View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8949_low_25 (Length: 419)

Name: NF8949_low_25
Description: NF8949
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8949_low_25
NF8949_low_25
[»] chr2 (25 HSPs)
chr2 (126-340)||(17209792-17210007)
chr2 (58-275)||(17206436-17206658)
chr2 (345-406)||(21936085-21936146)
chr2 (339-405)||(13354844-13354910)
chr2 (337-406)||(23268062-23268131)
chr2 (339-406)||(9293576-9293643)
chr2 (340-406)||(35160756-35160822)
chr2 (332-406)||(43330903-43330977)
chr2 (345-406)||(10661891-10661952)
chr2 (345-406)||(31174834-31174895)
chr2 (340-406)||(7475508-7475574)
chr2 (340-406)||(14941366-14941432)
chr2 (18-64)||(21231526-21231572)
chr2 (345-406)||(33380211-33380272)
chr2 (353-406)||(22591494-22591547)
chr2 (345-406)||(21393688-21393749)
chr2 (339-406)||(27847630-27847697)
chr2 (345-406)||(7475307-7475367)
chr2 (345-406)||(9723409-9723470)
chr2 (345-406)||(22592918-22592979)
chr2 (345-406)||(33380413-33380473)
chr2 (345-406)||(35160965-35161025)
chr2 (369-406)||(3989104-3989141)
chr2 (345-406)||(10662094-10662154)
chr2 (345-378)||(40262714-40262747)
[»] chr8 (47 HSPs)
chr8 (338-405)||(15187557-15187624)
chr8 (334-406)||(42755042-42755114)
chr8 (339-406)||(32064743-32064810)
chr8 (345-406)||(34665386-34665447)
chr8 (338-406)||(37986055-37986123)
chr8 (339-406)||(17841850-17841917)
chr8 (339-406)||(40780129-40780196)
chr8 (345-406)||(20091801-20091862)
chr8 (345-406)||(24211553-24211614)
chr8 (337-406)||(26042116-26042185)
chr8 (345-406)||(32393862-32393923)
chr8 (349-406)||(38016979-38017036)
chr8 (339-406)||(1645965-1646032)
chr8 (345-406)||(14128868-14128929)
chr8 (345-406)||(35353045-35353106)
chr8 (351-406)||(7021988-7022043)
chr8 (339-406)||(31347782-31347849)
chr8 (339-406)||(39772801-39772868)
chr8 (340-406)||(41819778-41819844)
chr8 (345-406)||(3890413-3890474)
chr8 (345-406)||(8453838-8453899)
chr8 (338-406)||(7017865-7017933)
chr8 (339-406)||(6108233-6108300)
chr8 (345-406)||(27782117-27782178)
chr8 (345-406)||(37132658-37132719)
chr8 (346-406)||(25581239-25581299)
chr8 (345-406)||(30835047-30835107)
chr8 (345-406)||(1503642-1503702)
chr8 (345-406)||(3596840-3596900)
chr8 (345-406)||(17841649-17841709)
chr8 (345-406)||(26041912-26041972)
chr8 (345-406)||(27835453-27835514)
chr8 (345-406)||(40779928-40779988)
chr8 (339-391)||(24844873-24844925)
chr8 (353-404)||(1886621-1886672)
chr8 (352-406)||(35353247-35353300)
chr8 (369-406)||(3890616-3890653)
chr8 (345-406)||(6108032-6108092)
chr8 (345-406)||(10044554-10044614)
chr8 (345-406)||(14129065-14129125)
chr8 (345-406)||(20091600-20091660)
chr8 (345-406)||(31347575-31347635)
chr8 (345-406)||(34665587-34665647)
chr8 (345-406)||(37132479-37132540)
chr8 (345-406)||(37985855-37985915)
chr8 (369-405)||(3597042-3597078)
chr8 (345-385)||(30055547-30055587)
[»] chr1 (35 HSPs)
chr1 (339-406)||(16045798-16045865)
chr1 (338-406)||(19015401-19015469)
chr1 (336-406)||(36966708-36966778)
chr1 (345-406)||(37821834-37821895)
chr1 (345-406)||(40214992-40215053)
chr1 (345-406)||(9910293-9910354)
chr1 (345-406)||(44094702-44094763)
chr1 (339-406)||(18404440-18404507)
chr1 (339-406)||(25463674-25463741)
chr1 (345-406)||(3559621-3559682)
chr1 (335-406)||(25973408-25973478)
chr1 (340-406)||(41876442-41876508)
chr1 (345-406)||(6883491-6883552)
chr1 (345-404)||(32000269-32000328)
chr1 (339-406)||(40273700-40273767)
chr1 (345-406)||(19015610-19015670)
chr1 (345-406)||(27523054-27523115)
chr1 (353-406)||(44690828-44690881)
chr1 (345-406)||(51737711-51737771)
chr1 (345-403)||(6883696-6883753)
chr1 (339-406)||(27523255-27523324)
chr1 (340-378)||(34519757-34519795)
chr1 (340-378)||(51620979-51621017)
chr1 (345-403)||(52064376-52064434)
chr1 (353-406)||(9910098-9910150)
chr1 (345-406)||(20304929-20304989)
chr1 (345-406)||(25973613-25973673)
chr1 (345-406)||(32000065-32000125)
chr1 (345-406)||(33786430-33786490)
chr1 (345-406)||(33786635-33786695)
chr1 (345-406)||(37821633-37821693)
chr1 (345-406)||(40215194-40215254)
chr1 (345-406)||(40273914-40273974)
chr1 (345-406)||(41876241-41876301)
chr1 (352-405)||(44691030-44691083)
[»] chr7 (23 HSPs)
chr7 (337-406)||(45637708-45637777)
chr7 (340-406)||(15577850-15577916)
chr7 (345-406)||(4974735-4974796)
chr7 (345-406)||(42611815-42611876)
chr7 (339-406)||(15329271-15329338)
chr7 (345-406)||(48880927-48880988)
chr7 (345-404)||(24394976-24395035)
chr7 (340-406)||(35444557-35444623)
chr7 (345-406)||(3961983-3962044)
chr7 (345-406)||(34482839-34482900)
chr7 (338-406)||(37477080-37477148)
chr7 (345-406)||(25167850-25167911)
chr7 (341-406)||(29737139-29737204)
chr7 (345-405)||(36790467-36790527)
chr7 (340-406)||(18036977-18037043)
chr7 (345-391)||(20010112-20010158)
chr7 (345-406)||(15238386-15238447)
chr7 (345-406)||(25167655-25167715)
chr7 (345-406)||(35445603-35445663)
chr7 (337-406)||(42696079-42696148)
chr7 (345-406)||(48880726-48880786)
chr7 (369-406)||(30848597-30848634)
chr7 (345-406)||(30848775-30848835)
[»] chr4 (35 HSPs)
chr4 (334-406)||(22199254-22199326)
chr4 (339-406)||(10442789-10442856)
chr4 (335-406)||(31078819-31078890)
chr4 (336-406)||(2624832-2624902)
chr4 (345-406)||(49387888-49387949)
chr4 (338-406)||(36073347-36073415)
chr4 (339-406)||(21802322-21802389)
chr4 (339-406)||(24128237-24128304)
chr4 (345-404)||(36072951-36073010)
chr4 (339-406)||(47290064-47290131)
chr4 (340-406)||(33530688-33530754)
chr4 (345-406)||(7745112-7745173)
chr4 (340-404)||(4751445-4751509)
chr4 (339-406)||(24392665-24392732)
chr4 (339-406)||(44893424-44893491)
chr4 (339-406)||(23964465-23964532)
chr4 (339-406)||(50156578-50156645)
chr4 (340-406)||(53123029-53123096)
chr4 (345-406)||(46441848-46441909)
chr4 (340-403)||(37934944-37935007)
chr4 (347-406)||(42671675-42671734)
chr4 (340-406)||(44893213-44893280)
chr4 (345-406)||(25063373-25063434)
chr4 (369-406)||(9088898-9088935)
chr4 (345-406)||(9089076-9089136)
chr4 (345-406)||(36073555-36073615)
chr4 (353-406)||(37219837-37219890)
chr4 (345-406)||(46442050-46442110)
chr4 (345-406)||(53123237-53123297)
chr4 (345-406)||(10442586-10442646)
chr4 (345-406)||(11314050-11314111)
chr4 (373-406)||(17655462-17655495)
chr4 (345-406)||(31078618-31078678)
chr4 (353-406)||(42671874-42671927)
chr4 (345-406)||(47290272-47290332)
[»] chr6 (22 HSPs)
chr6 (340-406)||(33695327-33695393)
chr6 (340-406)||(33696695-33696761)
chr6 (338-406)||(6127272-6127340)
chr6 (339-406)||(18365573-18365640)
chr6 (339-406)||(18370837-18370904)
chr6 (339-406)||(23291084-23291151)
chr6 (339-406)||(28675146-28675213)
chr6 (345-406)||(17176021-17176082)
chr6 (345-406)||(17705465-17705526)
chr6 (340-405)||(18889698-18889762)
chr6 (345-406)||(25986934-25986995)
chr6 (339-406)||(11548588-11548655)
chr6 (352-406)||(32702216-32702270)
chr6 (345-406)||(6031741-6031802)
chr6 (345-406)||(8515725-8515786)
chr6 (339-406)||(9752245-9752311)
chr6 (345-405)||(29693652-29693712)
chr6 (337-406)||(2309423-2309492)
chr6 (353-406)||(582534-582588)
chr6 (345-406)||(34238886-34238946)
chr6 (345-405)||(23290880-23290939)
chr6 (345-405)||(32702412-32702471)
[»] chr3 (40 HSPs)
chr3 (345-406)||(3456068-3456129)
chr3 (337-406)||(3574527-3574596)
chr3 (345-406)||(48160909-48160970)
chr3 (339-406)||(2754715-2754782)
chr3 (339-406)||(34482910-34482977)
chr3 (339-405)||(11347266-11347332)
chr3 (345-406)||(6041888-6041949)
chr3 (345-406)||(37217053-37217114)
chr3 (338-406)||(33113790-33113858)
chr3 (339-406)||(3137414-3137481)
chr3 (345-406)||(8320584-8320645)
chr3 (345-406)||(30385015-30385076)
chr3 (345-406)||(9797029-9797090)
chr3 (345-406)||(19650900-19650961)
chr3 (338-406)||(24343544-24343612)
chr3 (353-405)||(47738117-47738169)
chr3 (339-406)||(37522051-37522118)
chr3 (340-391)||(42297352-42297403)
chr3 (340-406)||(22426344-22426410)
chr3 (345-406)||(33145717-33145777)
chr3 (340-406)||(36865027-36865093)
chr3 (347-402)||(41224239-41224294)
chr3 (352-391)||(42921154-42921193)
chr3 (350-404)||(26612794-26612848)
chr3 (345-406)||(3137213-3137273)
chr3 (345-406)||(8362045-8362106)
chr3 (345-406)||(34482687-34482747)
chr3 (345-378)||(40327879-40327912)
chr3 (345-406)||(40328037-40328098)
chr3 (335-372)||(47402630-47402667)
chr3 (353-406)||(47738317-47738370)
chr3 (350-406)||(33839741-33839797)
chr3 (339-406)||(33839529-33839596)
chr3 (345-406)||(22426144-22426204)
chr3 (345-406)||(30385606-30385666)
chr3 (345-406)||(33114000-33114060)
chr3 (345-406)||(36864831-36864892)
chr3 (345-406)||(41224440-41224500)
chr3 (369-406)||(41883223-41883260)
chr3 (353-406)||(46919100-46919153)
[»] chr5 (26 HSPs)
chr5 (338-406)||(6043511-6043579)
chr5 (339-406)||(2477634-2477701)
chr5 (339-406)||(8145373-8145440)
chr5 (345-406)||(4434007-4434068)
chr5 (345-406)||(11361131-11361192)
chr5 (337-406)||(14138664-14138733)
chr5 (340-404)||(3362777-3362841)
chr5 (340-404)||(38899728-38899792)
chr5 (339-406)||(4892200-4892267)
chr5 (345-406)||(22913054-22913115)
chr5 (345-406)||(25398242-25398303)
chr5 (345-406)||(33584329-33584390)
chr5 (345-404)||(12850805-12850864)
chr5 (345-406)||(37321793-37321855)
chr5 (345-406)||(3522006-3522067)
chr5 (345-406)||(17545685-17545746)
chr5 (353-406)||(10458409-10458462)
chr5 (345-406)||(12614733-12614794)
chr5 (344-396)||(27481829-27481881)
chr5 (345-406)||(4892408-4892468)
chr5 (345-406)||(33584128-33584188)
chr5 (345-404)||(12851010-12851068)
chr5 (345-404)||(38899524-38899583)
chr5 (345-406)||(8145579-8145639)
chr5 (345-406)||(22912856-22912916)
chr5 (345-406)||(37321592-37321652)
[»] scaffold0471 (1 HSPs)
scaffold0471 (339-406)||(12840-12907)
[»] scaffold0096 (1 HSPs)
scaffold0096 (339-406)||(41009-41076)
[»] scaffold0178 (1 HSPs)
scaffold0178 (345-406)||(11625-11686)
[»] scaffold0085 (1 HSPs)
scaffold0085 (345-406)||(47854-47915)
[»] scaffold0204 (2 HSPs)
scaffold0204 (339-406)||(4394-4461)
scaffold0204 (345-406)||(4602-4662)
[»] scaffold0228 (5 HSPs)
scaffold0228 (352-406)||(8413-8467)
scaffold0228 (352-406)||(15995-16049)
scaffold0228 (352-406)||(25947-26001)
scaffold0228 (345-406)||(16190-16250)
scaffold0228 (345-406)||(26142-26202)
[»] scaffold0665 (1 HSPs)
scaffold0665 (345-406)||(3072-3133)


Alignment Details
Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 126 - 340
Target Start/End: Original strand, 17209792 - 17210007
Alignment:
Q  126 tttatgtaagtctatggaaaagattaagggtcagtacaaatatgtatgcatttaattcatgttttcttggtaattattagttattaatgacgaaggttta 225  Q
    |||||||||||||||||| || |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17209792 tttatgtaagtctatggagaatattaagggtcggtacaaacatgtatgcatttaattcatgttttcttggtaattattagttattaatgacgaaggttta 17209891  T
Q  226 aaaactaaacacaatgcattattttctaattatgtattctgtaacctatagtttataacttgtaaatgtatcaaggtaag-aaaaaataaagagaaactt 324  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17209892 aaaactaaacacaatgcattattttttaattatgtattctgtaacctatagtttataacttgtaaatgtatcaaggtaagaaaaaaataaagagaaactt 17209991  T
Q  325 attgaaatatatataa 340  Q
    ||||||||||||||||    
T  17209992 attgaaatatatataa 17210007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 58 - 275
Target Start/End: Original strand, 17206436 - 17206658
Alignment:
Q  58 tgatttgagagaaaaaattgaaattgacgtcaaatatgtatgtgaagaaacacaaatgacaattgaag-tttatgtaagtctatggaaaagattaagggt 156  Q
    ||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||| |||| |||||| |||| ||||||||||||| ||||| ||||||    
T  17206436 tgattcgagagaagaaattgaaatggacgtcaaatatgtatgtgaagaaacacaaacgacacttgaagttttacgtaagtctatggagaagataaagggt 17206535  T
Q  157 cagtacaaatatgtatgcatttaattcatgt---tttcttggtaattattagttattaatgacgaaggtttaaaaactaaacacaatgcatta-ttttct 252  Q
    ||||||||| |||||||||||||||||||||   ||| || ||||||||||||||||||||| | |||||||||||||||| ||||||| ||| ||||||    
T  17206536 cagtacaaacatgtatgcatttaattcatgtttctttttttgtaattattagttattaatgatggaggtttaaaaactaaatacaatgcgttatttttct 17206635  T
Q  253 aattatgtattctgtaacctata 275  Q
    |||||||||||| ||||||||||    
T  17206636 aattatgtattcagtaacctata 17206658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 21936085 - 21936146
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21936085 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 21936146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 339 - 405
Target Start/End: Original strand, 13354844 - 13354910
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataat 405  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13354844 aagagcaatgttatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataat 13354910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 337 - 406
Target Start/End: Complemental strand, 23268131 - 23268062
Alignment:
Q  337 ataagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  23268131 ataagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 23268062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 339 - 406
Target Start/End: Complemental strand, 9293643 - 9293576
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  9293643 aagagcaatgctatatatcaagaaagattttatcaagaaattttcaagaatgacatggcagaataatc 9293576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 340 - 406
Target Start/End: Original strand, 35160756 - 35160822
Alignment:
Q  340 agagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  35160756 agagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 35160822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 332 - 406
Target Start/End: Original strand, 43330903 - 43330977
Alignment:
Q  332 tatatataagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||||| ||||||||||||||||||||||||| |||| |||| ||||||||||| ||||||||||||||    
T  43330903 tatatataagagcaatgctatatatcaagaaagattttctcaaaaaaaattcaagaatgacatggcagaataatc 43330977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 10661891 - 10661952
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  10661891 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 10661952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 31174895 - 31174834
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  31174895 aatgttatatatcaagaaagattttattaagaaaatttcaagaatgacatggcagaataatc 31174834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 406
Target Start/End: Complemental strand, 7475574 - 7475508
Alignment:
Q  340 agagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||  |||||||||    
T  7475574 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgatagaataatc 7475508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 406
Target Start/End: Complemental strand, 14941432 - 14941366
Alignment:
Q  340 agagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||| ||||||||||||||||||||||||||| ||||||  ||||||||||| ||||||||||||||    
T  14941432 agagcaatgctatatatcaagaaagattttattaagaaagattcaagaatgacatggcagaataatc 14941366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 21231572 - 21231526
Alignment:
Q  18 agttattgtttaaagagtacccgaacatgttttctttgagtgatttg 64  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  21231572 agttattgtttaaagagtacccgaacatgttttctttgagtgatttg 21231526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 33380211 - 33380272
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||| ||||| ||||||||    
T  33380211 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggctgaataatc 33380272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 353 - 406
Target Start/End: Original strand, 22591494 - 22591547
Alignment:
Q  353 atatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||| || |||| ||||||||||||||||||||||||||    
T  22591494 atatcaagaaagattttattaaaaaaaattcaagaatgatatggcagaataatc 22591547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 21393749 - 21393688
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||| ||||| ||||||||| || |||||||| |||| |||||||||    
T  21393749 aatgctatatatcaagaaaaattttctcaagaaaaatttaagaatgacatggtagaataatc 21393688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 406
Target Start/End: Original strand, 27847630 - 27847697
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| |||||| ||||| |||||||||||||| ||||||  ||||||||||| ||| ||||||||||    
T  27847630 aagagcaatgctgtatataaagaaagattttattaagaaagattcaagaatgacatgacagaataatc 27847697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 7475307 - 7475367
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||    
T  7475307 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgatatgacataataatc 7475367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 9723409 - 9723470
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||||| |||||||||||||| ||||||  || |||||||| ||| ||||||||||    
T  9723409 aatgctatatattaagaaagattttattaagaaagatttaagaatgacatgacagaataatc 9723470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 22592979 - 22592918
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||||||||||  ||||||||||| ||| || |||||||    
T  22592979 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 22592918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 33380473 - 33380413
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  33380473 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 33380413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 35161025 - 35160965
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  35161025 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 35160965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 369 - 406
Target Start/End: Original strand, 3989104 - 3989141
Alignment:
Q  369 tatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  3989104 tatcaagaaaattttaagaatgacatggcagaataatc 3989141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 10662154 - 10662094
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| ||| || |||||||    
T  10662154 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatc 10662094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 378
Target Start/End: Complemental strand, 40262747 - 40262714
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaa 378  Q
    |||| |||||||||||||||||||||||||||||    
T  40262747 aatgttatatatcaagaaagattttatcaagaaa 40262714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 8e-28; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 338 - 405
Target Start/End: Original strand, 15187557 - 15187624
Alignment:
Q  338 taagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataat 405  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15187557 taagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataat 15187624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 334 - 406
Target Start/End: Complemental strand, 42755114 - 42755042
Alignment:
Q  334 tatataagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  42755114 tatataagagcaatgatatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 42755042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 339 - 406
Target Start/End: Original strand, 32064743 - 32064810
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32064743 aagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 32064810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 34665386 - 34665447
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  34665386 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 34665447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 338 - 406
Target Start/End: Complemental strand, 37986123 - 37986055
Alignment:
Q  338 taagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||    
T  37986123 taagagtaatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 37986055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 339 - 406
Target Start/End: Complemental strand, 17841917 - 17841850
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  17841917 aagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 17841850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 339 - 406
Target Start/End: Complemental strand, 40780196 - 40780129
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  40780196 aagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 40780129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 20091862 - 20091801
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  20091862 aatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatc 20091801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 24211614 - 24211553
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  24211614 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatggcatggcagaataatc 24211553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 337 - 406
Target Start/End: Complemental strand, 26042185 - 26042116
Alignment:
Q  337 ataagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  26042185 ataagagcaatgctatatattaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 26042116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 32393862 - 32393923
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  32393862 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 32393923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 349 - 406
Target Start/End: Original strand, 38016979 - 38017036
Alignment:
Q  349 ctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  38016979 ctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 38017036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 339 - 406
Target Start/End: Complemental strand, 1646032 - 1645965
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||    
T  1646032 aagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaaagacatggcagaataatc 1645965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 14128868 - 14128929
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||    
T  14128868 aatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatc 14128929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 35353045 - 35353106
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  35353045 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 35353106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 351 - 406
Target Start/End: Original strand, 7021988 - 7022043
Alignment:
Q  351 atatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  7021988 atatatcaagaaagattttctcaagaaaaattcaagaatgatatggcagaataatc 7022043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 339 - 406
Target Start/End: Complemental strand, 31347849 - 31347782
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| ||||||||||||||||||| ||||| ||||||||| ||||||||||| ||||||||||||||    
T  31347849 aagagcaatgctatatatcaagaaatattttctcaagaaaaattcaagaatgacatggcagaataatc 31347782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 339 - 406
Target Start/End: Complemental strand, 39772868 - 39772801
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| |||| |||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||    
T  39772868 aagagcaatgttatatatcaagaaatattttatcaaaaaaatttcaagaatgacatggcagaataatc 39772801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 406
Target Start/End: Complemental strand, 41819844 - 41819778
Alignment:
Q  340 agagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||| |||| ||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||    
T  41819844 agagcaatgttatatatcaagaaagattttatcaagaatgttttaagaatgatatggcagaataatc 41819778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 3890413 - 3890474
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||||||||||  ||||||||||||||||||||||||||    
T  3890413 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgatatggcagaataatc 3890474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 8453838 - 8453899
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||| || |||||||    
T  8453838 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgacaaaataatc 8453899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 406
Target Start/End: Complemental strand, 7017933 - 7017865
Alignment:
Q  338 taagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||| |||||||||||||| |||||||||| | ||||||| ||||||||||| ||||||||||||||    
T  7017933 taagagcaatgctatatatcatgaaagattttcttaagaaaaattcaagaatgacatggcagaataatc 7017865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 339 - 406
Target Start/End: Complemental strand, 6108300 - 6108233
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| |||| |||||||||||||||||||| | |||||||||| |||||||| ||||||||||||||    
T  6108300 aagagcaatgttatatatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatc 6108233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 27782178 - 27782117
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||| ||||||||||||||  ||||| ||||| ||||||||||||||    
T  27782178 aatgctatatatcaagaaatattttatcaagaaagattcaataatgacatggcagaataatc 27782117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 37132719 - 37132658
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||| ||| ||||||||||||||| || |||||||| ||||||||||||||    
T  37132719 aatgctatatatcaaaaaatattttatcaagaaaaatttaagaatgacatggcagaataatc 37132658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 346 - 406
Target Start/End: Complemental strand, 25581299 - 25581239
Alignment:
Q  346 atgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||| |||||  ||||||||||||||||||| |||||| |||||||    
T  25581299 atgctatatatcaagaaagtttttacgaagaaaatttcaagaatgacatggcaaaataatc 25581239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 30835107 - 30835047
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||| ||||||||||||||||||||||| | |||| ||||||||||| ||||||||||||||    
T  30835107 aatgttatatatcaagaaagattttatcga-aaaaattcaagaatgacatggcagaataatc 30835047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 1503642 - 1503702
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  1503642 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 1503702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 3596840 - 3596900
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  3596840 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgatatggcacaataatc 3596900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 17841649 - 17841709
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  17841649 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 17841709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 26041912 - 26041972
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  26041912 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 26041972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 27835514 - 27835453
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||| |||||| |||| ||||||| ||||||||||| |||| | |||||||    
T  27835514 aatgctatatatcaataaagatcttattaagaaaaattcaagaatgacatggtaaaataatc 27835453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 40779928 - 40779988
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  40779928 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 40779988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 339 - 391
Target Start/End: Complemental strand, 24844925 - 24844873
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatga 391  Q
    ||||| ||||||| ||||||||||| ||||||| ||||||| |||||||||||    
T  24844925 aagagaaatgctacatatcaagaaatattttattaagaaaaattcaagaatga 24844873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 353 - 404
Target Start/End: Complemental strand, 1886672 - 1886621
Alignment:
Q  353 atatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataa 404  Q
    |||||||||| |||||||||||||||  |||||||||||  |||||||||||    
T  1886672 atatcaagaatgattttatcaagaaagattcaagaatgacgtggcagaataa 1886621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 406
Target Start/End: Complemental strand, 35353300 - 35353247
Alignment:
Q  352 tatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  35353300 tatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 35353247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 369 - 406
Target Start/End: Complemental strand, 3890653 - 3890616
Alignment:
Q  369 tatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  3890653 tatcaagaaaaattcaagaatgacatggcagaataatc 3890616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 6108032 - 6108092
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| ||| || |||||||    
T  6108032 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatc 6108092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 10044614 - 10044554
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||| |||||| |||||||    
T  10044614 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 10044554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 14129125 - 14129065
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||| |||||| |||||||    
T  14129125 aatgctagatatcaagaatgattttat-aagaaatattcaagaatgacatggcacaataatc 14129065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 20091600 - 20091660
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||| |||||| |||||||    
T  20091600 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 20091660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 31347575 - 31347635
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| ||||| |||||||||  ||||||||||| |||||| |||||||    
T  31347575 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 31347635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 34665647 - 34665587
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||| |||||| |||||||    
T  34665647 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 34665587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 37132479 - 37132540
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||||||||||  |||| |||||| ||| || |||||||    
T  37132479 aatgctagatatcaagaatgattttatcaagaaagattcatgaatgacatgacacaataatc 37132540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 37985855 - 37985915
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||| |||||| |||||||    
T  37985855 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 37985915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 405
Target Start/End: Complemental strand, 3597078 - 3597042
Alignment:
Q  369 tatcaagaaaatttcaagaatgatatggcagaataat 405  Q
    |||||||||| |||||||||||| |||||||||||||    
T  3597078 tatcaagaaagtttcaagaatgacatggcagaataat 3597042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 385
Target Start/End: Original strand, 30055547 - 30055587
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaa 385  Q
    ||||||||||| |||| ||||||||||||| ||||||||||    
T  30055547 aatgctatataccaaggaagattttatcaaaaaaatttcaa 30055587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 8e-28; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 339 - 406
Target Start/End: Complemental strand, 16045865 - 16045798
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  16045865 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 16045798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 338 - 406
Target Start/End: Original strand, 19015401 - 19015469
Alignment:
Q  338 taagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19015401 taagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatc 19015469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 336 - 406
Target Start/End: Complemental strand, 36966778 - 36966708
Alignment:
Q  336 tataagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36966778 tatatgagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatc 36966708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 37821895 - 37821834
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37821895 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatc 37821834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 40214992 - 40215053
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  40214992 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 40215053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 9910354 - 9910293
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  9910354 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 9910293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 44094702 - 44094763
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  44094702 aatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatc 44094763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 339 - 406
Target Start/End: Original strand, 18404440 - 18404507
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||||    
T  18404440 aagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggtagaataatc 18404507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 339 - 406
Target Start/End: Original strand, 25463674 - 25463741
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| ||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||    
T  25463674 aagagcaatgctatatatcaagaaagattttatgaagaaaattttaagaatgacatggcagaataatc 25463741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 3559621 - 3559682
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||    
T  3559621 aatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 3559682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 335 - 406
Target Start/End: Original strand, 25973408 - 25973478
Alignment:
Q  335 atataagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||    
T  25973408 atataagagcaatgttatatatcaagaaagattttatcatgaaaatttcaagaatgaca-ggcagaataatc 25973478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 340 - 406
Target Start/End: Complemental strand, 41876508 - 41876442
Alignment:
Q  340 agagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||| ||||||||||||||||||||||||| |||| ||||||| |||||||| ||||||||||||||    
T  41876508 agagcaatgctatatatcaagaaagattttttcaaaaaaattttaagaatgacatggcagaataatc 41876442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 6883491 - 6883552
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||||| |||||||||||| | ||||||||||||||||||| ||||||||||||||    
T  6883491 aatgctatatattaagaaagatttttttaagaaaatttcaagaatgacatggcagaataatc 6883552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 345 - 404
Target Start/End: Complemental strand, 32000328 - 32000269
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataa 404  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| ||| ||||||||    
T  32000328 aatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatgacagaataa 32000269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 406
Target Start/End: Original strand, 40273700 - 40273767
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| ||||||| ||||||||||||||||| ||||||||| ||||||||||| ||| || |||||||    
T  40273700 aagagcaatgctagatatcaagaaagattttttcaagaaaaattcaagaatgacatgtcaaaataatc 40273767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 19015670 - 19015610
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  19015670 aatgctacatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 19015610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 27523054 - 27523115
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||| ||||||||||||| |||||||||||||||  |||||||||  ||||||||| |||||    
T  27523054 aatgttatatatcaagaatgattttatcaagaaagattcaagaatcgtatggcagattaatc 27523115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 406
Target Start/End: Original strand, 44690828 - 44690881
Alignment:
Q  353 atatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| || |||||||||||||||  ||||||||||| ||||||||||||||    
T  44690828 atatcaataatgattttatcaagaaagattcaagaatgacatggcagaataatc 44690881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 51737771 - 51737711
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  51737771 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 51737711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 403
Target Start/End: Complemental strand, 6883753 - 6883696
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaata 403  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| ||||    
T  6883753 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcataata 6883696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 406
Target Start/End: Complemental strand, 27523324 - 27523255
Alignment:
Q  339 aagagtaatgctatata--tcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| |||||||||||  |||||||  ||||||||||||||| || |||||||| ||| ||||||||||    
T  27523324 aagagcaatgctatatacatcaagaacaattttatcaagaaaaatttaagaatgacatgacagaataatc 27523255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 378
Target Start/End: Original strand, 34519757 - 34519795
Alignment:
Q  340 agagtaatgctatatatcaagaaagattttatcaagaaa 378  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  34519757 agagcaatgctatatatcaagaaagattttattaagaaa 34519795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 378
Target Start/End: Original strand, 51620979 - 51621017
Alignment:
Q  340 agagtaatgctatatatcaagaaagattttatcaagaaa 378  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  51620979 agagcaatgctatatatcaagaaagattttattaagaaa 51621017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 403
Target Start/End: Original strand, 52064376 - 52064434
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaata 403  Q
    ||||||| ||||||| || |||||||||||||||  ||||||||||| ||| |||||||    
T  52064376 aatgctagatatcaaaaatgattttatcaagaaagattcaagaatgacatgacagaata 52064434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 406
Target Start/End: Original strand, 9910098 - 9910150
Alignment:
Q  353 atatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  9910098 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 9910150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 20304929 - 20304989
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||| |||||| |||||||    
T  20304929 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 20304989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 25973673 - 25973613
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| ||| || |||||||    
T  25973673 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatc 25973613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 32000065 - 32000125
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| ||||| |||||||||  ||||||||||| |||||| |||||||    
T  32000065 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 32000125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 33786430 - 33786490
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| ||||| |||||||||  ||||||||||| |||||| |||||||    
T  33786430 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 33786490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 33786695 - 33786635
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| ||||| |||||||||  ||||||||||| |||||| |||||||    
T  33786695 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 33786635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 37821633 - 37821693
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| ||| || |||||||    
T  37821633 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatc 37821693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 40215254 - 40215194
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||| |||||| |||||||    
T  40215254 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 40215194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 40273974 - 40273914
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| ||||| |||||||||  ||||||||||| |||||| |||||||    
T  40273974 aatgctagatatcaagaatgattt-atcaagaaatattcaagaatgacatggcacaataatc 40273914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 41876241 - 41876301
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| || ||| |||||||    
T  41876241 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatagcacaataatc 41876301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 44691083 - 44691030
Alignment:
Q  352 tatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataat 405  Q
    |||||||||||||||||||| || |||  ||||||||| | |||||||||||||    
T  44691083 tatatcaagaaagattttataaaaaaagattcaagaattacatggcagaataat 44691030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 337 - 406
Target Start/End: Original strand, 45637708 - 45637777
Alignment:
Q  337 ataagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  45637708 ataagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 45637777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 340 - 406
Target Start/End: Complemental strand, 15577916 - 15577850
Alignment:
Q  340 agagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15577916 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 15577850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 4974796 - 4974735
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  4974796 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 4974735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 42611815 - 42611876
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  42611815 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 42611876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 339 - 406
Target Start/End: Original strand, 15329271 - 15329338
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  15329271 aagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 15329338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 48880988 - 48880927
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  48880988 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 48880927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 345 - 404
Target Start/End: Original strand, 24394976 - 24395035
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataa 404  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  24394976 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 24395035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 340 - 406
Target Start/End: Original strand, 35444557 - 35444623
Alignment:
Q  340 agagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||| |||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  35444557 agagcaatgctatatattaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 35444623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 3961983 - 3962044
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||    
T  3961983 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatc 3962044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 34482839 - 34482900
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||||||    
T  34482839 aatgctatatatcaagaaagattttattaagaaaattttaagaatgacatggcagaataatc 34482900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 338 - 406
Target Start/End: Complemental strand, 37477148 - 37477080
Alignment:
Q  338 taagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||| ||||||||||||||||||||||||| ||||||||| || |||||||| ||||||||||||||    
T  37477148 taagagcaatgctatatatcaagaaagattttctcaagaaaaatttaagaatgacatggcagaataatc 37477080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 25167911 - 25167850
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||||| | |||||||||| |||||||| ||||||||||||||    
T  25167911 aatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatc 25167850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 341 - 406
Target Start/End: Original strand, 29737139 - 29737204
Alignment:
Q  341 gagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||||||||| | |||||||||| |||||||| |||| |||||||||    
T  29737139 gagtaatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggtagaataatc 29737204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 345 - 405
Target Start/End: Complemental strand, 36790527 - 36790467
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataat 405  Q
    |||||||||||||||||||| |||||||||||||| || |||||||| |||||||||||||    
T  36790527 aatgctatatatcaagaaagtttttatcaagaaaaatttaagaatgacatggcagaataat 36790467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 340 - 406
Target Start/End: Original strand, 18036977 - 18037043
Alignment:
Q  340 agagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||| |||| |||||||||||||||||||| ||||||||| || |||||||| ||||||||||||||    
T  18036977 agagcaatgatatatatcaagaaagattttttcaagaaaaatttaagaatgacatggcagaataatc 18037043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 345 - 391
Target Start/End: Complemental strand, 20010158 - 20010112
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatga 391  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  20010158 aatgctatatatcaagaaagattttatcaaaaaaatttcaagaatga 20010112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 15238386 - 15238447
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||| | ||| ||||||||| ||||||||||| ||||||||||||||    
T  15238386 aatgctatatatcaagaaaaaatttctcaagaaaaattcaagaatgacatggcagaataatc 15238447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 25167655 - 25167715
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  25167655 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 25167715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 35445663 - 35445603
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||||||| || |||||||    
T  35445663 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgatatgacacaataatc 35445603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 406
Target Start/End: Original strand, 42696079 - 42696148
Alignment:
Q  337 ataagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||| |||||||||||||||||||||| || ||  ||| |||||||| || |||||||||||    
T  42696079 ataagagcaatgttatatatcaagaaagattttattaaaaattttttaagaatgacatagcagaataatc 42696148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 48880726 - 48880786
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  48880726 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 48880786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 369 - 406
Target Start/End: Original strand, 30848597 - 30848634
Alignment:
Q  369 tatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  30848597 tatcaagaaaattttaagaatgacatggcagaataatc 30848634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 30848835 - 30848775
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| | |||||| ||||||| ||||||||||| |||||| |||||||    
T  30848835 aatgctagatatcaagaatgcttttat-aagaaaaattcaagaatgacatggcacaataatc 30848775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 5e-26; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 334 - 406
Target Start/End: Original strand, 22199254 - 22199326
Alignment:
Q  334 tatataagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  22199254 tatatatgagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 22199326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 339 - 406
Target Start/End: Complemental strand, 10442856 - 10442789
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  10442856 aagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 10442789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 335 - 406
Target Start/End: Complemental strand, 31078890 - 31078819
Alignment:
Q  335 atataagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31078890 atattagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 31078819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 336 - 406
Target Start/End: Original strand, 2624832 - 2624902
Alignment:
Q  336 tataagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2624832 tatatgagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgaaatggcagaataatc 2624902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 49387949 - 49387888
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  49387949 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 49387888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 338 - 406
Target Start/End: Original strand, 36073347 - 36073415
Alignment:
Q  338 taagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  36073347 taagaggaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 36073415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 339 - 406
Target Start/End: Complemental strand, 21802389 - 21802322
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  21802389 aagagcaatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatc 21802322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 339 - 406
Target Start/End: Original strand, 24128237 - 24128304
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  24128237 aagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 24128304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 345 - 404
Target Start/End: Original strand, 36072951 - 36073010
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataa 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36072951 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataa 36073010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 339 - 406
Target Start/End: Original strand, 47290064 - 47290131
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  47290064 aagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 47290131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 340 - 406
Target Start/End: Complemental strand, 33530754 - 33530688
Alignment:
Q  340 agagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  33530754 agagcaatgctatatatcaagaaagattttatcaagaaaaattcaagaatgacatggcagaataatc 33530688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 7745173 - 7745112
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  7745173 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 7745112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 340 - 404
Target Start/End: Original strand, 4751445 - 4751509
Alignment:
Q  340 agagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataa 404  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  4751445 agagcaatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataa 4751509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 339 - 406
Target Start/End: Original strand, 24392665 - 24392732
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| ||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||    
T  24392665 aagagcaatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatc 24392732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 339 - 406
Target Start/End: Original strand, 44893424 - 44893491
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| ||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||    
T  44893424 aagagcaatgctatatatcaagaaagattttttcaaaaaaatttcaagaatgacatggcagaataatc 44893491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 339 - 406
Target Start/End: Complemental strand, 23964532 - 23964465
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||    
T  23964532 aagagcaatgttatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 23964465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 339 - 406
Target Start/End: Complemental strand, 50156645 - 50156578
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| |||||||||||| |||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  50156645 aagagcaatgctatatattaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 50156578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 340 - 406
Target Start/End: Original strand, 53123029 - 53123096
Alignment:
Q  340 agagtaatgctatatatcaagaaagattttatcaa-gaaaatttcaagaatgatatggcagaataatc 406  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||    
T  53123029 agagcaatgctatatatcaagaaagattttttcaaagaaaatttcaagaatgacatggcagaataatc 53123096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 46441848 - 46441909
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||| |||||| |||||||    
T  46441848 aatgctatatatcaagaaagatttttttaagaaaatttcaagaatgacatggcaaaataatc 46441909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 403
Target Start/End: Complemental strand, 37935007 - 37934944
Alignment:
Q  340 agagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaata 403  Q
    |||| ||||||||||||||| |||||||||||||| ||||| |||||||||| |||| ||||||    
T  37935007 agagcaatgctatatatcaaaaaagattttatcaaaaaaatgtcaagaatgacatggtagaata 37934944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 347 - 406
Target Start/End: Original strand, 42671675 - 42671734
Alignment:
Q  347 tgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||| |||||||||||||| |||| || |||||||| ||||||||||||||    
T  42671675 tgctatatatcaataaagattttatcaaaaaaaatttaagaatgacatggcagaataatc 42671734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 406
Target Start/End: Complemental strand, 44893280 - 44893213
Alignment:
Q  340 agagtaatgctatatatcaagaaagattttatcaagaaaa-tttcaagaatgatatggcagaataatc 406  Q
    |||| |||||||||||| |||||||||||| |||| |||| |||||||||||| ||||||||||||||    
T  44893280 agagcaatgctatatattaagaaagattttttcaaaaaaaatttcaagaatgacatggcagaataatc 44893213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 25063373 - 25063434
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||||||||||  ||||||||||| |||| |||||||||    
T  25063373 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatggtagaataatc 25063434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 369 - 406
Target Start/End: Original strand, 9088898 - 9088935
Alignment:
Q  369 tatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  9088898 tatcaagaaaatttcaagaatgacatggcagaataatc 9088935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 9089136 - 9089076
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  9089136 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 9089076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 36073615 - 36073555
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  36073615 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 36073555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 406
Target Start/End: Complemental strand, 37219890 - 37219837
Alignment:
Q  353 atatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||| |||||||||||||||  || |||||||| ||||||||||||||    
T  37219890 atatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatc 37219837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 46442110 - 46442050
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  46442110 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 46442050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 53123297 - 53123237
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  53123297 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 53123237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 10442586 - 10442646
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||| |||||| |||||||    
T  10442586 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 10442646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 11314050 - 11314111
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||||||||||  | ||||||||| ||| || |||||||    
T  11314050 aatgctagatatcaagaatgattttatcaagaaagatgcaagaatgacatgacacaataatc 11314111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 373 - 406
Target Start/End: Original strand, 17655462 - 17655495
Alignment:
Q  373 aagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||| ||||||||||||||    
T  17655462 aagaaaatttcaagaatgacatggcagaataatc 17655495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 31078618 - 31078678
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| || |||||| ||||||||| |||||| |||||||    
T  31078618 aatgctagatatcaagaatgattttataaaaaaaatt-caagaatgacatggcacaataatc 31078678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 406
Target Start/End: Complemental strand, 42671927 - 42671874
Alignment:
Q  353 atatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||| |||||||||||||||  ||||||||||| ||| || |||||||    
T  42671927 atatcaagaatgattttatcaagaaagattcaagaatgacatgacataataatc 42671874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 47290332 - 47290272
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||| | |||||||    
T  47290332 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggtacaataatc 47290272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 7e-25; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 340 - 406
Target Start/End: Complemental strand, 33695393 - 33695327
Alignment:
Q  340 agagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  33695393 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 33695327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 340 - 406
Target Start/End: Original strand, 33696695 - 33696761
Alignment:
Q  340 agagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  33696695 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 33696761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 338 - 406
Target Start/End: Original strand, 6127272 - 6127340
Alignment:
Q  338 taagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  6127272 taagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 6127340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 339 - 406
Target Start/End: Complemental strand, 18365640 - 18365573
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  18365640 aagagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatc 18365573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 339 - 406
Target Start/End: Complemental strand, 18370904 - 18370837
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  18370904 aagagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatc 18370837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 339 - 406
Target Start/End: Complemental strand, 23291151 - 23291084
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  23291151 aagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 23291084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 339 - 406
Target Start/End: Original strand, 28675146 - 28675213
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||    
T  28675146 aagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgtcggaataatc 28675213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 17176082 - 17176021
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||    
T  17176082 aatgctatatatcaagaaagattttatcaataaaatttcaagaatgacatgacagaataatc 17176021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 17705526 - 17705465
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||    
T  17705526 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatc 17705465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 340 - 405
Target Start/End: Complemental strand, 18889762 - 18889698
Alignment:
Q  340 agagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataat 405  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  18889762 agagcaatgctatatatcaagaaagattt-atcaagaaaatttcaagaatgacatggcagaataat 18889698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 25986934 - 25986995
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||    
T  25986934 aatgctatatatcaagaaagattttattaagaaaatttcaagaatgacatggcaaaataatc 25986995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 339 - 406
Target Start/End: Complemental strand, 11548655 - 11548588
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| ||||||||||||||||| ||||| ||||||||| ||||||||||| ||||||||||||||    
T  11548655 aagagtattgctatatatcaagaaaaattttctcaagaaaaattcaagaatgacatggcagaataatc 11548588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 352 - 406
Target Start/End: Original strand, 32702216 - 32702270
Alignment:
Q  352 tatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  32702216 tatatcaagaaagattttttcatgaaaatttcaagaatgatatggcagaataatc 32702270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 6031802 - 6031741
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||||||||||||||||| ||||| ||||||| |||||||| ||| ||||||||||    
T  6031802 aatgctatatatcaagaaagatttcatcaataaaattttaagaatgacatgacagaataatc 6031741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 8515786 - 8515725
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||||||||||||||||||||||||| |  || |||||||| ||||||||||||||    
T  8515786 aatgctatatatcaagaaagattttatcaagacagatttaagaatgacatggcagaataatc 8515725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 406
Target Start/End: Complemental strand, 9752311 - 9752245
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| |||| |||||||||||||| | || |||||||||| ||||||||||||||||||||||||||    
T  9752311 aagagcaatgttatatatcaagaaaaaatt-atcaagaaaaattcaagaatgatatggcagaataatc 9752245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 345 - 405
Target Start/End: Complemental strand, 29693712 - 29693652
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataat 405  Q
    ||||||| |||||||||| |||||||||||||||  || |||||||| |||||||||||||    
T  29693712 aatgctagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataat 29693652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 406
Target Start/End: Complemental strand, 2309492 - 2309423
Alignment:
Q  337 ataagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||| ||||||||||||||||||||||||| |   ||| |||||||  ||||||||||||||    
T  2309492 ataagagcaatgttatatatcaagaaagattttatcaaaatttttttaagaatggcatggcagaataatc 2309423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 406
Target Start/End: Original strand, 582534 - 582588
Alignment:
Q  353 atatcaagaaagattttatcaagaaaatttcaagaatgatat-ggcagaataatc 406  Q
    |||||||||| |||||||| ||||||| || ||||||||||| ||||||||||||    
T  582534 atatcaagaatgattttattaagaaaaatttaagaatgatatgggcagaataatc 582588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 34238886 - 34238946
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||||||||| | ||||||||||| ||| || |||||||    
T  34238886 aatgctagatatcaagaatgattttatcaagaaga-ttcaagaatgacatgacacaataatc 34238946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 405
Target Start/End: Original strand, 23290880 - 23290939
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataat 405  Q
    ||||||| ||||||| || |||||||| ||||||  |||||||||||||||||| ||||||    
T  23290880 aatgctagatatcaaaaatgattttat-aagaaagattcaagaatgatatggcacaataat 23290939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 405
Target Start/End: Complemental strand, 32702471 - 32702412
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataat 405  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| ||| || ||||||    
T  32702471 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataat 32702412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 3456068 - 3456129
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3456068 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatc 3456129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 337 - 406
Target Start/End: Complemental strand, 3574596 - 3574527
Alignment:
Q  337 ataagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  3574596 ataagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 3574527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 48160909 - 48160970
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  48160909 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatc 48160970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 339 - 406
Target Start/End: Original strand, 2754715 - 2754782
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  2754715 aagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 2754782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 339 - 406
Target Start/End: Complemental strand, 34482977 - 34482910
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  34482977 aagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggtagaataatc 34482910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 339 - 405
Target Start/End: Original strand, 11347266 - 11347332
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataat 405  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  11347266 aagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 11347332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 6041888 - 6041949
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  6041888 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 6041949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 37217114 - 37217053
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  37217114 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 37217053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 338 - 406
Target Start/End: Original strand, 33113790 - 33113858
Alignment:
Q  338 taagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||    
T  33113790 taagagcaatgctatatatcaagaaagattttattaagaaaatttcaagaattacatggcagaataatc 33113858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 339 - 406
Target Start/End: Complemental strand, 3137481 - 3137414
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||    
T  3137481 aagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcaaaataatc 3137414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 8320645 - 8320584
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  8320645 aatgttatatatcaagaaagattttatcaagaaaattttaagaatgatatggcaaaataatc 8320584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 30385015 - 30385076
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  30385015 aatgctatttatcaagaaagattttatcaagaaaatttcaaaaatgacatggcagaataatc 30385076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 9797090 - 9797029
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||| |||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||    
T  9797090 aatgttatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatc 9797029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 19650961 - 19650900
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  19650961 aatgttatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 19650900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 406
Target Start/End: Original strand, 24343544 - 24343612
Alignment:
Q  338 taagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||| |||||||||||| |||||||||||||||||||||| ||||| | | ||||||||||||||||    
T  24343544 taagagcaatgctatatattaagaaagattttatcaagaaaaattcaaaattaatatggcagaataatc 24343612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 353 - 405
Target Start/End: Original strand, 47738117 - 47738169
Alignment:
Q  353 atatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataat 405  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  47738117 atatcaagaaagattttatcaagaaatattcaagaatgatatggcagaataat 47738169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 339 - 406
Target Start/End: Original strand, 37522051 - 37522118
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| ||| ||||||||||||||||||||| |||||||||||| |||||||| ||| ||||||||||    
T  37522051 aagagcaatactatatatcaagaaagattttttcaagaaaattttaagaatgacatgacagaataatc 37522118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 340 - 391
Target Start/End: Original strand, 42297352 - 42297403
Alignment:
Q  340 agagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatga 391  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  42297352 agagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatga 42297403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 340 - 406
Target Start/End: Complemental strand, 22426410 - 22426344
Alignment:
Q  340 agagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||| |||| ||||||| ||||||||||||||||||||||||| || ||||| ||||||||||||||    
T  22426410 agagcaatgttatatattaagaaagattttatcaagaaaattttaaaaatgacatggcagaataatc 22426344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 33145717 - 33145777
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||||||| || ||||||| |||||||| ||||||||||||||    
T  33145717 aatgctatatatcaagaaagattttattaa-aaaattttaagaatgacatggcagaataatc 33145777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 340 - 406
Target Start/End: Complemental strand, 36865093 - 36865027
Alignment:
Q  340 agagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||| |||||||||||| ||| |||||||||| |||||||||| |||||||| |||| |||||||||    
T  36865093 agagcaatgctatatattaaggaagattttattaagaaaattttaagaatgacatggtagaataatc 36865027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 347 - 402
Target Start/End: Original strand, 41224239 - 41224294
Alignment:
Q  347 tgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaat 402  Q
    |||||||||| |||||||||||| ||||||||| ||||||||||| |||| |||||    
T  41224239 tgctatatattaagaaagattttctcaagaaaaattcaagaatgacatggtagaat 41224294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 391
Target Start/End: Original strand, 42921154 - 42921193
Alignment:
Q  352 tatatcaagaaagattttatcaagaaaatttcaagaatga 391  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  42921154 tatatcaagaaagattttatcaagaaaattttaagaatga 42921193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 404
Target Start/End: Original strand, 26612794 - 26612848
Alignment:
Q  350 tatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataa 404  Q
    |||||||||| ||||||||||| || |||| ||||||||||| ||||||||||||    
T  26612794 tatatatcaaaaaagattttataaaaaaaaattcaagaatgacatggcagaataa 26612848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 3137213 - 3137273
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  3137213 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 3137273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 8362106 - 8362045
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||| |   | ||||||||| ||||||||||| ||||||||||||||    
T  8362106 aatgctatatatcaagaaaaaaaatttcaagaaaaattcaagaatgacatggcagaataatc 8362045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 34482687 - 34482747
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  34482687 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 34482747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 378
Target Start/End: Original strand, 40327879 - 40327912
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaa 378  Q
    ||||||||||||||||||||||||||||||||||    
T  40327879 aatgctatatatcaagaaagattttatcaagaaa 40327912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 40328098 - 40328037
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||||||||||  ||||||||||| ||| || |||||||    
T  40328098 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 40328037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 335 - 372
Target Start/End: Complemental strand, 47402667 - 47402630
Alignment:
Q  335 atataagagtaatgctatatatcaagaaagattttatc 372  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  47402667 atataagagcaatgctatatatcaagaaagattttatc 47402630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 406
Target Start/End: Complemental strand, 47738370 - 47738317
Alignment:
Q  353 atatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||| |||||||||||||||  ||||||||||| |||||| |||||||    
T  47738370 atatcaagaatgattttatcaagaaagattcaagaatgacatggcacaataatc 47738317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 350 - 406
Target Start/End: Complemental strand, 33839797 - 33839741
Alignment:
Q  350 tatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||| |||||||||||||||  ||||||||||| ||| || |||||||    
T  33839797 tatatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 33839741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 406
Target Start/End: Original strand, 33839529 - 33839596
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| |||| ||||||| ||||||||||||||||| |||| || |||||| | ||| ||||||||||    
T  33839529 aagagcaatgttatatattaagaaagattttatcaaaaaaaatttaagaataacatgacagaataatc 33839596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 22426144 - 22426204
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||| |||||| |||||||    
T  22426144 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 22426204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 30385666 - 30385606
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||| |||||| |||||||    
T  30385666 aatgctaaatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 30385606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 33114060 - 33114000
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||| |||||| |||||||    
T  33114060 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 33114000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 36864831 - 36864892
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| ||||||||||| |||  ||||||||||| ||| || |||||||    
T  36864831 aatgctagatatcaagaatgattttatcaaaaaagattcaagaatgacatgacacaataatc 36864892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 41224500 - 41224440
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| ||||| |||||||||  ||||||||||| |||||| |||||||    
T  41224500 aatgctagatatcaagaatgattt-atcaagaaatattcaagaatgacatggcacaataatc 41224440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 369 - 406
Target Start/End: Complemental strand, 41883260 - 41883223
Alignment:
Q  369 tatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  41883260 tatcaagaaaaattcaagaatgacatggcagaataatc 41883223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 353 - 406
Target Start/End: Complemental strand, 46919153 - 46919100
Alignment:
Q  353 atatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||| ||||||||||| |||  ||||| ||||| ||||||||||||||    
T  46919153 atatcaagaatgattttatcaaaaaagattcaataatgacatggcagaataatc 46919100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 57; Significance: 1e-23; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 338 - 406
Target Start/End: Complemental strand, 6043579 - 6043511
Alignment:
Q  338 taagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  6043579 taagagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggaagaataatc 6043511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 339 - 406
Target Start/End: Original strand, 2477634 - 2477701
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  2477634 aagagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 2477701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 339 - 406
Target Start/End: Original strand, 8145373 - 8145440
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8145373 aagaggaatgttatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 8145440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 4434068 - 4434007
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  4434068 aatgctatatatcaagaaagatttttttaagaaaatttcaagaatgatatggcagaataatc 4434007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 11361192 - 11361131
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  11361192 aatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 11361131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 337 - 406
Target Start/End: Original strand, 14138664 - 14138733
Alignment:
Q  337 ataagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  14138664 ataagagcaatgttatatatcaagaaagattttatcaagaaaatttcaagaattacatggcagaataatc 14138733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 340 - 404
Target Start/End: Original strand, 3362777 - 3362841
Alignment:
Q  340 agagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataa 404  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  3362777 agagcaatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataa 3362841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 340 - 404
Target Start/End: Complemental strand, 38899792 - 38899728
Alignment:
Q  340 agagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataa 404  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  38899792 agagcaatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataa 38899728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 339 - 406
Target Start/End: Original strand, 4892200 - 4892267
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| ||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  4892200 aagagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 4892267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 22913115 - 22913054
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||    
T  22913115 aatgctatatatcaagaaagattttttcaagaaaaattcaagaatgacatggcagaataatc 22913054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 25398242 - 25398303
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  25398242 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 25398303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 33584390 - 33584329
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  33584390 aatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 33584329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 345 - 404
Target Start/End: Original strand, 12850805 - 12850864
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataa 404  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||    
T  12850805 aatgctatatatcaagaaagattttatcaagaaaattccaaaaatgacatggcagaataa 12850864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 37321855 - 37321793
Alignment:
Q  345 aatgctatatatc-aagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  37321855 aatgctatatatctaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 37321793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 3522067 - 3522006
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||| |||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  3522067 aatgttatatatcaagaaagattttttcaagaaaatttcaaaaatgacatggcagaataatc 3522006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 17545746 - 17545685
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||| | ||| ||||||||| ||||||||||| ||||||||||||||    
T  17545746 aatgctatatatcaagaaaaaatttctcaagaaaaattcaagaatgacatggcagaataatc 17545685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 353 - 406
Target Start/End: Original strand, 10458409 - 10458462
Alignment:
Q  353 atatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||| ||||||||||||||| ||||||||||| |||||| |||||||    
T  10458409 atatcaagaaaaattttatcaagaaaaattcaagaatgacatggcaaaataatc 10458462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 12614794 - 12614733
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||| ||||||||||||||  ||||||||||| ||| || |||||||    
T  12614794 aatgctatatatcaagaaatattttatcaagaaagattcaagaatgacatgacataataatc 12614733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 396
Target Start/End: Original strand, 27481829 - 27481881
Alignment:
Q  344 taatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatgg 396  Q
    ||||||||| ||| |||||||||||||||||||||| ||||||||||| ||||    
T  27481829 taatgctatgtattaagaaagattttatcaagaaaaattcaagaatgacatgg 27481881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 4892468 - 4892408
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  4892468 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 4892408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 33584128 - 33584188
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  33584128 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 33584188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 345 - 404
Target Start/End: Complemental strand, 12851068 - 12851010
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataa 404  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||    
T  12851068 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataa 12851010  T

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Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 345 - 404
Target Start/End: Original strand, 38899524 - 38899583
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataa 404  Q
    ||||||| |||||||||| |||||||| || |||| ||||||||||| |||||| |||||    
T  38899524 aatgctagatatcaagaatgattttataaaaaaaaattcaagaatgacatggcacaataa 38899583  T

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Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 8145639 - 8145579
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||| |||||| |||||||    
T  8145639 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 8145579  T

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Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 22912856 - 22912916
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| ||||| |||||||||  ||||||||||| |||||| |||||||    
T  22912856 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 22912916  T

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Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 37321592 - 37321652
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||  ||||||||||| |||||| |||||||    
T  37321592 aatgctagatatcaagaatgattttat-aagaaatattcaagaatgaaatggcacaataatc 37321652  T

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Target: scaffold0471 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 339 - 406
Target Start/End: Original strand, 12840 - 12907
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  12840 aagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 12907  T

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Target: scaffold0096 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 339 - 406
Target Start/End: Original strand, 41009 - 41076
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  41009 aagagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatc 41076  T

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Target: scaffold0178 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 11625 - 11686
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  11625 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 11686  T

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Target: scaffold0085 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 47854 - 47915
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  47854 aatgctatttatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 47915  T

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Target: scaffold0204 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 339 - 406
Target Start/End: Original strand, 4394 - 4461
Alignment:
Q  339 aagagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||| ||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  4394 aagagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 4461  T

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Target: scaffold0204; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 4662 - 4602
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| || ||||||||||||||| |||||||    
T  4662 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgatatggcacaataatc 4602  T

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Target: scaffold0228 (Bit Score: 51; Significance: 4e-20; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 352 - 406
Target Start/End: Original strand, 8413 - 8467
Alignment:
Q  352 tatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8413 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 8467  T

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Target: scaffold0228; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 352 - 406
Target Start/End: Original strand, 15995 - 16049
Alignment:
Q  352 tatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15995 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 16049  T

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Target: scaffold0228; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 352 - 406
Target Start/End: Original strand, 25947 - 26001
Alignment:
Q  352 tatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  25947 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 26001  T

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Target: scaffold0228; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 16250 - 16190
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  16250 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 16190  T

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Target: scaffold0228; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 26202 - 26142
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    ||||||| |||||||||| |||||||| ||||||| ||||||||||| |||||| |||||||    
T  26202 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 26142  T

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Target: scaffold0665 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 3072 - 3133
Alignment:
Q  345 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 406  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||    
T  3072 aatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatc 3133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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