View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8950_low_65 (Length: 318)
Name: NF8950_low_65
Description: NF8950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8950_low_65 |
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Alignment Details
Target: chr4 (Bit Score: 253; Significance: 1e-141; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 40710773 - 40710510
Alignment:
| Q |
1 |
tgcaacaagcaacaataacagcagtgactgagtatagtatagtcatttgcaacatgaaaaaccattaaccatgattcaactattcatttactcttcaacc |
100 |
Q |
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| T |
40710773 |
tgcaacaagcaacaataacagcagtgactcagtatagtatagtcatttgcaacatgaaaaaccattaaccatgattcaactattcatttactcttcaacc |
40710674 |
T |
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| Q |
101 |
ctttttctttttctatgtatacaccaaaccctttaatcatttcacaatcataatcacttttatgggttgctttcactccaaaactgctcatcttcactcc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
40710673 |
ctttttctttttctatgtatacaccaaaccctttaatcatttcacaatcataatcac-tttatgggttgctttcactccaaaactgctcatcttcactcc |
40710575 |
T |
|
| Q |
201 |
cctgaagaccctcctactgctttacctgactcaaagaaaaccgatccaggtaactactaactacc |
265 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40710574 |
cctgaagaccctcctactgctttacctgactcaaagaaaaccgatccaggtaactactaactacc |
40710510 |
T |
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