgatc-tt 51992935  T
Q  103 ggggtaggaatggaagttgtttataaaggtata 135  Q
    ||| |||||||||||||||||||| ||| ||||    
T  51992934 gggttaggaatggaagttgtttattaagttata 51992902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 14933068 - 14933199
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagat 188  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||  ||||| |||| ||| |  |||||| |||  |||||||||| ||||| || |    
T  14933068 atgagttggtccttggggtaggaatggaagttgtttataaaggtatagcctttcagtgaatctaagctaatataattgatgttgttggttaatttaagct 14933167  T
Q  189 acatatattatgtggaaattgtatgatgtaga 220  Q
    | |||| ||||||||||| |||||||| ||||    
T  14933168 atatatgttatgtggaaaatgtatgatataga 14933199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 120 - 226
Target Start/End: Complemental strand, 14630075 - 14629969
Alignment:
Q  120 tgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtag 219  Q
    |||||||||| ||||  |||||| |||||||||||||||||||| |||||||||||   |||||||||||||||||||||||| | |||||||||| |||    
T  14630075 tgtttataaatgtattgtctttcagtgagtctgaattaatatgaatattgttgttgaataatttgagatacatatattatgtgaatattgtatgatatag 14629976  T
Q  220 agatatt 226  Q
    | |||||    
T  14629975 aaatatt 14629969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 20899387 - 20899518
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagat 188  Q
    ||||||||||| |||||||||||||| |||||||||||||||||| ||  |||| |||| ||| |  |||||| |||  |||||||||| ||||| || |    
T  20899387 atgagttggtccttggggtaggaatgaaagttgtttataaaggtacaacttttcagtgaatctaagctaatataattgatgttgttggttaatttaagct 20899486  T
Q  189 acatatattatgtggaaattgtatgatgtaga 220  Q
    | |||||||||||||||| |||||||| ||||    
T  20899487 atatatattatgtggaaaatgtatgatataga 20899518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 93 - 220
Target Start/End: Complemental strand, 27028156 - 27028029
Alignment:
Q  93 gttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacat 192  Q
    ||||||| ||||||||||||||||||||| |||||||||||||  ||||| |||| ||| || |||||| |||  |||||||||| ||||| |  || ||    
T  27028156 gttggtccttggggtaggaatggaagttggttataaaggtatagcctttcagtgaatctaaactaatataattgatgttgttggttaatttaaactatat 27028057  T
Q  193 atattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||| |||||||| ||||    
T  27028056 atattatgtggaaaatgtatgatataga 27028029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 14942273 - 14942405
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagat 188  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||  ||||| |||| ||| |  |||||| |||  |||||||||| ||||| || |    
T  14942273 atgagttggtccttggggtaggaatggaagttgtttataaaggtatagcctttcagtgaatctaagctaatataattgatgttgttggttaatttaagct 14942372  T
Q  189 -acatatattatgtggaaattgtatgatgtaga 220  Q
     | |||| ||||||||||| |||||||| ||||    
T  14942373 aatatatgttatgtggaaaatgtatgatctaga 14942405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 138 - 241
Target Start/End: Original strand, 16026765 - 16026868
Alignment:
Q  138 ctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtagagatattgatgtccatct 237  Q
    ||||| |||||||||||||||||||| |||||||||||   |||||||||||||||||||||||| | ||||| |||| |||| |||||| ||| ||| |    
T  16026765 ctttcagtgagtctgaattaatatgaatattgttgttgaataatttgagatacatatattatgtgaatattgtgtgatatagaaatattgttgttcatat 16026864  T
Q  238 catt 241  Q
    ||||    
T  16026865 catt 16026868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 220
Target Start/End: Original strand, 2584835 - 2584969
Alignment:
Q  90 tgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtct----gaattaatatgattattgttgttggtcaatttga 185  Q
    |||||||||  |||||||| ||||||||||||||||||||| ||||| ||||| |||| |||     ||||||||| |||  |||||||||| ||||  |    
T  2584835 tgagttggttcttggggtaagaatggaagttgtttataaagatataacctttcagtgaatctaagctaattaatataattgatgttgttggttaattcaa 2584934  T
Q  186 gatacatatattatgtggaaattgtatgatgtaga 220  Q
    | ||||||||||||||||||| |||||||| ||||    
T  2584935 gctacatatattatgtggaaaatgtatgatataga 2584969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 220
Target Start/End: Complemental strand, 6512002 - 6511868
Alignment:
Q  90 tgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtct----gaattaatatgattattgttgttggtcaatttga 185  Q
    |||||||||  ||||||||||||||||| ||||||||||||||||| |||||| |||| |||     ||||||||| |||  |||||||||| ||||  |    
T  6512002 tgagttggttcttggggtaggaatggaacttgtttataaaggtatagtctttcagtgaatctaagctaattaatataattgatgttgttggttaattcaa 6511903  T
Q  186 gatacatatattatgtggaaattgtatgatgtaga 220  Q
    | |||||||||||||| |||| |||||||| ||||    
T  6511902 gctacatatattatgtagaaaatgtatgatataga 6511868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 50160507 - 50160383
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||| ||||||||| ||| | |||||||||||||| ||| ||| | ||||  |||| ||| | ||||||||||||||||  |||||||||||||||||     
T  50160507 atagcaagtagagtggctcgcatcgcgagttactcattggcagtaa-ccttgtttagggttttggcgatctttgtcgcacgagatgttatgagttggtcc 50160409  T
Q  101 ttggggtaggaatggaagttgtttat 126  Q
    ||||||||||||||  ||||||||||    
T  50160408 ttggggtaggaatgatagttgtttat 50160383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 241
Target Start/End: Complemental strand, 9638185 - 9638089
Alignment:
Q  145 tgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    ||||||||||||||||||| | |||||||||   |||||||||||||||||||||||| | |||||||||| |||| |||||| ||| ||| |||||    
T  9638185 tgagtctgaattaatatgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcatt 9638089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 177
Target Start/End: Complemental strand, 18230084 - 18229996
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggt 177  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||  ||||| |||| ||| || |||||| |||  ||||||||||    
T  18230084 atgagttggtctttggggtaggaatgaaagttgtttataaaggtatagcctttcagtgaatctaaactaatataattgatgttgttggt 18229996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 26050251 - 26050378
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| |||| |||| | | |||||  || || ||||  |||| |||||||||||||||||||||||||| ||| ||||||| ||     
T  26050251 atagcgagtagagtggctcgcctcacgagctgcacagtgtcagacaaccttgtttagggttcttgcgatctttgtcgcacatgaggttttgagttgatcc 26050350  T
Q  101 ttggggtaggaatggaagttgtttataa 128  Q
    ||||| |||||||||| |||| ||||||    
T  26050351 ttgggttaggaatggaggttgattataa 26050378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 214
Target Start/End: Complemental strand, 13446876 - 13446752
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagat 188  Q
    ||||||||||||||||| |||||||| |||||| |||||||||||||  ||||| |||| ||| || | |||| |||  |||||||||| ||||  || |    
T  13446876 atgagttggtctttggg-taggaatgaaagttgattataaaggtatagcctttcagtgaatctaaactgatataattgatgttgttggttaattcaagct 13446778  T
Q  189 acatatattatgtggaaattgtatga 214  Q
    |||||||||||||| ||| |||||||    
T  13446777 acatatattatgtgaaaaatgtatga 13446752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 32466848 - 32466935
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgtt 88  Q
    ||||||||||||||| ||| |||||||||  ||||||||| ||||| ||||   ||| |||||||| ||||||||||||| |||||||    
T  32466848 atagcgagtagagtggctcgcctcgcgagccactcagtggcagtcaaccttgtgtagggttcttgctatctttgtcgcacgtgatgtt 32466935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 17333563 - 17333505
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttg 121  Q
    ||||||||||||||||||  |||||||||||||| || |||||||||||||||| ||||    
T  17333563 ttgcgatctttgtcgcacgagatgttatgagttgatccttggggtaggaatggaggttg 17333505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 32306771 - 32306897
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||||||||| | | ||| |  || |  ||||  |||| ||||||||||| ||||||||||  ||||||||||||||  |     
T  32306771 atagcgagtagagtggctcgcctcgcgagctgcacagagacagactaccttgtttagggttcttgcgatttttgtcgcacgagatgttatgagttgaccc 32306870  T
Q  101 ttggggtaggaatggaagttgtttata 127  Q
    |||||||||||||||| |||| |||||    
T  32306871 ttggggtaggaatggaggttgattata 32306897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 13591764 - 13591829
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataa 128  Q
    |||||||| |||||||||  |||||||| ||||| || |||||||||||||||| |||||||||||    
T  13591764 ttgcgatccttgtcgcacgagatgttattagttgatccttggggtaggaatggaggttgtttataa 13591829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 27996256 - 27996130
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    |||||||||||| || ||| ||||||||| | | |||||  || || ||||  |||| |||||||| ||||||||||||||    ||||||||||||||     
T  27996256 atagcgagtagaatggctcgcctcgcgagctgcacagtgacagacaaccttgtttagggttcttgcaatctttgtcgcacaaagagttatgagttggtcc 27996157  T
Q  101 ttggggtaggaatggaagttgtttataa 128  Q
    |||||||| |||  ||||||||||||||    
T  27996156 ttggggta-gaaacgaagttgtttataa 27996130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 40907416 - 40907297
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    |||||||||| |||| ||| ||||||||| | | |||||  || || ||||  |||| ||||||| ||||||||||||||  |||||||||||||| ||     
T  40907416 atagcgagtaaagtggctcgcctcgcgagctgcacagtgtcagacaaccttgtttagggttcttgtgatctttgtcgcacgagatgttatgagttgatcc 40907317  T
Q  101 ttggggtaggaatggaagtt 120  Q
    ||| | |||||||| |||||    
T  40907316 ttgtgctaggaatgaaagtt 40907297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 53631136 - 53631207
Alignment:
Q  170 ttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    |||||||  |||||||||||||||||||||||| | |||||||||| |||| |||||| ||| ||| |||||    
T  53631136 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcatt 53631207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 241
Target Start/End: Original strand, 16026628 - 16026690
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    |||||||||||||||||||||||| | |||||||||| |||| |||||| ||| ||| |||||    
T  16026628 aatttgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcatt 16026690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 128
Target Start/End: Complemental strand, 26789613 - 26789556
Alignment:
Q  71 tttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataa 128  Q
    |||||||||| ||| ||||||||||| || |||||||||||||||| |||| ||||||    
T  26789613 tttgtcgcacgtgaggttatgagttgatccttggggtaggaatggaggttgattataa 26789556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 19738591 - 19738465
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcac-atgatgttatgagttggtc 99  Q
    |||||||||||| ||  || ||||||||| | | |||||  || || ||||  |||| |||||||||||||||||||||| | || ||||||||||||||    
T  19738591 atagcgagtagaatggttcgcctcgcgagctgcacagtgacagacaaccttgtttagggttcttgcgatctttgtcgcacgaaga-gttatgagttggtc 19738493  T
Q  100 tttggggtaggaatggaagttgtttataa 128  Q
     |||||||| |||  ||||||||||||||    
T  19738492 cttggggta-gaaacgaagttgtttataa 19738465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 125
Target Start/End: Original strand, 54798627 - 54798663
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgttta 125  Q
    ||||||||||||||||||||||||||| |||||||||    
T  54798627 atgagttggtctttggggtaggaatggtagttgttta 54798663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 114
Target Start/End: Complemental strand, 14825751 - 14825700
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatg 114  Q
    |||||||| |||||||||  |||||||||||||| || ||||||||||||||    
T  14825751 ttgcgatccttgtcgcacgagatgttatgagttgatccttggggtaggaatg 14825700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 3485251 - 3485210
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  3485251 aatttgagatacatatattatgtgaatattgtatgatataga 3485210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 125
Target Start/End: Complemental strand, 14280557 - 14280524
Alignment:
Q  92 agttggtctttggggtaggaatggaagttgttta 125  Q
    |||||||||||||||||||||||| |||||||||    
T  14280557 agttggtctttggggtaggaatggtagttgttta 14280524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 128
Target Start/End: Complemental strand, 15792049 - 15791992
Alignment:
Q  71 tttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataa 128  Q
    |||||||||| ||| ||||||||||| || ||| |||||||||||| |||| ||||||    
T  15792049 tttgtcgcacgtgaggttatgagttgatcattgaggtaggaatggaggttgattataa 15791992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 125
Target Start/End: Original strand, 8574742 - 8574778
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgttta 125  Q
    |||||||||||||| |||||||||||| |||||||||    
T  8574742 atgagttggtctttagggtaggaatggtagttgttta 8574778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 14852713 - 14852777
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttata 127  Q
    ||||||||||||||||||  |||||||| |||||  | ||||||| |||||||| |||| |||||    
T  14852713 ttgcgatctttgtcgcacgagatgttataagttgacccttggggtgggaatggaggttgattata 14852777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 19734626 - 19734590
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgat 215  Q
    |||||||||||||||||||||||| | ||||||||||    
T  19734626 aatttgagatacatatattatgtgaatattgtatgat 19734590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1695 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold1695
Description:

Target: scaffold1695; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 874 - 634
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| |||||||||||||| | ||| ||||| ||||  |||| ||||||||||||||| |||||| | | ||| |||||||||||    
T  874 atagcgagtagagtggctcacctcgcgagttacttactggcagtcaaccttgtttagggttcttgcgatctttttcgcacgtaacgttctgagttggtct 775  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    |||||||||||||| ||||||||||| |   | |  |  ||| |||||||||||||| ||||| | ||||||||||  ||||||||||||||||||||||    
T  774 ttggggtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatg 675  T
Q  201 tggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    || | |||||||||| |||| |||||| ||| ||| |||||    
T  674 tgaatattgtatgatatagaaatattgttgttcatatcatt 634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 92; Significance: 8e-45; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 739 - 521
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||||||||| |||| ||||| ||| | ||||  |||| |||||||||||||||||||||| ||||||| |||||||||||    
T  739 atagcgagtagagtggctcgcctcgcgagctacttagtggcagttaaccttgtttagggttcttgcgatctttgtcgcacgtgatgttctgagttggtct 640  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    ||||| || ||||| |||||||||||||   ||   |  ||| |||||| |||||||| ||||||| |||||||||| |||||||| |||||||||||||    
T  639 ttgggataagaatgaaagttgtttataattatactgtggttcagtgagtttgaattaa-atgattaatgttgttggtaaatttgagctacatatattatg 541  T
Q  201 tggaaattgtatgatgtaga 220  Q
    |||||| |||||||| ||||    
T  540 tggaaaatgtatgatataga 521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 8994 - 8776
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||||||||| |||| ||||| ||| | ||||  |||| |||||||||||||||||||||| ||||||| |||||||||||    
T  8994 atagcgagtagagtggctcgcctcgcgagctacttagtggcagttaaccttgtttagggttcttgcgatctttgtcgcacgtgatgttctgagttggtct 8895  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatg 200  Q
    ||||| || ||||| |||||||||||||   ||   |  ||| |||||| |||||||| ||||||| |||||||||| |||||||| |||||||||||||    
T  8894 ttgggataagaatgaaagttgtttataattatactgtggttcagtgagtttgaattaa-atgattaatgttgttggtaaatttgagctacatatattatg 8796  T
Q  201 tggaaattgtatgatgtaga 220  Q
    |||||| |||||||| ||||    
T  8795 tggaaaatgtatgatataga 8776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0181 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 34018 - 34149
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagat 188  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||| |||| ||| || | |||| |||  |||||||||| |||||||| |    
T  34018 atgagttggtctttcgggtaggaatggaagttgtttataaaggtatagtctttcagtgaatctaaactgatataattgatgttgttggttaatttgagtt 34117  T
Q  189 acatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||| |||||||| ||||    
T  34118 acatatattatgtggaaaatgtatgatataga 34149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 30530 - 30409
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||||||||||| |||| ||| || || ||||  |||| |||||||||||||||||||||| ||||||| |||||||||||    
T  30530 atagcgagtagagtggctcgcctcgcgagttgctcattggcagacaaccttgtttagggttcttgcgatctttgtcgcacgtgatgttgtgagttggtct 30431  T
Q  101 ttggggtaggaatggaagttgt 122  Q
    ||||||||||||||||||||||    
T  30430 ttggggtaggaatggaagttgt 30409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 91 - 215
Target Start/End: Complemental strand, 11099 - 10975
Alignment:
Q  91 gagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatac 190  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||| |||| ||| || | |||| |||  |||||||||| |||||||| |||    
T  11099 gagttggtctttggggtaggaatggaagttgtttataaaggtatagcctttccgtgaatctaaactgatataattgatgttgttggttaatttgagttac 11000  T
Q  191 atatattatgtggaaattgtatgat 215  Q
    |||||||||||||||| ||||||||    
T  10999 atatattatgtggaaaatgtatgat 10975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 207
Target Start/End: Complemental strand, 28785 - 28584
Alignment:
Q  4 gcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgtta-tgagttggtcttt 102  Q
    |||||||||||| ||| | | | ||| |||| ||||| ||||| ||||  |||| ||||||||||||||| |||||  |||||  | |||||||||||||    
T  28785 gcgagtagagtggctcgctttgtgagctacttagtggcagtcaaccttgtttagggttcttgcgatctttatcgca--tgatgacaatgagttggtcttt 28688  T
Q  103 ggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtg 202  Q
    |||||||||||||||||||||||||||||| ||  ||||| | || ||| |||||| ||||||| |||||||||| ||| ||| ||||||||||||||||    
T  28687 ggggtaggaatggaagttgtttataaaggtttagcctttcagaga-tctaaattaaaatgattaatgttgttggttaatgtgaaatacatatattatgtg 28589  T
Q  203 gaaat 207  Q
     ||||    
T  28588 aaaat 28584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 177
Target Start/End: Original strand, 11369 - 11541
Alignment:
Q  5 cgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttgg 104  Q
    ||||||||||| ||| ||||||||| |||||||||| || || ||||  ||||  |||||||||| ||||||||||  ||||||||||||||||||||||    
T  11369 cgagtagagtggctcgcctcgcgagctactcagtggcagacaaccttgtttaggattcttgcgatatttgtcgcacgagatgttatgagttggtctttgg 11468  T
Q  105 ggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggt 177  Q
    ||||| |||| |||||||||||||   |||  |  ||| | ||||||||||||| ||||||| ||||||||||    
T  11469 ggtagaaatgaaagttgtttataatattattgttgttcagagagtctgaattaagatgattaatgttgttggt 11541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 95798 - 95674
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| |||||||||||||||||||| ||||| ||||  |||| |||||||||||| ||||||||| |||  ||||||||||||||    
T  95798 atagcgagtagagtggctcgcctcgcgagttactcagtggcagtcaaccttgtttagggttcttgcgatcattgtcgcacgtgagcttatgagttggtct 95699  T
Q  101 ttggggtaggaatggaagttgttta 125  Q
    ||||| |||||||  ||||||||||    
T  95698 ttgggataggaatcaaagttgttta 95674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2046 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold2046
Description:

Target: scaffold2046; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 535 - 404
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagat 188  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||  ||||| || | ||| || |||||| |||  |||||||||| ||||| || |    
T  535 atgagttggtcttaggggtaggaatggaagttgtttataaaggtatagcctttcagttaatctaaactaatataattgatgttgttggttaatttaagct 436  T
Q  189 acatatattatgtggaaattgtatgatgtaga 220  Q
    | |||||||||||||||| |||||||| ||||    
T  435 atatatattatgtggaaaatgtatgatataga 404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 3460 - 3329
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagat 188  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||  ||||  |||| ||| ||||||||| |||   ||||||||| ||||| || |    
T  3460 atgagttggtcgttggggtaggaatgaaagttgtttataaaggtatagccttttagtgaatctaaattaatataattgacgttgttggttaatttaagct 3361  T
Q  189 acatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||| |||||||| ||||    
T  3360 acatatattatgtggaaaatgtatgatataga 3329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 7045 - 6914
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagat 188  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||  ||||| |||| | | |  |||||| |||  |||||||||| ||||| || |    
T  7045 atgagttggtccttggggtaggaatggaagttgtttataaaggtatagcctttcagtgaatttaagctaatataattgatgttgttggttaatttaagct 6946  T
Q  189 acatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||| |||||||| ||||    
T  6945 acatatattatgtggaaaatgtatgatataga 6914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 4193 - 3953
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    |||||||||||  |  ||| |||||||||||||||| | |  |||||||||  || |||||||||||  ||||||||| | ||  ||| ||||||||||     
T  4193 atagcgagtagcctagctcgcctcgcgagttactcaatcgctgtcagccttgtttggtgttcttgcgtcctttgtcgcgcgtgtagttctgagttggtc- 4095  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctg-aattaatatgattattgttgttggtcaatttgagatacatatattat 199  Q
    |||||||||||||| |||||| ||||||  || |   ||| | ||||||| | || |||||||| ||||||||||||  ||||||| |||||||||||||    
T  4094 ttggggtaggaatgaaagttgcttataattgtgttgccttgcagtgagtcagaaagtaatatgaatattgttgttggataatttgaaatacatatattat 3995  T
Q  200 gtggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    ||| | |||||||| ||||||||||||| ||| ||| |||||    
T  3994 gtgaatattgtatgttgtagagatattgttgttcatatcatt 3953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 120 - 226
Target Start/End: Complemental strand, 960 - 854
Alignment:
Q  120 tgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtag 219  Q
    |||||||||| ||||  |||||| |||||||||||||||||||| |||||||||||   |||||||||||||||||||||||| | |||||||||| |||    
T  960 tgtttataaatgtattgtctttcagtgagtctgaattaatatgaatattgttgttgaataatttgagatacatatattatgtgaatattgtatgatatag 861  T
Q  220 agatatt 226  Q
    | |||||    
T  860 aaatatt 854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 85 - 227
Target Start/End: Original strand, 83 - 225
Alignment:
Q  85 tgttatgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttg 184  Q
    |||| ||||||||||||||||||||||  | || |||| |||||  ||||  |||| | |||||||||||||||||||| ||||||||||||  || ||     
T  83 tgttttgagttggtctttggggtaggatcgaaaattgtatataattgtattgtcttacagtgagtctgaattaatatgaatattgttgttggataaattt 182  T
Q  185 agatacatatattatgtggaaattgtatgatgtagagatattg 227  Q
    | |||||| |||||||||||||||||||| |||||| ||||||    
T  183 aaatacatctattatgtggaaattgtatgttgtagaaatattg 225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 128
Target Start/End: Original strand, 12676 - 12802
Alignment:
Q  2 tagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctt 101  Q
    |||||||||||||| ||| ||||||||||||  ||||||||| |  ||||  |||| |||||||| |||||||||||||  || |||||||||||||| |    
T  12676 tagcgagtagagtggctcgcctcgcgagttatacagtggtagactaccttgtttagggttcttgctatctttgtcgcacgagaggttatgagttggtcct 12775  T
Q  102 tggggtaggaatggaagttgtttataa 128  Q
    |||||||||||||  ||||||||||||    
T  12776 tggggtaggaatgagagttgtttataa 12802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 150
Target Start/End: Complemental strand, 4125 - 4064
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtc 150  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||  ||||| |||||||    
T  4125 atgagttggtccttggggtaggaatggaagttgtttataaaggtatagcctttcagtgagtc 4064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 542 - 675
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||||||||| |||||||||| ||||| ||||  |||| |||||||||||||||||||||| ||| ||| ||||||| ||     
T  542 atagcgagtagagtggctcgcctcgcgagctactcagtggcagtcaaccttgtttagggttcttgcgatctttgtcgcacgtgaagttgtgagttgatc- 640  T
Q  101 ttggggtaggaatggaagttgtttataaaggtata 135  Q
    ||||| |||||||| ||||| ||||| ||| ||||    
T  641 ttgggataggaatgaaagttatttattaagttata 675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 17847 - 17721
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||||||||| | | |||||  || |||||||  |||| ||||||||||||||||||||||  |||||||||||||| ||     
T  17847 atagcgagtagagtggctcgcctcgcgagctgcacagtgtcaggcagccttgtttagagttcttgcgatctttgtcgcacgagatgttatgagttgatcc 17748  T
Q  101 ttggggtaggaatggaagttgtttata 127  Q
    |||||||||||||||| |||| |||||    
T  17747 ttggggtaggaatggaggttgattata 17721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 120 - 226
Target Start/End: Original strand, 187308 - 187414
Alignment:
Q  120 tgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtag 219  Q
    |||||||||| ||||  |||||| |||||||||||||||||||| |||||||||||   |||||||||||||||||||||||| | |||||||||| |||    
T  187308 tgtttataaatgtattgtctttcagtgagtctgaattaatatgaatattgttgttgaataatttgagatacatatattatgtgaatattgtatgatatag 187407  T
Q  220 agatatt 226  Q
    | |||||    
T  187408 aaatatt 187414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 114
Target Start/End: Original strand, 13958 - 14009
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatg 114  Q
    |||||||| |||||||||  |||||||||||||| || ||||||||||||||    
T  13958 ttgcgatccttgtcgcacgagatgttatgagttgatccttggggtaggaatg 14009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 220
Target Start/End: Complemental strand, 19219 - 19006
Alignment:
Q  7 agtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttgggg 106  Q
    ||||||||| ||| |||||||||||  ||||||| |||||||| || || | ||||||||| ||||| |||||| ||  ||| |||||||||||||||||    
T  19219 agtagagtggctcgcctcgcgagttgttcagtggcagtcagccctatttcgcgttcttgcgttctttttcgcacgtgtcgttctgagttggtctttgggg 19120  T
Q  107 taggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtggaaa 206  Q
    |||||||  ||||||  |||||| |||   | ||   ||||  |||||||||||||| |||||| |||||  || |||| || | ||||||||||||| |    
T  19119 taggaatcaaagttgcatataaatgtactgttttatagtgaacctgaattaatatgaatattgtggttggataaattgaaatgcgtatattatgtggata 19020  T
Q  207 ttgtatgatgtaga 220  Q
    ||||||| ||||||    
T  19019 ttgtatgttgtaga 19006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 226
Target Start/End: Complemental strand, 16978 - 16891
Alignment:
Q  139 tttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtagagatatt 226  Q
    |||| ||||||| |||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||| |||| |||| |||||    
T  16978 tttcagtgagtcggaattaatatgattattgttgttggataatttgagatacatatattatgtgaaaattgtttgatatagaaatatt 16891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 3225 - 3105
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| |||||||||| || |||||| ||||| ||||  |||| |||||||||||||||||||||||||||||| |||||| | |     
T  3225 atagcgagtagagtggctcacctcgcgagt-acccagtggcagtcaaccttgtttagggttcttgcgatctttgtcgcacatgatgttgtgagtt-gacc 3128  T
Q  101 ttggggtaggaatggaagttgtt 123  Q
    ||||| ||| |||||||||||||    
T  3127 ttgggatagaaatggaagttgtt 3105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 55522 - 55586
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttata 127  Q
    ||||||||||||||||||  ||||||||||||||  | |||||||||||||||| |||| |||||    
T  55522 ttgcgatctttgtcgcacgagatgttatgagttgacccttggggtaggaatggaggttgattata 55586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 33690 - 33649
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  33690 aatttgagatacatatattatgtgaatattgtatgatataga 33649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 177
Target Start/End: Original strand, 1903 - 1991
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggt 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||| ||| || |||||| |||  ||||||||||    
T  1903 atgagttggtctttggggtaggaatggaagttgtttataaaggtatagcctttcagtgaatctaaactaatataattgatgttgttggt 1991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 820 - 762
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttg 121  Q
    ||||||||||||| ||||  ||| |||||||||| || |||||||||||||||| ||||    
T  820 ttgcgatctttgttgcacgagattttatgagttgatccttggggtaggaatggaggttg 762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 2617 - 2748
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagat 188  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||| | ||| |||| ||| |  ||||||  ||  |||| ||||| ||||| || |    
T  2617 atgagttggtccttggggtaggaatggatgttgtttataaaggtataaccattcagtgaatctaagctaatatatttgatgttcttggtaaatttaagct 2716  T
Q  189 acatatattatgtggaaattgtatgatgtaga 220  Q
    | |||||||||||||||| |||||||| ||||    
T  2717 atatatattatgtggaaaatgtatgatataga 2748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 6331 - 6200
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagat 188  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||  || || |||| ||| |  |||||| |||  |||||||||| ||||| || |    
T  6331 atgagttggtccttggggttggaatggaagttgtttataaaggtatagcctctcagtgaatctaagctaatataattgatgttgttggttaatttaagct 6232  T
Q  189 acatatattatgtggaaattgtatgatgtaga 220  Q
    | |||| ||||||||||| |||||||| ||||    
T  6231 atatattttatgtggaaaatgtatgatataga 6200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 8483 - 8352
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagat 188  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||  || || |||| ||| |  |||||| |||  |||||||||| ||||| || |    
T  8483 atgagttggtccttggggttggaatggaagttgtttataaaggtatagcctctcagtgaatctaagctaatataattgatgttgttggttaatttaagct 8384  T
Q  189 acatatattatgtggaaattgtatgatgtaga 220  Q
    | |||| ||||||||||| |||||||| ||||    
T  8383 atatattttatgtggaaaatgtatgatataga 8352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 241
Target Start/End: Complemental strand, 7736 - 7615
Alignment:
Q  120 tgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtag 219  Q
    |||||||||  ||||  |||||| |||||||||||||||||||| | |||||||||   |||| ||||||||||||||||||| | |||||||||| |||    
T  7736 tgtttataattgtattgtctttcagtgagtctgaattaatatgaatgttgttgttgaataattcgagatacatatattatgtgaatattgtatgatatag 7637  T
Q  220 agatattgatgtccatctcatt 241  Q
    | |||||| ||| ||| |||||    
T  7636 aaatattgttgttcatatcatt 7615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 50; Significance: 1e-19; HSPs: 4)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 212
Target Start/End: Complemental strand, 4938 - 4845
Alignment:
Q  119 ttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtggaaattgtat 212  Q
    ||||||||||  ||||  |||||| |||||||||||||||||||| | ||||||||| | |||||||||||||||||||||||| | |||||||    
T  4938 ttgtttataattgtattgtctttcagtgagtctgaattaatatgaatgttgttgttgattaatttgagatacatatattatgtgaatattgtat 4845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 241
Target Start/End: Complemental strand, 1760 - 1663
Alignment:
Q  144 gtgagtctgaattaatatgattattgttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    |||||||||||||||||||| | |||||||||   ||||||||||||||||| |||||| | |||||||||| |||| |||||| ||| ||| |||||    
T  1760 gtgagtctgaattaatatgaatgttgttgttgaataatttgagatacatatactatgtgaatattgtatgatatagaaatattgttgttcatatcatt 1663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 241
Target Start/End: Complemental strand, 5068 - 5006
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    |||||||||||||||||||||||| | |||||||||| |||| |||||| ||| ||| |||||    
T  5068 aatttgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcatt 5006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 241
Target Start/End: Complemental strand, 1915 - 1853
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    ||||||||||||||||||| |||| | |||||||||| |||| |||||| ||| ||| |||||    
T  1915 aatttgagatacatatattgtgtgaatattgtatgatatagaaatattgttgttcatatcatt 1853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 1391 - 1216
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    |||||||| |||||| ||  ||||||||| |||||||||  || || ||||  |||| |||||||||||| |||||| ||  |||||||||||||||||     
T  1391 atagcgagcagagtgactagcctcgcgagctactcagtgacagacaaccttg-ttagggttcttgcgatcgttgtcgtacgagatgttatgagttggtcc 1293  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggt 177  Q
    |||||||||||||| |||||||| | ||   |||  |  ||| | ||||||||||||| ||||||| ||||||||||    
T  1292 ttggggtaggaatgaaagttgttcaaaatattattgttgttcagagagtctgaattaagatgattaatgttgttggt 1216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 40852 - 40983
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagat 188  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||  || || || | | | || |||||| |||  |||||||||| ||||| || |    
T  40852 atgagttggtccttggggtaggaatggaagttgtttataaaagtatagcctctcagtcaatataaactaatataattgatgttgttggttaatttaagct 40951  T
Q  189 acatatattatgtggaaattgtatgatgtaga 220  Q
    | |||| ||||||||||| |||||||| ||||    
T  40952 atatattttatgtggaaaatgtatgatataga 40983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 3303 - 3172
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagat 188  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||   |||| |||| ||| |  |||||| |||  || ||||||| ||||| || |    
T  3303 atgagttggtccttggggtaggaatggaagttgattataaaggtatagcttttcagtgaatctaagctaatataattgatgatgttggttaatttaagct 3204  T
Q  189 acatatattatgtggaaattgtatgatgtaga 220  Q
    | |||||||||| ||||| |||||||| ||||    
T  3203 atatatattatggggaaaatgtatgatataga 3172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 9922 - 9980
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttg 121  Q
    ||||||||||||||||||  |||||||||||||| || |||||||||||||||| ||||    
T  9922 ttgcgatctttgtcgcacgagatgttatgagttgatccttggggtaggaatggaggttg 9980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 8525 - 8398
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||||||||||| | |||||  || || ||||  |||| ||||||||||||||||||||||  |||| | ||||||| ||     
T  8525 atagcgagtagagtgcctcgcctcgcgagttgcacagtgtcagacatccttgtttagggttcttgcgatctttgtcgcacgagatgatgtgagttgatcc 8426  T
Q  101 ttggggtaggaatggaagttgtttataa 128  Q
     ||||||||||||||| |||| ||||||    
T  8425 gtggggtaggaatggaggttgcttataa 8398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 135
Target Start/End: Complemental strand, 3781 - 3649
Alignment:
Q  4 gcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctt-t 102  Q
    |||||||| ||| ||| ||||||||| |||||||||| ||||| ||||  ||||  ||||||| ||||||||||||| ||||||| ||||||| ||||      
T  3781 gcgagtagtgtggctcgcctcgcgagctactcagtggcagtcaaccttgtttaggattcttgcaatctttgtcgcacgtgatgttgtgagttgatcttgc 3682  T
Q  103 ggggtaggaatggaagttgtttataaaggtata 135  Q
    | | |||||||| ||||||||||| ||| ||||    
T  3681 gcgataggaatgaaagttgtttattaagttata 3649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 92 - 220
Target Start/End: Complemental strand, 5246 - 5118
Alignment:
Q  92 agttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagataca 191  Q
    |||||||| |||||||||||||||||||||||||||||||||||  || |  |||| ||| |  |||||| |||   ||||||||| ||||| || || |    
T  5246 agttggtccttggggtaggaatggaagttgtttataaaggtatagcctcttagtgaatctaagctaatataattgacgttgttggttaatttaagctata 5147  T
Q  192 tatattatgtggaaattgtatgatgtaga 220  Q
    ||| ||||||||||| |||||||| ||||    
T  5146 tattttatgtggaaaatgtatgatataga 5118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 17943 - 18069
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||||||||| | | |||||  || || ||||  |||| |||  ||||||||||||||| |  |||||||||||||| ||     
T  17943 atagcgagtagagtgcctcgcctcgcgagctgcacagtgtcagacaaccttgtttagggtttctgcgatctttgtcgcccgagatgttatgagttgatcc 18042  T
Q  101 ttggggtaggaatggaagttgtttata 127  Q
    |||||||||||||||| |||| |||||    
T  18043 ttggggtaggaatggaggttgattata 18069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 3521 - 3395
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    |||| |||||||||| ||| ||||||||| | | |||||  || |||||||  |||| ||| |||||||||||||||| |  |||||||||||||| ||     
T  3521 atagtgagtagagtgcctcgcctcgcgagctgcacagtgtcagacagccttgtttagggtttttgcgatctttgtcgcccgagatgttatgagttgatcc 3422  T
Q  101 ttggggtaggaatggaagttgtttata 127  Q
    || ||||||||||||| |||| |||||    
T  3421 ttagggtaggaatggaggttgattata 3395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 22590 - 22462
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||||||||| | | || ||  || || | ||  |||||||||| ||||||||||||||||  ||||||||||| || ||     
T  22590 atagcgagtagagtggctcacctcgcgagctgcacaatgacagacaacattgtttagtgttctagcgatctttgtcgcacgagatgttatgagctgatcc 22491  T
Q  101 ttggggtaggaatggaagttgtttataaa 129  Q
    |||||||||||||| | |||| |||||||    
T  22490 ttggggtaggaatgaaggttggttataaa 22462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 54 - 129
Target Start/End: Complemental strand, 11437 - 11362
Alignment:
Q  54 ttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataaa 129  Q
    |||||||||| ||||||||||||||||  ||||||||||| || || |||||||||||||| | |||| |||||||    
T  11437 ttagtgttctagcgatctttgtcgcacgagatgttatgagctgatccttggggtaggaatgaaggttggttataaa 11362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 4394 - 4516
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    ||||||||||||||| ||| ||||||||| | | |||||  || || ||||  || | |||||||||||||||||||||||    ||||| ||||||||     
T  4394 atagcgagtagagtggctcgcctcgcgagctgcacagtgtcagacaaccttgttttgggttcttgcgatctttgtcgcacaaagagttatcagttggtcc 4493  T
Q  101 ttggggtaggaatggaagttgtt 123  Q
    ||||||||||||||  |||||||    
T  4494 ttggggtaggaatgagagttgtt 4516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 14441 - 14514
Alignment:
Q  54 ttagtgttcttgcgatctttgtcgcac-atgatgttatgagttggtctttggggtaggaatggaagttgtttata 127  Q
    |||| |||||||||||||||||||||| | || |||||||||||||| ||||||||||||||  |||||||||||    
T  14441 ttagggttcttgcgatctttgtcgcacgaaga-gttatgagttggtccttggggtaggaatgagagttgtttata 14514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 24435 - 24493
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttg 121  Q
    ||||||||||||||||||  |||||||||||||| || |||||||||||||||| ||||    
T  24435 ttgcgatctttgtcgcacgagatgttatgagttgatccttggggtaggaatggaggttg 24493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2080 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold2080
Description:

Target: scaffold2080; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 598 - 663
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataa 128  Q
    ||||||| |||||||||| ||| ||||||||||| || |||||||||||||||| |||| ||||||    
T  598 ttgcgatttttgtcgcacgtgaggttatgagttgatccttggggtaggaatggaggttgattataa 663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 8 - 134
Alignment:
Q  90 tgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtct----gaattaatatgattattgttgttggtcaatttga 185  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||||  |||||   || |||     ||||||||| |||  |||||||||| ||||  |    
T  8 tgagttggtttttggggtaagaatgggagttgtttataaaggtatagcctttcaaggaatctaagctaattaatataattgatgttgttggttaattcaa 107  T
Q  186 gatacatatattatgtggaaattgtat 212  Q
    | ||||||||||||||||||| |||||    
T  108 gctacatatattatgtggaaaatgtat 134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 29261 - 29325
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttata 127  Q
    ||||||||||||||||||  ||||||||||||||  | |||||||||||||||| |||| |||||    
T  29261 ttgcgatctttgtcgcacgagatgttatgagttgacccttggggtaggaatggaggttgattata 29325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 19484 - 19548
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttata 127  Q
    ||||||||||||||||||  |||||||||||||  || |||||||||||||||| |||| |||||    
T  19484 ttgcgatctttgtcgcacgagatgttatgagttaatcattggggtaggaatggaggttgattata 19548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 1130 - 1201
Alignment:
Q  170 ttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    |||||||  |||||||||||||||||||||||| | |||||||||| |||| |||||| ||| ||| |||||    
T  1130 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcatt 1201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 220
Target Start/End: Original strand, 264 - 395
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgtttataaaggtataatctttcggtgagtctgaattaatatgattattgttgttggtcaatttgagat 188  Q
    ||||||||||| || || ||||||||||||||||||||||| |||||  || || || | | | || |||||| |||  |||||||||| ||||| || |    
T  264 atgagttggtccttaggataggaatggaagttgtttataaaagtatagcctctcagtcaatataaactaatataattgatgttgttggttaatttaagct 363  T
Q  189 acatatattatgtggaaattgtatgatgtaga 220  Q
    | |||| ||||||| ||| |||||||| ||||    
T  364 atatattttatgtgaaaaatgtatgatataga 395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 114
Target Start/End: Complemental strand, 14593 - 14538
Alignment:
Q  60 ttcttgcgatcttt-gtcgcacatgatgttatgagttggtctttggggtaggaatg 114  Q
    |||||||||||||| ||||||||||||||||||||||| || || |||||||||||    
T  14593 ttcttgcgatcttttgtcgcacatgatgttatgagttgatccttagggtaggaatg 14538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 53176 - 53309
Alignment:
Q  1 atagcgagtagagtgtctctcctcgcgagttactcagtggtagtcagccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtct 100  Q
    |||| |||||||||| ||| || |||||| |||||| ||| ||||| ||||  |||| |||||||| |||||||||  || ||||||| ||||||| ||     
T  53176 atagtgagtagagtggctcgccacgcgagctactcaatggcagtca-ccttgtttagggttcttgcaatctttgtcaaacgtgatgttgtgagttgatcc 53274  T
Q  101 ttggggtaggaatggaagttgtttataaaggtataa 136  Q
    | ||| |||||||| ||||||||||| ||| |||||    
T  53275 t-gggataggaatgaaagttgtttatcaagttataa 53309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 15249 - 15320
Alignment:
Q  170 ttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    |||||||  |||||||||||||||||||||||| | |||||||||| |||| |||||| ||| ||| |||||    
T  15249 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcatt 15320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 241
Target Start/End: Original strand, 24307 - 24378
Alignment:
Q  170 ttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    |||||||  |||||||||||||||||||||||| | |||||||||| |||| |||||| ||| ||| |||||    
T  24307 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcatt 24378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 3165 - 3223
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttg 121  Q
    |||| |||||||||||||  |||||||||||||| || |||||||||||||||| ||||    
T  3165 ttgcaatctttgtcgcacgagatgttatgagttgatccttggggtaggaatggaggttg 3223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 2265 - 2322
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttg 121  Q
    |||| |||||||||||| | ||||||||||||||||| |||||||||||||||| ||||    
T  2265 ttgcaatctttgtcgcaga-gatgttatgagttggtccttggggtaggaatggaggttg 2322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 128
Target Start/End: Complemental strand, 10443 - 10369
Alignment:
Q  54 ttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataa 128  Q
    |||| ||||||| |||||||||||||| ||| ||||||||||| || |||| |||||||| || |||| ||||||    
T  10443 ttagggttcttgtgatctttgtcgcacgtgaggttatgagttgatccttggtgtaggaatagaggttgattataa 10369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0356 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 499 - 557
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttg 121  Q
    ||||||||||||||||||  ||||||| |||||| || |||||||||||||||| ||||    
T  499 ttgcgatctttgtcgcacgagatgttacgagttgatccttggggtaggaatggaggttg 557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 8410 - 8352
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttg 121  Q
    ||||||||||||||||||  |||||||||||||  || |||||||||||||||| ||||    
T  8410 ttgcgatctttgtcgcacgagatgttatgagttaatccttggggtaggaatggaggttg 8352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 135
Target Start/End: Complemental strand, 17860 - 17791
Alignment:
Q  65 gcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataaaggtata 135  Q
    |||||||| ||||||| ||||||| ||||||| |||| ||  |||||||||||||||||||||||| ||||    
T  17860 gcgatcttcgtcgcacgtgatgttgtgagttgatctt-ggcataggaatggaagttgtttataaagttata 17791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 121
Target Start/End: Original strand, 4538 - 4592
Alignment:
Q  67 gatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttg 121  Q
    ||||||||||||||  |||||||||||||| || |||||||||||||||| ||||    
T  4538 gatctttgtcgcacgagatgttatgagttgatccttggggtaggaatggaggttg 4592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 121
Target Start/End: Complemental strand, 85828 - 85770
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttg 121  Q
    ||||||||||||||||||  ||||||| |||||| || |||||||||||||||| ||||    
T  85828 ttgcgatctttgtcgcacgagatgttacgagttgatccttggggtaggaatggaggttg 85770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0750 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 3878 - 3813
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataa 128  Q
    |||||||||||||| |||  |||||||||||||| || ||| |||||||||||| |||| ||||||    
T  3878 ttgcgatctttgtcacacgagatgttatgagttgatccttgaggtaggaatggaggttgattataa 3813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 146085 - 146032
Alignment:
Q  167 ttgttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    ||||||||| | |||||||||||||||||||||||| | |||||||||| ||||    
T  146085 ttgttgttgattaatttgagatacatatattatgtgaatattgtatgatataga 146032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 75651 - 75731
Alignment:
Q  48 ccttacttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttataa 128  Q
    ||||| |||| |||||||||||  |||||||||   ||||||||||||| || |||||||||||||| | |||| ||||||    
T  75651 ccttatttagggttcttgcgattcttgtcgcacgatatgttatgagttgatccttggggtaggaatgaaggttggttataa 75731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 125
Target Start/End: Complemental strand, 116673 - 116637
Alignment:
Q  89 atgagttggtctttggggtaggaatggaagttgttta 125  Q
    ||||||||||||||||||||||||||| |||||||||    
T  116673 atgagttggtctttggggtaggaatggtagttgttta 116637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 3808 - 3737
Alignment:
Q  170 ttgttggtcaatttgagatacatatattatgtggaaattgtatgatgtagagatattgatgtccatctcatt 241  Q
    |||||||  ||||||| |||||||||||||||| | |||||||||| |||| |||||| ||| ||| |||||    
T  3808 ttgttggataatttgaaatacatatattatgtgaatattgtatgatatagaaatattgttgttcatatcatt 3737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 114
Target Start/End: Complemental strand, 22561 - 22510
Alignment:
Q  63 ttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatg 114  Q
    |||||||| |||||||||  |||||||||||||| || ||||||||||||||    
T  22561 ttgcgatccttgtcgcacgagatgttatgagttgatccttggggtaggaatg 22510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 10641 - 10692
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtagagatattgatg 230  Q
    |||||||||||||||||||||||| | |||||||||| |||| ||| |||||    
T  10641 aatttgagatacatatattatgtgaatattgtatgatatagaaataatgatg 10692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 121
Target Start/End: Complemental strand, 2973 - 2919
Alignment:
Q  67 gatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttg 121  Q
    ||||||||||||||  |||||||||| ||| || |||||||||||||||| ||||    
T  2973 gatctttgtcgcacgagatgttatgaattgatccttggggtaggaatggaggttg 2919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 548 - 507
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  548 aatttgagatacatatattatgtgaatattgtatgatataga 507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 5998 - 6039
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  5998 aatttgagatacatatattatgtgaatattgtatgatataga 6039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 6893 - 6852
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  6893 aatttgagatacatatattatgtgaatattgtatgatataga 6852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 3650 - 3609
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  3650 aatttgagatacatatattatgtgaatattgtatgatataga 3609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 15221 - 15262
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  15221 aatttgagatacatatattatgtgaatattgtatgatataga 15262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 29950 - 29909
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  29950 aatttgagatacatatattatgtgaatattgtatgatataga 29909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 22398 - 22357
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  22398 aatttgagatacatatattatgtgaatattgtatgatataga 22357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 29498 - 29457
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  29498 aatttgagatacatatattatgtgaatattgtatgatataga 29457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 21032 - 20991
Alignment:
Q  179 aatttgagatacatatattatgtggaaattgtatgatgtaga 220  Q
    |||||||||||||||||||||||| | |||||||||| ||||    
T  21032 aatttgagatacatatattatgtgaatattgtatgatataga 20991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 221036 - 221109
Alignment:
Q  54 ttagtgttcttgcgatctttgtcgcacatgatgttatgagttggtctttggggtaggaatggaagttgtttata 127  Q
    |||| ||||||||||| |||||||||||||| ||| |||||||  | || |||||||||| || |||| |||||    
T  221036 ttagggttcttgcgatttttgtcgcacatgaggttttgagttgacccttcgggtaggaatagaggttgattata 221109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University