View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8949_low_22 (Length: 460)
Name: NF8949_low_22
Description: NF8949
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8949_low_22 |
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Alignment Details
Target: chr8 (Bit Score: 417; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 417; E-Value: 0
Query Start/End: Original strand, 17 - 445
Target Start/End: Original strand, 32265516 - 32265944
Alignment:
| Q |
17 |
agcataggaggttgcaattggctcattgcctatggtctgaaacagatataaaccatgttagagagagtgcaaccattgttgcaaagctggttggtacagt |
116 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32265516 |
agcataggaggttgcaattggctcatcgcctatggtctgaaacagatataaaccatgttagagagagtgcaaccattgttgcaaagctggttggtacagt |
32265615 |
T |
|
| Q |
117 |
tgagcctgatcaggctttcaaggagatgtttggcctcaactttgcaccacgacgcagaagaaagaagtcgttcggttggacgtccagtatgaagcatatc |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32265616 |
tgagcctgatcaggctttcaaggagatgtttggcctcaactttgcaccacgacgcagaagaaagaagtcgttcggttggacgtccagtatgaagcatatc |
32265715 |
T |
|
| Q |
217 |
ttgtgaaggtgattgtgttggaacaagattactgtataggaagtttgattgggccatgtaaaaatttcccctggctccattttaacataggaaaaatatg |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32265716 |
ttgtgaaggtgattgtgttggaacaagattactgtataggaagtttgattgggccatgtaaaaatttcccctggctccattttaacataggaaaaatatg |
32265815 |
T |
|
| Q |
317 |
tcatccccccttctattaacaatctgatctttactatatgtttctgactctaattcctatttgactgtaaagaggttgaaggatgcagaaccatcccatg |
416 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
32265816 |
tcatccccccttctattagcaatctgatctttactatatgtttctgactctaattcctatttgactgtaaagaggttgaaggatgcagaaccaccccatg |
32265915 |
T |
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| Q |
417 |
catatggaatatagatggaactagaaatt |
445 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
32265916 |
catatggaatatagatggaactagaaatt |
32265944 |
T |
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