View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8950_low_38 (Length: 442)
Name: NF8950_low_38
Description: NF8950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8950_low_38 |
 |  |
|
Alignment Details
Target: chr1 (Bit Score: 351; Significance: 0; HSPs: 11)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 18 - 424
Target Start/End: Complemental strand, 1857467 - 1857061
Alignment:
| Q |
18 |
ggtctttcttcccctctaagtctcaaacacttcgccgcaagaacagccacctccatgatctcttgtttgttttcttcattccacataccatcttgaataa |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
1857467 |
ggtctttcttcccctctaagtctcaaacacttcgccgcaagaacagccacctccttgatctcttgtttgttttcttcattccacaaaccatcttgaataa |
1857368 |
T |
 |
| Q |
118 |
cttcaaacacattatcgtttttcaagcaagatagaaaatgcatagcaagacttcttctctcttccggcctaccaaaacaaaaaggtttctcccccgttag |
217 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
1857367 |
cttcaaatacattatcctttttcaagcaagatagaaaatgcatagcaagacttcttctttcttccggcctaccaaaacaaaaaggtttctcccccgtcag |
1857268 |
T |
 |
| Q |
218 |
caactctacaagaactactccaaagctatagacatcacttttttcagttaattgacttgtttgcatatactctggatccaagtagccaatagttccttgc |
317 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
1857267 |
caactccacaagaactactccaaagctatagacatcacttttttcagttaattgacttgtttgcatatactctggatctaagtagccaatagttccttgc |
1857168 |
T |
 |
| Q |
318 |
accattgtggctacttcagtttgatcaagtggaatcaaccttgatgctccaaaatctgacactttggcggtgttggttccatctaagagaatgttagcac |
417 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| ||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
1857167 |
accattgtggctatttcagtttgatcaagtggaaccaatcttgaagctccaaaatccgacactttggcggtgttggttccatctaagagaatgttatcac |
1857068 |
T |
 |
| Q |
418 |
tcttgac |
424 |
Q |
| |
|
||||||| |
|
|
| T |
1857067 |
tcttgac |
1857061 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 18 - 424
Target Start/End: Original strand, 1815577 - 1815983
Alignment:
| Q |
18 |
ggtctttcttcccctctaagtctcaaacacttcgccgcaagaacagccacctccatgatctcttgtttgttttcttcattccacataccatcttgaataa |
117 |
Q |
| |
|
|||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
1815577 |
ggtctttcctcccctataagtctcaaacagttcgccgcaagaacagccacctccatgatcacttgtttgttttcttcattccacaaaccatcttgaataa |
1815676 |
T |
 |
| Q |
118 |
cttcaaacacattatcgtttttcaagcaagatagaaaatgcatagcaagacttcttctctcttccggcctaccaaaacaaaaaggtttctcccccgttag |
217 |
Q |
| |
|
|||||||||||||||| |||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1815677 |
cttcaaacacattatcctttttcaagcaagataaaaagtgcgtagcaagacttcttctctcttccggcctaccaaaacaaaaaggtttctcccccgttag |
1815776 |
T |
 |
| Q |
218 |
caactctacaagaactactccaaagctatagacatcacttttttcagttaattgacttgtttgcatatactctggatccaagtagccaatagttccttgc |
317 |
Q |
| |
|
|| ||| ||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1815777 |
cagctccacaagaactactccaaagctatatacatcacttttctcagttaattggcttgtttgcatatactctggatccaagtagccaatagttccttgc |
1815876 |
T |
 |
| Q |
318 |
accattgtggctacttcagtttgatcaagtggaatcaaccttgatgctccaaaatctgacactttggcggtgttggttccatctaagagaatgttagcac |
417 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
1815877 |
accattgtggctacttcagtttgatcaagtggaatcaaccttgatgctccaaaatctgacactttagcggtgttggttccatctaagagaatgttagcac |
1815976 |
T |
 |
| Q |
418 |
tcttgac |
424 |
Q |
| |
|
||||||| |
|
|
| T |
1815977 |
tcttgac |
1815983 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 18 - 424
Target Start/End: Complemental strand, 1843456 - 1843050
Alignment:
| Q |
18 |
ggtctttcttcccctctaagtctcaaacacttcgccgcaagaacagccacctccatgatctcttgtttgttttcttcattccacataccatcttgaataa |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
1843456 |
ggtctttcttcccctctaagtctcaaacacttcgccgcaagaacagccacctccttgatctcttgtttgttttcttcattccacaaaccatcttgaataa |
1843357 |
T |
 |
| Q |
118 |
cttcaaacacattatcgtttttcaagcaagatagaaaatgcatagcaagacttcttctctcttccggcctaccaaaacaaaaaggtttctcccccgttag |
217 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1843356 |
cttcaaacacattatcttttttcaatcaagatagtaaattcattgcaagacttcttctctcttccggcctaccaaaacaaaaaggtttctcccccgttag |
1843257 |
T |
 |
| Q |
218 |
caactctacaagaactactccaaagctatagacatcacttttttcagttaattgacttgtttgcatatactctggatccaagtagccaatagttccttgc |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
1843256 |
caactctacaagaactactccaaagctatagacatcacttttttcagttaattgacttgtttgcatatactctggatctaagtagccaatagttccttgc |
1843157 |
T |
 |
| Q |
318 |
accattgtggctacttcagtttgatcaagtggaatcaaccttgatgctccaaaatctgacactttggcggtgttggttccatctaagagaatgttagcac |
417 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||| ||| ||||| |||||||||||||| |||||||| |||||||||| |||||||||||||||| ||| |
|
|
| T |
1843156 |
accattgtggctatttcagtttgatcaattggaaccaatcttgaagctccaaaatctgatactttggctgtgttggttctatctaagagaatgttatcac |
1843057 |
T |
 |
| Q |
418 |
tcttgac |
424 |
Q |
| |
|
||||||| |
|
|
| T |
1843056 |
tcttgac |
1843050 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 18 - 424
Target Start/End: Complemental strand, 1869065 - 1868659
Alignment:
| Q |
18 |
ggtctttcttcccctctaagtctcaaacacttcgccgcaagaacagccacctccatgatctcttgtttgttttcttcattccacataccatcttgaataa |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
1869065 |
ggtctttcttcccctctaagtctcaaacacttcgccgcaagaacagccacctccttgatctcttgtttgttttcttcattccacaaaccatcttgaataa |
1868966 |
T |
 |
| Q |
118 |
cttcaaacacattatcgtttttcaagcaagatagaaaatgcatagcaagacttcttctctcttccggcctaccaaaacaaaaaggtttctcccccgttag |
217 |
Q |
| |
|
||||||| |||||||| |||||||| |||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
1868965 |
cttcaaatacattatcttttttcaatcaagatagtaaatgcattgcaagacttcttctttcttccggcctaccaaaacaaaaaggtttctcccccgtcag |
1868866 |
T |
 |
| Q |
218 |
caactctacaagaactactccaaagctatagacatcacttttttcagttaattgacttgtttgcatatactctggatccaagtagccaatagttccttgc |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
1868865 |
caactctacaagaactactccaaagctatagacatcacttttttcagttaattgacttgtttgcatatactctggatctaagtagccaatagttccttgc |
1868766 |
T |
 |
| Q |
318 |
accattgtggctacttcagtttgatcaagtggaatcaaccttgatgctccaaaatctgacactttggcggtgttggttccatctaagagaatgttagcac |
417 |
Q |
| |
|
||||||||||||| |||||||||||||||||||| ||| ||||| ||||||||||| || ||||||||||||||||||| |||||||||||||||| ||| |
|
|
| T |
1868765 |
accattgtggctatttcagtttgatcaagtggaaccaatcttgaagctccaaaatccgatactttggcggtgttggttctatctaagagaatgttatcac |
1868666 |
T |
 |
| Q |
418 |
tcttgac |
424 |
Q |
| |
|
||||||| |
|
|
| T |
1868665 |
tcttgac |
1868659 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 21 - 382
Target Start/End: Original strand, 9161402 - 9161763
Alignment:
| Q |
21 |
ctttcttcccctctaagtctcaaacacttcgccgcaagaacagccacctccatgatctcttgtttgttttcttcattccacataccatcttgaataactt |
120 |
Q |
| |
|
||||| |||||||| |||||||||||| | || ||||||| ||| |||||| | ||||| | |||||||| ||||| | |||||| |||||||| ||| |
|
|
| T |
9161402 |
ctttcatcccctcttagtctcaaacaccttgctgcaagaatagcaacctccttaatctcctccttgttttcatcatttaaaataccaacttgaatagctt |
9161501 |
T |
 |
| Q |
121 |
caaacacattatcgtttttcaagcaagatagaaaatgcatagcaagacttcttctctcttccggcctaccaaaacaaaaaggtttctcccccgttagcaa |
220 |
Q |
| |
|
|||| | |||| | ||| || ||||| | ||| |||||||||||||| | ||||||| |||||| |||| ||| |||||| || ||||| || | |
|
|
| T |
9161502 |
caaaaattctatcttgttttaaacaagacaaaaagtgcatagcaagactgatattctcttctggcctattaaaagaaagaggtttgtctcccgtaagaag |
9161601 |
T |
 |
| Q |
221 |
ctctacaagaactactccaaagctatagacatcacttttttcagttaattgacttgtttgcatatactctggatccaagtagccaatagttccttgcacc |
320 |
Q |
| |
|
|||| |||||||||| ||||||||||| ||||||||||| || |||| |||| ||||||||||||||| ||||| ||||| |||| ||||||||| ||| |
|
|
| T |
9161602 |
ctctgcaagaactacaccaaagctataaacatcacttttctctgttagttgatgtgtttgcatatactccggatctaagtaaccaagagttccttgtacc |
9161701 |
T |
 |
| Q |
321 |
attgtggctacttcagtttgatcaagtggaatcaaccttgatgctccaaaatctgacacttt |
382 |
Q |
| |
|
||||| |||| || |||||||||||||||| |||||| || ||||||||||| || ||||| |
|
|
| T |
9161702 |
attgttgctatctcggtttgatcaagtggaaccaacctcgaagctccaaaatcagaaacttt |
9161763 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 17 - 390
Target Start/End: Original strand, 9170224 - 9170597
Alignment:
| Q |
17 |
aggtctttcttcccctctaagtctcaaacacttcgccgcaagaacagccacctccatgatctcttgtttgttttcttcattccacata-ccatcttgaat |
115 |
Q |
| |
|
||||||||| |||||||||||||| |||||| | | ||||||| ||| |||||| | ||||||| ||||| || || ||| ||| | ||| ||||||| |
|
|
| T |
9170224 |
aggtctttcatcccctctaagtcttaaacaccttgaagcaagaatagcaacctccttaatctctttcttgttatcatcgttc-acaaatccaacttgaat |
9170322 |
T |
 |
| Q |
116 |
aacttcaaacacattatcgtttttcaagcaagatagaaaatgcatagcaagacttcttctctcttccggcctaccaaaacaaaaaggtttctcccccgtt |
215 |
Q |
| |
|
| ||||||| | ||||| | ||| || ||||| | ||| |||||||||||||| | ||||||| |||||| |||| ||| |||||| || || ||| |
|
|
| T |
9170323 |
agcttcaaaaaatttatcttgttttaaacaagacaaaaagtgcatagcaagactaatggtctcttctggcctattaaaagaaagaggtttgtcacctgtt |
9170422 |
T |
 |
| Q |
216 |
agcaactctacaagaactactccaaagctatagacatcacttttttcagttaattgacttgtttgcatatactctggatccaagtagccaatagttcctt |
315 |
Q |
| |
|
|| | |||| |||||||||||||||||||||| |||||||||||||| ||||||| | ||||||||||||||| ||||| ||||| |||| ||||||| |
|
|
| T |
9170423 |
agaagctctgcaagaactactccaaagctataaacatcacttttttcggttaatttatgtgtttgcatatactcgggatctaagtatccaagtgttcctt |
9170522 |
T |
 |
| Q |
316 |
gcaccattgtggctacttcagtttgatcaagtggaatcaaccttgatgctccaaaatctgacactttggcggtgt |
390 |
Q |
| |
|
|||||||||| |||| || |||||||||||||||| ||| ||||| ||||| || || || |||||||| |||| |
|
|
| T |
9170523 |
gcaccattgttgctatctctgtttgatcaagtggaaccaatcttgaagctccgaagtcggaaactttggcagtgt |
9170597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 17 - 367
Target Start/End: Original strand, 9218307 - 9218657
Alignment:
| Q |
17 |
aggtctttcttcccctctaagtctcaaacacttcgccgcaagaacagccacctccatgatctcttgtttgttttcttcattccacataccatcttgaata |
116 |
Q |
| |
|
||||||||| || ||||||||||| |||||| | || ||||||| || |||||| | ||||||| |||||||| ||||| | || ||| |||||||| |
|
|
| T |
9218307 |
aggtctttcatcacctctaagtcttaaacaccttgcagcaagaatagaaacctccttaatctctttcttgttttcatcattgaaaattccaacttgaata |
9218406 |
T |
 |
| Q |
117 |
acttcaaacacattatcgtttttcaagcaagatagaaaatgcatagcaagacttcttctctcttccggcctaccaaaacaaaaaggtttctcccccgtta |
216 |
Q |
| |
|
| ||||| | ||||| | ||| || ||||| | ||| |||||||||||||| | ||||||| ||||| |||| ||| |||||| | || |||| |
|
|
| T |
9218407 |
gcatcaaaaagtttatcttgttttaaacaagacaaaaagtgcatagcaagactaatggtctcttctggcctgttaaaagaaagaggtttggcacctgtta |
9218506 |
T |
 |
| Q |
217 |
gcaactctacaagaactactccaaagctatagacatcacttttttcagttaattgacttgtttgcatatactctggatccaagtagccaatagttccttg |
316 |
Q |
| |
|
| | |||| |||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||| ||||| |||| ||||||||| |
|
|
| T |
9218507 |
gaagctctgcaagaactactccaaagctatacacatcacttttttcggttaattgatgtgtttgcatatactctggatctaagtatccaagagttccttg |
9218606 |
T |
 |
| Q |
317 |
caccattgtggctacttcagtttgatcaagtggaatcaaccttgatgctcc |
367 |
Q |
| |
|
|||||||| |||| || |||||||||||||||| ||| ||||| ||||| |
|
|
| T |
9218607 |
taccattgtcgctatctcggtttgatcaagtggaaccaatcttgaagctcc |
9218657 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 17 - 390
Target Start/End: Original strand, 9199791 - 9200164
Alignment:
| Q |
17 |
aggtctttcttcccctctaagtctcaaacacttcgccgcaagaacagccacctccatgatctcttgtttgttttcttcattccacataccatcttgaata |
116 |
Q |
| |
|
||||||||| || ||||||||||| |||||| | || ||||||| ||| |||||| | ||||||| |||||||| |||| | | || ||| |||||||| |
|
|
| T |
9199791 |
aggtctttcatcacctctaagtcttaaacaccttgcagcaagaatagcaacctccttaatctctttcttgttttcatcatccaaaattccaacttgaata |
9199890 |
T |
 |
| Q |
117 |
acttcaaacacattatcgtttttcaagcaagatagaaaatgcatagcaagacttcttctctcttccggcctaccaaaacaaaaaggtttctcccccgtta |
216 |
Q |
| |
|
| ||||| | ||||| | ||| || ||||| | ||| |||||||||||||| | | ||||| |||| |||| ||| |||||| || || |||| |
|
|
| T |
9199891 |
gcatcaaaaagtttatcttgttttaaacaagacaaaaagtgcatagcaagactaatggtttcttcttgcctgttaaaagaaagaggtttgtcacctgtta |
9199990 |
T |
 |
| Q |
217 |
gcaactctacaagaactactccaaagctatagacatcacttttttcagttaattgacttgtttgcatatactctggatccaagtagccaatagttccttg |
316 |
Q |
| |
|
| | |||| ||||||| |||||||||||||| ||||||||||| || |||| |||| ||||||||||||||| ||||| ||||| |||| |||||||| |
|
|
| T |
9199991 |
gaagctctgcaagaaccactccaaagctataaacatcacttttctcggttagttgatgtgtttgcatatactcgggatctaagtatccaagtgttccttg |
9200090 |
T |
 |
| Q |
317 |
caccattgtggctacttcagtttgatcaagtggaatcaaccttgatgctccaaaatctgacactttggcggtgt |
390 |
Q |
| |
|
||||||||| |||| || |||||||||||||||| ||| || || |||||||| || || ||||| ||||||| |
|
|
| T |
9200091 |
caccattgttgctatctctgtttgatcaagtggaaccaatctggaagctccaaagtcagaaacttttgcggtgt |
9200164 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 351
Target Start/End: Complemental strand, 9119054 - 9118720
Alignment:
| Q |
17 |
aggtctttcttcccctctaagtctcaaacacttcgccgcaagaacagccacctccatgatctcttgtttgttttcttcattccacataccatcttgaata |
116 |
Q |
| |
|
||||||||| || |||| ||||||||||||| | || ||||||| ||| |||||| | ||||||| ||||| || |||||| | || ||| |||||||| |
|
|
| T |
9119054 |
aggtctttcctctcctcgaagtctcaaacaccttgctgcaagaatagcaacctccttaatctcttccttgttatcatcattcaaaattccaacttgaata |
9118955 |
T |
 |
| Q |
117 |
acttcaaacacattatcgtttttcaagcaagatagaaaatgcatagcaagacttcttctctcttccggcctaccaaaacaaaaaggtttctcccccgtta |
216 |
Q |
| |
|
||||||| | ||||| | ||| || ||||| | || |||||||||||||| | ||||||| ||||| |||| || |||||| || || |||| |
|
|
| T |
9118954 |
gcttcaaaaagtttatcttgttttaaacaagacaagaagtgcatagcaagactaatggtctcttctggcctgttaaaatcaagaggtttgtcacctgtta |
9118855 |
T |
 |
| Q |
217 |
gcaactctacaagaactactccaaagctatagacatcacttttttcagttaattgacttgtttgcatatactctggatccaagtagccaatagttccttg |
316 |
Q |
| |
|
| | |||| |||||||||||||||||||||| ||||||||||| || ||||||||| |||||||| |||||||| || ||||| |||| |||||||| |
|
|
| T |
9118854 |
gaagctctgcaagaactactccaaagctataaacatcacttttctcggttaattgatgcgtttgcatgtactctgggtctaagtatccaagtgttccttg |
9118755 |
T |
 |
| Q |
317 |
caccattgtggctacttcagtttgatcaagtggaa |
351 |
Q |
| |
|
|||| ||| |||| || |||||||||||||||| |
|
|
| T |
9118754 |
taccactgttgctatctcggtttgatcaagtggaa |
9118720 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 84 - 382
Target Start/End: Original strand, 9155553 - 9155851
Alignment:
| Q |
84 |
ttgttttcttcattccacataccatcttgaataacttcaaacacattatcgtttttcaagcaagatagaaaatgcatagcaagacttcttctctcttccg |
183 |
Q |
| |
|
|||||||| ||||| | |||||| |||||||| ||||||| | |||| | ||| || ||||| | ||| ||||| |||||||| | |||||||| | |
|
|
| T |
9155553 |
ttgttttcatcatttaagataccaacttgaatagcttcaaaaattctatcttgttttaaacaagacaaaaagtgcattgcaagactaatactctcttctg |
9155652 |
T |
 |
| Q |
184 |
gcctaccaaaacaaaaaggtttctcccccgttagcaactctacaagaactactccaaagctatagacatcacttttttcagttaattgacttgtttgcat |
283 |
Q |
| |
|
||||| |||| | | |||||| || || || || | ||| |||| ||||||||||||||||||||||||||||| || ||||||||| |||||||| |
|
|
| T |
9155653 |
gcctattaaaagatagaggtttatctcctgtcagaagctccgcaagcactactccaaagctatagacatcacttttctcggttaattgatgagtttgcat |
9155752 |
T |
 |
| Q |
284 |
atactctggatccaagtagccaatagttccttgcaccattgtggctacttcagtttgatcaagtggaatcaaccttgatgctccaaaatctgacacttt |
382 |
Q |
| |
|
|||||||||||| | ||| |||| ||||||||| |||||||| |||| || |||||||||||||||| ||||| || ||||||||||| || ||||| |
|
|
| T |
9155753 |
atactctggatctaggtatccaagagttccttgaaccattgttgctatctcggtttgatcaagtggaactaacctcgaagctccaaaatcggaaacttt |
9155851 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 424
Target Start/End: Original strand, 9229192 - 9229599
Alignment:
| Q |
17 |
aggtctttcttcccctctaagtctcaaacacttcgccgcaagaacagccacctccatgatctcttgtttgttttcttcattccacataccatcttgaata |
116 |
Q |
| |
|
||||||||| || ||| |||||||||| ||| | || ||||||| ||| || ||| | ||||| | ||||| || |||||| | |||||| |||||| | |
|
|
| T |
9229192 |
aggtctttcctcgcctttaagtctcaagcaccttgcagcaagaatagcaacttccttaatctcctccttgttctcatcattcaaaataccaacttgaaga |
9229291 |
T |
 |
| Q |
117 |
acttcaaacacattatcgtttttcaagcaagatagaaaatgcatagcaagacttcttctctcttccggcctaccaaaacaaaaaggtttctcccccgtta |
216 |
Q |
| |
|
|||||| |||||| || | | | || ||||||| || || || ||||| ||||| | ||||| || ||| |||| ||| ||||||||||||||||| |
|
|
| T |
9229292 |
acttcagacacatgattctctcttaaacaagataagaagtgaattgcaaggcttctgttttcttctggtctattaaaagaaataggtttctcccccgtta |
9229391 |
T |
 |
| Q |
217 |
gcaactctacaagaactactccaaagctatagacatcacttttttcagttaattgacttgtttgcatatactctggatccaagtagccaatagttccttg |
316 |
Q |
| |
|
| | |||| | || ||||| || |||||||| ||||||||||| || |||| ||| |||||||||||| |||||||| || ||||||| ||||||||| |
|
|
| T |
9229392 |
ggagctctgccagtactaccccgaagctataaacatcacttttctctgttagttggtgtgtttgcatatattctggatctaaatagccaagagttccttg |
9229491 |
T |
 |
| Q |
317 |
caccattgtggctacttcagtttgatcaagtggaatcaaccttgatgctccaaaatctgacactttggcggtgttggttccatctaagagaatgttagca |
416 |
Q |
| |
|
|||| ||||||| ||| ||||||||||||| ||| ||||| || |||||||| |||||||| || |||| | |||| ||||||||||| ||| |
|
|
| T |
9229492 |
taccacagtggctatcatagtatgatcaagtggaaccaatcttgaagcaccaaaatcagacacttttgcagtgtaattgtcatccaagagaatgttggca |
9229591 |
T |
 |
| Q |
417 |
ctcttgac |
424 |
Q |
| |
|
|| ||||| |
|
|
| T |
9229592 |
cttttgac |
9229599 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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