View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8951_low_17 (Length: 306)
Name: NF8951_low_17
Description: NF8951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8951_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 14 - 279
Target Start/End: Original strand, 3472733 - 3472998
Alignment:
| Q |
14 |
agagagagtgagagggtagggttaatatgtgacagtgaagagcacatggtttgtaagtgttggaaaatgaagaaagagtaaaaatataaatgtgtataag |
113 |
Q |
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| T |
3472733 |
agagagagtgagagggtagggttaatatgtgacagtgaagagcacatggtttgtaagtgttggaaaatgaagaaagagtaaaaatataaatgtgtataag |
3472832 |
T |
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| Q |
114 |
atgatggaaatgaaatgaagatgagtttgattttgcatgtgaatttggtgaagttacgcaacgtagagtggatggtagtgttttgagaagagagagagtg |
213 |
Q |
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| T |
3472833 |
atgataaaaatgaaatgaagatgagtttgattttgcatgtgaatttggtgaagttacgcaacgtagagtggattgtagtgttttgggaagagagagagtg |
3472932 |
T |
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| Q |
214 |
ttgtgttgtggggttatcaaacgttggtgttttatgcatatgtgtacgtgtgtaacttcccctatg |
279 |
Q |
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| T |
3472933 |
ttgtgttgtggggttatcaaacgttggtgttttatgcatatgtgtacgtgtgtaacttcccctatg |
3472998 |
T |
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