View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8950_low_80 (Length: 283)

Name: NF8950_low_80
Description: NF8950
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8950_low_80
NF8950_low_80
[»] chr6 (29 HSPs)
chr6 (1-266)||(28075794-28076062)
chr6 (1-168)||(27788618-27788783)
chr6 (1-180)||(20711635-20711815)
chr6 (1-164)||(13727331-13727494)
chr6 (1-168)||(17353965-17354132)
chr6 (1-164)||(21479505-21479669)
chr6 (1-164)||(21280556-21280719)
chr6 (1-164)||(33774128-33774292)
chr6 (1-168)||(235153-235321)
chr6 (180-265)||(28036309-28036394)
chr6 (1-178)||(19737611-19737787)
chr6 (1-168)||(1155775-1155944)
chr6 (16-162)||(27314113-27314259)
chr6 (1-164)||(30832457-30832619)
chr6 (181-265)||(28018639-28018723)
chr6 (1-88)||(24711007-24711094)
chr6 (176-265)||(27922120-27922209)
chr6 (1-97)||(34397868-34397964)
chr6 (1-90)||(2477590-2477679)
chr6 (1-89)||(20611801-20611889)
chr6 (182-265)||(28003936-28004019)
chr6 (5-90)||(6159453-6159538)
chr6 (1-85)||(21183686-21183770)
chr6 (11-90)||(30121783-30121862)
chr6 (5-73)||(4036963-4037031)
chr6 (54-168)||(19987215-19987326)
chr6 (182-265)||(28047505-28047588)
chr6 (108-164)||(24710928-24710984)
chr6 (108-179)||(20611905-20611977)
[»] chr5 (43 HSPs)
chr5 (1-168)||(16198719-16198886)
chr5 (1-168)||(9364299-9364466)
chr5 (1-180)||(38869276-38869455)
chr5 (1-164)||(34756295-34756458)
chr5 (1-167)||(27924090-27924256)
chr5 (1-180)||(27079019-27079200)
chr5 (1-166)||(7670932-7671106)
chr5 (1-168)||(28822262-28822434)
chr5 (1-164)||(36187809-36187971)
chr5 (3-164)||(2274900-2275061)
chr5 (1-168)||(16799250-16799419)
chr5 (1-162)||(30854337-30854498)
chr5 (1-162)||(31194544-31194703)
chr5 (1-164)||(19523207-19523370)
chr5 (1-164)||(22986487-22986650)
chr5 (5-180)||(16591987-16592162)
chr5 (1-164)||(15480020-15480181)
chr5 (6-94)||(40389535-40389623)
chr5 (15-164)||(7338021-7338170)
chr5 (1-134)||(23284022-23284154)
chr5 (1-162)||(31881364-31881525)
chr5 (2-89)||(10543682-10543769)
chr5 (1-90)||(2024645-2024734)
chr5 (1-90)||(14318388-14318477)
chr5 (1-90)||(36868879-36868968)
chr5 (1-89)||(26718953-26719041)
chr5 (1-89)||(26988697-26988785)
chr5 (1-90)||(34425911-34426000)
chr5 (1-89)||(2530901-2530989)
chr5 (5-89)||(24395751-24395835)
chr5 (5-90)||(1366529-1366614)
chr5 (1-90)||(2412096-2412185)
chr5 (1-90)||(40794330-40794419)
chr5 (113-168)||(40389463-40389518)
chr5 (1-90)||(11242321-11242410)
chr5 (5-90)||(22648739-22648824)
chr5 (1-90)||(33037788-33037877)
chr5 (2-74)||(15639652-15639724)
chr5 (1-90)||(10407469-10407558)
chr5 (50-90)||(606211-606251)
chr5 (107-142)||(23283979-23284014)
chr5 (5-74)||(41911636-41911705)
chr5 (6-90)||(17344969-17345053)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-168)||(106546-106713)
[»] chr7 (35 HSPs)
chr7 (1-169)||(10329336-10329504)
chr7 (1-168)||(20091207-20091375)
chr7 (1-179)||(23550986-23551165)
chr7 (1-164)||(8171471-8171633)
chr7 (1-177)||(24525599-24525779)
chr7 (1-164)||(29077228-29077390)
chr7 (1-164)||(18776697-18776860)
chr7 (1-168)||(19692102-19692269)
chr7 (1-168)||(47984895-47985064)
chr7 (1-168)||(48983766-48983938)
chr7 (15-164)||(26254015-26254164)
chr7 (1-177)||(38414793-38414970)
chr7 (1-164)||(12596221-12596381)
chr7 (5-168)||(8239699-8239861)
chr7 (1-97)||(10955492-10955588)
chr7 (1-168)||(25010441-25010601)
chr7 (1-162)||(28749718-28749879)
chr7 (16-169)||(33162265-33162418)
chr7 (1-89)||(23859081-23859169)
chr7 (1-83)||(9021812-9021894)
chr7 (1-90)||(7398459-7398548)
chr7 (1-89)||(36891586-36891674)
chr7 (1-90)||(2611267-2611356)
chr7 (5-90)||(6765686-6765771)
chr7 (5-90)||(23744808-23744893)
chr7 (1-89)||(20153209-20153297)
chr7 (1-81)||(23020498-23020577)
chr7 (10-87)||(21763595-21763672)
chr7 (1-90)||(27237428-27237517)
chr7 (5-89)||(12981338-12981422)
chr7 (1-90)||(36902929-36903018)
chr7 (107-164)||(40357311-40357368)
chr7 (12-90)||(12419500-12419578)
chr7 (7-73)||(38971267-38971333)
chr7 (17-90)||(18201161-18201234)
[»] chr4 (52 HSPs)
chr4 (1-168)||(37777150-37777317)
chr4 (2-168)||(32128598-32128764)
chr4 (1-168)||(34027592-34027758)
chr4 (1-167)||(43455460-43455625)
chr4 (1-164)||(54780790-54780954)
chr4 (1-164)||(38209522-38209685)
chr4 (1-167)||(2790670-2790835)
chr4 (1-177)||(34768492-34768668)
chr4 (1-168)||(54083170-54083336)
chr4 (1-164)||(47129000-47129162)
chr4 (6-168)||(16882323-16882484)
chr4 (1-164)||(32915398-32915561)
chr4 (1-167)||(19498517-19498680)
chr4 (1-177)||(40089529-40089714)
chr4 (1-164)||(5128772-5128936)
chr4 (1-168)||(16845034-16845200)
chr4 (1-164)||(37514672-37514834)
chr4 (20-164)||(17679432-17679575)
chr4 (1-156)||(1105545-1105699)
chr4 (1-148)||(10978913-10979062)
chr4 (19-164)||(10428130-10428273)
chr4 (1-164)||(48209253-48209422)
chr4 (1-164)||(35779259-35779419)
chr4 (16-162)||(51964736-51964884)
chr4 (15-164)||(16922259-16922409)
chr4 (1-168)||(38352193-38352349)
chr4 (1-164)||(35465120-35465281)
chr4 (1-76)||(4167910-4167985)
chr4 (47-164)||(55255316-55255433)
chr4 (2-87)||(13460221-13460306)
chr4 (1-90)||(36118463-36118552)
chr4 (1-90)||(36178685-36178774)
chr4 (1-90)||(52468299-52468388)
chr4 (1-82)||(24396947-24397028)
chr4 (1-90)||(27112043-27112132)
chr4 (4-88)||(37744916-37745001)
chr4 (42-162)||(23508443-23508564)
chr4 (1-97)||(24969450-24969536)
chr4 (3-97)||(51691913-51692009)
chr4 (3-90)||(10042005-10042092)
chr4 (5-95)||(2135321-2135411)
chr4 (17-83)||(40217261-40217327)
chr4 (17-90)||(39655259-39655332)
chr4 (2-90)||(36362876-36362964)
chr4 (3-90)||(39329397-39329484)
chr4 (108-168)||(24969716-24969776)
chr4 (51-97)||(9578662-9578708)
chr4 (1-90)||(45656188-45656277)
chr4 (40-82)||(29425187-29425229)
chr4 (57-90)||(24614022-24614055)
chr4 (57-90)||(30507127-30507160)
chr4 (1-33)||(55255282-55255314)
[»] chr3 (37 HSPs)
chr3 (1-168)||(37168378-37168545)
chr3 (1-168)||(44708488-44708654)
chr3 (5-166)||(34290566-34290727)
chr3 (1-177)||(53506802-53506979)
chr3 (1-168)||(43207167-43207332)
chr3 (1-168)||(50939162-50939328)
chr3 (1-164)||(47467695-47467858)
chr3 (2-168)||(54407083-54407252)
chr3 (1-164)||(38681025-38681188)
chr3 (1-164)||(54619135-54619298)
chr3 (1-164)||(21582782-21582946)
chr3 (1-164)||(8073271-8073433)
chr3 (1-164)||(27078500-27078664)
chr3 (1-164)||(27084297-27084461)
chr3 (4-164)||(36715956-36716117)
chr3 (1-164)||(3953829-3953991)
chr3 (1-164)||(42098812-42098975)
chr3 (1-164)||(53149246-53149409)
chr3 (2-97)||(9878686-9878781)
chr3 (1-164)||(18372490-18372656)
chr3 (1-162)||(36605976-36606136)
chr3 (12-169)||(50258551-50258708)
chr3 (1-89)||(28689368-28689456)
chr3 (1-168)||(48157150-48157306)
chr3 (11-90)||(26279563-26279642)
chr3 (5-89)||(8420341-8420425)
chr3 (12-89)||(32319162-32319239)
chr3 (107-168)||(48720439-48720500)
chr3 (1-90)||(49393101-49393189)
chr3 (1-90)||(54574833-54574922)
chr3 (21-90)||(42453435-42453504)
chr3 (3-90)||(25855435-25855521)
chr3 (116-164)||(29620378-29620426)
chr3 (1-61)||(29620423-29620483)
chr3 (40-85)||(23641329-23641374)
chr3 (1-90)||(52374667-52374756)
chr3 (1-90)||(789947-790036)
[»] chr8 (34 HSPs)
chr8 (1-168)||(23606558-23606724)
chr8 (1-166)||(10917399-10917563)
chr8 (1-168)||(23798189-23798356)
chr8 (1-168)||(42600790-42600957)
chr8 (1-164)||(45475825-45475987)
chr8 (1-162)||(13534622-13534781)
chr8 (1-162)||(13624162-13624321)
chr8 (1-164)||(37430090-37430253)
chr8 (1-156)||(30883337-30883493)
chr8 (1-164)||(2952151-2952316)
chr8 (3-164)||(3048449-3048610)
chr8 (1-164)||(5860674-5860839)
chr8 (1-164)||(41879189-41879350)
chr8 (1-90)||(15167421-15167510)
chr8 (1-89)||(15078766-15078854)
chr8 (1-90)||(7944528-7944617)
chr8 (17-90)||(30674409-30674482)
chr8 (4-88)||(5721570-5721654)
chr8 (1-89)||(8102920-8103008)
chr8 (1-169)||(41677100-41677269)
chr8 (1-90)||(11290192-11290281)
chr8 (107-164)||(20003742-20003799)
chr8 (2-90)||(8646215-8646302)
chr8 (1-74)||(5942704-5942777)
chr8 (1-90)||(39332411-39332500)
chr8 (1-89)||(25561502-25561588)
chr8 (3-90)||(5973113-5973200)
chr8 (1-90)||(14509989-14510077)
chr8 (1-88)||(34789870-34789957)
chr8 (17-90)||(23941097-23941170)
chr8 (1-90)||(34048711-34048802)
chr8 (51-90)||(9108551-9108590)
chr8 (50-89)||(34868184-34868223)
chr8 (45-90)||(38009158-38009203)
[»] chr2 (34 HSPs)
chr2 (1-168)||(24410444-24410613)
chr2 (1-168)||(27506669-27506835)
chr2 (1-164)||(4505901-4506064)
chr2 (1-168)||(10762495-10762660)
chr2 (1-168)||(26716135-26716303)
chr2 (1-164)||(6965014-6965175)
chr2 (1-154)||(9046036-9046189)
chr2 (1-164)||(29939795-29939957)
chr2 (1-169)||(8907005-8907174)
chr2 (1-164)||(3155224-3155387)
chr2 (1-164)||(12337379-12337543)
chr2 (20-164)||(40636164-40636307)
chr2 (1-177)||(3953013-3953188)
chr2 (10-164)||(34693991-34694144)
chr2 (10-164)||(34716403-34716556)
chr2 (5-155)||(7162795-7162944)
chr2 (1-90)||(24035551-24035640)
chr2 (11-90)||(13800550-13800630)
chr2 (20-164)||(5952650-5952791)
chr2 (1-90)||(16097015-16097104)
chr2 (1-90)||(38400805-38400894)
chr2 (2-90)||(12134046-12134134)
chr2 (50-168)||(8327674-8327791)
chr2 (1-90)||(21665706-21665795)
chr2 (65-164)||(1396631-1396730)
chr2 (5-90)||(28425716-28425801)
chr2 (2-90)||(11912763-11912851)
chr2 (2-90)||(16227374-16227462)
chr2 (1-90)||(7742139-7742229)
chr2 (1-63)||(37182677-37182739)
chr2 (17-90)||(42029168-42029241)
chr2 (18-89)||(10252437-10252511)
chr2 (1-68)||(22727530-22727597)
chr2 (57-90)||(22727463-22727496)
[»] chr1 (43 HSPs)
chr1 (1-168)||(17168975-17169141)
chr1 (1-168)||(9172950-9173117)
chr1 (1-168)||(9180932-9181099)
chr1 (5-168)||(19955740-19955902)
chr1 (1-168)||(40501717-40501884)
chr1 (1-169)||(23185446-23185613)
chr1 (1-164)||(14146319-14146481)
chr1 (1-168)||(51607368-51607534)
chr1 (1-164)||(5316699-5316861)
chr1 (3-163)||(1366812-1366970)
chr1 (5-164)||(5027572-5027732)
chr1 (3-164)||(6771812-6771975)
chr1 (3-164)||(21740866-21741029)
chr1 (1-97)||(27559656-27559752)
chr1 (1-164)||(44655760-44655922)
chr1 (1-164)||(16140074-16140236)
chr1 (1-168)||(13913408-13913576)
chr1 (1-164)||(3406437-3406600)
chr1 (1-164)||(3440220-3440383)
chr1 (1-156)||(4971558-4971712)
chr1 (1-164)||(50881449-50881610)
chr1 (17-164)||(22865392-22865538)
chr1 (1-153)||(41697080-41697231)
chr1 (5-162)||(6889634-6889789)
chr1 (5-162)||(6891480-6891635)
chr1 (47-164)||(27906660-27906777)
chr1 (1-185)||(44895671-44895851)
chr1 (1-90)||(38547041-38547130)
chr1 (1-90)||(39134727-39134817)
chr1 (1-90)||(45758513-45758602)
chr1 (1-82)||(26803967-26804045)
chr1 (1-87)||(38853541-38853627)
chr1 (1-97)||(33170778-33170874)
chr1 (1-90)||(5533331-5533421)
chr1 (7-89)||(35392295-35392376)
chr1 (107-164)||(34247151-34247208)
chr1 (1-90)||(50146315-50146404)
chr1 (1-73)||(10925976-10926048)
chr1 (1-89)||(43235774-43235864)
chr1 (40-90)||(17322628-17322678)
chr1 (41-90)||(6221737-6221785)
chr1 (3-32)||(52127521-52127550)
chr1 (1-33)||(27906779-27906811)
[»] scaffold0070 (1 HSPs)
scaffold0070 (1-164)||(1351-1513)
[»] scaffold0018 (1 HSPs)
scaffold0018 (4-90)||(173516-173602)
[»] scaffold1590 (1 HSPs)
scaffold1590 (1-90)||(264-353)
[»] scaffold0097 (1 HSPs)
scaffold0097 (5-95)||(38937-39027)
[»] scaffold1320 (1 HSPs)
scaffold1320 (1-89)||(1362-1450)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-89)||(206496-206584)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-90)||(230865-230954)
[»] scaffold0182 (1 HSPs)
scaffold0182 (6-90)||(23999-24083)
[»] scaffold0001 (1 HSPs)
scaffold0001 (40-156)||(183107-183222)
[»] scaffold0022 (2 HSPs)
scaffold0022 (1-90)||(40093-40184)
scaffold0022 (1-90)||(138153-138244)
[»] scaffold0229 (1 HSPs)
scaffold0229 (3-95)||(23893-23985)
[»] scaffold0227 (1 HSPs)
scaffold0227 (51-89)||(16123-16161)
[»] scaffold0003 (1 HSPs)
scaffold0003 (17-70)||(351360-351413)


Alignment Details
Target: chr6 (Bit Score: 220; Significance: 1e-121; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 28075794 - 28076062
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
T  28075794 catgtatacggtagtcattttcacctttgggtgtatcgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctttttaaaa 28075893  T
Q  101 nnnnnn---tacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttaggacgaccctgatgattgtgttatgttaggc 197  Q
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28075894 taaaaaaaatacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttaggacgaccctgatgattgtgttatgttaggc 28075993  T
Q  198 atgaatcgccttatgggaaatcacatagaccaaacagaattcagatagcatggagaaacaggaagaaga 266  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28075994 atgaatcgccttatgggaaatcacatagaccaaacagaattcagatagcatggagaaacaggaagaaga 28076062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 27788783 - 27788618
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||       
T  27788783 catgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaaaattgctctttt--a 27788686  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
          |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  27788685 aaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagg 27788618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 20711815 - 20711635
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       
T  20711815 catgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctcttttaaa 20711716  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattctta-ggacgaccctgatg 180  Q
          |||||||||||||| | |||| |||||||||||||||||| |||||||||| |||||| | ||||| ||||||||    
T  20711715 aaaaaatacgttttgattttatgactgacctcttttcattcccagaaccgagcctccgaattctcagggacgtccctgatg 20711635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 13727494 - 13727331
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||||| |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||       
T  13727494 catgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaa 13727395  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          || ||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  13727394 aaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 13727331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 17353965 - 17354132
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||| ||||||||||||| |||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||       
T  17353965 catgtatacgatagtcattttcacatttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacattgctttttttaa 17354064  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
          |||||||||||||| |||||| |||||||||||||| |||| ||||||||| ||||||||||    
T  17354065 aaaaaatacgttttgattttatcactgacctcttttcattccaagagtcgagcctccgaattcttagg 17354132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 21479505 - 21479669
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgct-tttttnn 99  Q
    |||||||||||||||||||||||||| |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||       
T  21479505 catgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaa 21479604  T
Q  100 nnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
           || ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  21479605 aaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccaaattct 21479669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 21280556 - 21280719
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||| |||| |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||       
T  21280556 catgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaa 21280655  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          || ||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  21280656 aaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 21280719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 33774128 - 33774292
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgct-tttttnn 99  Q
    |||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||       
T  33774128 catgtatacggtagtcattttcacatttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattactcttttaaa 33774227  T
Q  100 nnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
           || ||||||||||| | |||||||||||||||||  ||||||||||||||| ||||||    
T  33774228 aaaaaattatgttttgattttattactggcctcttttcattttcagagccgagcctccgaattct 33774292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 235321 - 235153
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatac--ggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttn 98  Q
    ||||||||||||||||||||||| |||||||||||  | ||||||||  ||||||||||||||||||||||||||||||||||||| ||||||| ||||     
T  235321 catgtatacggtagtcattttcatctttgggtgtacggtatatatacccggcaccttatatttatcttttaaaaaatataaatagatcattgct-tttta 235223  T
Q  99 nnnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
            |||||||||||||| ||||||| |||||||||||| || |||||| ||||| ||||||||||    
T  235222 aaaaaaaatacgttttgattttatcactggtctcttttcattctcatagccgaacctccgaattcttagg 235153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 180 - 265
Target Start/End: Original strand, 28036309 - 28036394
Alignment:
Q  180 gattgtgttatgttaggcatgaatcgccttatgggaaatcacatagaccaaacagaattcagatagcatggagaaacaggaagaag 265  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  28036309 gattgtgttacgttaggcatgaatcgccttatgggaaatcagatagaccaaacagaattcagatagcatggagaaacaggaagaag 28036394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 19737787 - 19737611
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||||| | |||||| || |||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||       
T  19737787 catgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatctttaaaaaaatataaatagaacattgctcttttaaa 19737688  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattctta-ggacgaccctga 178  Q
           || |||||||||| ||||||||||||||||| ||| |||||||| ||| |||||||| | ||||||||||||    
T  19737687 aaaaaa-acattttgattttatcactggcctcttttca-tcctagagccgaaccttcaaattctcagggacgaccctga 19737611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 1155944 - 1155775
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttt--tn 98  Q
    |||||||||||||||||||||||||| ||| |||| || ||||||| | |||||| |||||||||||||||||||||||||||||||||||| |||        
T  1155944 catgtatacggtagtcattttcacctctggatgtaccgcatatatatgacaccttgtatttatcttttaaaaaatataaatagaacattgctctttaaaa 1155845  T
Q  99 nnnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
            ||| |||||||||| |||||| |||||||||||||| ||| ||||||||||||||| |||||    
T  1155844 aaaaaaattactttttgattttatcactgacctcttttcattcctagaaccgagcctccaaatttttagg 1155775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 27314259 - 27314113
Alignment:
Q  16 cattttcacctttgggtgtatcgaatatatacggcaccttatatttatc-ttttaaaaaatataaatagaacattgcttttttnnnnnnnnntacgtttt 114  Q
    ||||||||||| || ||||| || |||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||         ||||||||    
T  27314259 cattttcacctctgagtgtaccgcatatatacggcaccttgtatttatctttttaaaaaatataaatagaacattgctctttt-aaaaaaaatacgtttt 27314161  T
Q  115 gattttttcactggcctcttttcattcccagagccgagcctccaaatt 162  Q
    |||||| |||||||||||||||||||||||||| ||||||||| ||||    
T  27314160 gattttatcactggcctcttttcattcccagagtcgagcctccgaatt 27314113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 30832619 - 30832457
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||| |||||||||||||||||| || |||||||| |  |||||||||||| ||| ||||||| ||||||||||| |||||||||||| ||  ||||       
T  30832619 catgcatacggtagtcattttcatctctgggtgtaccacatatatacggcatcttgtatttattttttaaaaaatgtaaatagaacatcgcgctttt-ta 30832521  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          |||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||    
T  30832520 aaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagccttcgaattct 30832457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 181 - 265
Target Start/End: Original strand, 28018639 - 28018723
Alignment:
Q  181 attgtgttatgttaggcatgaatcgccttatgggaaatcacatagaccaaacagaattcagatagcatggagaaacaggaagaag 265  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||  |||||||||    
T  28018639 attgtgttatgttaggtatgaatcgccttatgggaaatcacatagaccaaacagaattcaggttgcatggagaagtaggaagaag 28018723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 24711094 - 24711007
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacat 88  Q
    |||||||||||||||||||||||||| || ||||| |  |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  24711094 catgtatacggtagtcattttcacctctgagtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacat 24711007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 176 - 265
Target Start/End: Original strand, 27922120 - 27922209
Alignment:
Q  176 tgatgattgtgttatgttaggcatgaatcgccttatgggaaatcacatagaccaaacagaattcagatagcatggagaaacaggaagaag 265  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||  || |||||||||| | ||||||| |||||||||||||    
T  27922120 tgatgattgtgttatgttaggtatgaatcgccttatgggaaatcacatagagtaagcagaattcaggttgcatggacaaacaggaagaag 27922209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 34397868 - 34397964
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctttttt 97  Q
    ||||| |||| |||||||||| |||||| |||||| || ||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  34397868 catgtttacgatagtcatttttacctttaggtgtaccgcatatatacgtcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt 34397964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 2477679 - 2477590
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||||||| |||||||| ||| ||||||||| ||||||| | |||||| ||||||||||||||||||| ||||| ||||||||    
T  2477679 catgtatacggtagtgattttcacattttggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaatttaaattgaacattg 2477590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 20611801 - 20611889
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacatt 89  Q
    ||||||||||||||| |||||||||||||| ||| ||| ||||||||| |||||| |||||||| |||||||||| ||| |||||||||    
T  20611801 catgtatacggtagtgattttcacctttggatgtgtcgtatatatacgacaccttgtatttatcgtttaaaaaatttaagtagaacatt 20611889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 182 - 265
Target Start/End: Original strand, 28003936 - 28004019
Alignment:
Q  182 ttgtgttatgttaggcatgaatcgccttatgggaaatcacatagaccaaacagaattcagatagcatggagaaacaggaagaag 265  Q
    |||||||||  |||| ||||||||||||||||||||||| ||||| |||||| ||||||||| ||||||| |||||||||||||    
T  28003936 ttgtgttattgtaggaatgaatcgccttatgggaaatcatatagagcaaacaaaattcagattgcatggataaacaggaagaag 28004019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 6159453 - 6159538
Alignment:
Q  5 tatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||| |||| ||||||||  |||| || ||||||||| ||| || ||||||||||||||||||||||||||||||||||    
T  6159453 tatacggtagtgatttccacctttgaatgtaccgcatatatacgacacattgtatttatcttttaaaaaatataaatagaacattg 6159538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 21183770 - 21183686
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaa 85  Q
    ||||||||||||||| ||||||| ||||||||||| |  |||||||||  || || ||||||||||||||||||| |||||||||    
T  21183770 catgtatacggtagtgattttcaactttgggtgtaccacatatatacgctactttgtatttatcttttaaaaaatttaaatagaa 21183686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 30121783 - 30121862
Alignment:
Q  11 gtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||| |||||||||||||| ||||||| ||||||| | |||||| ||||||| ||||||||||| |||||| |||||||    
T  30121783 gtagtgattttcacctttggatgtatcgcatatatatgacaccttgtatttattttttaaaaaatttaaataaaacattg 30121862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 4036963 - 4037031
Alignment:
Q  5 tatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaa 73  Q
    ||||||||||| || || ||||||||||||| |  |||||||||||||||| ||||||||| |||||||    
T  4036963 tatacggtagtgatctttacctttgggtgtaccatatatatacggcaccttgtatttatctcttaaaaa 4037031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 168
Target Start/End: Original strand, 19987215 - 19987326
Alignment:
Q  54 ttatatttatcttttaaaaaatataaatagaacattgcttttttnnnnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagc 153  Q
    |||||||||||||| |||||||||||||||| |||||||||| |         ||||||||||  || |||||| |||||||||||||  |||||||| |    
T  19987215 ttatatttatctttaaaaaaatataaatagatcattgcttttct-taaaaaaatacgttttga--ttatcactgacctcttttcattctgagagccgatc 19987311  T
Q  154 ctccaaattcttagg 168  Q
    |||| ||||||||||    
T  19987312 ctccgaattcttagg 19987326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 182 - 265
Target Start/End: Original strand, 28047505 - 28047588
Alignment:
Q  182 ttgtgttatgttaggcatgaatcgccttatgggaaatcacatagaccaaacagaattcagatagcatggagaaacaggaagaag 265  Q
    ||||||||||||||| || |||| |||||| ||| ||||| |  | |||||||||||||| | |||||||||| ||||||||||    
T  28047505 ttgtgttatgttaggtatcaatcaccttattggagatcacttgcagcaaacagaattcaggttgcatggagaagcaggaagaag 28047588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 164
Target Start/End: Complemental strand, 24710984 - 24710928
Alignment:
Q  108 acgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
    ||||||||||||| |||||  ||||||||||||||| |||| |||||||| ||||||    
T  24710984 acgttttgattttatcactaacctcttttcattccctgagctgagcctccgaattct 24710928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 179
Target Start/End: Original strand, 20611905 - 20611977
Alignment:
Q  108 acgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg-acgaccctgat 179  Q
    ||||||| ||||||| |  |||||||||||| |  ||||||||||||||| ||||| |||| |||||||||||    
T  20611905 acgtttttatttttttatgggcctcttttcacttacagagccgagcctccgaattcgtaggaacgaccctgat 20611977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 121; Significance: 5e-62; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 16198886 - 16198719
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||        
T  16198886 catgtatacggtagtcattttcacctttgggtgtatcgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacattgctttttaaaa 16198787  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
          |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  16198786 aaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagg 16198719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 9364299 - 9364466
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  9364299 catgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttaaaaa 9364398  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
          |||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||    
T  9364399 aaaaaatacgttttgattttatcactggcctcttttcattcccagagctgagcctccgaattcttagg 9364466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 38869455 - 38869276
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||       
T  38869455 catgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacattgctctttt-aa 38869357  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattctta-ggacgaccctgatg 180  Q
          |||||||||||||| | |||| ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  38869356 aaaaaatacgttttgattttataactgacctcttttcattcccagagccgagcctccgaattcttagggacggccctgatg 38869276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 34756458 - 34756295
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||||| |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||       
T  34756458 catgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaa 34756359  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          || ||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  34756358 aaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 34756295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 27924090 - 27924256
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||| |||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||       
T  27924090 catgtatacggtagtcatttttacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaataggtcattgctttttttta 27924189  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttag 167  Q
          |||||||||||||| |||||||||||||||||||| ||||| |||||| || |||||||||    
T  27924190 aaaaaatacgttttgattttatcactggcctcttttcattctcagagtcgagcccccgaattcttag 27924256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 27079019 - 27079200
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgct-tttttnn 99  Q
    ||||||||| |||||||||||||||||| |||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||       
T  27079019 catgtatacagtagtcattttcacctttaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaa 27079118  T
Q  100 nnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattctta-ggacgaccctgatg 180  Q
           |||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||| | ||||| ||||||||    
T  27079119 aaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattctcagggacggccctgatg 27079200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 7670932 - 7671106
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatctttt-aaaaaatataaatagaacattgctttttt-- 97  Q
    ||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||      
T  7670932 catgtatacggtagtcattttcacctttgggtgtaccgtaaatatacggcaccttatatttatcttttaaaaaaatataaatagaacattgctttttttt 7671031  T
Q  98 ------nnnnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattctta 166  Q
                   |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  7671032 tttaaaaaaaaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattctta 7671106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 28822434 - 28822262
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctttttt--- 97  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       
T  28822434 catgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctcttttaaa 28822335  T
Q  98 --nnnnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
               |||||||||||||| |||||  |||||||||||||||| |||||| ||||| ||||||||||    
T  28822334 aaaaaaaaaaatacgttttgattttatcactaacctcttttcattcccaaagccgaacctccgaattcttagg 28822262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 36187971 - 36187809
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||||| |||||||| || |||||||||||||||| ||||||| |||||||||||||||||||||||| ||| ||||       
T  36187971 catgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatattttaaaaaatataaatagaacatcgctcttttaaa 36187872  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
           ||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||    
T  36187871 aaaaaa-acgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattct 36187809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 2274900 - 2275061
Alignment:
Q  3 tgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnnnn 102  Q
    |||||||||||||||||||||||| ||||||||  | |||||||||  ||||| |||||||||||||||||||||||||||||||| ||| ||||         
T  2274900 tgtatacggtagtcattttcacctctgggtgtactgcatatatacgataccttgtatttatcttttaaaaaatataaatagaacatcgctcttttaaaaa 2274999  T
Q  103 nnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
        |||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||    
T  2275000 aaaatacgttttgattttatcactggcctcttttcattcccagaaccgagcctccgaattct 2275061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 16799419 - 16799250
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaaca-ttgct-tttttn 98  Q
    ||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||||||||| || || ||||      
T  16799419 catgtatacggtaatcattttcacctttgggtgtaccgcatatatacggcaccttatatttattttttaaaaaatataaatagaacatttactcttttaa 16799320  T
Q  99 nnnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
            |||||||||||||| |||||| | ||||||||||||||||||||||||||| ||||||||||    
T  16799319 aaaaaaaatacgttttgattttatcactgacatcttttcattcccagagccgagcctccgaattcttagg 16799250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 30854337 - 30854498
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||| ||||||||||||||| || ||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||       
T  30854337 catgtatacgatagtcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaa 30854436  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaatt 162  Q
          |||||||| ||||| || ||| ||| ||||||||||||||||||||||||||||||    
T  30854437 aaaaaatacgttttaattttatcgctgaccttttttcattcccagagccgagcctccaaatt 30854498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 31194703 - 31194544
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||| |||||||||| ||||| || || |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||       
T  31194703 catgtatacggtagt-attttcacctctgggtttaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt-aa 31194606  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaatt 162  Q
          |||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||    
T  31194605 aagaaatacgttttgattttatcactggtctcttttcattcccagagccgagcctccgaatt 31194544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 19523207 - 19523370
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||| ||||||||||||||||| |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||  ||| |||        
T  19523207 catgtatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacaccgctctttaaaa 19523306  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
           ||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||    
T  19523307 aaaaaacacgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattct 19523370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 22986650 - 22986487
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||||| |||||||| || ||||||||| ||| || ||||| ||||||||||||||| |||||||||||||| ||||       
T  22986650 catgtatacggtagtcattttcacctatgggtgtaccgcatatatacgacactttgtatttgtcttttaaaaaatattaatagaacattgctcttttaaa 22986551  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          |||||||||||||| |||||||||||||||||||| |||||| |||||||| ||||||    
T  22986550 aaaaattacgttttgattttatcactggcctcttttcattctcagagctgagcctccgaattct 22986487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 5 - 180
Target Start/End: Complemental strand, 16592162 - 16591987
Alignment:
Q  5 tatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnnnnnn 104  Q
    |||||||||||||||||||||| |||||||| || ||||||||| |||| | ||||||||||||| |||||||||||||||||||||| ||||           
T  16592162 tatacggtagtcattttcacctctgggtgtaccgcatatatacgacaccctgtatttatcttttagaaaatataaatagaacattgctctttt-aaaaaa 16592064  T
Q  105 nntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct-taggacgaccctgatg 180  Q
      || ||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||  |||||| ||||||||    
T  16592063 aatatgttttgattttatcattggcctcttttcattctcagagccgagcctccaaattctcaaggacggccctgatg 16591987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 15480181 - 15480020
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||| ||||||||||||||||||||| |||||||| || ||||||||| || ||| |||||||||||||||||||||||||||||||| | | |||        
T  15480181 catgcatacggtagtcattttcacctctgggtgtaccgcatatatacgacatcttgtatttatcttttaaaaaatataaatagaacatcggtcttt--aa 15480084  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          || ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  15480083 aaaaaatatgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattct 15480020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 94
Target Start/End: Complemental strand, 40389623 - 40389535
Alignment:
Q  6 atacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttt 94  Q
    ||||||||||||||||||||||||| |||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  40389623 atacggtagtcattttcacctttggatgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacattgcttt 40389535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 7338021 - 7338170
Alignment:
Q  15 tcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnnnnnnnntacgtttt 114  Q
    |||||||||||||| |||||| || ||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||           |||||||    
T  7338021 tcattttcacctttaggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctctttaaaaaaaaaaaacgtttt 7338120  T
Q  115 gattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
    |||||| ||  || |||||||||||||| |||||||||||||||||||||    
T  7338121 gattttatccttgacctcttttcattcctagagccgagcctccaaattct 7338170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 23284154 - 23284022
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||||| ||||||||||| || ||||||||| |||||| ||||||   ||||||||||||||||||||||||||| ||||       
T  23284154 catgtatacggtagtcattttcatctttgggtgtaccgcatatatacgacaccttgtatttagtctttaaaaaatataaatagaacattgctctttt-aa 23284056  T
Q  101 nnnnnntacgttttgattttttcactggcctctt 134  Q
          |||||||||||||| |||||||||||||    
T  23284055 aaaaaatacgttttgattttatcactggcctctt 23284022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 31881525 - 31881364
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgct-tttttnn 99  Q
    ||||||||||||||| ||||||| || ||| |||  || |||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||       
T  31881525 catgtatacggtagt-attttcatctctggatgttccgcatatatacggcaccgtgtatttatcttttaaaaaatataaatagaacattgctcttttaaa 31881427  T
Q  100 nnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaatt 162  Q
            ||||||||||||| | |||| || ||||||||||||||||||||||||| |||||    
T  31881426 aaaaaaaaacgttttgattttattactgaccacttttcattcccagagccgagcctctaaatt 31881364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 10543682 - 10543769
Alignment:
Q  2 atgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacatt 89  Q
    |||||||||||||| |||||||||||||| ||||||| ||||||||  |||||||||||||||||||||||||| ||| | |||||||    
T  10543682 atgtatacggtagtgattttcacctttggatgtatcgcatatatacatcaccttatatttatcttttaaaaaatttaagtggaacatt 10543769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 2024734 - 2024645
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||||||| |||||| ||||||| |||||||||||||  ||||||||||||| || ||||||||||| ||||||| ||||||||||||||    
T  2024734 catgtatatggtagtgattttcatctttgggtgtatcacatatatacggcacattgtatttatctttaaaaaaatttaaatagaacattg 2024645  T

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Target: chr5; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 14318477 - 14318388
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||||||| |||||||  ||||| ||||||  ||||||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  14318477 catgtatacggtagtgattttcatttttggatgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattg 14318388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 36868968 - 36868879
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||||||| |||||||| |||||||||| |  ||||||||| |||||| ||||||||||||||||||  ||||||||||||||    
T  36868968 catgtatacggtagtgattttcacatttgggtgtaccacatatatacgacaccttgtatttatcttttaaaaaaattaaatagaacattg 36868879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 26719041 - 26718953
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacatt 89  Q
    ||||||| ||||||| ||||||||||||| |||||||| ||||||||| ||| || ||||||||||||||||| | |||||||||||||    
T  26719041 catgtatgcggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttttaaaaattttaaatagaacatt 26718953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 26988785 - 26988697
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacatt 89  Q
    ||||||| ||||||| ||||||||||||| |||||||| ||||||||| ||| || ||||||||||||||||| | |||||||||||||    
T  26988785 catgtatgcggtagtgattttcacctttgagtgtatcgcatatatacgacactttgtatttatcttttaaaaattttaaatagaacatt 26988697  T

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Target: chr5; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 34425911 - 34426000
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||||| | ||||| | |||| ||||||||  |||||||||||||||| |||||||||||||||||||  |||||||||||||    
T  34425911 catgtatacggtaatgattttaatctttaggtgtatcacatatatacggcaccttgtatttatcttttaaaaaattgaaatagaacattg 34426000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 2530989 - 2530901
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacatt 89  Q
    ||||||||| ||||| |||||||||||||| |||| || ||||||||| ||| || ||||||||||||||||||  |||||||||||||    
T  2530989 catgtatacagtagtgattttcacctttggatgtaccgtatatatacgacacattgtatttatcttttaaaaaacttaaatagaacatt 2530901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 24395751 - 24395835
Alignment:
Q  5 tatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacatt 89  Q
    |||||||| || |||||||||||||| ||||| | ||||||||  |||||| ||||||||||||||||||| |||||||||||||    
T  24395751 tatacggtggtgattttcacctttggatgtattgtatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacatt 24395835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 1366614 - 1366529
Alignment:
Q  5 tatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||| |||||||| ||| ||||||||| ||||||||  || ||| |||||||||| |||||||| ||||||||||||||    
T  1366614 tatacggtagtgattttcacatttaggtgtatcgcatatataccacatcttgtatttatcttataaaaaatttaaatagaacattg 1366529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 2412096 - 2412185
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||| ||||| |||||||| ||||| || |||| ||||||||| ||| || ||||||| ||||||||||| ||||||||||||||    
T  2412096 catgtatacagtagtgattttcacatttggatgcatcgcatatatacgacactttgtatttattttttaaaaaatttaaatagaacattg 2412185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 40794419 - 40794330
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||||||| |||||||||||| ||||||||  |||| |||||| | || ||||| ||||||||||||| |||||| |||||||    
T  40794419 catgtatacggtagtgattttcaccttttggtgtatcatatatttacggctctttgtatttgtcttttaaaaaatttaaataaaacattg 40794330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 168
Target Start/End: Complemental strand, 40389518 - 40389463
Alignment:
Q  113 ttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
    |||||||| |||||| | ||||||||||||||||||||||||||| ||||||||||    
T  40389518 ttgattttatcactgacatcttttcattcccagagccgagcctccgaattcttagg 40389463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 11242410 - 11242321
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||||||| |||| || |||||| ||||||  ||||||||  ||  || ||||||||||||||||||  ||||||||||||||    
T  11242410 catgtatacggtagtgatttccatctttggttgtatcacatatatacatcattttgtatttatcttttaaaaaaattaaatagaacattg 11242321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 22648824 - 22648739
Alignment:
Q  5 tatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||| ||||| ||| |||||||||| |||  |  ||||||||| ||| || ||||||||||||||||||| ||||||||||||||    
T  22648824 tatacagtagtgattgtcacctttggatgtgccacatatatacgacacattgtatttatcttttaaaaaatttaaatagaacattg 22648739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 33037788 - 33037877
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||||| |  ||||||||||||||||||    |||||||||  | ||| ||||||||||||||||||| |||||| |||||||    
T  33037788 catgtatacggtaatggttttcacctttgggtgtacaacatatatacgatatcttgtatttatcttttaaaaaatttaaataaaacattg 33037877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 15639652 - 15639724
Alignment:
Q  2 atgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaa 74  Q
    |||||||||  ||| ||||||| |||||| ||||||| ||||||||| |||||| ||||||||||| ||||||    
T  15639652 atgtatacgacagtgattttcatctttggatgtatcgcatatatacgtcaccttgtatttatctttaaaaaaa 15639724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 10407469 - 10407558
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||| |||||||||| |||||||| ||| | ||||    |||| |||| |||||| | ||||||||||||||||| ||||||||||||||    
T  10407469 catgcatacggtagtaattttcacttttagatgtacaacatatgtacgacaccttgtgtttatcttttaaaaaatttaaatagaacattg 10407558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 90
Target Start/End: Original strand, 606211 - 606251
Alignment:
Q  50 caccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||||| ||||||||||||||||||| ||||||||||||||    
T  606211 caccttgtatttatcttttaaaaaatttaaatagaacattg 606251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 142
Target Start/End: Complemental strand, 23284014 - 23283979
Alignment:
Q  107 tacgttttgattttttcactggcctcttttcattcc 142  Q
    |||||||||||||| |||||||||||||||||||||    
T  23284014 tacgttttgattttatcactggcctcttttcattcc 23283979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 41911705 - 41911636
Alignment:
Q  5 tatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaa 74  Q
    |||||| |||| ||||| || |||||||||| ||  |||||||| |||||| ||||| ||||||||||||    
T  41911705 tatacgatagtgatttttacttttgggtgtaccgcttatatacgacaccttgtatttctcttttaaaaaa 41911636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 17344969 - 17345053
Alignment:
Q  6 atacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||||||||| ||||| | ||||||||||| || ||||| | | || ||| |||||||  | |||||||| ||||||||||||||    
T  17344969 atacggtagtaatttttatctttgggtgtaccgcatatacatgacatcttgtatttattatataaaaaatttaaatagaacattg 17345053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 106546 - 106713
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||       
T  106546 catgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacattgttcttttaaa 106645  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
          |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  106646 aaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccaaattcttagg 106713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 7e-58; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 10329504 - 10329336
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||||||||||| |  |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       
T  10329504 catgtatacggtagtcattttcacctttgggttttcctcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctttttttta 10329405  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagga 169  Q
          |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  10329404 aaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagga 10329336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 20091375 - 20091207
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg-cttttttnn 99  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||      
T  20091375 catgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagatcattgttttttttaa 20091276  T
Q  100 nnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
           |||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||    
T  20091275 aaaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagg 20091207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 23551165 - 23550986
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaa-aaaatataaatagaacattgcttttttnn 99  Q
    |||||||||||||||||||||||||||||| |||| || ||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||      
T  23551165 catgtatacggtagtcattttcacctttggatgtaccgcatatatacgacaccttatatttatcttttaaaaaaatataaatagatcattgctttttt-t 23551067  T
Q  100 nnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattctta-ggacgaccctgat 179  Q
           || ||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||    
T  23551066 aaaaaaatatgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagggacgaccctgat 23550986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 8171633 - 8171471
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||||| || |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||       
T  8171633 catgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt-aa 8171535  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          |||| ||||||||| |||||| ||||||||||||||||||||||||||||| ||||||    
T  8171534 aaaaaatacgctttgattttatcactgacctcttttcattcccagagccgagcctccgaattct 8171471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 24525779 - 24525599
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctttt---tt 97  Q
    |||||||||||||||||||||||| |||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||         
T  24525779 catgtatacggtagtcattttcacttttgggtgtaccgcatatacacggcaccttatatttatcttttaaaaaatataaatagaacattgtttttaaaaa 24525680  T
Q  98 nnnnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattctta-ggacgaccctg 177  Q
             |||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  24525679 aaaaaaaaatacgttttgattttatcacaggcctcttttcattcccagagccgagcctccgaattcttagggacgaccctg 24525599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 29077228 - 29077390
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||||| | |||||| || ||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||       
T  29077228 catgtatacggtagtcattttcacctcttggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctctttt-aa 29077326  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          |||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||    
T  29077327 aaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattct 29077390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 18776860 - 18776697
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||| | |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||       
T  18776860 catgtatacggtagtcattttcacatctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaa 18776761  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          ||  |||||||||| |||||| |||||||||||| |||||||||||||||| ||||||    
T  18776760 aaaaattatattttgattttatcactgacctcttttcatttccagagccgagcctccgaattct 18776697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 19692102 - 19692269
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||  |||||||||||||||| |||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||       
T  19692102 catgtatacgaaagtcattttcacctttaggtgtaccgcatatatatggcaccttatatttatcttttaaaaaatataaatagaacattgctcttttaaa 19692201  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
          |||||||||||||| ||||||| | ||||||||| |||||||||||| ||| ||||||||||    
T  19692202 aaaaaatacgttttgattttatcactggacacttttcatttccagagccgagcttccgaattcttagg 19692269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 47985064 - 47984895
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaa-aaaatataaatagaacattgctttttt-n 98  Q
    |||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||      
T  47985064 catgtatacggtggtcattttcacctttgggtgtaccgcatatatacggcaccttatatttttcttttaaaaaaatataaatagaacattgcttttttaa 47984965  T
Q  99 nnnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
             ||||||||||||| |||||||| ||||||||||||||||||||||||  | ||||||||||    
T  47984964 aaaaaaaacacgttttgattttatcactggcatcttttcattcccagagccgagccaacgaattcttagg 47984895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 48983938 - 48983766
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctttttt--- 97  Q
    ||||||||||||||| ||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||       
T  48983938 catgtatacggtagttattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagatcattgttttttttaa 48983839  T
Q  98 --nnnnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
               |||||||||||||| ||| |||||||||||||||| ||||||||||||||| ||||||||||    
T  48983838 aaaaaaaaaaatacgttttgattttatcattggcctcttttcattctcagagccgagcctccgaattcttagg 48983766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 26254015 - 26254164
Alignment:
Q  15 tcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnnnnnnnntacgtttt 114  Q
    ||||||||| ||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||         || |||||    
T  26254015 tcattttcatctttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaaaatatgtttt 26254114  T
Q  115 gattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
    |||||| |||||| |||||||||||||||| |||||||||||| ||||||    
T  26254115 gattttatcactgacctcttttcattcccaaagccgagcctccgaattct 26254164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 38414970 - 38414793
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||| ||||||||||||||||||||||||| |  ||||||||| ||||||||||||||||||||||||||| ||||||||| ||||| ||||       
T  38414970 catgtatacagtagtcattttcacctttgggtgtaccacatatatacgtcaccttatatttatcttttaaaaaatacaaatagaacgttgctcttttgca 38414871  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattctta-ggacgaccctg 177  Q
          |||||||||||||| | ||| | ||||||||||| |||||| ||||||||| |||||||| |||||||||||    
T  38414870 aaaaaatacgttttgattttatgactagtctcttttcatttccagagtcgagcctccgaattcttagggacgaccctg 38414793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 12596381 - 12596221
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||| ||||||||||||||||||||| |||||||| |  |||||||||||||||| ||||||||||| |||||||||||||||||||| ||| |||        
T  12596381 catgcatacggtagtcattttcacctctgggtgtaccacatatatacggcaccttgtatttatctttaaaaaaatataaatagaacatcgctcttt---a 12596285  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
           ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  12596284 aaaaaaaacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattct 12596221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 168
Target Start/End: Original strand, 8239699 - 8239861
Alignment:
Q  5 tatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnnnnnn 104  Q
    ||||||||| |||||||||| |||||||||| |  ||||||||||||| |||||||||| ||||||||||||||||||||||||| || ||||           
T  8239699 tatacggtaatcattttcacatttgggtgtaccacatatatacggcacattatatttattttttaaaaaatataaatagaacattactctttt-aaaaaa 8239797  T
Q  105 nntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
      |||||||| ||||| ||| ||||||||||||||| |||||||||||||||||||||||||||    
T  8239798 aatacgttttcattttatcattggcctcttttcatttccagagccgagcctccaaattcttagg 8239861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 10955492 - 10955588
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctttttt 97  Q
    |||||||||||||||||||||||||| || ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  10955492 catgtatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacatcgctctttt 10955588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 25010441 - 25010601
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaa--tataaatagaacattgcttttttn 98  Q
    ||||||||||||||||||||||||||||||||||| ||           |||||||||||||||||||||||||  |||||||||| ||||||||||||     
T  25010441 catgtatacggtagtcattttcacctttgggtgtaccgc----------caccttatatttatcttttaaaaaaaatataaatagatcattgcttttttt 25010530  T
Q  99 nnnnnnnn-tacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
             |||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||    
T  25010531 tttaaaaaatacgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattcttagg 25010601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 28749718 - 28749879
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgct-tttttnn 99  Q
    ||||||||||||||| |||||||| | || ||||| || |||||||||||||||| |||||||||||| |||||||||||||||| |||||| ||||       
T  28749718 catgtatacggtagt-attttcacatctgagtgtaccgcatatatacggcaccttgtatttatcttttcaaaaatataaatagaatattgctcttttgaa 28749816  T
Q  100 nnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaatt 162  Q
           || ||||||||||| ||| ||| |||||||||||||||||||||||||||| ||||    
T  28749817 aaaaaaatatgttttgattttatcattggtctcttttcattcccagagccgagcctccgaatt 28749879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 169
Target Start/End: Complemental strand, 33162418 - 33162265
Alignment:
Q  16 cattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnnnnnnnntacgttttg 115  Q
    ||||||||||||| |||||| || |||||||||||||||| |||||||||||||||||||||||||||| ||||||| |||          ||||||||     
T  33162418 cattttcacctttaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagagcattgctctttaaaaaaaaaatacgtttta 33162319  T
Q  116 attttttcactggcctcttttcattcccagagccgagcctccaaattcttagga 169  Q
    ||||| ||| || |||||||||| ||||||| ||||  |||| |||||||||||    
T  33162318 attttatcattgacctcttttcactcccagaaccgaatctccgaattcttagga 33162265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 23859081 - 23859169
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacatt 89  Q
    ||||||||||||||| ||||||| |||||||||||||| |||||||||| || || ||||||||||||||||||| |||||||||||||    
T  23859081 catgtatacggtagtaattttcatctttgggtgtatcgcatatatacggtacattgtatttatcttttaaaaaatttaaatagaacatt 23859169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 9021894 - 9021812
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatag 83  Q
    ||||||||||||||| ||||||||||||||||||| || ||||||||||||| || ||||||||||||||||||| |||||||    
T  9021894 catgtatacggtagtgattttcacctttgggtgtaccgcatatatacggcacattgtatttatcttttaaaaaatttaaatag 9021812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 7398459 - 7398548
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||||||| |||||| |||||||||||| ||||||||  ||||||| |||||||| ||||||||||| ||||||| ||||||||||||||    
T  7398459 catgtatatggtagtgattttcacctttaggtgtatcacatatatatggcaccttgtatttatctttcaaaaaatttaaatagaacattg 7398548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 36891586 - 36891674
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacatt 89  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||  ||| || |||| ||| ||||||||||||||||||||||||    
T  36891586 catgtatacggtagtgattttcacctttggatgtaccgaatatatacaacacattgtattcatcatttaaaaaatataaatagaacatt 36891674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 2611356 - 2611267
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||| || || ||||||||| ||| ||||| || ||||||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  2611356 catgtatacagttgtgattttcaccattgtgtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattg 2611267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 6765771 - 6765686
Alignment:
Q  5 tatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||| |||||||||||||| ||||  |  |||||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  6765771 tatacggtagtgattttcacctttggatgtacggcttatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattg 6765686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 23744808 - 23744893
Alignment:
Q  5 tatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||| ||||| | |||| |||||| || |||||| ||||||||| ||||||||||||||||||| ||| ||||||||||    
T  23744808 tatacggtagtgatttttatctttaggtgtaccgcatatatgcggcaccttgtatttatcttttaaaaaatttaattagaacattg 23744893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 20153209 - 20153297
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacatt 89  Q
    ||||||||||| ||| ||||||| |||||||| ||||| ||||||||  ||| || ||||||||||||||||||| |||||| ||||||    
T  20153209 catgtatacggcagtgattttcatctttgggtttatcgcatatatacaacactttgtatttatcttttaaaaaatttaaataaaacatt 20153297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 23020577 - 23020498
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaat 81  Q
    ||||||||||||||| ||||||||||||| |||| | | ||||||||  |||||||||||||||||||||||||| |||||    
T  23020577 catgtatacggtagtgattttcacctttgagtgtgt-gcatatatacaacaccttatatttatcttttaaaaaatctaaat 23020498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 21763672 - 21763595
Alignment:
Q  10 ggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaaca 87  Q
    |||||| |||||||| ||| ||||||||| |||||||||  || || ||||||||||||||||||| |||||||||||    
T  21763672 ggtagtgattttcactttttggtgtatcgcatatatacgatactttgtatttatcttttaaaaaatttaaatagaaca 21763595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 27237517 - 27237428
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||||||||| |||| |||||||||||| | |  |||  ||||||||  |||||| ||||||||||||||||||| ||||||||||||||    
T  27237517 catgtatacgatagtgattttcacctttagattcatcacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattg 27237428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 12981338 - 12981422
Alignment:
Q  5 tatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacatt 89  Q
    ||||| ||||| ||||||||||||| ||||| ||  |||||| || ||||| ||||||||||||||||||  |||||||||||||    
T  12981338 tatacagtagtgattttcacctttgtgtgtaccgcgtatatatggaaccttgtatttatcttttaaaaaaattaaatagaacatt 12981422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 36903018 - 36902929
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||| ||| | |||||||||||| ||||||    ||||||||| || ||| ||||||||| ||||||||| ||||||||||||||    
T  36903018 catgtatacagtactgattttcacctttaggtgtacaacatatatacgacatcttgtatttatctattaaaaaatttaaatagaacattg 36902929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 40357368 - 40357311
Alignment:
Q  107 tacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
    |||||||||||||| |||||| ||| |||||||| |||||||||||||||| ||||||    
T  40357368 tacgttttgattttatcactgaccttttttcatttccagagccgagcctccgaattct 40357311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 12419578 - 12419500
Alignment:
Q  12 tagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||| ||||||| |||||| ||||||  | ||||| || || || ||||||||||||||||||| ||||||||||||||    
T  12419578 tagtgattttcatctttggatgtatcacacatataaggtacattgtatttatcttttaaaaaatttaaatagaacattg 12419500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 38971267 - 38971333
Alignment:
Q  7 tacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaa 73  Q
    ||||||||| |||||||| ||| |||||||   ||||||||| |||||| |||||||||||||||||    
T  38971267 tacggtagtgattttcacatttaggtgtataacatatatacgacaccttgtatttatcttttaaaaa 38971333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 18201161 - 18201234
Alignment:
Q  17 attttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||| || |||||| |  ||||||| |||| ||| ||||||| ||||||||||| |||||||| |||||    
T  18201161 attttcacccttaggtgtaccacatatatatggcatcttgtatttatattttaaaaaatttaaatagatcattg 18201234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 3e-57; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 37777317 - 37777150
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||       
T  37777317 catgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattacttttttttt 37777218  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
          |||||||||||||| |||||| ||||||||||||||||||||||||||||| |||| |||||    
T  37777217 aaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaatttttagg 37777150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 2 - 168
Target Start/End: Original strand, 32128598 - 32128764
Alignment:
Q  2 atgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnnn 101  Q
    |||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||        
T  32128598 atgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacattgctcttttaaaa 32128697  T
Q  102 nnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
         |||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||    
T  32128698 aaaaatacgttttgattttatcactgaccttttttcattcccagagccgagcctccaaattcttagg 32128764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 34027592 - 34027758
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||       
T  34027592 catgtataccgtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacattgctttttt-ta 34027690  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
          |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  34027691 aaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagg 34027758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 43455625 - 43455460
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       
T  43455625 catgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctctttt-aa 43455527  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttag 167  Q
          |||||||||||||| |||||| ||||||||||||||||||| ||||||||| |||||||||    
T  43455526 aaataatacgttttgattttatcactgacctcttttcattcccagagtcgagcctccgaattcttag 43455460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 54780790 - 54780954
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgct-tttttnn 99  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||       
T  54780790 catgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaa 54780889  T
Q  100 nnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
           |||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||    
T  54780890 aaaaaaatacgttttgattttatcactggcctcttttcattcccagagccaagcctccgaattct 54780954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 38209685 - 38209522
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||||| |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||        
T  38209685 catgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttaaaa 38209586  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          ||  |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  38209585 aaaaattatattttgattttatcactggcctcttttcatttccagagccgagcctccaaattct 38209522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 2790835 - 2790670
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||| || |||       
T  2790835 catgtatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatataaatagaacattg-ttcttttaa 2790737  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttag 167  Q
           | ||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||    
T  2790736 aaaaaaaatgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattcttag 2790670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 34768668 - 34768492
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||| |||||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       
T  34768668 catgtatacggtaatcattttcacctctgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctctttt-aa 34768570  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattctta-ggacgaccctg 177  Q
          || ||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||| | |||||||||||    
T  34768569 aaaaaatatgttttgattttatcactagcctcttttcattcccaaagccgagcctccgaattctcagggacgaccctg 34768492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 54083336 - 54083170
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||| | ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||       
T  54083336 catgtatacggtagtcatttttatctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagatcattg-tttttttta 54083238  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
          |||||||||||||| |||||| ||||||||||||| ||||||||||||||| |||| |||||    
T  54083237 aaaaaatacgttttgattttatcactgacctcttttcattctcagagccgagcctccgaatttttagg 54083170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 47129000 - 47129162
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||| |||| |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| || |||       
T  47129000 catgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg-ttcttttaa 47129098  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          ||| |||||||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  47129099 aaaaaatacattttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 47129162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 6 - 168
Target Start/End: Complemental strand, 16882484 - 16882323
Alignment:
Q  6 atacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnnnnnnn 105  Q
    ||||||||||||||||||||||| |||||| || ||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||            
T  16882484 atacggtagtcattttcaccttttggtgtaccgtatatacacggcaccttatatttatcttttaaaaagtataaatagaacattg-ttttttttaaaaaa 16882386  T
Q  106 ntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
     |||||||||||||| |||||| | |||||||||||| |||||||||||||| ||||||||||    
T  16882385 atacgttttgattttatcactgacttcttttcattcctagagccgagcctccgaattcttagg 16882323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 32915398 - 32915561
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||| ||||||| |||| |||||||| |  |||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||       
T  32915398 catgtatacggtaatcatttttacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttttaaa 32915497  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
            |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  32915498 aaaaaaaccgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattct 32915561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 19498517 - 19498680
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||| |||||||||||||||||||| |||| || ||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||       
T  19498517 catgtatacagtagtcattttcacctttggctgtaccgcatat--acggcaccttatatttatcttttaaaaaatataaatagaacattgctctttt-aa 19498613  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttag 167  Q
          |||||||||||||| ||| |||||| |||||||||| |||||||||||||| |||||||||    
T  19498614 acaaaatacgttttgattttatcattggcctgttttcattcctagagccgagcctccgaattcttag 19498680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 40089529 - 40089714
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaa---------aaatataaatagaacattgc 91  Q
    |||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||         ||||||||||| ||||||||    
T  40089529 catgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaatataaataaatataaataaaacattgc 40089628  T
Q  92 ttttttnnnnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattctta-ggacgaccctg 177  Q
    ||||||         |||||||||||||| |||||| | |||||||||||| |||||||||||||| |||||||| |||||||||||    
T  40089629 tttttt-aaaaaaaatacgttttgattttatcactgacttcttttcattccaagagccgagcctccgaattcttagggacgaccctg 40089714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 5128936 - 5128772
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||||| |||||| |  | |||||||||||||||| ||||||||||||||||||||||||||||| || ||| || |       
T  5128936 catgtatacggtagtcattttcacctctgggtgcactgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaatatcgctcttctaaa 5128837  T
Q  101 nnnnnntacgtttt-gattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
           ||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  5128836 aaaaaaaacgttttagattttatcactggcctcttttcattcccagagccgagcctctaaattct 5128772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 16845034 - 16845200
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatctttt-aaaaaatataaatagaacattgcttttttnn 99  Q
    ||||||||||||||||||||||||| |||||||||    ||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||      
T  16845034 catgtatacggtagtcattttcaccgttgggtgtactacatatatacgacaccttatatttatcttttaaaaaaatataaatagaacattgctctttt-a 16845132  T
Q  100 nnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
           |||||||||||||| ||||||| || |||||||| |||||||||||||||| ||||||||||    
T  16845133 aaaaaaatacgttttgattttatcactgg-cttttttcatttccagagccgagcctccgaattcttagg 16845200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 37514672 - 37514834
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgct-tttttnn 99  Q
    |||||||||||||||||||||||||| || ||||| || |||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||        
T  37514672 catgtatacggtagtcattttcacctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctctttaaaa 37514771  T
Q  100 nnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
           |||||||||||||| ||||||||||||||||||||||   || |||||||||||||||    
T  37514772 aaaaaaatacgttttgattttatcactggcctcttttcattccc--cgctgagcctccaaattct 37514834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 17679432 - 17679575
Alignment:
Q  20 ttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnnnnnnnntacgttttgattt 119  Q
    ||||||| |||||||| || |||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||         |||||||||||||    
T  17679432 ttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaatattgctctttt-aaaaaaaatacgttttgattt 17679530  T
Q  120 tttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
    | ||||||| ||||||||||||||||| |||||||||| ||||||    
T  17679531 tatcactggtctcttttcattcccagaaccgagcctccgaattct 17679575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 1105545 - 1105699
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||| ||||||||||||||||| | |||||| || |||||||||  ||||| ||||||||||||||||||||||||||||||||  || ||||       
T  1105545 catgtatatggtagtcattttcacctctaggtgtaccgcatatatacgataccttgtatttatcttttaaaaaatataaatagaacatcactctttt-aa 1105643  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctc 156  Q
          |||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  1105644 aaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcctc 1105699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 10978913 - 10979062
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctttttt--n 98  Q
    |||||||||||||||||||||||| | |||||||| || ||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||       
T  10978913 catgtatacggtagtcattttcacttctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaa 10979012  T
Q  99 nnnnnnnntacgttttgattttttcactggcctcttttcattcccagagc 148  Q
            |||||||||||||| |||||  ||||||||||||||||||||    
T  10979013 aaaaaaaatacgttttgattttatcactaacctcttttcattcccagagc 10979062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 164
Target Start/End: Complemental strand, 10428273 - 10428130
Alignment:
Q  19 tttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnnnnnnnntacgttttgatt 118  Q
    |||||||| |||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||          ||  ||||||||    
T  10428273 tttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgcttttt--aaaaaaaataaattttgatt 10428176  T
Q  119 ttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
    ||  ||||| ||||||||||||||||||||||||||||| ||||||    
T  10428175 ttagcactgacctcttttcattcccagagccgagcctccgaattct 10428130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 48209253 - 48209422
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgct-tttttnn 99  Q
    |||||||||||||||||| ||||| | |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||       
T  48209253 catgtatacggtagtcatattcacatctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaa 48209352  T
Q  100 nnnnnnntacgttttgat-----tttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
           |||||||||||     ||| ||||||| ||||||||| |||||||||||||||||| ||||||    
T  48209353 aaaaaaatacgttttgattttaatttatcactggtctcttttcactcccagagccgagcctccgaattct 48209422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 35779419 - 35779259
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||| ||||||||||||||||||||| || ||||||||| |||||| ||||||||||||||||||||| |||||||||||||| |||        
T  35779419 catgtatacggtaatcattttcacctttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatat-aatagaacattgctcttt--aa 35779323  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          |||||||||||||| ||||| |||||||||||||||  ||| ||| ||||| ||||||    
T  35779322 aaaaaatacgttttgattttatcactagcctcttttcattcctcgagtcgaacctccgaattct 35779259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 51964736 - 51964884
Alignment:
Q  16 cattttcacctttgggtgtatcgaatatatacggcaccttatatttatctttt---aaaaaatataaatagaacattgcttttttnnnnnnnnntacgtt 112  Q
    ||||||||||| ||||||||||| |||||||||||||||| ||||||||||||   |||||||||||||||||||||||| ||||         ||||||    
T  51964736 cattttcacctctgggtgtatcgcatatatacggcaccttgtatttatctttttaaaaaaaatataaatagaacattgctctttt-aaaaaaaatacgtt 51964834  T
Q  113 ttgattttttcactggcctcttttcattcccagagccgagcctccaaatt 162  Q
    |||||||| |||  |||||||||||||||||||||||||| |||| ||||    
T  51964835 ttgattttatcatcggcctcttttcattcccagagccgagtctccgaatt 51964884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 16922409 - 16922259
Alignment:
Q  15 tcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgct-tttttnnnnnnnnntacgttt 113  Q
    |||||||||||||||||  ||  | ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||           ||||||    
T  16922409 tcattttcacctttggggatactgcatatatacgacactttatatttatcttttaaaaaatataaatagaacattgctcttttaaaaataaaaaacgttt 16922310  T
Q  114 tgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
    ||||||| ||||||| ||||||||||||||| || ||||||||||||||||    
T  16922309 tgattttatcactggtctcttttcattcccaaagtcgagcctccaaattct 16922259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 38352349 - 38352193
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||| |||||||||||||||||||||||||||| ||           ||||||||||||||||||||||||||||||||||| |||| ||||||        
T  38352349 catgtacacggtagtcattttcacctttgggtgtaccgc----------caccttatatttatcttttaaaaaatataaatagatcattacttttt-aaa 38352261  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
          |||||||||||||| ||||||  |||||||||||||||||||||||||||| ||||||||||    
T  38352260 aaaaaatacgttttgattttatcactgatctcttttcattcccagagccgagcctccgaattcttagg 38352193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 35465120 - 35465281
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||| |||||||| ||| |||||| || ||||||||| |||||| |||||||||| ||||||||||||||| ||||||| || |||       
T  35465120 catgtatacggtagttattttcacttttaggtgtaccgcatatatacg-caccttttatttatcttgtaaaaaatataaatataacattg-ttcttttaa 35465217  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          || ||||||||||| |||||| ||||||||||||||||||  ||||||||| ||||||    
T  35465218 aaaaaatatgttttgattttatcactgacctcttttcattcccagaatcgagcctccgaattct 35465281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 4167985 - 4167910
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaata 76  Q
    |||||||| |||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  4167985 catgtataaggtagtgattttcacctttgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaata 4167910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 47 - 164
Target Start/End: Original strand, 55255316 - 55255433
Alignment:
Q  47 cggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnnnnnnnntacgttttgattttttcactggcctcttttcattcccaga 146  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| ||||         || ||||||||||| |||||||||||||||||||  ||||    
T  55255316 cggcaccttgtatttatcttttaaaaaatataaatggaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcattttcaga 55255415  T
Q  147 gccgagcctccaaattct 164  Q
    ||||||||||| ||||||    
T  55255416 gccgagcctccgaattct 55255433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 87
Target Start/End: Original strand, 13460221 - 13460306
Alignment:
Q  2 atgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaaca 87  Q
    ||||||||||||||||||||||| | ||||| || || ||||||||| |||||| |||||||||||||||||||||||||||||||    
T  13460221 atgtatacggtagtcattttcacatctgggtataccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaaca 13460306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 36118552 - 36118463
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||||||| |||||||  ||||||||||||  ||||||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  36118552 catgtatacggtagtgattttcatatttgggtgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattg 36118463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 36178685 - 36178774
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||||||| |||||| |||||||| ||||||||||||| ||||||||| |||||| ||||||||||||||| ||| ||||||||||||||    
T  36178685 catgtataaggtagtgattttcacatttgggtgtatcgcatatatacgacaccttgtatttatcttttaaataatttaaatagaacattg 36178774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 52468299 - 52468388
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||| |||||||||| |||||||||||||| |||||   |||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  52468299 catgcatacggtagtgattttcacctttggatgtataacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattg 52468388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 24396947 - 24397028
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaata 82  Q
    |||||||||| |||| ||||||||||||| |||||||  |||||||| ||||||||||||||||||||||||||| ||||||    
T  24396947 catgtatacgatagtgattttcacctttgagtgtatcacatatatactgcaccttatatttatcttttaaaaaatttaaata 24397028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 27112043 - 27112132
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||||||| |||||||| ||| ||||||||| ||||||| | |||||| ||||||||||||||||||| ||||| ||||||||    
T  27112043 catgtatacggtagtgattttcacattttggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaatttaaattgaacattg 27112132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 37745001 - 37744916
Alignment:
Q  4 gtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaa-aaaatataaatagaacat 88  Q
    |||||||||||| |||||||||||||| ||||||| |||||| || ||||||||||||||||||||| ||||| ||||||||||||    
T  37745001 gtatacggtagtgattttcacctttggatgtatcgcatatatgcgacaccttatatttatcttttaaaaaaatttaaatagaacat 37744916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 162
Target Start/End: Complemental strand, 23508564 - 23508443
Alignment:
Q  42 atatacggcaccttatatttatcttttaaaaaat-ataaatagaacattgcttttttnnnnnnnnntacgttttgattttttcactggcctcttttcatt 140  Q
    ||||||| |||||| ||||||||||||||||||| |||||||||||||||||  ||          ||| |||||||||| |||||||||||||||||||    
T  23508564 atatacgacaccttgtatttatcttttaaaaaattataaatagaacattgctcattaaaaaaaaaatacattttgattttatcactggcctcttttcatt 23508465  T
Q  141 cccagagccgagcctccaaatt 162  Q
    |||| |||||||||||| ||||    
T  23508464 cccaaagccgagcctccgaatt 23508443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 24969450 - 24969536
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctttttt 97  Q
    ||||||||||||||||||||||||||||||||||| ||           ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24969450 catgtatacggtagtcattttcacctttgggtgtaccgc----------caccttatatttatcttttaaaaaatataaatagatcattgctttttt 24969536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 51692009 - 51691913
Alignment:
Q  3 tgtatacggtagtcattttcacctttg--ggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctttttt 97  Q
    |||||| |||||| |||||||| |||   |||||| || |||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||    
T  51692009 tgtatatggtagtgattttcactttttttggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgctctttt 51691913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 10042092 - 10042005
Alignment:
Q  3 tgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||||| |||||||| ||| ||||||||  ||| |||||||||||| ||||||| |||| |||||| ||||||||||||||    
T  10042092 tgtatacggtagtgattttcacatttaggtgtatcacatacatacggcaccttgtatttatttttttaaaaatttaaatagaacattg 10042005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 2135411 - 2135321
Alignment:
Q  5 tatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctttt 95  Q
    |||||| |||| || || |||||||| ||||||| ||||||||| |||||| ||||||||||||||||||| ||||||||| |||| ||||    
T  2135411 tatacgatagtgatgtttacctttggatgtatcgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaatattgttttt 2135321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 40217261 - 40217327
Alignment:
Q  17 attttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatag 83  Q
    ||||||| |||||| ||||||| ||||||||| |||||||||||||||||||||||||| |||||||    
T  40217261 attttcatctttggatgtatcgcatatatacgacaccttatatttatcttttaaaaaatttaaatag 40217327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 39655332 - 39655259
Alignment:
Q  17 attttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||||||||||| || |||||| ||| || || ||||||||||||||||||| ||||||||||||||    
T  39655332 attttcacctttgggtgtaccgcatatatgcggaactttgtatttatcttttaaaaaatttaaatagaacattg 39655259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 36362964 - 36362876
Alignment:
Q  2 atgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||| |||||| |||| ||| ||||||||||| | ||||||||||||| || ||||||||||||||||||| |||| ||| |||||    
T  36362964 atgtatatggtagtgatttccacatttgggtgtattgcatatatacggcactttgtatttatcttttaaaaaatttaaacagagcattg 36362876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 39329484 - 39329397
Alignment:
Q  3 tgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||||||||||   ||||||| |||||||||||||  ||||||||  |||||| ||||||||||||||||||| |||| |||||||||    
T  39329484 tgtatacggtatggattttcatctttgggtgtatcacatatatacaacaccttgtatttatcttttaaaaaatttaaagagaacattg 39329397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 168
Target Start/End: Original strand, 24969716 - 24969776
Alignment:
Q  108 acgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
    |||||||| |||| ||||| |||||||||||||||||||| ||||||||| ||||||||||    
T  24969716 acgttttgtttttatcactagcctcttttcattcccagagtcgagcctccgaattcttagg 24969776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 9578708 - 9578662
Alignment:
Q  51 accttatatttatcttttaaaaaatataaatagaacattgctttttt 97  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||    
T  9578708 accttgtatttatcttttaaaaaatataaatagaacattgctctttt 9578662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 45656188 - 45656277
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||||||||| | || |||||||| ||||| | ||||| ||||||| | ||||||  |||||||||||||||||| |||||| |||||||    
T  45656188 catgtatacgttcgtgattttcacatttggatttatcgcatatatatgacaccttgcatttatcttttaaaaaatttaaataaaacattg 45656277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 82
Target Start/End: Complemental strand, 29425229 - 29425187
Alignment:
Q  40 atatatacggcaccttatatttatcttttaaaaaatataaata 82  Q
    |||||||||||||||||||||||| ||||||||||| ||||||    
T  29425229 atatatacggcaccttatatttattttttaaaaaatttaaata 29425187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 90
Target Start/End: Original strand, 24614022 - 24614055
Alignment:
Q  57 tatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||||||||||| ||||||||||||||    
T  24614022 tatttatcttttaaaaaatttaaatagaacattg 24614055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 90
Target Start/End: Complemental strand, 30507160 - 30507127
Alignment:
Q  57 tatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||||||||||| ||||||||||||||    
T  30507160 tatttatcttttaaaaaatttaaatagaacattg 30507127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 55255282 - 55255314
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtg 33  Q
    |||||||||||||||||||||||||| ||||||    
T  55255282 catgtatacggtagtcattttcacctctgggtg 55255314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 3e-57; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 37168378 - 37168545
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||||||||||| || |  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||       
T  37168378 catgtatacggtagtcattttcacctttgggtataccacatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgtttttttaaa 37168477  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
          |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  37168478 aaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattcttagg 37168545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 44708488 - 44708654
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||       
T  44708488 catgtatacggtagtcattttcacctttgggtgtaccggatatatacggcaccttatatttatcttttaaaaaatataaatagaacatttctttttt-ta 44708586  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
          |||||||||||||| ||||||||||||||||||||||||||  |||||||| ||||||||||    
T  44708587 aaaaaatacgttttgattttatcactggcctcttttcattcccagagttgagcctccgaattcttagg 44708654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 5 - 166
Target Start/End: Complemental strand, 34290727 - 34290566
Alignment:
Q  5 tatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnnnnnn 104  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||           
T  34290727 tatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgtttttttaaaaaaa 34290628  T
Q  105 nntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattctta 166  Q
      |||||||||||||| |||||| | ||||||||||||||||||||||||||| ||||||||    
T  34290627 aatacgttttgattttatcactgacttcttttcattcccagagccgagcctccgaattctta 34290566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 53506979 - 53506802
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctttttt-nn 99  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||       
T  53506979 catgtatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatataaatagaacattgtttttttaaa 53506880  T
Q  100 nnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttaggacgaccctg 177  Q
           || ||||||||||| |||||||||||| ||||||||||||||||||||| | ||||||||||||| |||||    
T  53506879 aaaaaaatatgttttgattttatcactggcctctcttcattcccagagccgagccttcgaattcttaggacggccctg 53506802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 43207332 - 43207167
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||||||||  |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       
T  43207332 catgtatacggtagtcattttcacctttga-tgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctctttt-aa 43207235  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
          |||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43207234 aaaaaatacgtttttaatttatcactggcctcttttcattcccagagccgagcctccaaattcttagg 43207167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 50939328 - 50939162
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||| ||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||       
T  50939328 catgtatacggtagtcatttttacctttgggtgtaccatatatatacggcaccttatatttatcttttaaaaaatataaatagatcattgctttttt-ta 50939230  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
          |||||||||||||| |||||||||||||||||||| |||||||||||| || ||||||||||    
T  50939229 aaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcccccgaattcttagg 50939162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 47467695 - 47467858
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||        
T  47467695 catgtatacggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctctttaaaa 47467794  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
           ||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||    
T  47467795 aaaaaacacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattct 47467858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 2 - 168
Target Start/End: Complemental strand, 54407252 - 54407083
Alignment:
Q  2 atgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg---cttttttn 98  Q
    ||||||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||     
T  54407252 atgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgtttttttttta 54407153  T
Q  99 nnnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
             ||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||||    
T  54407152 aaaaaaaaaacgttttgattttatcaccggcctcttttcattcccagagccgagcctccgaattcttagg 54407083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 38681188 - 38681025
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||||| ||| |||| || ||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||       
T  38681188 catgtatacggtagtcattttcacctctggatgtaccgcatacatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaa 38681089  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          || ||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  38681088 aaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 38681025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 54619298 - 54619135
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||||| |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||       
T  54619298 catgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaa 54619199  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          || ||||||||||| ||| |||| |||||||||| |||||||||||||||| ||||||    
T  54619198 aaaaattatgttttgattttatcattggcttcttttcatttccagagccgagcctccgaattct 54619135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 21582782 - 21582946
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgct-tttttnn 99  Q
    |||||||||||||||||||||||||| |||||||| || |||||||||||||||| |||||||||||||||||||||||||| ||||||| | ||||       
T  21582782 catgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataaaacattgttcttttaaa 21582881  T
Q  100 nnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
           |||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||    
T  21582882 aaaaaaatacgttttgattttatcactggcctcttttcattcccaaagccgagcctccgaattct 21582946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 8073433 - 8073271
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||| |||||||||| || ||||||||| |||||| ||||||||||||||||||||||||||||||||| || ||||       
T  8073433 catgtatacggtagtcattttcacttttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattactctttt-aa 8073335  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          |||||||||||||| |||||| |||||||||||| |||||||||||||||| ||||||    
T  8073334 aaaaaatacgttttgattttatcactgacctcttttcatttccagagccgagcctccgaattct 8073271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 27078664 - 27078500
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctttttt-nn 99  Q
    |||||||||||||||||||||||||| ||||| || || ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||       
T  27078664 catgtatacggtagtcattttcacctctgggtataccgcatatatacggcactttgtatttatcttttaaaaaatataaatagaacattgcttttttaaa 27078565  T
Q  100 nnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
           || ||||||||||| |||||| |||||||||||| |||||||| ||||||| ||||||    
T  27078564 aaaaaattatgttttgattttatcactgacctcttttcatttccagagccaagcctccgaattct 27078500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 27084461 - 27084297
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctttttt-nn 99  Q
    |||||||||||||||||||||||||| ||||| || || ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||       
T  27084461 catgtatacggtagtcattttcacctctgggtataccgcatatatacggcactttgtatttatcttttaaaaaatataaatagaacattgcttttttaaa 27084362  T
Q  100 nnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
           || ||||||||||| |||||| |||||||||||| |||||||| ||||||| ||||||    
T  27084361 aaaaaattatgttttgattttatcactgacctcttttcatttccagagccaagcctccgaattct 27084297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 4 - 164
Target Start/End: Complemental strand, 36716117 - 36715956
Alignment:
Q  4 gtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgct-tttttnnnnn 102  Q
    ||||||||| ||| ||||||||| |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||          
T  36716117 gtatacggtggtcgttttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaataa 36716018  T
Q  103 nnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
        || ||||| ||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  36716017 aaattatgtttttattttatcactggcctcttttcatttccagagccgagcctccgaattct 36715956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 3953991 - 3953829
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||  |||||||||||| |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||| || |||       
T  3953991 catgtatacggttttcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattg-ttcttttaa 3953893  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          ||| |||| ||||| ||||||||||||||||||| ||||||| || ||||| ||||||    
T  3953892 aaaaaatacattttaattttatcactggcctcttttcatttccagagcggaacctccgaattct 3953829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 42098812 - 42098975
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||||| || || || || |||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||       
T  42098812 catgtatacggtagtcattttcacctctgagtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttttaaa 42098911  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
           || |||||||||| ||||||||||||||||||| || |||| |||||| | ||||||    
T  42098912 aaaaaagacattttgattttatcactggcctcttttcatttcccgagctgagccttcgaattct 42098975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 53149409 - 53149246
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||| | || || ||||| || |||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||       
T  53149409 catgtatacggtagtcatttttatctctgagtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttttaaa 53149310  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
           ||||||||||||| ||||||| |||||||||||||| || | |||||||| ||||||    
T  53149309 aaaaaaaacgttttgattttatcactggtctcttttcattccccgaactgagcctccgaattct 53149246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 2 - 97
Target Start/End: Complemental strand, 9878781 - 9878686
Alignment:
Q  2 atgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctttttt 97  Q
    ||||||||| |||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  9878781 atgtatacgatagtcattttcacctttgggtgtaccgcatatatactgcaccttatatttatcttttaaaaaatataaatagaatattgctctttt 9878686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 18372490 - 18372656
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcga----atatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttt 96  Q
    |||||||||||||||||||||||||| || ||||| ||     ||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||    
T  18372490 catgtatacggtagtcattttcacctctgtgtgtaccgcgcgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttt 18372589  T
Q  97 tnnnnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
    |         |||||||||||||| |||||| ||||||||||||||||| | ||||||||| ||||||    
T  18372590 t-aaaaaaaatacgttttgattttatcactgacctcttttcattcccagtgtcgagcctccgaattct 18372656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 36605976 - 36606136
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatc-ttttaaaaaatataaatagaacattgcttttttnn 99  Q
    ||||||||||||||| ||||||| || |||||||| || |||||||||||||||| |||||||| |||||||||||||||||||||||||||| | ||      
T  36605976 catgtatacggtagt-attttcatctctgggtgtaccgcatatatacggcaccttgtatttatctttttaaaaaatataaatagaacattgctctatt-a 36606073  T
Q  100 nnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaatt 162  Q
           |||||||||||||| |||||| |||||||||||| |||||||||| ||||| ||||    
T  36606074 aaaaaaatacgttttgattttatcactgacctcttttcatttccagagccgaacctccgaatt 36606136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 12 - 169
Target Start/End: Complemental strand, 50258708 - 50258551
Alignment:
Q  12 tagtcattttcaccttt-gggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnnnnnnnntacg 110  Q
    |||||||||||||| |  ||||||| || ||||||||| |||||| ||||||| |||||||||||||||||||||||| ||| ||||         || |    
T  50258708 tagtcattttcaccctccgggtgtaccgcatatatacgacaccttgtatttattttttaaaaaatataaatagaacatcgctctttt-taaaaaaatatg 50258610  T
Q  111 ttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagga 169  Q
    |||||||||| ||||||  |||||||| ||||||||||||||||||| |||||| ||||    
T  50258609 ttttgattttatcactgatctcttttcgttcccagagccgagcctccgaattctcagga 50258551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 28689456 - 28689368
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacatt 89  Q
    ||||||||||| ||| |||||||||||||| | ||||| |||||||||||||||| ||||||||||||  ||||| |||||||||||||    
T  28689456 catgtatacggcagtgattttcacctttggatatatcgcatatatacggcaccttgtatttatctttttgaaaatttaaatagaacatt 28689368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 48157150 - 48157306
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||| ||||||||||||||||||||||||| ||           ||||||||||||||||||||||||||||||||||| |||||| |||||       
T  48157150 catgtatacagtagtcattttcacctttgggtgtaccgc----------caccttatatttatcttttaaaaaatataaatagatcattgcattttt-tt 48157238  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
          |  ||||||||||| ||||||||||||||| |||||| || |||||||||| ||||||||||    
T  48157239 taaaaatgtgttttgattttatcactggcctctttttattcccggaaccgagcctccgaattcttagg 48157306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 26279563 - 26279642
Alignment:
Q  11 gtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||| ||||||| |||||||||||| | ||||||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  26279563 gtagtgattttcatctttgggtgtattgcatatatacgacaccttctatttatcttttaaaaaatttaaatagaacattg 26279642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 8420341 - 8420425
Alignment:
Q  5 tatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacatt 89  Q
    ||||||| ||| |||||||| ||||||||||    |||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  8420341 tatacggcagtgattttcacatttgggtgtacaacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacatt 8420425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 32319239 - 32319162
Alignment:
Q  12 tagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacatt 89  Q
    |||| ||||||||||||||||||| || ||||||||  ||| || ||||||||||||||||||| |||||||||||||    
T  32319239 tagtaattttcacctttgggtgtaccgcatatatacaacactttgtatttatcttttaaaaaatttaaatagaacatt 32319162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 48720500 - 48720439
Alignment:
Q  107 tacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
    |||||||||||||| |||||  ||||||||||||||||||||||||||||| ||||||||||    
T  48720500 tacgttttgattttatcacttacctcttttcattcccagagccgagcctcccaattcttagg 48720439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 49393101 - 49393189
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||||||| ||||| ||||||||||||| |  ||||||||| | |||| ||||||||||||||||||| |||| |||||||||    
T  49393101 catgtatacggtagtaatttttacctttgggtgta-cacatatatacgacgccttgtatttatcttttaaaaaatttaaagagaacattg 49393189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 54574922 - 54574833
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||||||| |||||| ||||| || |||||||||| || |||||||||| ||||| ||||||| |||| |||||| ||||||||||||||    
T  54574922 catgtatatggtagtgatttttacttttgggtgtaccgcatatatacggtaccttgtatttatattttgaaaaatttaaatagaacattg 54574833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 21 - 90
Target Start/End: Original strand, 42453435 - 42453504
Alignment:
Q  21 tcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||||||| ||||||||| ||||||| | |||||| ||||||||||||||||||| ||||| ||||||||    
T  42453435 tcacctttaggtgtatcgcatatatatgacaccttgtatttatcttttaaaaaatttaaattgaacattg 42453504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 25855435 - 25855521
Alignment:
Q  3 tgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||||| ||||||| ||||||||| |    ||||||||| |||||| |||| |||||||||||||| ||||||||||||||    
T  25855435 tgtatacggtagtgattttcaactttgggtgcactacatatatacgacaccttgtatt-atcttttaaaaaatttaaatagaacattg 25855521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 29620426 - 29620378
Alignment:
Q  116 attttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
    ||||| |||||| ||||||||||||||||||||||||||||| ||||||    
T  29620426 attttatcactgacctcttttcattcccagagccgagcctccgaattct 29620378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29620483 - 29620423
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatattt 61  Q
    |||||||||||||||||||||||||| ||| | || || |||||||||||||||| |||||    
T  29620483 catgtatacggtagtcattttcacctctggatataccgcatatatacggcaccttgtattt 29620423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 23641374 - 23641329
Alignment:
Q  40 atatatacggcaccttatatttatcttttaaaaaatataaatagaa 85  Q
    ||||||||| ||| || |||||||||||||||||||||||||||||    
T  23641374 atatatacgacacattgtatttatcttttaaaaaatataaatagaa 23641329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 52374667 - 52374756
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||||||| |||||| ||||| | ||||||| || |||||| ||| || ||||||| |   ||||||| ||||||||||||||    
T  52374667 catgtatacggtagtgattttctcctttagatgtatcgcatctatacgacacattgtatttatttaaaaaaaaatttaaatagaacattg 52374756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 789947 - 790036
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||||||| ||| || ||||| |||||||||||||    ||||||| | |||||| |||||||  |||||||||| ||||||||| ||||    
T  789947 catgtatatggtggtgatttttacctttgggtgtacaacatatatatgacaccttgtatttattgtttaaaaaatttaaatagaagattg 790036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 3e-54; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 23606724 - 23606558
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||       
T  23606724 catgtatacggtagtcatttttacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctctttt-aa 23606626  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
          |||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||    
T  23606625 aaaaaatacgttttgattttatcactggtctcttttcattcccagagccgagcctccgaattcttagg 23606558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 10917399 - 10917563
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||       
T  10917399 catgtataaggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagatcattg-tttttttta 10917497  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattctta 166  Q
          |||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||    
T  10917498 aaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattctta 10917563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 23798356 - 23798189
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||        
T  23798356 catgtatacggtagtcattttcacttttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctctttaaaa 23798257  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
          |||||||||||||| ||| || ||||||||| ||||||||||||||||||| ||||||||||    
T  23798256 aaaatatacgttttgattttatcattgacctcttttcgttcccagagccgagcctccgaattcttagg 23798189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 42600790 - 42600957
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||       
T  42600790 catgtatacggtagtcattttcacctttgggtgtaccacatatatacggcaccttatatttatcttttaaaaaatataaatagatcattgcttttttaaa 42600889  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
           ||||||||||||| |||||| ||||||||||||  ||||||||||||||| ||||||||||    
T  42600890 aaaaaaaacgttttgattttatcactgacctcttttcattttcagagccgagcctccgaattcttagg 42600957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 45475825 - 45475987
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||||| |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||       
T  45475825 catgtatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt-aa 45475923  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          |||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||    
T  45475924 aaaaaatacgttttgattttatcactggcctcttttcattccccgagccgagcctccgaattct 45475987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 13534781 - 13534622
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||||| |||||||| || |||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||       
T  13534781 catgtatacggtagtcattttcacctctgggtgtaccgcatatatacggca-cttgtatttatcttttaaaaaatataaatagaacattgctctttt-aa 13534684  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaatt 162  Q
          |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  13534683 aaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaatt 13534622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 13624321 - 13624162
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||||| |||||||| || |||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||       
T  13624321 catgtatacggtagtcattttcacctctgggtgtaccgcatatatacggca-cttgtatttatcttttaaaaaatataaatagaacattgctctttt-aa 13624224  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaatt 162  Q
          |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  13624223 aaaaaatacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaatt 13624162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 37430253 - 37430090
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||| |||| | |||||| || |||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||       
T  37430253 catgtatacggtagtcatttttacctctaggtgtaacgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttttaaa 37430154  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
           ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  37430153 aaaaaaaacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattct 37430090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 30883337 - 30883493
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgct-tttttnn 99  Q
    |||||||||||||||||||||||||| |||||||| || ||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||       
T  30883337 catgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcacattgtatttatcttttaaaaaatataaatagaacattgctcttttaaa 30883436  T
Q  100 nnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctc 156  Q
           || ||||||||||| ||||||||||||||||||| |||||||||||||||    
T  30883437 aaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctc 30883493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 2952316 - 2952151
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg--cttttttn 98  Q
    ||||||||||||||||||||||| || |||||||| || ||||||||||||| || ||||||||||||||||||||||||||||||||||  ||||||      
T  2952316 catgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcactttgtatttatcttttaaaaaatataaatagaacattgctctttttaa 2952217  T
Q  99 nnnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
            || ||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  2952216 aaaaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 2952151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 3048610 - 3048449
Alignment:
Q  3 tgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnnnn 102  Q
    ||||||||||||||||||||| || | |||||| || |||||||||||||||| ||||||||||||||||||||||||||| | |||||| ||||         
T  3048610 tgtatacggtagtcattttcatctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagtatattgctcttttaaaaa 3048511  T
Q  103 nnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
        || ||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  3048510 aaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 3048449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 5860839 - 5860674
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttt--tn 98  Q
    |||||||| ||||||||||||||||| |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||        
T  5860839 catgtatatggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttaaaa 5860740  T
Q  99 nnnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
            || ||||||||||| ||| || |||||||||||| |||||||||||||||||||||||    
T  5860739 ataaatattatgttttgattttatcattgacctcttttcatttccagagccgagcctccaaattct 5860674  T

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Target: chr8; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 41879189 - 41879350
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||| |||||||||||||||||||||| |||| || |||||||||| ||||| |||||||||||||||||||||||||||||||||| | ||||       
T  41879189 catgtattcggtagtcattttcacctttggatgtaccgcatatatacggtaccttgtatttatcttttaaaaaatataaatagaacattgttctttt--a 41879286  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          |||||||| ||||| |||||  ||||||||||||||||||||||||||| | ||||||    
T  41879287 aaaaaatacgttttaattttatcactaacctcttttcattcccagagccgagccttcgaattct 41879350  T

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Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 15167510 - 15167421
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||||||||| |||| |||||||| ||||||||||||| ||||||||  ||| |||||||||||||||||||||| ||||||||||||||    
T  15167510 catgtatacgatagtgattttcacatttgggtgtatcgcatatatacaacactttatatttatcttttaaaaaatttaaatagaacattg 15167421  T

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Target: chr8; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 15078766 - 15078854
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacatt 89  Q
    |||||||||| |||| |||||||| ||||||||||| | |||||||| ||||||||||||||||||||||||| | |||||||||||||    
T  15078766 catgtatacgatagtgattttcacatttgggtgtatagcatatatacagcaccttatatttatcttttaaaaattttaaatagaacatt 15078854  T

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Target: chr8; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 7944617 - 7944528
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||||||| |||||||||||||||||||    |||||||||||||||| ||||||| ||||||||||| |||||| |||||||    
T  7944617 catgtatacggtagtgattttcacctttgggtgtacaacatatatacggcaccttgtatttattttttaaaaaatttaaataaaacattg 7944528  T

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Target: chr8; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 30674482 - 30674409
Alignment:
Q  17 attttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||| || ||||||||||||||    
T  30674482 attttcacctttgagtgtatcgcatatatacgacaccttatatttatcttttaaaacatttaaatagaacattg 30674409  T

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Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 5721570 - 5721654
Alignment:
Q  4 gtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacat 88  Q
    |||||||||||| |||||||| |||||||||| ||| |||||| |||||||| ||||||||||||||||||  ||||||||||||    
T  5721570 gtatacggtagtgattttcacttttgggtgtaccgattatatagggcaccttgtatttatcttttaaaaaaattaaatagaacat 5721654  T

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Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 8102920 - 8103008
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacatt 89  Q
    ||||||||||||| | |||||||||||| |||||| || |||||||| ||||||| ||||||||||||||||||| |||||| ||||||    
T  8102920 catgtatacggtaatgattttcacctttaggtgtaccgcatatatactgcaccttgtatttatcttttaaaaaatttaaatataacatt 8103008  T

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Target: chr8; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 41677269 - 41677100
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaa-aaaatataaatagaacattgcttttttnn 99  Q
    ||||||||| ||||| |||||||||||| | ||||||| ||||||||| || ||| |||||||||||||| ||||| |||||||||||||| | ||||      
T  41677269 catgtatacagtagtgattttcacctttagatgtatcgcatatatacgacatcttgtatttatcttttaaaaaaatttaaatagaacattgttcttttaa 41677170  T
Q  100 nnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagga 169  Q
           |||||||| ||||| | |  || ||||||||| || ||||||||||||||| ||||| |||||    
T  41677169 aaaaaaatacgtttttattttattataggtctcttttcactcacagagccgagcctccgaattcgtagga 41677100  T

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Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 11290192 - 11290281
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||||||| ||||||||||||| |||||    ||||||||| |||||| ||||||||||||||||||| |||||| |||||||    
T  11290192 catgtatacggtagtgattttcacctttgagtgtacaacatatatacgacaccttgtatttatcttttaaaaaatttaaataaaacattg 11290281  T

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Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 164
Target Start/End: Complemental strand, 20003799 - 20003742
Alignment:
Q  107 tacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  20003799 tacgttttgattttatcactggcctcttttcattccccgagccgagcctccaaattct 20003742  T

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Target: chr8; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 8646215 - 8646302
Alignment:
Q  2 atgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||||||||||||| |||||||| |||| |||||| | |||||||||  ||||| ||||||||||||||||||| ||||||||||||||    
T  8646215 atgtatacggtagtgattttcacatttgcgtgtat-gcatatatacgataccttgtatttatcttttaaaaaatttaaatagaacattg 8646302  T

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Target: chr8; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 5942704 - 5942777
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaa 74  Q
    ||||||||||||||| ||||||||||||||||||| || | ||||||| || ||| ||||||||||||||||||    
T  5942704 catgtatacggtagtgattttcacctttgggtgtaccgcacatatacgacatcttgtatttatcttttaaaaaa 5942777  T

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Target: chr8; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 39332500 - 39332411
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||||||| |||||||||||||| |||| ||  |||||| | |||||| |||||||||||| |||||  ||||||||||||||    
T  39332500 catgtatacggtagtgattttcacctttggatgtaccgcttatatatgacaccttgtatttatctttttaaaaaattaaatagaacattg 39332411  T

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Target: chr8; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 25561588 - 25561502
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacatt 89  Q
    ||||||||||| ||| |||||||| ||||||| ||||| |||||||||||||||| |||||||| ||||||| || |||||||||||||    
T  25561588 catgtatacggcagtgattttcacatttgggt-tatcgcatatatacggcaccttgtatttatc-tttaaaagatttaaatagaacatt 25561502  T

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Target: chr8; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 5973200 - 5973113
Alignment:
Q  3 tgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||| | ||||||| || ||||||||    ||||||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  5973200 tgtatacggtaatgattttcatctatgggtgtacaacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattg 5973113  T

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Target: chr8; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 14510077 - 14509989
Alignment:
Q  1 catgtatacggtagtcatttt-cacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||||||| ||||| ||| |||||||||| ||  |||||||| |||||||||||| ||||||||||||| ||||| ||||||||    
T  14510077 catgtatacggtagtgatttttcacatttgggtgtaccg--tatatacgacaccttatatttgtcttttaaaaaatttaaattgaacattg 14509989  T

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Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 34789957 - 34789870
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacat 88  Q
    ||||||||||||||| |||||||||||||||||||    ||||||||| || ||| |||||||||||||| | || ||||||||||||    
T  34789957 catgtatacggtagtgattttcacctttgggtgtacaacatatatacgacatcttgtatttatcttttaagagatttaaatagaacat 34789870  T

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Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 23941170 - 23941097
Alignment:
Q  17 attttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||| ||||||||||||||  |||||| | |||||| ||||||||||||||||||| |||||| |||||||    
T  23941170 attttcatctttgggtgtatcgcttatatatgacaccttgtatttatcttttaaaaaatttaaataaaacattg 23941097  T

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Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 34048802 - 34048711
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatata--cggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||| ||||| ||||||| |||||||||||||  |||||||  || ||| || ||||||||||||||||  | ||||||||||||||    
T  34048802 catgtatacagtagtgattttcatctttgggtgtatcatatatatatacgacacattgtatttatcttttaaaatgtttaaatagaacattg 34048711  T

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Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 90
Target Start/End: Original strand, 9108551 - 9108590
Alignment:
Q  51 accttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||| ||||||||||||||||||| ||||||||||||||    
T  9108551 accttgtatttatcttttaaaaaatttaaatagaacattg 9108590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 89
Target Start/End: Complemental strand, 34868223 - 34868184
Alignment:
Q  50 caccttatatttatcttttaaaaaatataaatagaacatt 89  Q
    |||||| ||||||||||||||||||| |||||||||||||    
T  34868223 caccttgtatttatcttttaaaaaatttaaatagaacatt 34868184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 38009203 - 38009158
Alignment:
Q  45 tacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||| ||| |||||||||||||||||||| | ||||||||||||||    
T  38009203 tacgacacgttatatttatcttttaaaaattttaaatagaacattg 38009158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 2e-49; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 24410444 - 24410613
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttt--tn 98  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||        
T  24410444 catgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgttttttaaaa 24410543  T
Q  99 nnnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
            |||||||||||||| ||||||||||||||||||||||| | |||||||||| ||||||||||    
T  24410544 aaaaaaaatacgttttgattttatcactggcctcttttcattcccaaaaccgagcctccgaattcttagg 24410613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 27506835 - 27506669
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||| ||||||||||| ||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||       
T  27506835 catgtatacagtagtcatttttacctttgggtgtaccacatatatacggcaccttatatttatcttttaaaaaatataaatagatcattgctttttt-tt 27506737  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
          |||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||    
T  27506736 aaaaaatacgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagg 27506669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 4505901 - 4506064
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||| |||| |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||       
T  4505901 catgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaa 4506000  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          || ||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  4506001 aaaaattatgttttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 4506064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 10762660 - 10762495
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||||||||||||||||| |  |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||        
T  10762660 catgtatacggtagtcattttcacctttgggtgtaccacatatataccgcaccttatatttatcttttaaaaaatataaatagaacattgctcttt--aa 10762563  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
           ||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  10762562 aaaaaaaacgttttaattttatcactggcctcttttcattcccagagctgagcctccaaattcttagg 10762495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 26716135 - 26716303
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatctttt-aaaaaatataaatagaacattgcttttttnn 99  Q
    ||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||      
T  26716135 catgtatacggtagtcattttcacctttgggtgtaccgcatatatatggcaccttatatttatcttttaaaaaaatataaatagaacattgctcttttaa 26716234  T
Q  100 nnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
           |||||||||||||| |||||| |||||||||||||||| |||||||||  | ||||||||||    
T  26716235 aaaaaaatacgttttgattttatcactgacctcttttcattcccaaagccgagccaacgaattcttagg 26716303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 6965014 - 6965175
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||||| |||||||| || ||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||       
T  6965014 catgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcactttgtatttatcttttaaaaaatataaatagaacattgctcttttaaa 6965113  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          ||  |||||||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  6965114 aaaaatta--ttttgattttatcactggcctcttttcatttccagagccgagcctccgaattct 6965175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 9046036 - 9046189
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatctttt-aaaaaatataaatagaacattgcttttttnn 99  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||      
T  9046036 catgtatacggtagtcattttcacctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaaatataaatagaacattg-ttctttta 9046134  T
Q  100 nnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcc 154  Q
           |||||||||||||| ||||||||||||||| ||||||||||| |||||    
T  9046135 aaaacaatacgttttgattttatcactggcctcttttaattcccagagctgagcc 9046189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 29939957 - 29939795
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||| |||||| |||||||||| ||||||||||||||||||||||||| ||||       
T  29939957 catgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttgtatttatcttgtaaaaaatataaatagaacattgctctttt-aa 29939859  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          |||||||||||||| |||||| |||||||| |||||||||||||||||| | ||||||    
T  29939858 aaaaaatacgttttgattttatcactgacctctttttattcccagagccgagccttcgaattct 29939795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 8907174 - 8907005
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgct-tttttnn 99  Q
    ||||||||||||||||||||| |||| |||||||| || ||||||||||| |||| ||||||||||||||||||||||||||||||||| || ||||       
T  8907174 catgtatacggtagtcatttttacctctgggtgtaccgcatatatacggcgccttgtatttatcttttaaaaaatataaatagaacattactcttttaaa 8907075  T
Q  100 nnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagga 169  Q
           || ||||||||||| |||||||||||||||||||  ||||||||||||||| |||||| ||||    
T  8907074 aaaaaattatgttttgattttatcactggcctcttttcattttcagagccgagcctccgaattctcagga 8907005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 3155224 - 3155387
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||||| | |||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||       
T  3155224 catgtatacggtagtcattttcacctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaa 3155323  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          || ||||| ||||| |||||| ||||||||||||   | |||||||||||| ||||||    
T  3155324 aaaaattatgttttaattttatcactgacctcttttcatttttaaagccgagcctccgaattct 3155387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 12337543 - 12337379
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgct-tttttnn 99  Q
    |||||||||||||||||||||||||| |||||||| |  ||||||| | |||||| |||||||||||||||||||||||||||||||||||| ||||       
T  12337543 catgtatacggtagtcattttcacctctgggtgtaccacatatatatgacaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaa 12337444  T
Q  100 nnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
           ||  |||||||||| ||||||||||||||||||| |||||||||||||| | ||||||    
T  12337443 aaaaaattatattttgattttatcactggcctcttttcatttccagagccgagccttcgaattct 12337379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 40636164 - 40636307
Alignment:
Q  20 ttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnnnnnnnntacgttttgattt 119  Q
    ||||||| |||||||| || ||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||         || ||||||||||    
T  40636164 ttcacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctctttt-aaaaaaaatatgttttgattt 40636262  T
Q  120 tttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
    | ||||||||||||||||||||||||||| |||||||| ||||||    
T  40636263 tatcactggcctcttttcattcccagagctgagcctccgaattct 40636307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 3953013 - 3953188
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||| |||||||| |||||||||||| |||||||| || || ||||||||||||| |||||||||||||||||||||||||||||||| | | |||        
T  3953013 catgcatacggtaatcattttcacctctgggtgtaccgcatgtatacggcaccttgtatttatcttttaaaaaatataaatagaacatcggtcttt--aa 3953110  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattctta-ggacgaccctg 177  Q
          ||| |||||||||| |||||| |||||||||||| ||| ||||||||||||||||||| | |||||||||||    
T  3953111 aaaaaatacattttgattttatcactgacctcttttcatttccaaagccgagcctccaaattctcagggacgaccctg 3953188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 164
Target Start/End: Original strand, 34693991 - 34694144
Alignment:
Q  10 ggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnnnnnnnntac 109  Q
    |||||||||||| |||| |||||||| |  |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||         |||    
T  34693991 ggtagtcattttgacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt-aaaaaaaatac 34694089  T
Q  110 gttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
    ||||||||||| |||| |||||||||||||| ||||| |||| ||||| ||||||    
T  34694090 gttttgattttatcacgggcctcttttcatttccagatccgaacctccgaattct 34694144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 164
Target Start/End: Original strand, 34716403 - 34716556
Alignment:
Q  10 ggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnnnnnnnntac 109  Q
    |||||||||||| |||| |||||||| |  |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||         |||    
T  34716403 ggtagtcattttgacctctgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt-aaaaaaaatac 34716501  T
Q  110 gttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
    ||||||||||| |||| |||||||||||||| ||||| |||| ||||| ||||||    
T  34716502 gttttgattttatcacgggcctcttttcatttccagatccgaacctccgaattct 34716556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 5 - 155
Target Start/End: Original strand, 7162795 - 7162944
Alignment:
Q  5 tatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnnnnnn 104  Q
    |||||||||||||||||||||| || || || || |||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||           
T  7162795 tatacggtagtcattttcacctctgagtataccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttttaaaaaaa 7162894  T
Q  105 nntacgttttgattttttcactggcctcttttcattcccagagccgagcct 155  Q
       || |||| ||||| |||||||||||||||||||||| |||| ||||||    
T  7162895 ag-acattttaattttatcactggcctcttttcattccccgagctgagcct 7162944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 24035640 - 24035551
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||| ||||||| |||||||||||| ||||||||| || ||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  24035640 catgtatgcggtagtgattttcacctttaggtgtatcgcatttatacggcaccttgtatttatcttttaaaaaatttaaatagaacattg 24035551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 11 - 90
Target Start/End: Complemental strand, 13800630 - 13800550
Alignment:
Q  11 gtagtcattttcaccttt-gggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13800630 gtagtgattttcaccttttgggtgtatcgcatatatacggcaccttatatttatcttttaaaaaatttaaatagaacattg 13800550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 164
Target Start/End: Complemental strand, 5952791 - 5952650
Alignment:
Q  20 ttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnnnnnnnntacgttttgattt 119  Q
    ||||||| |||||||| || |||||||||||||||| |||||||||||||||||  ||||||| ||||||||| ||||         |||||||||||||    
T  5952791 ttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaa--ataaatataacattgctctttt-aaaaaaaatacgttttgattt 5952695  T
Q  120 tttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
    | ||| ||||||||||||||||| |||||||| ||||| ||||||    
T  5952694 tatcattggcctcttttcattccgagagccgaacctccgaattct 5952650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 16097015 - 16097104
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||||||| |||||| |||||||||||||||||||    |||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  16097015 catgtataaggtagtaattttcacctttgggtgtacatcatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattg 16097104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 38400805 - 38400894
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||||||| |||||||||||||  ||||||| ||||||| | |||||| ||||||||||||||||||| ||||||||||||||    
T  38400805 catgtatacggtagtgattttcacctttgaatgtatcgcatatatatgacaccttgtatttatcttttaaaaaatttaaatagaacattg 38400894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 12134134 - 12134046
Alignment:
Q  2 atgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||||||||||||| |||||||| ||||||||||||| |||||||||| ||||| |||||||||||||||   | ||||||||||||||    
T  12134134 atgtatacggtagtgattttcacttttgggtgtatcgcatatatacggtaccttgtatttatcttttaaattttttaaatagaacattg 12134046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 168
Target Start/End: Original strand, 8327674 - 8327791
Alignment:
Q  50 caccttatatttatcttttaaaaaatataaatagaacattgcttttttnnnnnnnnntacgttttgattttttcactggcctcttttcattcccagagcc 149  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||         |||||||||||||| ||||||  ||||||||||| ||||| |     
T  8327674 caccttatatttatcttttaaaaaatataaatagatcattgctttttt-aaaaaaaatacgttttgattttatcactgatctcttttcatttccagaact 8327772  T
Q  150 gagcctccaaattcttagg 168  Q
    |||||||| |||| |||||    
T  8327773 gagcctccgaatttttagg 8327791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 21665795 - 21665706
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||||||| |||||||| ||| | ||||||  ||||||||| |||| | ||||||||||||||||||| ||||||||||||||    
T  21665795 catgtatacggtagtgattttcacattttgatgtatcacatatatacgacaccgtgtatttatcttttaaaaaatttaaatagaacattg 21665706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 65 - 164
Target Start/End: Complemental strand, 1396730 - 1396631
Alignment:
Q  65 ttttaaaaaatataaatagaacattgcttttttnnnnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
    |||||||||||||||||||||||||||| ||||         || ||||||||||| ||||||||||||||||||| |||||| ||||||||| ||||||    
T  1396730 ttttaaaaaatataaatagaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcatttccagagtcgagcctccgaattct 1396631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 28425801 - 28425716
Alignment:
Q  5 tatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||| |||||| |||||||| ||||||||||  | ||||||||| |||||| ||||||||||||||||  | ||||||||||||||    
T  28425801 tatatggtagtgattttcacatttgggtgtactgcatatatacgacaccttgtatttatcttttaaaatttttaaatagaacattg 28425716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 11912851 - 11912763
Alignment:
Q  2 atgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||||||||||||| ||||||| |||||| ||||| | ||||||||||||| || ||||||| ||||   |||| ||||||||||||||    
T  11912851 atgtatacggtagtgattttcatctttggatgtattgcatatatacggcactttgtatttatttttttttaaatttaaatagaacattg 11912763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 16227462 - 16227374
Alignment:
Q  2 atgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||||||  ||||| ||||||| || | ||||||||  ||||||||| |||||| ||||||||||||||||||| ||||||||| ||||    
T  16227462 atgtatatagtagtgattttcatctatcggtgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaaaattg 16227374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 7742229 - 7742139
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaa-aaaatataaatagaacattg 90  Q
    |||| ||||| ||||  ||||||||||||| |||| || ||||||| | ||| || |||||||||||||| ||||||||||||||||||||    
T  7742229 catgcatacgatagtatttttcacctttggatgtaacgcatatatatgacacattgtatttatcttttaaaaaaatataaatagaacattg 7742139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 37182677 - 37182739
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttat 63  Q
    ||||||||||||||| |||||||| ||||||||||| | ||||||||| |||||| |||||||    
T  37182677 catgtatacggtagtgattttcacttttgggtgtattgcatatatacgacaccttgtatttat 37182739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 42029168 - 42029241
Alignment:
Q  17 attttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||||||||||| ||||||    || |||| | |||||||||||||||||||||||||| ||||||||||||||    
T  42029168 attttcacctttaggtgtacaacatgtatatgacaccttatatttatcttttaaaaaatttaaatagaacattg 42029241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 10252437 - 10252511
Alignment:
Q  18 ttttcacctttgggtgtatcgaatatatacggc---accttatatttatcttttaaaaaatataaatagaacatt 89  Q
    ||||||||||||||||| | | ||||||||| |   ||||| ||||||||||||||||||| ||||| |||||||    
T  10252437 ttttcacctttgggtgtgtagtatatatacgacgacaccttgtatttatcttttaaaaaatttaaattgaacatt 10252511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 22727597 - 22727530
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatctttt 68  Q
    |||||||| |||||| |||||||| |||||||||| || ||||||||| ||| |  ||||||||||||    
T  22727597 catgtatatggtagtgattttcacttttgggtgtaccgcatatatacgtcacatagtatttatctttt 22727530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 90
Target Start/End: Complemental strand, 22727496 - 22727463
Alignment:
Q  57 tatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||||||||||| ||||||||||||||    
T  22727496 tatttatcttttaaaaaatttaaatagaacattg 22727463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 2e-49; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 17168975 - 17169141
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||| |||||||||||||||||||||||||| || ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||       
T  17168975 catgtatatggtagtcattttcacctttgggtgtaccgcatatatacaacaccttatatttatcttttaaaaaatataaatagaacattgctttttt-ta 17169073  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
          |||||||||||||| |||||| |||||||||||| |||||||||||||||| ||||||||||    
T  17169074 aaaaaatacgttttgattttatcactgacctcttttcatttccagagccgagcctccgaattcttagg 17169141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 9173117 - 9172950
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||        
T  9173117 catgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgttttttaaaa 9173018  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
          ||| |||| | ||| |||| ||||||||||||||||||||||||||||||| ||||||||||    
T  9173017 caaaaatacatttttaatttatcaccggcctcttttcattcccagagccgagcctccgaattcttagg 9172950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 9181099 - 9180932
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||        
T  9181099 catgtatacggtagtcattttcacctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgttttttaaaa 9181000  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
          ||| |||| | ||| |||| ||||||||||||||||||||||||||||||| ||||||||||    
T  9180999 caaaaatacatttttaatttatcaccggcctcttttcattcccagagccgagcctccgaattcttagg 9180932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 5 - 168
Target Start/End: Original strand, 19955740 - 19955902
Alignment:
Q  5 tatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnnnnnn 104  Q
    ||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||| |||||| |||||           
T  19955740 tatacggtagtcattttcacctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatataaatagatcattgc-tttttaaaaaaa 19955838  T
Q  105 nntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
      | |||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||    
T  19955839 aattcgttttgattttatcactggcctcttttcattctcagagccgagcctccgaattcttagg 19955902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 40501884 - 40501717
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||| ||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||       
T  40501884 catgtatacggtagtcatttttacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagatcattacttttttttt 40501785  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
          |||||||||||||| |||||| ||||||||||||| ||||| ||||||||| ||||||||||    
T  40501784 aaaaaatacgttttgattttatcactgacctcttttcattctcagagtcgagcctccgaattcttagg 40501717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 23185446 - 23185613
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||||| |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||       
T  23185446 catgtatacggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt-aa 23185544  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagga 169  Q
          |||||||||||||| ||||||||||||||||| |||  ||||||||||||| |||||| ||||    
T  23185545 aaaaaatacgttttgattttatcactggcctcttttcaatcctcgagccgagcctccgaattctcagga 23185613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 14146319 - 14146481
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||||| || |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||       
T  14146319 catgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctctttt-aa 14146417  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          |||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||    
T  14146418 aaaaaatacgttttgattttatcactggcctcttttcattccaagagccgagcctccgaattct 14146481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 51607534 - 51607368
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacgg-caccttatatttatcttttaaaaaatataaatagaacattgcttttttnn 99  Q
    |||||||||||||||||||||||| |||||||||| || |||||||||| ||||||||||||||||||||||||||||||||| ||||||  ||||||      
T  51607534 catgtatacggtagtcattttcacgtttgggtgtaccgcatatatacggccaccttatatttatcttttaaaaaatataaataaaacatt--tttttttt 51607437  T
Q  100 nnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
           |||||||||||||| |||||| ||||||||||||||||||||||||||||| |||| |||||    
T  51607436 aaaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaatttttagg 51607368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 5316699 - 5316861
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||||| |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||       
T  5316699 catgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctctttt-aa 5316797  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          |||||||||||||| |||||| |||||||||||||| |  | ||||||||||||||||    
T  5316798 aaaaaatacgttttgattttatcactgacctcttttcattcctaaggtcgagcctccaaattct 5316861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 1366970 - 1366812
Alignment:
Q  3 tgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnnnn 102  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||         
T  1366970 tgtatacggtagtcattttcatctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgc--tcttaaaaa 1366873  T
Q  103 nnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattc 163  Q
        || ||||| | ||| ||||||||||||||||||||||||||| ||||||||||||||    
T  1366872 aaaatatgttttcaatttatcactggcctcttttcattcccagagctgagcctccaaattc 1366812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 164
Target Start/End: Original strand, 5027572 - 5027732
Alignment:
Q  5 tatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgct-tttttnnnnnn 103  Q
    |||| ||||||||||||||||| |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||           
T  5027572 tatatggtagtcattttcacctatgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgctcttttaaaaaaa 5027671  T
Q  104 nnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
       |||||||||||||| |||||||||||||||||||||| ||| ||||||||| ||||||    
T  5027672 aaatacgttttgattttatcactggcctcttttcattccccgagtcgagcctccgaattct 5027732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 6771812 - 6771975
Alignment:
Q  3 tgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttt--tnnn 100  Q
    |||||||||||||||||||||||| |||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||          
T  6771812 tgtatacggtagtcattttcacctctgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctctttaaaaaa 6771911  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
           ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  6771912 aaaaaacacgttttgattttatcactggcctcttttcattcccagagccgagcctccgaattct 6771975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 21741029 - 21740866
Alignment:
Q  3 tgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctttttt--nnn 100  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||         
T  21741029 tgtatatggtagtcattttcacctctgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaatacaaatagaacattgctcttttaaaaa 21740930  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          ||| |||||||||| |||||||||||||||||||| ||||||||||||||| ||||||    
T  21740929 aaaaaatacattttgattttatcactggcctcttttcattctcagagccgagcctccgaattct 21740866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 27559656 - 27559752
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctttttt 97  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27559656 catgtatacggtagtcattttcacctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacattgctttttt 27559752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 44655760 - 44655922
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||| |||| |||||||| || ||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||       
T  44655760 catgtatacggtagtcatttttacctctgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctctttt-aa 44655858  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          || ||||||||||| ||||||| ||||||||||| |||||||||||||||| ||||||    
T  44655859 aaaaattatgttttgattttatcactggtctcttttcatttccagagccgagcctccgaattct 44655922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 16140074 - 16140236
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||||| | |||||| || ||||||||  |||||| ||||||||||||||||||||||||||||||||  || ||||       
T  16140074 catgtatacggtagtcattttcacctctaggtgtaccgcatatatacaacaccttgtatttatcttttaaaaaatataaatagaacatcactctttt-aa 16140172  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          |||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||    
T  16140173 aaaaaatacgttttgattttatcaccggcctcttttcattcccagagccgagcctccgaattct 16140236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 13913576 - 13913408
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatac--ggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttn 98  Q
    |||||||||||||||||||||||| ||| |||||| || ||||||||  |||| |||||||||||||||||||||||||||||||| ||||||||||||     
T  13913576 catgtatacggtagtcattttcacttttaggtgtaccgcatatatacccggcaacttatatttatcttttaaaaaatataaatagatcattgctttttt- 13913478  T
Q  99 nnnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttagg 168  Q
            ||| |||||||||| |||||||| ||||||||||| ||||||| ||||||| ||||||||||    
T  13913477 aaaaaaaatacattttgattttatcactggcatcttttcattctcagagccaagcctccgaattcttagg 13913408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 3406437 - 3406600
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||||||||  | |||||  | |||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||       
T  3406437 catgtatacggtagtcattttcacctccgagtgtactgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttttaaa 3406536  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
           ||||||| ||||| |||||| ||||||||||||||| |||| |||||||||||||||    
T  3406537 aaaaaaaacgttttcattttatcactgacctcttttcattccccgagctgagcctccaaattct 3406600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 3440383 - 3440220
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||||||||  | |||||  | |||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||       
T  3440383 catgtatacggtagtcattttcacctccgagtgtactgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacatcgctcttttaaa 3440284  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
           ||||||| ||||| |||||| ||||||||||||||| |||| |||||||||||||||    
T  3440283 aaaaaaaacgttttcattttatcactgacctcttttcattccccgagctgagcctccaaattct 3440220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 4971712 - 4971558
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||| | |||||||| || |||||||||| ||||| ||||||||||||||||||||||||||||||||||| | |||       
T  4971712 catgtatacggtagtcattttcacttatgggtgtaccgcatatatacggtaccttgtatttatcttttaaaaaatataaatagaacattgc-tctttaaa 4971614  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctc 156  Q
          || ||||||||||| ||||||| |||||||||||||| || |||||||||    
T  4971613 aaaaaatatgttttgattttatcactggtctcttttcattccccgaaccgagcctc 4971558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 50881449 - 50881610
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||| |||||||||||||||| | | |||| || ||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||       
T  50881449 catgtatactgtagtcattttcacctctagatgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattgctctttt--a 50881546  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          ||  |||| ||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  50881547 aaaaaatagattttaattttatcactggcctcttttcatttccagagccgagcctccgaattct 50881610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 164
Target Start/End: Complemental strand, 22865538 - 22865392
Alignment:
Q  17 attttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnnnnnnnntacgttttga 116  Q
    ||||||||||||||||||| ||| ||||||  ||| ||| |||||||||||||||||||||||||||||||||||| ||||         ||||||||||    
T  22865538 attttcacctttgggtgtaccga-tatatagagcatcttgtatttatcttttaaaaaatataaatagaacattgctcttttgaaaaaaaatacgttttga 22865440  T
Q  117 ttttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
    |||| ||| || |||||||||||||||||||||| |||||| ||||||    
T  22865439 ttttatcattgacctcttttcattcccagagccgtgcctccgaattct 22865392  T

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Target: chr1; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 41697231 - 41697080
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    |||||||||||||||||||||||| | ||| ||||  | |||||||||  || || |||||||||||||||||||||||||||||||| ||| ||||       
T  41697231 catgtatacggtagtcattttcacttctggatgtactgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacatcgctctttt-aa 41697133  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagc 153  Q
          |||||||||||||| |||||| |||||||||||||||||||||||||    
T  41697132 aaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagc 41697080  T

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Target: chr1; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 6889634 - 6889789
Alignment:
Q  5 tatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnnnnnn 104  Q
    ||||||| | |||||||||||| ||| |||| || |||||||||  || || |||||||||||||||||||||||||||||||||||| ||||           
T  6889634 tatacggcaatcattttcacctctggatgtaccgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacattgctctttt--aaaaa 6889731  T
Q  105 nntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaatt 162  Q
      |||||||||||||| |||||| ||||||||||||| |||| |||||||||| ||||    
T  6889732 aatacgttttgattttatcactgacctcttttcattctcagaaccgagcctccgaatt 6889789  T

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Target: chr1; HSP #25
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 6891480 - 6891635
Alignment:
Q  5 tatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnnnnnn 104  Q
    ||||||| | |||||||||||| ||| |||| || |||||||||  || || |||||||||||||||||||||||||||||||||||| ||||           
T  6891480 tatacggcaatcattttcacctctggatgtaccgcatatatacgatactttgtatttatcttttaaaaaatataaatagaacattgctctttt--aaaaa 6891577  T
Q  105 nntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaatt 162  Q
      |||||||||||||| |||||| ||||||||||||| |||| |||||||||| ||||    
T  6891578 aatacgttttgattttatcactgacctcttttcattctcagaaccgagcctccgaatt 6891635  T

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Target: chr1; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 47 - 164
Target Start/End: Complemental strand, 27906777 - 27906660
Alignment:
Q  47 cggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnnnnnnnntacgttttgattttttcactggcctcttttcattcccaga 146  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| ||||         || ||||||||||| |||||||||||||||||||  ||||    
T  27906777 cggcaccttgtatttatcttttaaaaaatataaatggaacattgctcttttaaaaaaaattatgttttgattttatcactggcctcttttcattttcaga 27906678  T
Q  147 gccgagcctccaaattct 164  Q
    ||||||||||| ||||||    
T  27906677 gccgagcctccgaattct 27906660  T

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Target: chr1; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 44895671 - 44895851
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctttttt-nn 99  Q
    ||||||||||||| ||||||||||||||||||||| |      |  || ||||||||||||||||||||||||||||||||||| ||||| ||||||       
T  44895671 catgtatacggtaatcattttcacctttgggtgtacc------acccgccaccttatatttatcttttaaaaaatataaatagatcattgtttttttaaa 44895764  T
Q  100 nnnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattcttag-gacgaccctgatgattgt 185  Q
           || |||||||||||||||| | |||||||||||||||||| |||| ||||| |||| |||| ||| |||||||| |||||    
T  44895765 aaaaaaatatgttttgattttttcaccgacctcttttcattcccagaaccgaacctccgaatttttagagacaaccctgataattgt 44895851  T

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Target: chr1; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 38547130 - 38547041
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||||||| | |||| |||||||| |||||||||| |  |||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  38547130 catgtatatgatagtgattttcacatttgggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattg 38547041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 39134817 - 39134727
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatc-ttttaaaaaatataaatagaacattg 90  Q
    ||||||||| ||||| ||| |||||||||||||||| | |||||||| ||||||| |||||||| ||||||||||| ||||||||||||||    
T  39134817 catgtatacagtagtgattatcacctttgggtgtattgcatatatacagcaccttgtatttatctttttaaaaaatttaaatagaacattg 39134727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 45758513 - 45758602
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||||||| |||||||||||||| |||||   ||||||||  ||||||  |||||||||||||||||| ||||||||||||||    
T  45758513 catgtatacggtagtgattttcacctttggatgtataacatatatacaacaccttgcatttatcttttaaaaaatttaaatagaacattg 45758602  T

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Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 26803967 - 26804045
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaata 82  Q
    ||||||||||||||| |||||||||||   |||||||| ||||||||| || ||| ||||||||||||||||||| ||||||    
T  26803967 catgtatacggtagtgattttcacctt---gtgtatcgcatatatacgacatcttgtatttatcttttaaaaaatttaaata 26804045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 38853541 - 38853627
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaaca 87  Q
    ||||||||||||||| |||||||||||||| | ||    ||||||||| |||||| |||||||| |||||||||| |||||||||||    
T  38853541 catgtatacggtagtgattttcacctttggatatacaacatatatacgacaccttgtatttatcatttaaaaaatttaaatagaaca 38853627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 33170778 - 33170874
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctttttt 97  Q
    ||||||||||||||| ||||||||| || |||||| || ||||||||  ||| || ||||||  ||||||||||| |||||| ||||||| ||||||    
T  33170778 catgtatacggtagtgattttcaccatttggtgtaccgcatatatacaacacattgtatttacgttttaaaaaatttaaatataacattgttttttt 33170874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 5533331 - 5533421
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatctttt-aaaaaatataaatagaacattg 90  Q
    ||||||||||||||| |||||||||||||  ||||    |||||||||||||||| | |||||||||| ||||||| ||||||||| ||||    
T  5533331 catgtatacggtagtgattttcacctttgattgtacatcatatatacggcaccttgtgtttatcttttaaaaaaatttaaatagaatattg 5533421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 35392295 - 35392376
Alignment:
Q  7 tacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacatt 89  Q
    ||||||||| |||||||||||||| | || || |||||||||||||||| ||||||||  ||||||||| |||||| ||||||    
T  35392295 tacggtagtgattttcacctttggatataccgcatatatacggcaccttgtatttatc-cttaaaaaatttaaataaaacatt 35392376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 164
Target Start/End: Original strand, 34247151 - 34247208
Alignment:
Q  107 tacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
    |||||||||||||| |||||| ||| |||||||| |||||||||||||||| ||||||    
T  34247151 tacgttttgattttatcactgaccttttttcatttccagagccgagcctccgaattct 34247208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 50146315 - 50146404
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||||||| |||| | ||||| |||||||||| ||||  ||||| ||||||||||  |||||||||| ||||| | ||||||||||||||    
T  50146315 catgtatagggtaatgatttttacctttgggtctatcacatatacacggcaccttgcatttatctttcaaaaagtttaaatagaacattg 50146404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 10926048 - 10925976
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaa 73  Q
    ||||||||||||||| ||||||| |||||| || |||  ||||||||||||| || ||||||| |||||||||    
T  10926048 catgtatacggtagtgattttcatctttggatgcatctcatatatacggcacattgtatttattttttaaaaa 10925976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 43235864 - 43235774
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttt--taaaaaatataaatagaacatt 89  Q
    |||||||||| |||| |||||||||||||||||||    ||||||||| || ||| |||||||||||   ||||||| |||||||||||||    
T  43235864 catgtatacgatagtgattttcacctttgggtgtacatcatatatacgacatcttgtatttatctttaaaaaaaaatttaaatagaacatt 43235774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 17322678 - 17322628
Alignment:
Q  40 atatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||||||||  || || ||||||||||| ||||||||||||||||||||||    
T  17322678 atatatacgctacattgtatttatctttaaaaaaatataaatagaacattg 17322628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 6221737 - 6221785
Alignment:
Q  41 tatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||||||||||| || |||||||||||| |||||| ||||||||||||||    
T  6221737 tatatacggcacattgtatttatctttt-aaaaatttaaatagaacattg 6221785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 32
Target Start/End: Complemental strand, 52127550 - 52127521
Alignment:
Q  3 tgtatacggtagtcattttcacctttgggt 32  Q
    ||||||||||||||||||||||||||||||    
T  52127550 tgtatacggtagtcattttcacctttgggt 52127521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 27906811 - 27906779
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtg 33  Q
    |||||||||||||||||||||||||| ||||||    
T  27906811 catgtatacggtagtcattttcacctctgggtg 27906779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 1351 - 1513
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnn 100  Q
    ||||||||||||||||||||||| || |||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||| |||| ||||       
T  1351 catgtatacggtagtcattttcatctctgggtgtaccgcatatatacggcagcttgtatttatcttttaaaaaatataaatagaacagtgctctttt-aa 1449  T
Q  101 nnnnnntacgttttgattttttcactggcctcttttcattcccagagccgagcctccaaattct 164  Q
          |||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||    
T  1450 aaaaaatacgttttgattttatcactgacctcttttcattcccagagccgagcctccgaattct 1513  T

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Target: scaffold0018 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 173602 - 173516
Alignment:
Q  4 gtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||||||||||| ||||| |||||||||||||||| |||||||||| ||||| ||||||||||||||||||| ||||||||||||||    
T  173602 gtatacggtagtgatttttacctttgggtgtatcgcatatatacggtaccttgtatttatcttttaaaaaatttaaatagaacattg 173516  T

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Target: scaffold1590 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 353 - 264
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    ||||||||||||||| |||||||| |||||||||| || ||||||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  353 catgtatacggtagtgattttcacatttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattg 264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 38937 - 39027
Alignment:
Q  5 tatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctttt 95  Q
    ||||||||||| |||||||| |||| |||||||| ||||||||| |||||| ||||||||||||||||||| |||||||||||||| ||||    
T  38937 tatacggtagtgattttcacatttgtgtgtatcgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttttt 39027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 1362 - 1450
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacatt 89  Q
    |||||||||| |||| |||||||| ||||||||||| | |||||||| ||||||||||||||||||||||||| | |||||||||||||    
T  1362 catgtatacgatagtgattttcacatttgggtgtatagcatatatacagcaccttatatttatcttttaaaaattttaaatagaacatt 1450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 206584 - 206496
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacatt 89  Q
    ||||||||||||||| ||||||||| ||||||||| || ||||||||| |||||| ||||||||||||| ||||| |||||||||||||    
T  206584 catgtatacggtagtgattttcaccattgggtgtaccgcatatatacgacaccttgtatttatcttttacaaaatttaaatagaacatt 206496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 230954 - 230865
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||||||| |||||| |||||||||||||||| ||||| ||||||||  ||||||| ||||||||||||| |||| ||||||||||||||    
T  230954 catgtataaggtagtgattttcacctttgggtatatcgcatatatacaacaccttaaatttatcttttaacaaatttaaatagaacattg 230865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 24083 - 23999
Alignment:
Q  6 atacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattg 90  Q
    |||||||| | |||||||| |||||||||| || ||||||||| |||||| ||||||||||||||||||| ||||||||| ||||    
T  24083 atacggtaatgattttcacttttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaatattg 23999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 156
Target Start/End: Original strand, 183107 - 183222
Alignment:
Q  40 atatatacggcaccttatatttatcttttaaaaaatataaatagaacattgcttttttnnnnnnnnntacgttttgattttttcactggcctcttttcat 139  Q
    |||||||||  || || ||||||||||||||||||||||||||||||||  || ||||         |||||||| ||||| ||||||||||||||||||    
T  183107 atatatacgatactttgtatttatcttttaaaaaatataaatagaacatctctcttttaaaaaaaa-tacgttttaattttatcactggcctcttttcat 183205  T
Q  140 tcccagagccgagcctc 156  Q
    |||||||||||||||||    
T  183206 tcccagagccgagcctc 183222  T

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Target: scaffold0022 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 40093 - 40184
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaata--taaatagaacattg 90  Q
    |||||||||| | || ||||||||||| |||||||    ||| |||||||||||| |||||||||||||||||| |  ||||||||||||||    
T  40093 catgtatacgattgtgattttcaccttagggtgtacaacataaatacggcaccttgtatttatcttttaaaaaaaaattaaatagaacattg 40184  T

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Target: scaffold0022; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 138153 - 138244
Alignment:
Q  1 catgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaata--taaatagaacattg 90  Q
    |||||||||| | || ||||||||||| |||||||    ||| |||||||||||| |||||||||||||||||| |  ||||||||||||||    
T  138153 catgtatacgattgtgattttcaccttagggtgtacaacataaatacggcaccttgtatttatcttttaaaaaaaaattaaatagaacattg 138244  T

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Target: scaffold0229 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 23893 - 23985
Alignment:
Q  3 tgtatacggtagtcattttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaaaaaatataaatagaacattgctttt 95  Q
    ||||||||||||||||||| |  |||||| ||  |  | | ||||||||||| |||||||| |||||||||| ||||||||||| ||| ||||    
T  23893 tgtatacggtagtcatttttatttttgggggttccccaaaaatacggcacctcatatttattttttaaaaaaaataaatagaaccttggtttt 23985  T

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Target: scaffold0227 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 16123 - 16161
Alignment:
Q  51 accttatatttatcttttaaaaaatataaatagaacatt 89  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  16123 accttgtatttatcttttaaaaaatttaaatagaacatt 16161  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 351413 - 351360
Alignment:
Q  17 attttcacctttgggtgtatcgaatatatacggcaccttatatttatcttttaa 70  Q
    |||||||||||||||||||    ||||||||| |||||| ||||||||||||||    
T  351413 attttcacctttgggtgtacaacatatatacgacaccttgtatttatcttttaa 351360  T

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