View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8949_low_6 (Length: 524)

Name: NF8949_low_6
Description: NF8949
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8949_low_6
NF8949_low_6
[»] chr6 (13 HSPs)
chr6 (18-512)||(22919741-22920235)
chr6 (18-512)||(17231064-17231562)
chr6 (18-368)||(17695943-17696293)
chr6 (22-511)||(31122637-31123130)
chr6 (18-298)||(2330053-2330334)
chr6 (18-172)||(2330843-2330997)
chr6 (18-174)||(7560589-7560745)
chr6 (20-68)||(33679611-33679659)
chr6 (20-68)||(12746452-12746500)
chr6 (22-66)||(28894906-28894950)
chr6 (20-68)||(35027557-35027605)
chr6 (18-47)||(11410443-11410472)
chr6 (21-65)||(11296471-11296515)
[»] chr3 (15 HSPs)
chr3 (87-512)||(23375209-23375633)
chr3 (87-512)||(16315068-16315493)
chr3 (87-512)||(18496062-18496487)
chr3 (87-512)||(29234067-29234494)
chr3 (87-512)||(16415234-16415659)
chr3 (87-512)||(18516208-18516633)
chr3 (87-512)||(5897447-5897873)
chr3 (87-512)||(5887463-5887889)
chr3 (18-512)||(6173763-6174260)
chr3 (18-173)||(20536988-20537143)
chr3 (20-68)||(27054518-27054566)
chr3 (20-68)||(3305496-3305544)
chr3 (20-68)||(28327090-28327138)
chr3 (20-68)||(28330415-28330463)
chr3 (20-68)||(4250032-4250080)
[»] chr1 (13 HSPs)
chr1 (87-512)||(24200724-24201146)
chr1 (103-512)||(16849359-16849769)
chr1 (103-512)||(16839429-16839839)
chr1 (18-512)||(20980569-20981066)
chr1 (18-512)||(20963666-20964163)
chr1 (18-512)||(17903200-17903696)
chr1 (18-506)||(28917588-28918078)
chr1 (20-66)||(50197339-50197385)
chr1 (19-68)||(23441707-23441756)
chr1 (20-68)||(33897972-33898020)
chr1 (18-47)||(49716049-49716078)
chr1 (18-47)||(49719532-49719561)
chr1 (20-68)||(34553107-34553155)
[»] chr7 (16 HSPs)
chr7 (87-512)||(2251084-2251509)
chr7 (18-512)||(23599174-23599669)
chr7 (87-512)||(26459678-26460103)
chr7 (18-512)||(748456-748951)
chr7 (18-512)||(710429-710927)
chr7 (18-512)||(20099857-20100348)
chr7 (19-512)||(2348683-2349178)
chr7 (61-174)||(42606158-42606271)
chr7 (20-68)||(12803687-12803735)
chr7 (20-68)||(38431040-38431088)
chr7 (20-67)||(6963935-6963982)
chr7 (20-66)||(26152800-26152846)
chr7 (20-68)||(3541590-3541638)
chr7 (20-68)||(44018216-44018264)
chr7 (20-66)||(43548842-43548888)
chr7 (20-61)||(28578321-28578362)
[»] chr4 (13 HSPs)
chr4 (87-512)||(49637004-49637429)
chr4 (87-512)||(3733526-3733951)
chr4 (87-512)||(49640297-49640722)
chr4 (18-512)||(3719908-3720404)
chr4 (18-512)||(14701114-14701612)
chr4 (18-511)||(23652509-23652985)
chr4 (20-68)||(56089738-56089786)
chr4 (18-65)||(11560470-11560517)
chr4 (245-311)||(19928306-19928372)
chr4 (20-68)||(13978780-13978828)
chr4 (20-68)||(15850820-15850868)
chr4 (20-68)||(26703914-26703962)
chr4 (29-68)||(19928550-19928589)
[»] chr2 (8 HSPs)
chr2 (87-512)||(18938107-18938532)
chr2 (18-512)||(18011158-18011654)
chr2 (18-512)||(22591721-22592221)
chr2 (116-317)||(2648855-2649057)
chr2 (20-68)||(40678196-40678244)
chr2 (418-511)||(2649159-2649253)
chr2 (18-47)||(29435429-29435458)
chr2 (20-68)||(38316470-38316519)
[»] chr5 (8 HSPs)
chr5 (18-512)||(26726157-26726653)
chr5 (21-512)||(4732249-4732730)
chr5 (18-317)||(25184789-25185090)
chr5 (20-117)||(9690360-9690457)
chr5 (20-68)||(2500431-2500479)
chr5 (20-68)||(26337629-26337677)
chr5 (21-68)||(35432900-35432947)
chr5 (20-66)||(33321347-33321393)
[»] scaffold0067 (1 HSPs)
scaffold0067 (87-512)||(26574-26999)
[»] chr8 (14 HSPs)
chr8 (87-512)||(24434244-24434669)
chr8 (87-512)||(24444290-24444715)
chr8 (18-512)||(17013444-17013938)
chr8 (18-512)||(17543263-17543757)
chr8 (18-509)||(27863969-27864458)
chr8 (18-512)||(24903895-24904393)
chr8 (18-285)||(22653700-22653966)
chr8 (19-207)||(31392133-31392321)
chr8 (375-511)||(27234361-27234497)
chr8 (324-512)||(31392365-31392555)
chr8 (20-68)||(5827673-5827721)
chr8 (20-68)||(9466775-9466823)
chr8 (29-68)||(39660389-39660428)
chr8 (20-68)||(13331736-13331784)
[»] scaffold0175 (1 HSPs)
scaffold0175 (18-512)||(29072-29568)
[»] scaffold0012 (1 HSPs)
scaffold0012 (87-512)||(31546-31974)
[»] scaffold0043 (1 HSPs)
scaffold0043 (20-68)||(13238-13286)
[»] scaffold0401 (1 HSPs)
scaffold0401 (20-117)||(3856-3953)
[»] scaffold0637 (1 HSPs)
scaffold0637 (20-68)||(1906-1954)
[»] scaffold0273 (1 HSPs)
scaffold0273 (20-68)||(20109-20157)
[»] scaffold0083 (2 HSPs)
scaffold0083 (20-68)||(28968-29016)
scaffold0083 (20-68)||(52765-52813)
[»] scaffold0002 (1 HSPs)
scaffold0002 (85-127)||(468933-468975)


Alignment Details
Target: chr6 (Bit Score: 356; Significance: 0; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 18 - 512
Target Start/End: Complemental strand, 22920235 - 22919741
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    |||||||||||||||| ||| ||||||||| |||||||   |  || || |||| |||||   | ||  ||||||||||| || ||||||||||||||||    
T  22920235 catcatggctcaatcatactgagagtttagctactcatggttttacgattataaacataattaacagtgaacatacataa-tcaggaccaactatgagtt 22920137  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatcgaaccctaatccttggccgcatctcacctta 217  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  22920136 ggtatgagattcagggcttgttcttctgtcttctgatgtcttctatgctcaaaatcgtacttcccaatcgaactctaatccttggccgcatctcgcctta 22920037  T
Q  218 tatagaaag-tttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaa 316  Q
    ||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22920036 tatagaaagatttttagagttccagaaagcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaa 22919937  T
Q  317 aacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtcccacgttcacttatcgtgccacgaaccagcttca 416  Q
    |||||||||||||||||| ||||| || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22919936 aacctagcatcgtggcactttgcattttgcttcgtgccacgaaatttccagtgctgaacctttgtcccacgttcacttatcgtgccacgaaccagcttca 22919837  T
Q  417 tcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtcttttgagctcctgttcctgttttggtctgatttcaccatgat 512  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||| |||||||||||||||||||||||||||||||    
T  22919836 tcgtggcacgattcttaactcttaggaatttttcatctttttctcagtttcgtcagttgagctcttgttcctgttttggtctgatttcaccatgat 22919741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 18 - 512
Target Start/End: Complemental strand, 17231562 - 17231064
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    |||||||||||||||||||||||||||||| |||||||  ||  ||||| |||| ||||||  ||||  ||||||||||| ||| |||||||||||||||    
T  17231562 catcatggctcaatcaaactaagagtttagctactcatggcttcacaattataaacataaataagagtgaacatacataaatccagaccaactatgagtt 17231463  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatcgaaccctaatccttggccgcatctcacctta 217  Q
    |||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||| | ||||||||||| |||||||||||||||||| ||| | |||    
T  17231462 ggtatgagattcagggctagttcttcggtctcctggtgtcttctatgctcaaaatcgcaattcccaatcgatccctaatccttggccgcagctcgcttta 17231363  T
Q  218 tatagaaag-tttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaa 316  Q
     ||||||||  |||| | ||| ||||| |||||||| ||||||||| |||||||| ||||||||||| | || | | |||||||||||||||||||| ||    
T  17231362 aatagaaagaattttagggtttcagaa-gcccatcagcgtgccacgttacgatcctatcgtggcacgttggctttactaatcctacgtggcagcagagaa 17231264  T
Q  317 aacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaa-cctttgtcccacgttcacttatcgtgccacgaaccagcttc 415  Q
    |||||||||||||||||| |||||  | |||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||| ||||||    
T  17231263 aacctagcatcgtggcacattgcatattgcttcgtgccacgaaatttccagtgttgaagcctttgttccacgttcacatatcgtgccacgaacaagcttc 17231164  T
Q  416 atcgtggcacgattcttaactcttaggaa--tttttcatctttttctcattttcgtct-tttgagctcctgttcctgttttggtctgatttcaccatgat 512  Q
    ||||| |  |||| ||| |||||||||||  |||||||||||||||||| |||| ||| ||||||||| |||||||||||||||||||||||||||||||    
T  17231163 atcgtcgtgcgatgcttcactcttaggaatttttttcatctttttctcagtttcttctctttgagctcttgttcctgttttggtctgatttcaccatgat 17231064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 18 - 368
Target Start/End: Complemental strand, 17696293 - 17695943
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    ||||||||||||||||||||||||| |||| |||||||| |||||||||||||| ||||||| ||||||||||||||||| ||   |||||| ||| |||    
T  17696293 catcatggctcaatcaaactaagagcttagctactcatagctaaacaatcataaacataaacaagagaaaacatacataaatctt-accaacgatgtgtt 17696195  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatcga-accctaatccttggccgcatctcacctt 216  Q
    ||||||||| | |||||||||||||| |||| ||| |||||||||||||  |||||| | |    |||||  ||||||||||||||| ||| ||  | ||    
T  17696194 ggtatgagacttagggcttgttcttcagtctcctggtgtcttctatgcttcaaatcgcagtaat-aatcggtaccctaatccttggctgcagctagcttt 17696096  T
Q  217 atatagaaagt-ttttcgagttccagaac-gcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagac 314  Q
    ||||||||||  |||| | ||| |||||  |||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  17696095 atatagaaagaattttagggtttcagaaaagcccatcatcgtgccacgttacgatccaatcgtggcacgatgacatcattaatcctacgtggcagcagac 17695996  T
Q  315 aaaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagt 368  Q
    |||||||||||||| |||||||| ||  | ||||||||||||||||||||||||    
T  17695995 aaaacctagcatcg-ggcacgttacatgttgcttcgtgccacgaaatttccagt 17695943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 22 - 511
Target Start/End: Complemental strand, 31123130 - 31122637
Alignment:
Q  22 atggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagttggta 121  Q
    |||||||||||||||||||||||||  |||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  31123130 atggctcaatcaaactaagagtttaactactgataactaaacaatcataagcataaacaagagaaaacatacataaatccggaccaactatgagttggta 31123031  T
Q  122 tgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatc-gaaccctaatccttggccgcatctcaccttatat 220  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |  |   |||| | ||||||| |||| ||   | || | |||  ||    
T  31123030 tgagattcagggcttgttcttcggtctcctggtgtcttctatgctcaaaatcgca-ataataatcggtaccctaaaccttagcattagct-agctttcat 31122933  T
Q  221 agaaag-tttttcgagttccag-aacgcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaaaa 318  Q
    ||||||  |||| | ||| ||| || |||||||||||||||||| ||||||||||||||||||| ||  | |||||||||||||| || || ||| ||||    
T  31122932 agaaagaattttagggtttcagaaaagcccatcatcgtgccacgttacgatccaatcgtggcacaattacttcattaatcctacgaggtagtagataaaa 31122833  T
Q  319 cctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttga--acctttgtcc--cacgttcacttatcgtgccacgaaccagctt 414  Q
    |||||||||||| |||| | ||   |   ||||| |||||   || |||  ||||   |||||||||  ||| |||||  | |||||||||||||  |||    
T  31122832 cctagcatcgtgacacgatccacaaattgtcgtggcacgattctttcagaattgatttcctttgtcccacaccttcac--aacgtgccacgaaccttctt 31122735  T
Q  415 catcgtggcacgattcttaactcttaggaat-ttttcatctttttctcattttcgtcttttgagctcctgttcctgttttggtctgatttcaccatga 511  Q
    || ||||||||||||||| || ||||||||| ||||||||||||  ||| |||| ||||||| |||| ||||||| ||||| | |||||| |||||||    
T  31122734 caacgtggcacgattcttcacacttaggaatattttcatcttttcatcaatttcttcttttgggctcttgttcctattttgatatgattttaccatga 31122637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 18 - 298
Target Start/End: Complemental strand, 2330334 - 2330053
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    ||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||| |||| |||||||||||| | || ||||||||||||||    
T  2330334 catcatggctcaatcaatctaagagtttagatactcatatcaaaacgatcataagcataaacaagagtaaacatacataaattcgaaccaactatgagtt 2330235  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatc-gaaccctaatccttggccgcatctcacctt 216  Q
    ||||||||||||| |||||||||||  |||| ||| ||||||||||||||||||| | |  |   |||| | |||||||||||||||| ||  |  | ||    
T  2330234 ggtatgagattcatggcttgttctttagtctcctggtgtcttctatgctcaaaattg-aagtaataatcagtaccctaatccttggcctcaagtggcttt 2330136  T
Q  217 atatagaaag-tttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatc 298  Q
    ||||||||||  |||| | ||| ||||| |||||||||||||||||| ||||   |||||||||||||||  | |||||||||    
T  2330135 atatagaaagaattttagggtttcagaaagcccatcatcgtgccacgttacgggacaatcgtggcacgatcacttcattaatc 2330053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 2330997 - 2330843
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    ||||||||||||||||| |||||||||||| |||||||| | |||| ||||||||||||||| |||| |||||||||||| |||| || |||||||||||    
T  2330997 catcatggctcaatcaatctaagagtttagctactcatatcaaaacgatcataagcataaacaagagtaaacatacataaatccgaactaactatgagtt 2330898  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaat 172  Q
    |||||||||||||||||||||||||| |||| ||| |||||||||||||||||||    
T  2330897 ggtatgagattcagggcttgttcttcagtctcctgctgtcttctatgctcaaaat 2330843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 18 - 174
Target Start/End: Original strand, 7560589 - 7560745
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    |||||||| |||||||| ||||||| |||| ||||||||||||||||||||||| |||  || |||| |||||||||||| |||| ||||||||||||||    
T  7560589 catcatggttcaatcaacctaagagattagctactcataactaaacaatcataaacatttacaagagtaaacatacataaatccgaaccaactatgagtt 7560688  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcg 174  Q
    ||||||||||||||||||||||||| ||||| ||| ||  | |||||||| ||||||    
T  7560689 ggtatgagattcagggcttgttcttaggtctcctggtgcttcctatgctcgaaatcg 7560745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 33679611 - 33679659
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    |||||||| |||||| |||||||||||| ||||||||||||||||||||    
T  33679611 tcatggcttaatcaatctaagagtttagctactcataactaaacaatca 33679659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 12746500 - 12746452
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    |||||||| ||||||  ||||||||||| ||||||||||||||||||||    
T  12746500 tcatggcttaatcaatttaagagtttagctactcataactaaacaatca 12746452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 28894906 - 28894950
Alignment:
Q  22 atggctcaatcaaactaagagtttagatactcataactaaacaat 66  Q
    |||||| |||||| |||||||||||||||| ||||||||||||||    
T  28894906 atggcttaatcaatctaagagtttagatacacataactaaacaat 28894950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 35027557 - 35027605
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    |||||||| |||||| ||||||| |||| ||||||||||||||||||||    
T  35027557 tcatggcttaatcaatctaagagcttagctactcataactaaacaatca 35027605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 47
Target Start/End: Complemental strand, 11410472 - 11410443
Alignment:
Q  18 catcatggctcaatcaaactaagagtttag 47  Q
    ||||||||||||||||||||||||||||||    
T  11410472 catcatggctcaatcaaactaagagtttag 11410443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 11296471 - 11296515
Alignment:
Q  21 catggctcaatcaaactaagagtttagatactcataactaaacaa 65  Q
    ||||||| ||||||  ||||||||||| |||||||||||||||||    
T  11296471 catggcttaatcaatttaagagtttagctactcataactaaacaa 11296515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 355; Significance: 0; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 87 - 512
Target Start/End: Original strand, 23375209 - 23375633
Alignment:
Q  87 aacatacataactccggaccaactatgagttggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatc 186  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||     
T  23375209 aacatacataa-tcaggaccaactatgagttggtatgagattcagggcttgttcttcggtcttctgatgtcttctagggtcaaaatcgtacttcccaata 23375307  T
Q  187 gaaccctaatccttggccgcatctcaccttatatagaaag-tttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgat 285  Q
    ||||||||||||||||||||||||| |||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  23375308 gaaccctaatccttggccgcatctcgccttatatagaaagatttttcgagttccaaaaagcccatcatcgtgccacgatacgatccaatcgtggcacgat 23375407  T
Q  286 agcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtccca 385  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||    
T  23375408 agcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcaatt-gcttcgtgccacgaaatttccagtgctgaacctatgtccca 23375506  T
Q  386 cgttcacttatcgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtcttttgagctcctgtt 485  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23375507 cgttcacttatcgtgccacgaacaagcttcatcgtggcacgactcttaactcttaggaatttttcatctttttctcagtttcgtcttttgagctcctgtt 23375606  T
Q  486 cctgttttggtctgatttcaccatgat 512  Q
    |||||||||||||||||||||||||||    
T  23375607 cctgttttggtctgatttcaccatgat 23375633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 87 - 512
Target Start/End: Original strand, 16315068 - 16315493
Alignment:
Q  87 aacatacataactccggaccaactatgagttggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatc 186  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16315068 aacatacataa-tcaggaccaactatgagttggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgcacttcccaatc 16315166  T
Q  187 gaaccctaatccttggccgcatctcaccttatatagaaag-tttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgat 285  Q
    ||||||||||||||||||||||||  |||||||||||||| ||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  16315167 gaaccctaatccttggccgcatcttgccttatatagaaagatttttagagttctagaaagcccatcatcgtgccacgatacgatccaatcgtggcacgat 16315266  T
Q  286 agcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtccca 385  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||| |||||||||||| ||    
T  16315267 agcatcattaatcctacgtggcagcagacaaaacctagcatcatggcacgttgcattttgcttcgtgccacgaaatttccagtgctgaacctttgtctca 16315366  T
Q  386 cgttcacttatcgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtcttttgagctcctgtt 485  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||    
T  16315367 cgttcacttatcgtgccacgaaccagcttcattgtggcacgattcttaactcttaggaatttttcatcattttctcagtttcgtcttttgagctcttgtt 16315466  T
Q  486 cctgttttggtctgatttcaccatgat 512  Q
    |||||||||||||||||||||||||||    
T  16315467 cctgttttggtctgatttcaccatgat 16315493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 87 - 512
Target Start/End: Original strand, 18496062 - 18496487
Alignment:
Q  87 aacatacataactccggaccaactatgagttggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatc 186  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18496062 aacatacataa-tcaggaccaactatgagttggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgcacttcccaatc 18496160  T
Q  187 gaaccctaatccttggccgcatctcaccttatatagaaag-tttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgat 285  Q
    ||||||||||||||||||||||||  |||||||||||||| ||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  18496161 gaaccctaatccttggccgcatcttgccttatatagaaagatttttagagttctagaaagcccatcatcgtgccacgatacgatccaatcgtggcacgat 18496260  T
Q  286 agcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtccca 385  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||| |||||||||||| ||    
T  18496261 agcatcattaatcctacgtggcagcagacaaaacctagcatcatggcacgttgcattttgcttcgtgccacgaaatttccagtgctgaacctttgtctca 18496360  T
Q  386 cgttcacttatcgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtcttttgagctcctgtt 485  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||    
T  18496361 cgttcacttatcgtgccacgaaccagcttcattgtggcacgattcttaactcttaggaatttttcatcattttctcagtttcgtcttttgagctcttgtt 18496460  T
Q  486 cctgttttggtctgatttcaccatgat 512  Q
    |||||||||||||||||||||||||||    
T  18496461 cctgttttggtctgatttcaccatgat 18496487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 87 - 512
Target Start/End: Original strand, 29234067 - 29234494
Alignment:
Q  87 aacatacataactccggaccaactatgagttggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatc 186  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29234067 aacatacataa-tcaggaccaactatgagttggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatc 29234165  T
Q  187 gaaccctaatccttggccgcatctcaccttatatagaaag-tttttcgagttccagaacgcccatcatcgtgccac--gatacgatccaatcgtggcacg 283  Q
    ||||||||||||||||| ||||||| || ||||||||||| ||||| ||||||||||| || ||||||||||||||  ||||||||||||||||||||||    
T  29234166 gaaccctaatccttggctgcatctcgccctatatagaaagatttttagagttccagaaagctcatcatcgtgccacacgatacgatccaatcgtggcacg 29234265  T
Q  284 atagcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtcc 383  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||| |||||||||||||||||||| |||||||||||||    
T  29234266 atagcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcgttttgctttgtgccacgaaatttccagtgctgaacctttgtcc 29234365  T
Q  384 cacgttcacttatcgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtcttttgagctcctg 483  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  29234366 cacgttcacttatcgtgccacgaaccagcttcatcgtgccacgattcttaactcttaggaatttttcatctttttctcagtttcgtcttttgagctcttg 29234465  T
Q  484 ttcctgttttggtctgatttcaccatgat 512  Q
    |||||||||||||||||||||||||||||    
T  29234466 ttcctgttttggtctgatttcaccatgat 29234494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 87 - 512
Target Start/End: Original strand, 16415234 - 16415659
Alignment:
Q  87 aacatacataactccggaccaactatgagttggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatc 186  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||     
T  16415234 aacatacataa-tcaggaccaactatgagttggtatgagattcagggcttgttcttcgatcttctgatgtcttatatgctcaaaatcgcacttcccaatt 16415332  T
Q  187 gaaccctaatccttggccgcatctcaccttatatagaaag-tttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgat 285  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||| |||||  |||| ||||||||||| |||||||||||||||||||||||||||||    
T  16415333 gaaccctaatccttggccgcatctcgccttatatagaaagatttttagagttttagaaagcccatcatcgggccacgatacgatccaatcgtggcacgat 16415432  T
Q  286 agcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtccca 385  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||||||||    
T  16415433 agcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttccattttgcttcgtgccacgaaatttccagtgctgaaactttgtccca 16415532  T
Q  386 cgttcacttatcgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtcttttgagctcctgtt 485  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||    
T  16415533 cgttcacttatcgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttttctcagtttcgtctttttagctcttgtt 16415632  T
Q  486 cctgttttggtctgatttcaccatgat 512  Q
    |||||||||||||||||||||||||||    
T  16415633 cctgttttggtctgatttcaccatgat 16415659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 87 - 512
Target Start/End: Original strand, 18516208 - 18516633
Alignment:
Q  87 aacatacataactccggaccaactatgagttggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatc 186  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||     
T  18516208 aacatacataa-tcaggaccaactatgagttggtatgagattcagggcttgttcttcgatcttctgatgtcttatatgctcaaaatcgcacttcccaatt 18516306  T
Q  187 gaaccctaatccttggccgcatctcaccttatatagaaag-tttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgat 285  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||| |||||  |||| ||||||||||| |||||||||||||||||||||||||||||    
T  18516307 gaaccctaatccttggccgcatctcgccttatatagaaagatttttagagttttagaaagcccatcatcgggccacgatacgatccaatcgtggcacgat 18516406  T
Q  286 agcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtccca 385  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||| |||| ||||||||||    
T  18516407 agcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttccattttgcttcgtgccacgaaatttccagtgctgaaactttgtccca 18516506  T
Q  386 cgttcacttatcgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtcttttgagctcctgtt 485  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||    
T  18516507 cgttcacttatcgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttttctcagtttcgtctttttagctcttgtt 18516606  T
Q  486 cctgttttggtctgatttcaccatgat 512  Q
    |||||||||||||||||||||||||||    
T  18516607 cctgttttggtctgatttcaccatgat 18516633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 312; E-Value: 1e-175
Query Start/End: Original strand, 87 - 512
Target Start/End: Original strand, 5897447 - 5897873
Alignment:
Q  87 aacatacataactccggaccaactatgagttggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaat- 185  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||        
T  5897447 aacatacataa-tcaggaccaactatgagttggtatgagattcagggcttgtccttcggtcttctgatgtcctctatgctcaaaatcgtacttccccccg 5897545  T
Q  186 cgaaccctaatccttggccgcatctcaccttatatagaaagttttt-cgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacga 284  Q
    | ||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5897546 caaaccctaatccgtggccgcatctagccttatatagaaagattttacgagttccagaaagcccatcatcgtgccacgatacgatccaatcgtggcacga 5897645  T
Q  285 tagcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtccc 384  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||    
T  5897646 tagcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacgaaatttccagtgctgaacctttgtccc 5897745  T
Q  385 acgttcacttatcgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtcttttgagctcctgt 484  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||| ||||||||||||| ||  |||||||||||||||||    
T  5897746 acgttcacttatcgtgccacgaaccagcttcatcgtggcacgattctatattcttaggaattttccatctttttctcagttcggtcttttgagctcctgt 5897845  T
Q  485 tcctgttttggtctgatttcaccatgat 512  Q
    |||||||||| |||||||||||||||||    
T  5897846 tcctgttttgatctgatttcaccatgat 5897873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 87 - 512
Target Start/End: Original strand, 5887463 - 5887889
Alignment:
Q  87 aacatacataactccggaccaactatgagttggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaat- 185  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||        
T  5887463 aacatacataa-tcaggaccaactatgagttggtatgagattcagggcttgtccttcggtcttctgatgtcctctatgctcaaaatcgtacttccccccg 5887561  T
Q  186 cgaaccctaatccttggccgcatctcaccttatatagaaagttttt-cgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacga 284  Q
    | ||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  5887562 caaaccctaatccgtggccgcatctagccttatatagaaagattttacgagttccagaaagcccatcatcgtgccacgatacgatccaatcgtggcacga 5887661  T
Q  285 tagcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtccc 384  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||  |||||||||||||||||||||||| ||||||||||||||    
T  5887662 tagcatcattaatcctacgtggcagcagacaaaacctagcatcgtggaacgttgcgatttacttcgtgccacgaaatttccagtgctgaacctttgtccc 5887761  T
Q  385 acgttcacttatcgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtcttttgagctcctgt 484  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||| ||||||||||||| || ||||||||||||||||||    
T  5887762 acgttcacttatcgtgccacgaaccagcttcatcgtggcacgattctatattcttaggaattttccatctttttctcagttccgtcttttgagctcctgt 5887861  T
Q  485 tcctgttttggtctgatttcaccatgat 512  Q
    |||||||||| | |||||||||||||||    
T  5887862 tcctgttttgatatgatttcaccatgat 5887889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 18 - 512
Target Start/End: Original strand, 6173763 - 6174260
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    |||||||||| ||||| || |||||||||| |||||||  ||  || || |||| ||||||  ||||  ||||||||||| || ||||||||||||||||    
T  6173763 catcatggcttaatcataccaagagtttagctactcatggctttacgattataaacataaataagagtgaacatacataaatctggaccaactatgagtt 6173862  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatcgaaccctaatccttggccgcatctcacctta 217  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||| | |||||||||||||||||| ||  |||||    
T  6173863 ggtatgagattcagggcttgttcttcggtctcctggtgtcttctatgctcaaaatcgcacttcccaatcaatccctaatccttggccgcagctggcctta 6173962  T
Q  218 tatagaaag-tttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaa 316  Q
    |||||||||  |||| | |||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6173963 tatagaaagaattttagggttccaaaaagcccatcatcgtgccacgatacgatccaatcgtggcacgatagcttcattaatcctacgtggcagcagacaa 6174062  T
Q  317 aacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaa-cctttgtcccacgttcacttatcgtgccacgaaccagcttc 415  Q
    ||||||||||  |||||| |||||  | ||||| |  |||||||||||||| | |||| |||||||||||||||||  |  |||||||||||| ||||||    
T  6174063 aacctagcattatggcacattgcatattgcttcataacacgaaatttccagcgctgaatcctttgtcccacgttcaaatgccgtgccacgaacaagcttc 6174162  T
Q  416 atcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtct-tttgagctcctgttcctgttttggtctgatttcaccatgat 512  Q
    ||| ||||||||| ||| |||||||||||||||| |||||||||||| |||| ||| ||||||||| |||||||||||||||||||||| ||||||||    
T  6174163 atcatggcacgatgcttcactcttaggaatttttaatctttttctcagtttcttctctttgagctcttgttcctgttttggtctgatttaaccatgat 6174260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 18 - 173
Target Start/End: Original strand, 20536988 - 20537143
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    |||||||  |||||||| |||||||||||| |||||||||||||||||| |||| |||| || |||| |||||||||||| || ||||||||||||||||    
T  20536988 catcatgtttcaatcaatctaagagtttagctactcataactaaacaattataaacatagacaagagtaaacatacataaatctggaccaactatgagtt 20537087  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatc 173  Q
    ||||||||||| ||||||||||||||||||| ||  ||  ||||||||||||||||    
T  20537088 ggtatgagattaagggcttgttcttcggtctcctagtgctttctatgctcaaaatc 20537143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 27054566 - 27054518
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    |||||||| |||||| |||||||||||| ||||||||||||||||||||    
T  27054566 tcatggcttaatcaatctaagagtttagctactcataactaaacaatca 27054518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 3305544 - 3305496
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    |||||||| |||||| ||||||||| || ||||||||||||||||||||    
T  3305544 tcatggcttaatcaatctaagagttcagctactcataactaaacaatca 3305496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 28327138 - 28327090
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    |||||||| |||||| ||||||||| || ||||||||||||||||||||    
T  28327138 tcatggcttaatcaatctaagagttcagctactcataactaaacaatca 28327090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 28330463 - 28330415
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    |||||||| |||||| ||||||||| || ||||||||||||||||||||    
T  28330463 tcatggcttaatcaatctaagagttcagctactcataactaaacaatca 28330415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 4250080 - 4250032
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    ||||| || |||||| |||||||||||| |||||||||||| |||||||    
T  4250080 tcatgacttaatcaatctaagagtttagctactcataactacacaatca 4250032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 348; Significance: 0; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 87 - 512
Target Start/End: Original strand, 24200724 - 24201146
Alignment:
Q  87 aacatacataactccggaccaactatgagttggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatc 186  Q
    ||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24200724 aacatacataa-tcaggaccaactatgagttggtatgagattcagggtttgttcttcggtcttctgatgtcttctatgctcaaaatcgcacttcccaatc 24200822  T
Q  187 gaaccctaatccttggccgcatctcaccttatatagaaag-tttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgat 285  Q
    ||||||||||||||  ||||||||| |||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24200823 gaaccctaatcctt--ccgcatctc-ccttatatagaaagatttttagagttccagaaagcccatcatcgtgccacgatacgatccaatcgtggcacgat 24200919  T
Q  286 agcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtccca 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||| |||||||||||||||    
T  24200920 agcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgaattttgcttcgtgccacgaaatttccagtgctgaacctttgtccca 24201019  T
Q  386 cgttcacttatcgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtcttttgagctcctgtt 485  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  24201020 cgttcacttatcgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttttctcagtttcgtcttttgagctcttgtt 24201119  T
Q  486 cctgttttggtctgatttcaccatgat 512  Q
    |||||||||||||||||||||||||||    
T  24201120 cctgttttggtctgatttcaccatgat 24201146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 103 - 512
Target Start/End: Original strand, 16849359 - 16849769
Alignment:
Q  103 gaccaactatgagttggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatcgaaccctaatccttgg 202  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||| |||    
T  16849359 gaccaactatgagttggtatgagattcagggcttgtccttcggtcttctgatgtcctctatgctcaaaatcgtacttccccagcgaaccctaatccgtgg 16849458  T
Q  203 ccgcatctcaccttatatagaaagttttt-cgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatccta 301  Q
    ||||||||  |||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16849459 ccgcatctagccttatatagaaagattttacgagttccagaaagcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatccta 16849558  T
Q  302 cgtggcagcagacaaaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtcccacgttcacttatcgtgc 401  Q
    |||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16849559 cgtggccgcagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacgaaatttccagtgctgaacctttgtcccacgttcacttatcgtgc 16849658  T
Q  402 cacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtcttttgagctcctgttcctgttttggtctgat 501  Q
    ||||||||||||||||||||||||||||||  | ||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||| ||||||    
T  16849659 cacgaaccagcttcatcgtggcacgattctatattcttaggaattttccatctttttctcagttccgtcttttgagctcctgttcctgttttgatctgat 16849758  T
Q  502 ttcaccatgat 512  Q
    |||||||||||    
T  16849759 ttcaccatgat 16849769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 103 - 512
Target Start/End: Original strand, 16839429 - 16839839
Alignment:
Q  103 gaccaactatgagttggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatcgaaccctaatccttgg 202  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||| |||    
T  16839429 gaccaactatgagttggtatgagattcagggcttgtccttcggtcttctgatgtcctctatgctcaaaatcgtacttccccagcgaaccctaatccgtgg 16839528  T
Q  203 ccgcatctcaccttatatagaaagttttt-cgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatccta 301  Q
    ||||||||  |||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16839529 ccgcatctagccttatatagaaagattttacgagttccagaaagcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatccta 16839628  T
Q  302 cgtggcagcagacaaaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtcccacgttcacttatcgtgc 401  Q
    |||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  16839629 cgtggccgcagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacgaaatttccagtgctgaacctttgtcccacgttcacttattgtgc 16839728  T
Q  402 cacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtcttttgagctcctgttcctgttttggtctgat 501  Q
    ||||||||||||||||||||||||||||||  | ||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||| ||||||    
T  16839729 cacgaaccagcttcatcgtggcacgattctatattcttaggaattttccatctttttctcagttccgtcttttgagctcctgttcctgttttgatctgat 16839828  T
Q  502 ttcaccatgat 512  Q
    |||||||||||    
T  16839829 ttcaccatgat 16839839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 18 - 512
Target Start/End: Complemental strand, 20981066 - 20980569
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    |||||||||||||||| || |||||||||| |||||||  ||  ||||| |||| ||||||  ||||  ||||||||||| ||| |||||||||||||||    
T  20981066 catcatggctcaatcataccaagagtttagctactcatggctttacaattataaacataaataagagtgaacatacataaatccagaccaactatgagtt 20980967  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatcgaaccctaatccttggccgcatctcacctta 217  Q
    |||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||  | |||    
T  20980966 ggtatgagattcagggctagttcttcggtctcctggtgtcttctatgctcaaaatcgcacttcccaatcgatccctaatccttggccgcaactggcttta 20980867  T
Q  218 tatagaaagtttttc-gagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaa 316  Q
    ||||||||   |||  | |||| |||| ||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||    
T  20980866 tatagaaataatttgagggttctagaaagcccatcatcgtgccacgatacgatccaatcgtggcacgattgcttcactaatcctacgtggcagcagacaa 20980767  T
Q  317 aacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaa-cctttgtcccacgttcacttatcgtgccacgaaccagcttc 415  Q
    ||||||||||||||||||||||||  | ||||||||||||||||||||||| | |||| |||||||||||||||||| ||||||||||||||| ||||||    
T  20980766 aacctagcatcgtggcacgttgcatattgcttcgtgccacgaaatttccagcgctgaatcctttgtcccacgttcacatatcgtgccacgaacaagcttc 20980667  T
Q  416 atcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtct-tttgagctcctgttcctgttttggtctgatttcaccatgat 512  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||| |||| ||| ||||||||| |||||||||||||||||||||| ||||||||    
T  20980666 atcgtggcacgattcttcactcataggaatttttcatctttttctcagtttcttctctttgagctcttgttcctgttttggtctgatttaaccatgat 20980569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 18 - 512
Target Start/End: Complemental strand, 20964163 - 20963666
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    |||||||||||||||| || |||||||||| |||||||  ||  || || |||| ||||||  ||||  ||||||||||| ||| |||||||||||| ||    
T  20964163 catcatggctcaatcataccaagagtttagctactcatggctttacgattataaacataaataagagtgaacatacataaatccagaccaactatgaatt 20964064  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatcgaaccctaatccttggccgcatctcacctta 217  Q
    |||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||| ||||||||||||| |||||||| |||||||||  |  | |||    
T  20964063 ggtatgagattcagggctagttcttcggtctcctggtgtcttctatgctcaaaatcgcacttcccaatcgatccctaatctttggccgcaattggcttta 20963964  T
Q  218 tatagaaagt-ttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaa 316  Q
    |||||||||  |||| |  |||||||| | ||||||||||||||||||||||||||||| ||||||||| || ||| ||||||||||||| |||||||||    
T  20963963 tatagaaagaattttaggattccagaaagaccatcatcgtgccacgatacgatccaatcatggcacgattgcttcactaatcctacgtggaagcagacaa 20963864  T
Q  317 aacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaa-cctttgtcccacgttcacttatcgtgccacgaaccagcttc 415  Q
    ||||||||||||||||||||||||  | |||| |||||||||||||||||| | |||| |||||||||||||||||  ||||||||||||| | ||||||    
T  20963863 aacctagcatcgtggcacgttgcatattgctttgtgccacgaaatttccagcgctgaatcctttgtcccacgttcagatatcgtgccacgagcaagcttc 20963764  T
Q  416 atcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtct-tttgagctcctgttcctgttttggtctgatttcaccatgat 512  Q
    |||||||||| |||||| |||| |||||||||||||||||||||||| |||| ||| || |||||| |||||||||||||||||||||| ||||||||    
T  20963763 atcgtggcacaattcttcactcataggaatttttcatctttttctcagtttcttctcttcgagctcttgttcctgttttggtctgatttaaccatgat 20963666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 18 - 512
Target Start/End: Original strand, 17903200 - 17903696
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    |||||||||||||||||||||||||||||| |||||||  || |||||| |||||||||||  ||||  ||||||||||| |||||||||||||||||||    
T  17903200 catcatggctcaatcaaactaagagtttagctactcatggcttaacaattataagcataaataagagtgaacatacataaatccggaccaactatgagtt 17903299  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatcga-accctaatccttggccgcatctcacctt 216  Q
    |||||  ||||||||||| |||||||||||| ||  ||||||||||||||||||||| | | | ||||| | ||||||||||||||||||| ||  | ||    
T  17903300 ggtatctgattcagggctagttcttcggtctcctagtgtcttctatgctcaaaatcgcaat-cacaatcaataccctaatccttggccgcaactggcttt 17903398  T
Q  217 atatagaaagt-ttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagaca 315  Q
     |||||||||  |||| | ||| || || |||||||||||||||||| |||||||||| ||||||||||| || |||||||||||||||||| ||||| |    
T  17903399 ttatagaaagaattttagggtttcaaaaagcccatcatcgtgccacgttacgatccaaccgtggcacgatggcttcattaatcctacgtggccgcagata 17903498  T
Q  316 aaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtcccacgttcacttatcgtgccacgaaccagcttc 415  Q
    |||||||||||||||||||||||||  | ||||||||||||||  |||||||||   | ||||||||||||||||| ||||||||||||||   | ||||    
T  17903499 aaacctagcatcgtggcacgttgcatgttgcttcgtgccacgatctttccagtgcaaatcctttgtcccacgttcaattatcgtgccacgagaaaccttc 17903598  T
Q  416 atcgtggcacgatt-cttaactcttaggaatttttcatctttttctcattttcgtct-tttgagctcctgttcctgttttggtctgatttcaccatgat 512  Q
    |  ||||||||||| ||| |||||||||||||||||||||||| ||||  ||| ||| ||||||||  |||||||||||| ||||||||||||||||||    
T  17903599 aatgtggcacgattgcttcactcttaggaatttttcatcttttcctca-gttcttctctttgagcttttgttcctgttttagtctgatttcaccatgat 17903696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 18 - 506
Target Start/End: Complemental strand, 28918078 - 28917588
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    |||||||||||||| ||| ||||||||||| |||||||  || |||||| |||||||||||  ||||  ||||||||||| |||||||||||||||||||    
T  28918078 catcatggctcaattaaattaagagtttagctactcatggcttaacaattataagcataaataagagtgaacatacataaatccggaccaactatgagtt 28917979  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatc-gaaccctaatccttggccgcatctcacctt 216  Q
    |||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||| | | | ||||| | ||||||||||||||||||| ||  | ||    
T  28917978 ggtatgagattcagggctagttcttcggtctcctggtgtcttctatgctcaaaatcgcaat-cacaatcagtaccctaatccttggccgcagctggcttt 28917880  T
Q  217 atatagaaagt-ttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagaca 315  Q
    | ||||||||  |||| | ||| ||||| ||||| |||||||||||| ||||||||||||||||||||||  | ||||||||||||||||||||||||||    
T  28917879 aaatagaaagaattttagggtttcagaa-gcccaccatcgtgccacgttacgatccaatcgtggcacgatgacttcattaatcctacgtggcagcagaca 28917781  T
Q  316 aaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtcccacgttc-acttatcgtgccacgaaccagctt 414  Q
    ||| |   |||||||||||||||||  | |||||||||||| |||||| ||| | |||| | |||||||||||||  | ||||||||||||||  | | |    
T  28917780 aaatccctcatcgtggcacgttgcatatcgcttcgtgccacaaaattttcagcggtgaaaccttgtcccacgttcttcatatcgtgccacgaaatatcct 28917681  T
Q  415 catcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtct-tttgagctcctgttcctgttttggtctgatttcac 506  Q
    || ||||||||||||||| |||||||||||||||||||||||||||||  ||| ||| ||||||||||| |||||||||||| ||||||||||    
T  28917680 caacgtggcacgattcttgactcttaggaatttttcatctttttctcaacttcttctctttgagctcctattcctgttttggcctgatttcac 28917588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 50197339 - 50197385
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaat 66  Q
    |||||||| |||||| |||||||||||| ||||||||||||||||||    
T  50197339 tcatggcttaatcaatctaagagtttagttactcataactaaacaat 50197385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 23441707 - 23441756
Alignment:
Q  19 atcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    ||||||||| |||||| ||||||||| || ||||||||||||||||||||    
T  23441707 atcatggcttaatcaatctaagagttcagctactcataactaaacaatca 23441756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 33898020 - 33897972
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    |||||||| |||||| ||||||||| || ||||||||||||||||||||    
T  33898020 tcatggcttaatcaatctaagagttcagctactcataactaaacaatca 33897972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 47
Target Start/End: Complemental strand, 49716078 - 49716049
Alignment:
Q  18 catcatggctcaatcaaactaagagtttag 47  Q
    ||||||||||||||||||||||||||||||    
T  49716078 catcatggctcaatcaaactaagagtttag 49716049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 47
Target Start/End: Complemental strand, 49719561 - 49719532
Alignment:
Q  18 catcatggctcaatcaaactaagagtttag 47  Q
    ||||||||||||||||||||||||||||||    
T  49719561 catcatggctcaatcaaactaagagtttag 49719532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 34553107 - 34553155
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    |||| ||| |||||| |||||||||||  ||||||||||||||||||||    
T  34553107 tcattgcttaatcaatctaagagtttaactactcataactaaacaatca 34553155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 339; Significance: 0; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 87 - 512
Target Start/End: Complemental strand, 2251509 - 2251084
Alignment:
Q  87 aacatacataactccggaccaactatgagttggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatc 186  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2251509 aacatacataa-tcaggaccaactatgagttggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgcacttcccaatc 2251411  T
Q  187 gaaccctaatccttggccgcatctcaccttatatagaaag-tttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgat 285  Q
    || |||||||||||||||||||||| |||||||||||||  ||||| |||||||| || ||||||||||||||||||||||||||||||| |||||||||    
T  2251410 gacccctaatccttggccgcatctcgccttatatagaaatatttttagagttccaaaaagcccatcatcgtgccacgatacgatccaatcatggcacgat 2251311  T
Q  286 agcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtccca 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||| |||||||||||||| |||||||||||||||    
T  2251310 agcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacattgcattttgcttcgtgccgcgaaatttccagtgctgaacctttgtccca 2251211  T
Q  386 cgttcacttatcgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtcttttgagctcctgtt 485  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  2251210 cgttcacttatcgtgccacgaaccagctttatcgtggcacgattcttaactcttaggaatttttcatctttttctcagtttcgtcttttgagctcttgtt 2251111  T
Q  486 cctgttttggtctgatttcaccatgat 512  Q
    ||||||||||||||||||||| |||||    
T  2251110 cctgttttggtctgatttcactatgat 2251084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 18 - 512
Target Start/End: Original strand, 23599174 - 23599669
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    |||||||||||||||| || |||||||||| ||||||| | |  || || |||| ||||||  | ||  ||||||||||| |||||||||||||||||||    
T  23599174 catcatggctcaatcataccaagagtttagctactcatgattttacgattataaacataaataacagtgaacatacataa-tccggaccaactatgagtt 23599272  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatcgaaccctaatccttggccgcatctcacctta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||  |||||    
T  23599273 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgcacttccccatcgaaccctaatccttggccgcagctggcctta 23599372  T
Q  218 tatagaaag-tttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaa 316  Q
    ||||||||| ||||| |||||||||||  |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  23599373 tatagaaagatttttggagttccagaaaacccatcatcgtgccacgatacggtccaatcgtggcacgatagcttcattaatcctacgtggcagcagacaa 23599472  T
Q  317 aacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtcccacgttcacttatcgtgccacgaaccagcttca 416  Q
    |||||||||| ||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  23599473 aacctagcattgtggcacgttgcattttgcttcgtgccacgaaatttccagtgctgaacctttgtcccacgttcacttatcgtgccacgaacaagcttca 23599572  T
Q  417 tcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtct-tttgagctcctgttcctgttttggtctgatttcaccatgat 512  Q
    | |||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  23599573 ttgtggcacgatgcttaactcttaggaatttttcatctttttctcagtttcgtctctttgagctcttgttcctgttttggtctgatttcaccatgat 23599669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 87 - 512
Target Start/End: Complemental strand, 26460103 - 26459678
Alignment:
Q  87 aacatacataactccggaccaactatgagttggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatc 186  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |    
T  26460103 aacatacataa-tcaggaccaactatgagttggtatgagattcagggcttgtccttcggtcttctgatgtcctctatgctcaaaatcgtacttcccaagc 26460005  T
Q  187 gaaccctaatccttggccgcatctcaccttatatagaaagttttt-cgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgat 285  Q
    |||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26460004 gaaccctaatccgtggccgcatctagccttatatagaaagattttacgagttccagaaagcccatcatcgtgccacgatacgatccaatcgtggcacgat 26459905  T
Q  286 agcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtccca 385  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||| |||    
T  26459904 agcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacgaaatttccagtgctgaacctttgttcca 26459805  T
Q  386 cgttcacttatcgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtcttttgagctcctgtt 485  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||| ||||||||||||| |||||||||||||||||||| |    
T  26459804 cgttcacttatcgtgccacgaaccagcttcatcgtggcacgattctatattcttaggaattttccatctttttctcagtttcgtcttttgagctcctgct 26459705  T
Q  486 cctgttttggtctgatttcaccatgat 512  Q
    ||||||||| |||||||||||||||||    
T  26459704 cctgttttgatctgatttcaccatgat 26459678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 18 - 512
Target Start/End: Original strand, 748456 - 748951
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    |||||||||||||||| ||||||| ||||| ||||||||||||| |||| |||||||||||| ||||  ||||||||||| |||||||||||||||||||    
T  748456 catcatggctcaatcagactaagaatttagctactcataactaa-caattataagcataaacaagagtgaacatacataaatccggaccaactatgagtt 748554  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatc-gaaccctaatccttggccgcatctcacctt 216  Q
    |||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||| |  ||  |||| | ||||||||||||||||||| ||  | ||    
T  748555 ggtatgagattcagggctagttcttcggtctcctggtgtcttctatgctcaaaatcgca-atcaaaatcggtaccctaatccttggccgcagctggcttt 748653  T
Q  217 atatagaaag-tttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagaca 315  Q
    ||||||||||  |||| | ||| || || || || |||||||||| | |||||||||||||||||||||| || |||||||||||||||| |||||||||    
T  748654 atatagaaagaattttagggtt-caaaaagctcaccatcgtgccaagttacgatccaatcgtggcacgatggcttcattaatcctacgtgacagcagaca 748752  T
Q  316 aaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaa-cctttgtcccacgttcacttatcgtgccacgaaccagctt 414  Q
    |||||||||||||| ||||||||||  | ||||| ||||||||||||||||||| |||| |||||||||||||||||  ||| ||||||||||  | |||    
T  748753 aaacctagcatcgtagcacgttgcatattgcttcttgccacgaaatttccagtgctgaatcctttgtcccacgttcaaatattgtgccacgaagtacctt 748852  T
Q  415 catcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtct-tttgagctcctgttcctgttttggtctgatttcaccatgat 512  Q
       | ||||||||| ||| ||||||||||| ||||||||||||||||| |||| ||| ||||| ||| ||||| | |||||||||||||||||||||||    
T  748853 tgacatggcacgatgcttcactcttaggaaattttcatctttttctcagtttcttctgtttgaactcttgttcttattttggtctgatttcaccatgat 748951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 18 - 512
Target Start/End: Original strand, 710429 - 710927
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    |||||||||||||||| || |||||||||| |||||||   |  || || |||| ||||||  ||||  ||||||||||| | |||||||||||||||||    
T  710429 catcatggctcaatcataccaagagtttagctactcatggttttacgattataaacataaataagagtgaacatacataaattcggaccaactatgagtt 710528  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatcgaaccctaatccttggccgcatctcacctta 217  Q
    ||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||| ||||| |||||||   |  || ||| |||||| ||  | |||    
T  710529 ggtatgagatttagggcttgttcttcggtctcctggtgtcttctatgctcaaaatcgcacttcacaatcgatatcccattcttcgccgcaactggcttta 710628  T
Q  218 tatagaaagtttttcgagttccagaac-gcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaa 316  Q
    |||||||||  ||| | |||||||||  || |||||||||||||||||||||||||||||||||| ||| ||  || ||||||||||||||| |||||||    
T  710629 tatagaaagaatttagggttccagaaaagctcatcatcgtgccacgatacgatccaatcgtggcatgattgctccactaatcctacgtggcaacagacaa 710728  T
Q  317 aacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtcccacgttcacttatcgtgccacgaaccagcttca 416  Q
    ||||||||||||||||||||| ||  | |||||||||||| |||||| ||| | | || | ||||||||||||||| ||||||||||||||| |||| ||    
T  710729 aacctagcatcgtggcacgttacatattgcttcgtgccacaaaattttcagcgctcaaaccttgtcccacgttcacctatcgtgccacgaacaagctcca 710828  T
Q  417 tcgtggcacgattcttaactcttaggaa--tttttcatctttttctcattttcgtct-tttgagctcctgttcctgttttggtctgatttcaccatgat 512  Q
    |||||||||||| ||| |||||||||||  |||||||||||||||||| |||| ||| ||||||||| ||||||||||||||||| |||| ||||||||    
T  710829 tcgtggcacgatgcttcactcttaggaatttttttcatctttttctcagtttcttctctttgagctcttgttcctgttttggtctaatttaaccatgat 710927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 18 - 512
Target Start/End: Complemental strand, 20100348 - 20099857
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    |||||||||||||||||||||||||||||| |||||||| |||| |||| ||||||| |||  || |  ||||||||||| |   |||||||||||||||    
T  20100348 catcatggctcaatcaaactaagagtttagctactcatagctaa-caattataagcagaaataagggtgaacatacataaat---gaccaactatgagtt 20100253  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatcga-accctaatccttggccgcatctcacctt 216  Q
    |||||||||||||||||| ||||||||||||  || ||||||||||||||||||||| | | |  |||||  ||||||||||||||| ||| ||  | ||    
T  20100252 ggtatgagattcagggctagttcttcggtctcatggtgtcttctatgctcaaaatcgcaat-caaaatcggtaccctaatccttggc-gcaactggcttt 20100155  T
Q  217 atatagaaagttt-ttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagaca 315  Q
    ||||||||||  | || | ||| ||||| ||||| |||||||||||| |||||||||||||||||| ||| || ||| || |||||||||||||||||||    
T  20100154 atatagaaagaatattagggtttcagaaagcccaccatcgtgccacgttacgatccaatcgtggcatgatggcttcactattcctacgtggcagcagaca 20100055  T
Q  316 aaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaa-cctttgtcccacgttcacttatcgtgccacgaaccagctt 414  Q
    ||| |||||||| ||||||||||||  | |||||||||||||||| |||||||| |||| |||||||||||||||||  |||||||||| |||| |||||    
T  20100054 aaatctagcatcatggcacgttgcacattgcttcgtgccacgaaaattccagtgctgaatcctttgtcccacgttcaaatatcgtgccatgaactagctt 20099955  T
Q  415 catcgtggcacgattcttaactcttaggaattttt-catctttttctcattttcgtcttttgagctcctgttcctgttttggtctgatttcaccatgat 512  Q
    || ||||||||||| ||| |||||| | ||||||| ||||||||||||| ||   || ||||||||| |||||||||||||||||||||||||||||||    
T  20099954 caacgtggcacgatgcttcactcttcgaaatttttccatctttttctcaattctctc-tttgagctcttgttcctgttttggtctgatttcaccatgat 20099857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 19 - 512
Target Start/End: Complemental strand, 2349178 - 2348683
Alignment:
Q  19 atcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagttg 118  Q
    ||||||||||||||| |||||||||| |  || | ||| |||| |||| |||||||||||| ||||  ||||||||||| ||||||||||||||||||||    
T  2349178 atcatggctcaatcagactaagagttcaactaattatagctaa-caattataagcataaacaagagtgaacatacataaatccggaccaactatgagttg 2349080  T
Q  119 gtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatcgaaccctaatccttggccgcatctcaccttat 218  Q
    ||||||||||||| ||| |||||||||||| ||| ||||||||||||||||||||| | |    | | | ||| |||||||| |||||| ||  | ||||    
T  2349079 gtatgagattcagagctagttcttcggtctcctggtgtcttctatgctcaaaatcgcaatcaaaattggtaccttaatccttagccgcagctggctttat 2348980  T
Q  219 atagaaagt-ttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaaa 317  Q
    ||||||||  |||| | ||| || || ||||| |  ||||||||| |||||||| ||||||||  ||| || |||||||| |||||||||||||||||||    
T  2348979 atagaaagaattttagggtttcaaaaagcccacctccgtgccacgttacgatcccatcgtggcgtgatggcttcattaattctacgtggcagcagacaaa 2348880  T
Q  318 acctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaa-cctttgtcccacgttcacttatcgtgccacgaaccagcttca 416  Q
    | || |||||| | ||| |||||  | ||||||||||||||||||||||||| |||| |||||||||||||||| | ||||||| ||||||  | |||||    
T  2348879 atctcgcatcgcgacacattgcatattgcttcgtgccacgaaatttccagtgctgaatcctttgtcccacgttctcatatcgtgacacgaagtaccttca 2348780  T
Q  417 tcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtct-tttgagctcctgttcctgttttggtctgatttcaccatgat 512  Q
     ||||||||||| ||| ||||||| ||||||||||||||||||||| |||| ||| ||||||||| |||||||||||||||||||||||||||||||    
T  2348779 acgtggcacgatgcttcactcttaagaatttttcatctttttctcagtttcttctctttgagctcttgttcctgttttggtctgatttcaccatgat 2348683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 61 - 174
Target Start/End: Original strand, 42606158 - 42606271
Alignment:
Q  61 aacaatcataagcataaactagagaaaacatacataactccggaccaactatgagttggtatgagattcagggcttgttcttcggtcttctgatgtcttc 160  Q
    |||||| ||||| |||||  ||||  ||||||||||| | ||||| |||||||||||||||||||||||||||||  ||||||| ||| ||  |||||||    
T  42606158 aacaattataagtataaataagagtgaacatacataaattcggactaactatgagttggtatgagattcagggctaattcttcgatctcctagtgtcttc 42606257  T
Q  161 tatgctcaaaatcg 174  Q
    ||||||||||||||    
T  42606258 tatgctcaaaatcg 42606271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 12803687 - 12803735
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    |||||||| |||||| |||||||||||| ||||||||||||||||||||    
T  12803687 tcatggcttaatcaatctaagagtttagctactcataactaaacaatca 12803735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 38431088 - 38431040
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    |||||||| |||||| |||||||||||| ||||||||||||||||||||    
T  38431088 tcatggcttaatcaatctaagagtttagctactcataactaaacaatca 38431040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 6963982 - 6963935
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatc 67  Q
    |||||||| |||||| |||||||||||| |||||||||||||||||||    
T  6963982 tcatggcttaatcaatctaagagtttagctactcataactaaacaatc 6963935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 26152846 - 26152800
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaat 66  Q
    |||||||| |||||| |||||||||||| ||||||||||||||||||    
T  26152846 tcatggcttaatcaatctaagagtttagctactcataactaaacaat 26152800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 3541590 - 3541638
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    ||||| || |||||| |||||||||||| ||||||||||||||||||||    
T  3541590 tcatgacttaatcaatctaagagtttagctactcataactaaacaatca 3541638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 44018216 - 44018264
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    |||||||| |||||| ||||||||| || ||||||||||||||||||||    
T  44018216 tcatggcttaatcaatctaagagttcagctactcataactaaacaatca 44018264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 43548888 - 43548842
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaat 66  Q
    |||||||| ||||||  ||||||||||| ||||||||||||||||||    
T  43548888 tcatggcttaatcaatataagagtttagctactcataactaaacaat 43548842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 28578321 - 28578362
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaa 61  Q
    ||||||||||||||| |||| ||||||| |||||||||||||    
T  28578321 tcatggctcaatcaatctaaaagtttagctactcataactaa 28578362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 335; Significance: 0; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 87 - 512
Target Start/End: Original strand, 49637004 - 49637429
Alignment:
Q  87 aacatacataactccggaccaactatgagttggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatc 186  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |    
T  49637004 aacatacataa-tcaggaccaactatgagttggtatgagattcagggcttgtccttcggtcttctgatgtcctctatgctcaaaatcgtacttcccaagc 49637102  T
Q  187 gaaccctaatccttggccgcatctcaccttatatagaaagttttt-cgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgat 285  Q
    |||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  49637103 gaaccctaatccgtggccgcatctagccttatatagaaagattttacgagttccagaaagcccatcatcgtgccacgatacgatccaatcgtggcacgat 49637202  T
Q  286 agcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtccca 385  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||| |||||||||||||||    
T  49637203 agcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacgaaatatccagtgctgaacctttgtccca 49637302  T
Q  386 cgttcacttatcgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtcttttgagctcctgtt 485  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  49637303 cgttcacttatcgtgccacgaaccagcttcatcgtggcacgattctatattcttaggaattttccatctttttctcagtttcgtcttttgagctcctgtt 49637402  T
Q  486 cctgttttggtctgatttcaccatgat 512  Q
    ||||||||| |||||||||||||||||    
T  49637403 cctgttttgatctgatttcaccatgat 49637429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 87 - 512
Target Start/End: Complemental strand, 3733951 - 3733526
Alignment:
Q  87 aacatacataactccggaccaactatgagttggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatc 186  Q
    ||||||||||| || ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |    
T  3733951 aacatacataa-tcgggaccaactatgagttggtatgagattaagggcttgtccttcggtcttctgatgtcctctatgctcaaaatcgtacttcccaagc 3733853  T
Q  187 gaaccctaatccttggccgcatctcaccttatatagaaagttttt-cgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgat 285  Q
    |||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3733852 gaaccctaatccgtggccgcatctagccttatatagaaagattttacgagttccagaaagcccatcatcgtgccacgatacgatccaatcgtggcacgat 3733753  T
Q  286 agcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtccca 385  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||    
T  3733752 agcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacgaaatttccagtgctgaacctttgtccca 3733653  T
Q  386 cgttcacttatcgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtcttttgagctcctgtt 485  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||| ||||||||||||| || |||||||||||||||||||    
T  3733652 cgttcacttatcgtgccacgaaccagcttcatcgtggcacgattctatattcttaggaattttccatctttttctcagttccgtcttttgagctcctgtt 3733553  T
Q  486 cctgttttggtctgatttcaccatgat 512  Q
    ||||||||| | |||||||||||||||    
T  3733552 cctgttttgatatgatttcaccatgat 3733526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 87 - 512
Target Start/End: Original strand, 49640297 - 49640722
Alignment:
Q  87 aacatacataactccggaccaactatgagttggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatc 186  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |    
T  49640297 aacatacataa-tcaggaccaactatgagttggtatgagattcagggcttgtccttcggtcttctgatgtcctctatgctcaaaatcgtacttcccaagc 49640395  T
Q  187 gaaccctaatccttggccgcatctcaccttatatagaaagttttt-cgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgat 285  Q
    ||||| |||||| |||||||||||  |||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  49640396 gaaccttaatccgtggccgcatctagccttatatagaaagattttacgagttccagaaagcccatcatcgtgccacgatacgatccaatcgtggcacgat 49640495  T
Q  286 agcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtccca 385  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||    
T  49640496 agcatcattaatcctacgtggcagcagacaaaacccagcatcgtggcacgttgcgatttgcttcgtgccacgaaatttccagtgctgaacctttgtccca 49640595  T
Q  386 cgttcacttatcgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtcttttgagctcctgtt 485  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||| ||||||||||||| |||||| |||||||||||||||    
T  49640596 cgttcacttatcgtgccacgaaccagcttcatcgtggcacgattctatattcttaggaattttccatctttttctcagtttcgttttttgagctcctgtt 49640695  T
Q  486 cctgttttggtctgatttcaccatgat 512  Q
    ||||||||| |||||||||||||||||    
T  49640696 cctgttttgatctgatttcaccatgat 49640722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 317; E-Value: 1e-178
Query Start/End: Original strand, 18 - 512
Target Start/End: Original strand, 3719908 - 3720404
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    |||||||||||||||| || |||||||||| |||||||   |  || ||||||| ||||||  ||||  ||||||||||| |||||||||||||||||||    
T  3719908 catcatggctcaatcataccaagagtttagctactcatggttttacgatcataaacataaataagagtgaacatacataaatccggaccaactatgagtt 3720007  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatcgaaccctaatccttggccgcatctcacctta 217  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||| ||||||| | |||||||||||||||| ||   ||||    
T  3720008 ggtatgagattcagggcttgttcttcggtctcctgatgtcttctatgctcaaaatctcacttcacaatcgatctctaatccttggccgcagctggtctta 3720107  T
Q  218 tatagaaagt-ttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaa 316  Q
    |||||||||  |||| | ||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  3720108 tatagaaagaattttagggttccagaaagcccatcatcgtgccacgatacgatccaatcgtggcacaatagcttcattaatcctacgtggcagcagacaa 3720207  T
Q  317 aacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtcccacgttcacttatcgtgccacgaaccagcttca 416  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  3720208 aacctagcatcgtggcacgttgcattttgcttcgtgccacgaaatttccagtgctgaacctttgtcccacgttcacttatcgtgccacgaacaagcttca 3720307  T
Q  417 tcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtct-tttgagctcctgttcctgttttggtctgatttcaccatgat 512  Q
    | |||||||||| ||| |||||||| |||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  3720308 ttgtggcacgatgctttactcttagtaatttttcatctttttctcagtttcgtctctttgagctcttgttcctgttttggtctgatttcaccatgat 3720404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 18 - 512
Target Start/End: Complemental strand, 14701612 - 14701114
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    |||||||||||||||| || |||||||||  |||||||   |  |  || |||| ||||||  ||||  ||||||||||| |||| ||||||||||||||    
T  14701612 catcatggctcaatcataccaagagtttatctactcatggttttatgattataaacataaataagagtgaacatacataaatccgaaccaactatgagtt 14701513  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatcgaaccctaatccttggccgcatctcacctta 217  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||| |||||||  ||  || ||| |||||| ||  | |||    
T  14701512 ggtatgagattcagggcttgttcttcggtctcctggtgtcttctatgctcaaaatcgcacttcacaatcgataccccattcttcgccgcaactggcttta 14701413  T
Q  218 tatagaaagtttttcgagttccagaac-gcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaa 316  Q
    |||||||||  ||| | |||||||||  ||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||    
T  14701412 tatagaaagaatttagggttccagaaaagcccatcatcgtgccacgatacgatccaatcgtggcacgattgcttcactaatcctacgtggcagcagacaa 14701313  T
Q  317 aacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtg-ttgaacctttgtcccacgttcacttatcgtgccacgaaccagcttc 415  Q
    ||||||||||||||||||||| ||  | ||||||||||| ||||| ||||  | |  |||||||||||||||||||| || |||||||||||| |||| |    
T  14701312 aacctagcatcgtggcacgttacatattgcttcgtgccatgaaatgtccaacgctcaaacctttgtcccacgttcacctaccgtgccacgaacaagctcc 14701213  T
Q  416 atcgtggcacgattcttaactcttaggaa-tttttcatctttttctcattttcgtct-tttgagctcctgttcctgttttggtctgatttcaccatgat 512  Q
    ||||||||||| | ||| |||||| |||| |||||||||||||||||| |||| ||| ||||||||| |||||||||||||||||||||| ||||||||    
T  14701212 atcgtggcacgctgcttcactcttgggaattttttcatctttttctcagtttcttctctttgagctcttgttcctgttttggtctgatttaaccatgat 14701114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 18 - 511
Target Start/End: Complemental strand, 23652985 - 23652509
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  23652985 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataaatccggaccaactatgagtt 23652886  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatcgaaccctaatccttggccgcatctcacctta 217  Q
    |||||||||||||||||||        |||| ||| |||||||||||||||||||||           |  ||||||||| |||||| || ||  | |||    
T  23652885 ggtatgagattcagggctt--------gtctcctggtgtcttctatgctcaaaatcg-----------cataccctaatctttggccacaactggcttta 23652805  T
Q  218 tatagaaagtttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaaa 317  Q
    |||||||||  ||| ||||| ||| | | |||||||||||||||| || |||| ||||||||||||||  | || ||||||||| |||||||||||||||    
T  23652804 tatagaaagaatttagagtttcagtaagtccatcatcgtgccacgttatgatctaatcgtggcacgatcacttcgttaatcctatgtggcagcagacaaa 23652705  T
Q  318 acctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaa-cctttgtcccacgttcacttatcgtgccacgaaccagcttca 416  Q
    ||||||||||||| |||||| ||   | |||||||| ||||||||| ||||| ||||   |||||||||||||||| ||| ||||||||| | | ||| |    
T  23652704 acctagcatcgtgacacgtttcataaaccttcgtgcaacgaaattttcagtgatgaatattttgtcccacgttcacatattgtgccacgagctatcttta 23652605  T
Q  417 tcgtggcacgattcttaactcttaggaatttttcatctttttctc-attttcgtcttttgagctcctgttcctgttttggtctgatttcaccatga 511  Q
     ||||||||| ||||| |||||||||||||||||   || ||| | |||||| ||||||| |||| | ||||||||||| ||||||||||||||||    
T  23652604 acgtggcacggttcttcactcttaggaatttttccatttcttcacaattttcttcttttgggctctttttcctgttttgatctgatttcaccatga 23652509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 56089738 - 56089786
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    |||||||| |||||| |||||||||||| ||||||||||||||||||||    
T  56089738 tcatggcttaatcaatctaagagtttagctactcataactaaacaatca 56089786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 11560517 - 11560470
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaa 65  Q
    ||||||| ||||||||||| |||||||||| |||||||||||||||||    
T  11560517 catcatgtctcaatcaaaccaagagtttagctactcataactaaacaa 11560470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 19928372 - 19928306
Alignment:
Q  245 gcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagca 311  Q
    |||||||||||||||||| | |||| | |||||||||||||    ||||||||||||||||||||||    
T  19928372 gcccatcatcgtgccacgtttcgataccatcgtggcacgatttactcattaatcctacgtggcagca 19928306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 13978828 - 13978780
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    |||||| | |||||| |||||||||||| ||||||||||||||||||||    
T  13978828 tcatggtttaatcaatctaagagtttagctactcataactaaacaatca 13978780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 15850868 - 15850820
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    |||||||| |||||| |||||||||||| |||| |||||||||||||||    
T  15850868 tcatggcttaatcaatctaagagtttagctacttataactaaacaatca 15850820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 26703914 - 26703962
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    |||||||| |||||| |||||||||||| |||||||||| |||||||||    
T  26703914 tcatggcttaatcaatctaagagtttagctactcataaccaaacaatca 26703962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 19928589 - 19928550
Alignment:
Q  29 aatcaaactaagagtttagatactcataactaaacaatca 68  Q
    |||||| |||||||||||| ||||||||||||||||||||    
T  19928589 aatcaatctaagagtttagctactcataactaaacaatca 19928550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 331; Significance: 0; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 87 - 512
Target Start/End: Complemental strand, 18938532 - 18938107
Alignment:
Q  87 aacatacataactccggaccaactatgagttggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatc 186  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |    
T  18938532 aacatacataa-tcaggaccaactatgagttggtatgagattcagggcttgtccttcggtcttctgatgtcctctatgctcaaaatcgtacttcccaagc 18938434  T
Q  187 gaaccctaatccttggccgcatctcaccttatatagaaagttttt-cgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgat 285  Q
    |||||||||||| |||||||||||  |||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18938433 gaaccctaatccgtggccgcatctagccttatatagaaagattttacgagttccagaaagcccatcatcgtgccacgatacgatccaatcgtggcacgat 18938334  T
Q  286 agcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtccca 385  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| | |||||||||||||||    
T  18938333 agcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcgatttgcttcgtgccacgaaatttccagagctgaacctttgtccca 18938234  T
Q  386 cgttcacttatcgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtcttttgagctcctgtt 485  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||| ||||||||||||| || |||||||||||||||||||    
T  18938233 cgttcacttatcgtgccacgaaccagcttcatcgtggcacgattctatattcttaggaattttccatctttttctcagttccgtcttttgagctcctgtt 18938134  T
Q  486 cctgttttggtctgatttcaccatgat 512  Q
    ||||||||| |||||||||||||||||    
T  18938133 cctgttttgatctgatttcaccatgat 18938107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 18 - 512
Target Start/End: Complemental strand, 18011654 - 18011158
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    |||||||||||||||||||||||||||||| |||||||| |||| |||| |||||||||||  ||||  ||||||||||| |||||||||||||||||||    
T  18011654 catcatggctcaatcaaactaagagtttagctactcatagctaa-caattataagcataaataagagtgaacatacataaatccggaccaactatgagtt 18011556  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatc-gaaccctaatccttggccgcatctcacctt 216  Q
     ||||||||||||||||| |||||||||||| | | ||||||||||||||||||||| |  ||  |||| | ||||||||| ||||||||| ||  | ||    
T  18011555 tgtatgagattcagggctagttcttcggtctccaggtgtcttctatgctcaaaatcgca-atcaaaatcggtaccctaatctttggccgcagctggcttt 18011457  T
Q  217 atatagaaag-tttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagaca 315  Q
    ||||||||||  |||| | |||  |||| ||||| ||| |||||||| |||||||||||||||||| ||| || |||||||||||| |||||||||||||    
T  18011456 atatagaaagaattttagggttttagaaagcccaccattgtgccacgttacgatccaatcgtggcaagatggcttcattaatcctatgtggcagcagaca 18011357  T
Q  316 aaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaa-cctttgtcccacgttcacttatcgtgccacgaaccagctt 414  Q
    |||||||||||||||||||||||||  | |||| |||| |||||||||||||||||||| ||||||||||| |||| | ||| |||||||||   | ||     
T  18011356 aaacctagcatcgtggcacgttgcatattgctttgtgctacgaaatttccagtgttgaatcctttgtcccatgttctcatattgtgccacgatata-cta 18011258  T
Q  415 c-atcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtct-tttgagctcctgttcctgttttggtctgatttcaccatgat 512  Q
    | | ||||||||||||||| ||| ||||||||||||||||||||||||| |||| ||| ||||||||| ||||||| ||||||| |||| ||||||||||    
T  18011257 caaacgtggcacgattctttacttttaggaatttttcatctttttctcagtttcttctctttgagctcttgttcctattttggtttgatgtcaccatgat 18011158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 18 - 512
Target Start/End: Complemental strand, 22592221 - 22591721
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    |||||||||||||||| || |||||||||| |||||||   |  || || |||| |||| |  ||||  ||||||||||| |||||||||||||||||||    
T  22592221 catcatggctcaatcataccaagagtttagctactcatggttttacgattataaacatacataagagtgaacatacataaatccggaccaactatgagtt 22592122  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatcga-accctaatccttggccgcatctcacctt 216  Q
    | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||  || ||| |||||| ||  | ||    
T  22592121 gatatgagattcagagcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtccttcc-aatcgatacccacattcttcgccgcaactggcttt 22592023  T
Q  217 atatagaaagtttttcgagttccagaac-gcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagaca 315  Q
    ||||||||||  ||| | |||||||||  |||||| |||||||||||||  |||||||||||||||||||  |  ||||| |||||||||||||||||||    
T  22592022 atatagaaagaatttagggttccagaaaagcccattatcgtgccacgatgtgatccaatcgtggcacgattcctccattagtcctacgtggcagcagaca 22591923  T
Q  316 aaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtg-ttgaacctttgtcccacgttcacttatcgtgccacgaaccagctt 414  Q
    |||||||||||||||||||||||||  | |||||||||||||||||||||||||  | |||| ||||||||||||||   |||||||||||| | ||||     
T  22591922 aaacctagcatcgtggcacgttgcatattgcttcgtgccacgaaatttccagtgcatcaacc-ttgtcccacgttcatcgatcgtgccacgagcaagctc 22591824  T
Q  415 catcgtggcacgattcttaactcttagga----atttttcatctttttctcattttcgt-cttttgagctcctgttcctgttttggtctgatttcaccat 509  Q
    |||||||||||||| ||| |||||| |||     |||||||||||||||||| |||| | | ||||||||| |||||||||||||||||||||| |||||    
T  22591823 catcgtggcacgatgcttcactcttgggagtttttttttcatctttttctcagtttcttccctttgagctcttgttcctgttttggtctgatttaaccat 22591724  T
Q  510 gat 512  Q
    |||    
T  22591723 gat 22591721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 116 - 317
Target Start/End: Original strand, 2648855 - 2649057
Alignment:
Q  116 ttggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatcga-accctaatccttggccgcatctcacc 214  Q
    ||||| |||||||||||||| |||||||||||| ||| ||||||||||  ||||||||| | | |  |||||  ||||||||||||||||||| ||  |     
T  2648855 ttggtgtgagattcagggctagttcttcggtctcctggtgtcttctatattcaaaatcgcaat-caaaatcggtaccctaatccttggccgcagctggct 2648953  T
Q  215 ttatatagaaagt-ttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcaga 313  Q
    |||||||||||   |||| | ||| ||||| ||||| |||||||||||| ||||||||||||||| ||||||  | ||||||||||||||||||||||||    
T  2648954 ttatatagaaaaaattttagggtttcagaaagcccaccatcgtgccacgttacgatccaatcgtgacacgatcacctcattaatcctacgtggcagcaga 2649053  T
Q  314 caaa 317  Q
    ||||    
T  2649054 caaa 2649057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 40678196 - 40678244
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    |||||||| |||||| ||||||||| || ||||||||||||||||||||    
T  40678196 tcatggcttaatcaatctaagagttcagctactcataactaaacaatca 40678244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 511
Target Start/End: Original strand, 2649159 - 2649253
Alignment:
Q  418 cgtggcacgattcttaactcttaggaatttttc-atctttttctcattttcgtcttttgagctcctgttcctgttttggtctgatttcaccatga 511  Q
    ||||||||||| ||| ||||||||| ||||||| |||||||  ||| ||||  || || ||||| |||| |||||||| ||||||||||| ||||    
T  2649159 cgtggcacgatgcttcactcttaggcatttttcaatcttttcatcaatttctcctcttaagctcttgttactgttttgatctgatttcactatga 2649253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 47
Target Start/End: Complemental strand, 29435458 - 29435429
Alignment:
Q  18 catcatggctcaatcaaactaagagtttag 47  Q
    ||||||||||||||||||||||||||||||    
T  29435458 catcatggctcaatcaaactaagagtttag 29435429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 38316470 - 38316519
Alignment:
Q  20 tcatggctcaatcaaa-ctaagagtttagatactcataactaaacaatca 68  Q
    |||||||| ||||||| |||| ||||||| ||||||||||||||||||||    
T  38316470 tcatggcttaatcaaatctaatagtttagctactcataactaaacaatca 38316519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 321; Significance: 0; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 18 - 512
Target Start/End: Complemental strand, 26726653 - 26726157
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    |||||||||||||||| || |||||||||| |||||||   |  || || |||| ||||||  ||||  ||||||||||| |||||||| ||||||||||    
T  26726653 catcatggctcaatcataccaagagtttagctactcatgtttttacgattataaacataaataagagtcaacatacataaatccggacccactatgagtt 26726554  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatcgaaccctaatccttggccgcatctcacctta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||  |||||    
T  26726553 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgcacttcccaatcgaaccataatccttggccgcagctggcctta 26726454  T
Q  218 tatagaaag-tttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaa 316  Q
    ||||||||| ||||| ||||| ||||| ||||||||||||||||||||| ||||||| |||||||||||||| |||||||||| || |||||||||||||    
T  26726453 tatagaaagatttttagagtttcagaaagcccatcatcgtgccacgatatgatccaaacgtggcacgatagcttcattaatcccacatggcagcagacaa 26726354  T
Q  317 aacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtcccacgttcacttatcgtgccacgaaccagcttca 416  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||    
T  26726353 aacctagcatcgtggcacgttgcattttgcttcgtgccacgaaatttccagtgctgaacctttgtcccacgttaacttatcgtgccacgaacaagcttca 26726254  T
Q  417 tcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtct-tttgagctcctgttcctgttttggtctgatttcaccatgat 512  Q
    ||||||||| || ||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||| |||||||||||||||||||||||    
T  26726253 tcgtggcaccatgcttaactcttaggaatttttcatctttttctcagtttcgtctctttgagctcttgttccttttttggtctgatttcaccatgat 26726157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 21 - 512
Target Start/End: Original strand, 4732249 - 4732730
Alignment:
Q  21 catggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagttggt 120  Q
    ||||||||||||||||||||||||||| |||||||| |||| |||| |||||||||||  ||||  ||||||||||| |||||| |||||||||||||||    
T  4732249 catggctcaatcaaactaagagtttagctactcatagctaa-caattataagcataaataagagtgaacatacataaatccggatcaactatgagttggt 4732347  T
Q  121 atgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatcgaaccctaatccttggccgcatctcaccttatat 220  Q
    ||||||||||||||| ||||| |||||| ||| |||||||||||||||||||||   |            ||||||||||||||||| ||  | ||||||    
T  4732348 atgagattcagggctagttctccggtctcctggtgtcttctatgctcaaaatcggttt------------cctaatccttggccgcagctggctttatat 4732435  T
Q  221 agaaagt-ttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaaaac 319  Q
    ||||||  |||| | ||| ||||| ||||| |||||||||||| |||||||||||||||||||||| || |||||||||||| |||||||||||||||||    
T  4732436 agaaagaattttagggtttcagaaagcccaccatcgtgccacgttacgatccaatcgtggcacgatggcttcattaatcctaagtggcagcagacaaaac 4732535  T
Q  320 ctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaa-cctttgtcccacgttcacttatcgtgccacgaaccagcttcatc 418  Q
    |||||||||||||||||||||  | ||||||||||| |||||||||||||||||| ||||||||||||||||   ||||||||||||||| | ||||| |    
T  4732536 ctagcatcgtggcacgttgcatattgcttcgtgccatgaaatttccagtgttgaatcctttgtcccacgttcgactatcgtgccacgaactaccttcaac 4732635  T
Q  419 gtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtct-tttgagctcctgttcctgttttggtctgatttcaccatgat 512  Q
    |||||||||| ||| |||||||  |||||||||||||||||||| |||| ||| ||||| ||| |||||||||||| ||||||||||||||||||    
T  4732636 gtggcacgatgcttcactcttataaatttttcatctttttctcagtttcttctctttgaactcttgttcctgttttagtctgatttcaccatgat 4732730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 18 - 317
Target Start/End: Complemental strand, 25185090 - 25184789
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    |||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||    
T  25185090 catcatggctcaatcaaactaagagtttaaccactcataactaaacaatcataagcataaacaagagtaaacatacataaatccggaccaactatgagtt 25184991  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatc-gaaccctaatccttggccgcatctcacctt 216  Q
    ||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||| | |  |   |||| |  |||||||||||||| ||||||  | ||    
T  25184990 ggtatgagattcagggcttgttctttggtctcctggtgtcttctatgctcaaaattgca-ataataatcggtgccctaatccttggctgcatctagcttt 25184892  T
Q  217 atatagaa--agtttttcgagttccag-aacgcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcaga 313  Q
    ||||||||  | ||||| | ||| ||| || |||||||||||||||||| |||||||||||| |||||||||  | ||||||||||||||||||||||||    
T  25184891 atatagaacgaattttttg-gtttcagaaaagcccatcatcgtgccacgttacgatccaatcatggcacgatcacttcattaatcctacgtggcagcaga 25184793  T
Q  314 caaa 317  Q
    ||||    
T  25184792 caaa 25184789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 9690457 - 9690360
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    ||||||||||||||| |||| ||||||| |||||||||||||||||||| |  |||| |  | || ||||||||||||  | | ||||||||||||||    
T  9690457 tcatggctcaatcaatctaatagtttagctactcataactaaacaatcaaatacatagaaaatagtaaacatacataaaccagaaccaactatgagtt 9690360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 2500431 - 2500479
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    |||||||| |||||| |||||||||||| ||||||||||||||||||||    
T  2500431 tcatggcttaatcaatctaagagtttagctactcataactaaacaatca 2500479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 26337677 - 26337629
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    |||||||| |||||| |||||||||||| ||||||||||||||||||||    
T  26337677 tcatggcttaatcaatctaagagtttagctactcataactaaacaatca 26337629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 35432900 - 35432947
Alignment:
Q  21 catggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    ||||||| |||||| |||||||||||  ||||||||||||||||||||    
T  35432900 catggcttaatcaatctaagagtttatttactcataactaaacaatca 35432947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 33321347 - 33321393
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaat 66  Q
    ||||| || |||||| |||||||||||| ||||||||||||||||||    
T  33321347 tcatgacttaatcaatctaagagtttagctactcataactaaacaat 33321393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 87 - 512
Target Start/End: Complemental strand, 26999 - 26574
Alignment:
Q  87 aacatacataactccggaccaactatgagttggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaa-t 185  Q
    ||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||| |||||||||| || |    
T  26999 aacatacataa-tctggaccaacgatgagttggtatgagattcagggcttgttcttcagtctgctgatgtcttatatgctcaaattcgtacttccaaaat 26901  T
Q  186 cgaaccctaatccttggccgcatctcaccttatatagaaag-tttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacga 284  Q
    | ||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  26900 ccaacccta-tccttggccgcatctcaccttatatagaaagatttttcaagttccagaaagcccatcatcgtgccacgatacggtccaatcgtggcacga 26802  T
Q  285 tagcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtccc 384  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  26801 tagcatcattaaacctacgtggcagcagacaaaacctagcatcgtggcacgttgcaatttgcttcgtgccacgaaatttccagtgctgaacctttgtccc 26702  T
Q  385 acgttcacttatcgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtcttttgagctcctgt 484  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||    
T  26701 acgttcacttatcgtgccacgaaccagatccatcgtggcacgattcttaactcttaggaatttttcatctttttctgagtttcgtcttttgagctcttgt 26602  T
Q  485 tcctgttttggtctgatttcaccatgat 512  Q
    |||||||| |||||||||||||||||||    
T  26601 tcctgtttcggtctgatttcaccatgat 26574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 308; Significance: 1e-173; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 87 - 512
Target Start/End: Complemental strand, 24434669 - 24434244
Alignment:
Q  87 aacatacataactccggaccaactatgagttggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaa-t 185  Q
    ||||||||||| || |||||||| |||||||||||||||||||||||||||| ||||||||| | |||||||||||||||| || |||||||||| || |    
T  24434669 aacatacataa-tcaggaccaacgatgagttggtatgagattcagggcttgtccttcggtctgcggatgtcttctatgctccaattcgtacttccaaaat 24434571  T
Q  186 cgaaccctaatccttggccgcatctcaccttatatagaaag-tttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacga 284  Q
    | |||||||||||||||||||||||| |||||||||||||| |||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  24434570 ccaaccctaatccttggccgcatctccccttatatagaaagatttttcaagttccagaaagcccatcatcgtgccacgatacggtccaatcgtggcacga 24434471  T
Q  285 tagcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtccc 384  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||| |||||||    
T  24434470 tagcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcaatttgcttcgtgccacgaaacttccagtgctgaacc-ttgtccc 24434372  T
Q  385 acgttcacttatcgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtcttttgagctcctgt 484  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  24434371 acgttcgcttatcgtgccacgaaccagatccatcgtggcacgattcttaactcttaggaatttttcatctttttctcagttttgtcttttgagctcctgt 24434272  T
Q  485 tcctgttttggtctgatttcaccatgat 512  Q
    ||||||||||||||| ||||||||||||    
T  24434271 tcctgttttggtctgctttcaccatgat 24434244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 87 - 512
Target Start/End: Complemental strand, 24444715 - 24444290
Alignment:
Q  87 aacatacataactccggaccaactatgagttggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaa-t 185  Q
    ||||||||||| || |||||||| |||||||||||||||||||||||||||| ||||||||| | |||||||||||||||| || |||||||||| || |    
T  24444715 aacatacataa-tcaggaccaacgatgagttggtatgagattcagggcttgtccttcggtctgcggatgtcttctatgctccaattcgtacttccaaaat 24444617  T
Q  186 cgaaccctaatccttggccgcatctcaccttatatagaaag-tttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacga 284  Q
    | |||||||||||||||||||||||| |||||||||||||| |||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  24444616 ccaaccctaatccttggccgcatctccccttatatagaaagatttttcaagttccagaaagcccatcatcgtgccacgatacggtccaatcgtggcacga 24444517  T
Q  285 tagcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtccc 384  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||| |||||||    
T  24444516 tagcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcaatttgcttcgtgccacgaaacttccagtgctgaacc-ttgtccc 24444418  T
Q  385 acgttcacttatcgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtcttttgagctcctgt 484  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24444417 acgttcgcttatcgtgccacgaaccagatccatcgtggcacgattcttaactcttaggaatttttcatctttttctcagtttcgtcttttgagctcctgt 24444318  T
Q  485 tcctgttttggtctgatttcaccatgat 512  Q
    || |||||||||||| ||||||||||||    
T  24444317 tcatgttttggtctgctttcaccatgat 24444290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 18 - 512
Target Start/End: Original strand, 17013444 - 17013938
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    |||||||||| ||||| || |||||||||| |||||||   |  || || |||| |||| |  ||||  ||||||||||| |||||||||||||||||||    
T  17013444 catcatggctaaatcataccaagagtttagctactcatggttttacgattataaacatacataagagtgaacatacataaatccggaccaactatgagtt 17013543  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatcgaaccctaatccttggccgcatctcacctta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||| ||||||| ||  |||||    
T  17013544 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatagtacttcccaattgatccctaatcctcggccgcaactggcctta 17013643  T
Q  218 tatagaaagtttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaaa 317  Q
    |||||||||  ||| | ||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17013644 tatagaaagaatttagggttccagaaagcccatcatcgtgccatgatacgatccaatcgtggcacgatagcttcattaatcctacgtggcagcagacaaa 17013743  T
Q  318 acctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtcccacgttcacttatcgtgccacgaaccagcttcat 417  Q
    |||||||||||||| |||||||| || ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  17013744 acctagcatcgtggtacgttgcattttgcttcgtgccacgaaatttccagtgctgaacc-ttgtcccacgttcacttatcgtgccacaaacaagcttcat 17013842  T
Q  418 cgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtct-tttgagctcctgttcctgttttggtctgatttcaccatgat 512  Q
    ||||||||||| ||| ||||||||||||| |||||||||| |||| |||||||| |||||| || |||||||||||||||||||||||||||||||    
T  17013843 cgtggcacgatgcttcactcttaggaattcttcatcttttactcagtttcgtctctttgagatcttgttcctgttttggtctgatttcaccatgat 17013938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 300; E-Value: 1e-168
Query Start/End: Original strand, 18 - 512
Target Start/End: Complemental strand, 17543757 - 17543263
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    |||||||||| ||||| || |||||||||| |||||||   |  || || |||| |||| |  ||||  ||||||||||| |||||||||||||||||||    
T  17543757 catcatggctaaatcataccaagagtttagctactcatggttttacgattataaacatacataagagtgaacatacataaatccggaccaactatgagtt 17543658  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatcgaaccctaatccttggccgcatctcacctta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||| ||||||| ||  |||||    
T  17543657 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatagtacttcccaattgatccctaatcctcggccgcaactggcctta 17543558  T
Q  218 tatagaaagtttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaaa 317  Q
    |||||||||  ||| | ||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17543557 tatagaaagaatttagggttccagaaagcccatcatcgtgccatgatacgatccaatcgtggcacgatagcttcattaatcctacgtggcagcagacaaa 17543458  T
Q  318 acctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtcccacgttcacttatcgtgccacgaaccagcttcat 417  Q
    |||||||||||||| |||||||| || ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  17543457 acctagcatcgtggtacgttgcattttgcttcgtgccacgaaatttccagtgctgaacc-ttgtcccacgttcacttatcgtgccacaaacaagcttcat 17543359  T
Q  418 cgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtct-tttgagctcctgttcctgttttggtctgatttcaccatgat 512  Q
    ||||||||||| ||| ||||||||||||| |||||||||| |||| |||||||| |||||| || |||||||||||||||||||||||||||||||    
T  17543358 cgtggcacgatgcttcactcttaggaattcttcatcttttactcagtttcgtctctttgagatcttgttcctgttttggtctgatttcaccatgat 17543263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 18 - 509
Target Start/End: Original strand, 27863969 - 27864458
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    ||||||||||||||||||||  |||||||| ||||||||||||| |||| |||||||||||| ||||  ||||||||||| | |||||||||||||||||    
T  27863969 catcatggctcaatcaaact--gagtttagctactcataactaa-caattataagcataaacaagagtgaacatacataaattcggaccaactatgagtt 27864065  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatcga-accctaatccttggccgcatctcacctt 216  Q
    |||||||||||||||||| |||||||||||| ||| ||| ||||||||||||||||| | | |  |||||  ||||||||||||||||||| ||  | ||    
T  27864066 ggtatgagattcagggctagttcttcggtctcctggtgtgttctatgctcaaaatcgcaat-caaaatcggtaccctaatccttggccgcagctggc-tt 27864163  T
Q  217 atatagaaagt-ttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagaca 315  Q
    ||||||||||  |||| | ||| ||||| ||||| |||||||||||| ||||||||||||||||||||||  | |||||||||||||||||||||| |||    
T  27864164 atatagaaagaattttagggtttcagaaagcccaccatcgtgccacgttacgatccaatcgtggcacgatgccttcattaatcctacgtggcagcacaca 27864263  T
Q  316 aaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaa-cctttgtcccacgttcacttatcgtgccacgaaccagctt 414  Q
    |||||| | ||||||||||||||||  | |||| |||||||||||||||||||| |||| | |||||||||||||| | ||||||||||||| | |  ||    
T  27864264 aaacctcgtatcgtggcacgttgcatattgctttgtgccacgaaatttccagtgctgaatcatttgtcccacgttctcgtatcgtgccacgatctacttt 27864363  T
Q  415 catcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtcttttgagctcctgttcctgttttggtctgatttcaccat 509  Q
     | |||||||| |||||| ||||||||||||||||||||||||||||| |||| ||| |||||||| ||||||| ||||||||||||||||||||    
T  27864364 aaacgtggcacaattcttcactcttaggaatttttcatctttttctcagtttcttctcttgagctcttgttcctattttggtctgatttcaccat 27864458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 18 - 512
Target Start/End: Original strand, 24903895 - 24904393
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    |||||||||||||||| || |||||||||| |||||||   |  || || |||| ||||||  ||||  ||||||||||| || ||||||||||||||||    
T  24903895 catcatggctcaatcataccaagagtttagctactcatggttttacgattataaacataaataagagtgaacatacataaatctggaccaactatgagtt 24903994  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatcgaaccctaatccttggccgcatctcacctta 217  Q
    |||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||| ||||| |||||||  ||  || ||| |||||| ||  | |||    
T  24903995 ggtatgagattcagggcttgttcttcagtctcctggtgtcttctatgctcaaaatcgcacttcacaatcgataccccattcttcgccgcaactggcttta 24904094  T
Q  218 tatagaaagtttttcgagttccagaac-gcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaa 316  Q
    ||||||||   ||| | |||||||||  ||||||||||||||||||||||||||||||||||||||||| || ||| |||||||| ||||||||||||||    
T  24904095 tatagaaaaaatttagggttccagaaaagcccatcatcgtgccacgatacgatccaatcgtggcacgattgcttcactaatcctatgtggcagcagacaa 24904194  T
Q  317 aacctagcatcgtggcacgttgca-attagcttcgtgccacgaaatttccagtg-ttgaacctttgtcccacgttcacttatcgtgccacgaaccagctt 414  Q
    ||||||||||||||||||||| || |||| |||| ||||||||||||||||| | |  |||||||||||||||||||| ||||||||||||||| ||||     
T  24904195 aacctagcatcgtggcacgttacatatta-cttcatgccacgaaatttccagcgctcaaacctttgtcccacgttcacctatcgtgccacgaacaagctc 24904293  T
Q  415 catcgtggcacgattcttaactcttaggaa-tttttcatctttttctcattttcgtct-tttgagctcctgttcctgttttggtctgatttcaccatgat 512  Q
    ||||||||||||||  || ||||||||||| |||||||||||||||||| |||| ||| ||||||||| |||||||||||||||||||||| || |||||    
T  24904294 catcgtggcacgatgattcactcttaggaattttttcatctttttctcagtttcttctctttgagctcttgttcctgttttggtctgatttaacaatgat 24904393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 18 - 285
Target Start/End: Complemental strand, 22653966 - 22653700
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    |||||||||||||||||||||||||||||| |||||||| |||| |||| |||||||||||  ||    ||||||||||| ||| |||||||||| ||||    
T  22653966 catcatggctcaatcaaactaagagtttagctactcatagctaa-caattataagcataaataaggttgaacatacataaatccagaccaactattagtt 22653868  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatc-gaaccctaatccttggccgcatctcacctt 216  Q
    ||| |||||||||||||| ||| |||||||| ||||||||||||||||||||||||| |  ||  |||| |  |||||||||| ||||||| ||  | ||    
T  22653867 ggtgtgagattcagggctagtttttcggtctcctgatgtcttctatgctcaaaatcgca-atcaaaatcggttccctaatcctcggccgcagctggcttt 22653769  T
Q  217 atatagaaag-tttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgat 285  Q
    | ||||||||  |||| | |||  |||| ||||| |||||||||||| ||||||||||||||||||||||    
T  22653768 a-atagaaagaattttagggttttagaaagcccaccatcgtgccacgttacgatccaatcgtggcacgat 22653700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 19 - 207
Target Start/End: Original strand, 31392133 - 31392321
Alignment:
Q  19 atcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagttg 118  Q
    ||||| ||||||| ||||||||||||||| |||||||  || |||||| |||||||||||   |||  ||||||||||| |||||||||||||||||||     
T  31392133 atcatagctcaatgaaactaagagtttagctactcatgtcttaacaattataagcataaatacgagtgaacatacataaatccggaccaactatgagttt 31392232  T
Q  119 gtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatcga-accctaatccttggccgca 207  Q
    ||||||||||||||||| ||||||||||||  || ||||||||||||||||||||| |  ||||||||||  ||||||||||||||||||    
T  31392233 gtatgagattcagggctagttcttcggtctcatggtgtcttctatgctcaaaatcgca-atcccaatcgatcccctaatccttggccgca 31392321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 375 - 511
Target Start/End: Complemental strand, 27234497 - 27234361
Alignment:
Q  375 cctttgtcccacgttcacttatcgtgccacgaaccagcttcatcgtggcacgattcttaactcttaggaatttttcatctttttctc-attttcgtcttt 473  Q
    |||||||||||||||||| ||||||||||| | | | ||| | ||||||||||||||| |||||||||||||||||   || ||| | |||||| |||||    
T  27234497 cctttgtcccacgttcacatatcgtgccacaagctatcttaaacgtggcacgattcttcactcttaggaatttttccatttcttcacaattttcttcttt 27234398  T
Q  474 tgagctcctgttcctgttttggtctgatttcaccatga 511  Q
    || |||| ||||||||||||| ||| ||||||||||||    
T  27234397 tgggctcttgttcctgttttgatct-atttcaccatga 27234361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 324 - 512
Target Start/End: Original strand, 31392365 - 31392555
Alignment:
Q  324 catcgtggcacgttgcaattagcttcgtgccacgaaatttccagtgttgaacctttgtcccacgttc-acttatcgtgccacgaaccagcttcatcgtgg 422  Q
    ||||||| |||||||||  | |||||||||||| |||||||||| | |||| | |||||||||||||  | ||| | ||||||||  | | ||| | |||    
T  31392365 catcgtgccacgttgcatattgcttcgtgccacaaaatttccagcgctgaaaccttgtcccacgttcttcatattgagccacgaaatatcctcaacatgg 31392464  T
Q  423 cacgattcttaactcttaggaatttttcatctttttctcattttcgtct-tttgagctcctgttcctgttttggtctgatttcaccatgat 512  Q
    |||||||| | || ||||| | ||||||||||||||||||  ||| ||| ||| || || | |||||||||||| || || ||||||||||    
T  31392465 cacgattcgtgacgcttagaactttttcatctttttctcagcttcttctctttcaggtcttattcctgttttggccttatgtcaccatgat 31392555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 5827721 - 5827673
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    |||||||| |||||| ||||||||||||  |||||||||||||||||||    
T  5827721 tcatggcttaatcaatctaagagtttagccactcataactaaacaatca 5827673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 9466823 - 9466775
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    |||||||| ||||||  ||||||||||| ||||||||||||||||||||    
T  9466823 tcatggcttaatcaatttaagagtttagctactcataactaaacaatca 9466775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 39660389 - 39660428
Alignment:
Q  29 aatcaaactaagagtttagatactcataactaaacaatca 68  Q
    |||||| |||||||||||| ||||||||||||||||||||    
T  39660389 aatcaatctaagagtttagctactcataactaaacaatca 39660428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 13331784 - 13331736
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    |||||||| |||||| | |||||||||| ||| ||||||||||||||||    
T  13331784 tcatggcttaatcaatccaagagtttagctacgcataactaaacaatca 13331736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 18 - 512
Target Start/End: Original strand, 29072 - 29568
Alignment:
Q  18 catcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    |||||||||||||||| || |||||||||| |||||||   |  || || |||| ||||||| |||| |||||||||||| |||||||||||||||||||    
T  29072 catcatggctcaatcataccaagagtttagctactcatggttttacgattataaacataaacaagagtaaacatacataaatccggaccaactatgagtt 29171  T
Q  118 ggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatcgaaccctaatccttggccgcatctcacctta 217  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||  |||||    
T  29172 ggtatgagattcagggcttgttcttcggtctcctggtgtcttctatgctcaaaatcgcacttcccaatcgatccctaatccttggccgcagctggcctta 29271  T
Q  218 tatagaaag-tttttcgagttccagaacgcccatcatcgtgccacgatacgatccaatcgtggcacgatagcatcattaatcctacgtggcagcagacaa 316  Q
    |||||||||  |||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  29272 tatagaaagaattttagggttccagaaagcccatcatcgtgccacgatacgatccaatcgtggcacgatagcttcattaatcctacgtggcagtagacaa 29371  T
Q  317 aacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtg-ttgaacctttgtcccacgttcacttatcgtgccacgaaccagcttc 415  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||    |||||||||||||||||| ||||||||||||||||| ||||||    
T  29372 aacctagcatcgtggcacgttgcattttgcttcgtgccacgaaatttccagtgcaaaaacctttgtcccacgttc-cttatcgtgccacgaacaagcttc 29470  T
Q  416 atcgtggcacgattcttaactcttaggaatttttcatctttttctcattttcgtct-tttgagctcctgttcctgttttggtctgatttcaccatgat 512  Q
    ||||||||||||| ||| ||||||||||| ||||||||||||||||| |||| |||  |||||| | ||||||| |||||||||||||| ||||||||    
T  29471 atcgtggcacgatgcttcactcttaggaacttttcatctttttctcagtttcttctcattgagcacttgttcctattttggtctgatttaaccatgat 29568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 191; Significance: 1e-103; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 87 - 512
Target Start/End: Original strand, 31546 - 31974
Alignment:
Q  87 aacatacataactccggaccaactatgagttggtatgagattcagggcttgttcttcggtcttctgatgtcttctatgctcaaaatcgtacttcccaatc 186  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||    
T  31546 aacatacataaatccggaccaactatgagttgatatgagattcagggcttgtttttcggtcttctgatgtcttctatgctcaaaatcgtccttcc-aatc 31644  T
Q  187 gaaccctaa-tccttggccgcatctcaccttatatagaaagtttttcgagttccagaacg-cccatcatcgtgccacgatacgatccaatcgtggcacga 284  Q
    || ||| || | ||| |||||| ||  | ||||||||||||  ||| | |||||||||   ||||||||||||||||||| |||||||||||||||||||    
T  31645 gatccccaaattcttcgccgcaactggctttatatagaaagaatttagggttccagaaaatcccatcatcgtgccacgatgcgatccaatcgtggcacga 31744  T
Q  285 tagcatcattaatcctacgtggcagcagacaaaacctagcatcgtggcacgttgcaattagcttcgtgccacgaaatttccagtg-ttgaacctttgtcc 383  Q
    |  |  ||||| || |||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||  | |||| ||||||    
T  31745 ttcctccattagtcttacgtggcagcagacaaaacctagcatcgtggcacgttgcatattgcttcgtgccacgaaatttccagtgcatcaacc-ttgtcc 31843  T
Q  384 cacgttcacttatcgtgccacgaaccagcttcatcgtggcacgattcttaactcttagga-atttttcatctttttctcattttcgt-cttttgagctcc 481  Q
    ||||||| | ||||||||||||| | |||| ||||||| |||||| ||| || ||| |||  |||||||||||||||||| |||| | | |||||||||     
T  31844 cacgttcccctatcgtgccacgagcaagctccatcgtgccacgatgcttcacacttgggagttttttcatctttttctcagtttcttccctttgagctct 31943  T
Q  482 tgttcctgttttggtctgatttcaccatgat 512  Q
    |||||||||||||||||||||| ||||||||    
T  31944 tgttcctgttttggtctgatttaaccatgat 31974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 13286 - 13238
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    |||||||| |||||| |||||||||||| ||||||||||||||||||||    
T  13286 tcatggcttaatcaatctaagagtttagctactcataactaaacaatca 13238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0401 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 3953 - 3856
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatcataagcataaactagagaaaacatacataactccggaccaactatgagtt 117  Q
    |||||||| ||| || |||||||||||| |||||||||||||||||||| |  |||| |  | || ||||||||||||  | | ||||||||||||||    
T  3953 tcatggcttaattaatctaagagtttagctactcataactaaacaatcaaatacatagaaaatagtaaacatacataaaccagaaccaactatgagtt 3856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 1954 - 1906
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    ||||||||  ||||| |||||||||||| ||||||||||||||||||||    
T  1954 tcatggcttcatcaatctaagagtttagctactcataactaaacaatca 1906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 20109 - 20157
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    |||||||| |||||| |||||||||||| |||||||||||||| |||||    
T  20109 tcatggcttaatcaatctaagagtttagctactcataactaaaaaatca 20157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 29016 - 28968
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    |||||||| |||||| |||||||||||| |||||||||||||| |||||    
T  29016 tcatggcttaatcaatctaagagtttagctactcataactaaataatca 28968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 52813 - 52765
Alignment:
Q  20 tcatggctcaatcaaactaagagtttagatactcataactaaacaatca 68  Q
    ||||| || |||||| |||||||||||| |||||||||||||| |||||    
T  52813 tcatgtcttaatcaatctaagagtttagctactcataactaaataatca 52765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 85 - 127
Target Start/End: Original strand, 468933 - 468975
Alignment:
Q  85 aaaacatacataactccggaccaactatgagttggtatgagat 127  Q
    ||||||||||||| || ||||||||||||||||||| ||||||    
T  468933 aaaacatacataaatcaggaccaactatgagttggtgtgagat 468975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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