View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8951_low_8 (Length: 406)

Name: NF8951_low_8
Description: NF8951
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8951_low_8
NF8951_low_8
[»] chr8 (36 HSPs)
chr8 (176-382)||(6354726-6354936)
chr8 (12-107)||(6354562-6354657)
chr8 (183-234)||(36366110-36366161)
chr8 (183-241)||(12958780-12958838)
chr8 (181-234)||(24915253-24915306)
chr8 (183-239)||(10839769-10839825)
chr8 (183-234)||(35011223-35011274)
chr8 (183-234)||(44796353-44796404)
chr8 (182-231)||(10184636-10184685)
chr8 (181-230)||(16448873-16448922)
chr8 (182-243)||(34711083-34711144)
chr8 (182-234)||(7693118-7693170)
chr8 (187-235)||(15726849-15726897)
chr8 (183-231)||(42786378-42786426)
chr8 (183-234)||(6899431-6899482)
chr8 (183-234)||(22429546-22429597)
chr8 (183-234)||(24177983-24178034)
chr8 (181-228)||(38298585-38298632)
chr8 (181-228)||(43932133-43932180)
chr8 (181-235)||(8453678-8453732)
chr8 (182-239)||(13831445-13831503)
chr8 (176-230)||(14578514-14578568)
chr8 (181-234)||(5031475-5031528)
chr8 (182-231)||(6354662-6354710)
chr8 (182-239)||(7693039-7693096)
chr8 (181-226)||(24599753-24599798)
chr8 (182-231)||(24915184-24915233)
chr8 (182-234)||(6899504-6899556)
chr8 (182-234)||(8793804-8793856)
chr8 (182-234)||(12958860-12958912)
chr8 (182-234)||(15720210-15720262)
chr8 (182-234)||(22429619-22429671)
chr8 (182-234)||(24822808-24822860)
chr8 (186-234)||(32575182-32575230)
chr8 (182-234)||(40483294-40483346)
chr8 (182-234)||(44796426-44796478)
[»] scaffold0110 (1 HSPs)
scaffold0110 (182-231)||(1617-1666)
[»] chr5 (24 HSPs)
chr5 (181-234)||(27488358-27488411)
chr5 (182-231)||(11142448-11142497)
chr5 (181-234)||(15968322-15968375)
chr5 (183-235)||(38394438-38394490)
chr5 (183-234)||(22731344-22731395)
chr5 (181-230)||(35349497-35349546)
chr5 (182-234)||(29299368-29299420)
chr5 (183-239)||(36286065-36286121)
chr5 (179-230)||(28499793-28499844)
chr5 (183-234)||(29031122-29031173)
chr5 (181-231)||(1138301-1138351)
chr5 (189-231)||(8235469-8235511)
chr5 (180-234)||(12115087-12115141)
chr5 (181-231)||(36434762-36434812)
chr5 (183-232)||(1015241-1015290)
chr5 (183-231)||(26327549-26327598)
chr5 (182-234)||(1015167-1015219)
chr5 (182-234)||(1138229-1138281)
chr5 (182-246)||(6499980-6500044)
chr5 (182-234)||(15968395-15968447)
chr5 (182-234)||(22731270-22731322)
chr5 (190-234)||(26163972-26164016)
chr5 (179-231)||(35463963-35464015)
chr5 (182-234)||(36417132-36417184)
[»] chr2 (65 HSPs)
chr2 (181-234)||(20555269-20555322)
chr2 (181-232)||(11030276-11030327)
chr2 (183-234)||(45571041-45571092)
chr2 (183-234)||(45574708-45574759)
chr2 (183-234)||(45578375-45578426)
chr2 (183-234)||(45582042-45582093)
chr2 (183-234)||(45585709-45585760)
chr2 (183-234)||(45589376-45589427)
chr2 (183-234)||(45593043-45593094)
chr2 (183-234)||(45596710-45596761)
chr2 (183-234)||(45600377-45600428)
chr2 (183-234)||(45604044-45604095)
chr2 (183-234)||(45607711-45607762)
chr2 (183-234)||(45611378-45611429)
chr2 (183-234)||(45615045-45615096)
chr2 (181-227)||(7833300-7833346)
chr2 (183-232)||(4063285-4063334)
chr2 (182-235)||(43135042-43135094)
chr2 (182-234)||(12486077-12486129)
chr2 (181-228)||(4755479-4755526)
chr2 (183-234)||(45034409-45034460)
chr2 (181-234)||(7943523-7943577)
chr2 (183-233)||(11794461-11794511)
chr2 (182-247)||(5559598-5559663)
chr2 (182-235)||(41153196-41153249)
chr2 (189-237)||(3365367-3365415)
chr2 (182-234)||(5109374-5109426)
chr2 (182-234)||(41205575-41205627)
chr2 (183-234)||(4044660-4044711)
chr2 (183-230)||(15384442-15384489)
chr2 (182-229)||(31943651-31943698)
chr2 (189-228)||(44283625-44283664)
chr2 (182-236)||(7256408-7256462)
chr2 (181-231)||(9152463-9152513)
chr2 (180-210)||(20218625-20218655)
chr2 (176-230)||(27279498-27279552)
chr2 (182-239)||(3838424-3838481)
chr2 (183-232)||(3838503-3838552)
chr2 (182-235)||(4044585-4044638)
chr2 (186-231)||(9121279-9121324)
chr2 (181-234)||(37076229-37076282)
chr2 (181-234)||(38983083-38983136)
chr2 (182-231)||(43713988-43714037)
chr2 (182-234)||(3037810-3037862)
chr2 (182-234)||(4063356-4063408)
chr2 (183-231)||(5559377-5559425)
chr2 (182-234)||(15384511-15384563)
chr2 (182-246)||(28249018-28249082)
chr2 (182-234)||(32457224-32457276)
chr2 (176-216)||(36452468-36452508)
chr2 (189-221)||(41119974-41120006)
chr2 (182-234)||(45034482-45034534)
chr2 (182-234)||(45571114-45571166)
chr2 (182-234)||(45574781-45574833)
chr2 (182-234)||(45578448-45578500)
chr2 (182-234)||(45582115-45582167)
chr2 (182-234)||(45585782-45585834)
chr2 (182-234)||(45589449-45589501)
chr2 (182-234)||(45593116-45593168)
chr2 (182-234)||(45596783-45596835)
chr2 (182-234)||(45600450-45600502)
chr2 (182-234)||(45604117-45604169)
chr2 (182-234)||(45607784-45607836)
chr2 (182-234)||(45611451-45611503)
chr2 (182-234)||(45615118-45615170)
[»] chr3 (27 HSPs)
chr3 (181-232)||(49885392-49885443)
chr3 (181-234)||(45010834-45010887)
chr3 (183-234)||(5177851-5177902)
chr3 (182-234)||(12747782-12747834)
chr3 (182-234)||(33371945-33371997)
chr3 (176-234)||(27108550-27108609)
chr3 (181-235)||(43448968-43449022)
chr3 (182-231)||(8987743-8987792)
chr3 (182-235)||(51723388-51723441)
chr3 (182-234)||(19649664-19649716)
chr3 (182-234)||(48593227-48593279)
chr3 (182-224)||(4980069-4980111)
chr3 (181-211)||(19996070-19996100)
chr3 (181-227)||(44664200-44664246)
chr3 (181-231)||(52864965-52865015)
chr3 (181-235)||(54537453-54537507)
chr3 (182-231)||(28043451-28043500)
chr3 (176-229)||(29290794-29290847)
chr3 (182-239)||(29457846-29457903)
chr3 (183-232)||(29457925-29457974)
chr3 (181-210)||(32711286-32711315)
chr3 (181-230)||(42225577-42225626)
chr3 (182-235)||(43449043-43449096)
chr3 (182-234)||(379081-379133)
chr3 (182-234)||(28406478-28406530)
chr3 (183-231)||(33371875-33371923)
chr3 (182-234)||(33808395-33808446)
[»] chr1 (37 HSPs)
chr1 (181-234)||(49944844-49944897)
chr1 (182-243)||(15343022-15343083)
chr1 (182-235)||(34146889-34146942)
chr1 (181-234)||(38738015-38738068)
chr1 (182-246)||(49184238-49184302)
chr1 (183-234)||(43929431-43929482)
chr1 (180-231)||(45848953-45849004)
chr1 (181-235)||(519917-519971)
chr1 (181-231)||(44939150-44939200)
chr1 (182-231)||(25021245-25021294)
chr1 (179-232)||(25021313-25021366)
chr1 (181-234)||(38040360-38040413)
chr1 (179-231)||(5368852-5368904)
chr1 (183-231)||(6793608-6793656)
chr1 (181-233)||(23923406-23923458)
chr1 (182-234)||(50155383-50155435)
chr1 (186-241)||(26823141-26823196)
chr1 (179-230)||(34890264-34890315)
chr1 (183-234)||(47678341-47678392)
chr1 (183-234)||(47844545-47844596)
chr1 (184-229)||(11386170-11386216)
chr1 (181-232)||(38590150-38590203)
chr1 (182-227)||(1811276-1811321)
chr1 (181-234)||(7375553-7375606)
chr1 (182-231)||(8971242-8971291)
chr1 (182-231)||(15285521-15285570)
chr1 (181-234)||(24305749-24305802)
chr1 (181-234)||(29892214-29892267)
chr1 (183-232)||(33018254-33018303)
chr1 (183-232)||(34662695-34662744)
chr1 (176-217)||(50105684-50105725)
chr1 (182-234)||(26760184-26760236)
chr1 (182-234)||(26924298-26924350)
chr1 (182-234)||(28359007-28359059)
chr1 (184-224)||(35533569-35533609)
chr1 (182-234)||(37515175-37515227)
chr1 (182-234)||(47678267-47678319)
[»] chr4 (43 HSPs)
chr4 (182-234)||(30191907-30191959)
chr4 (183-234)||(3043803-3043854)
chr4 (183-234)||(20745417-20745468)
chr4 (181-228)||(24100776-24100823)
chr4 (181-228)||(24100888-24100935)
chr4 (182-232)||(43117939-43117989)
chr4 (182-239)||(21554193-21554250)
chr4 (179-232)||(26066382-26066435)
chr4 (181-234)||(41116573-41116626)
chr4 (181-234)||(55190750-55190803)
chr4 (182-234)||(45828500-45828552)
chr4 (182-234)||(53225729-53225781)
chr4 (183-234)||(2643619-2643670)
chr4 (183-234)||(20459326-20459377)
chr4 (181-228)||(27587330-27587377)
chr4 (183-234)||(42804267-42804318)
chr4 (183-234)||(43020767-43020818)
chr4 (183-234)||(47866047-47866098)
chr4 (186-232)||(16412247-16412293)
chr4 (182-234)||(42169128-42169180)
chr4 (182-234)||(48361063-48361115)
chr4 (183-234)||(20956901-20956952)
chr4 (181-228)||(36196449-36196496)
chr4 (182-232)||(3043876-3043926)
chr4 (176-226)||(3345396-3345446)
chr4 (182-228)||(29686485-29686531)
chr4 (182-228)||(32645575-32645621)
chr4 (182-232)||(34226400-34226450)
chr4 (181-231)||(44111829-44111879)
chr4 (182-239)||(36132641-36132698)
chr4 (181-234)||(48195901-48195954)
chr4 (182-235)||(55292197-55292250)
chr4 (182-210)||(1140900-1140928)
chr4 (182-234)||(4698708-4698760)
chr4 (182-234)||(8347656-8347708)
chr4 (186-234)||(8826779-8826827)
chr4 (182-234)||(20459252-20459304)
chr4 (183-235)||(27841842-27841893)
chr4 (182-234)||(37991497-37991549)
chr4 (182-230)||(39993123-39993171)
chr4 (182-234)||(43020840-43020892)
chr4 (182-234)||(47866120-47866172)
chr4 (183-235)||(48373428-48373480)
[»] chr7 (26 HSPs)
chr7 (182-241)||(31903035-31903094)
chr7 (181-234)||(8566165-8566218)
chr7 (181-234)||(36245460-36245513)
chr7 (182-231)||(41850610-41850659)
chr7 (183-239)||(4826768-4826824)
chr7 (186-230)||(32811798-32811842)
chr7 (183-234)||(27231919-27231970)
chr7 (183-234)||(32811463-32811514)
chr7 (181-235)||(28677401-28677455)
chr7 (182-231)||(31227507-31227556)
chr7 (182-235)||(32811388-32811441)
chr7 (182-234)||(28020012-28020064)
chr7 (181-228)||(45123329-45123376)
chr7 (182-236)||(31227577-31227631)
chr7 (181-234)||(10007660-10007713)
chr7 (181-234)||(11668099-11668152)
chr7 (182-227)||(16861530-16861575)
chr7 (181-234)||(30869270-30869323)
chr7 (181-234)||(40142857-40142910)
chr7 (182-234)||(1366606-1366658)
chr7 (183-231)||(1366680-1366728)
chr7 (182-230)||(2610202-2610250)
chr7 (182-234)||(4826846-4826898)
chr7 (182-234)||(29365706-29365758)
chr7 (182-210)||(40362005-40362033)
chr7 (181-229)||(45441520-45441568)
[»] chr6 (15 HSPs)
chr6 (182-231)||(7649813-7649862)
chr6 (183-234)||(2810090-2810141)
chr6 (183-233)||(1837045-1837095)
chr6 (182-234)||(1158330-1158382)
chr6 (182-234)||(10283379-10283431)
chr6 (182-230)||(12450366-12450414)
chr6 (181-221)||(33128849-33128889)
chr6 (181-232)||(3064896-3064947)
chr6 (181-228)||(9343137-9343184)
chr6 (182-234)||(766512-766564)
chr6 (182-234)||(2810163-2810215)
chr6 (191-235)||(2937090-2937134)
chr6 (186-231)||(7649888-7649935)
chr6 (183-235)||(8646764-8646816)
chr6 (182-234)||(28630838-28630890)
[»] scaffold0242 (1 HSPs)
scaffold0242 (183-239)||(16513-16569)
[»] scaffold0027 (1 HSPs)
scaffold0027 (182-228)||(5499-5545)
[»] scaffold0002 (1 HSPs)
scaffold0002 (182-210)||(423333-423361)


Alignment Details
Target: chr8 (Bit Score: 138; Significance: 5e-72; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 176 - 382
Target Start/End: Original strand, 6354726 - 6354936
Alignment:
Q  176 gatcggatacatcaattattcaatgaatctaaaaaattaattatttcttataaataggattggatgaaataacatttattgcttaaaaaa-taaaactcc 274  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||    
T  6354726 gatcgaatacataaattattcaatgaatctaaaaaattaattatttcttataaataggattggatgaagtaatatttattgcttaaaaaaataaaactcc 6354825  T
Q  275 tcaatattttgttgttaaaccagagatatcctccacgtacaaatgtttgtcacttatgc-----cacacaatgttttggtaaaagagtctaagcaaagag 369  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||      |||||||||||  |||||||||||||||| ||||||    
T  6354826 tcaatattttgttgttaaatcagagatatcctccacgtgcaaatgtctgtcacttatgttatgtcacacaatgtt--ggtaaaagagtctaagtaaagag 6354923  T
Q  370 atcatagaagtat 382  Q
    |||||||||||||    
T  6354924 atcatagaagtat 6354936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 6354562 - 6354657
Alignment:
Q  12 ttggtggtgtggtggaagagttatggagtaattaacgtagtctgagttcaattcttacatctagcaaaaactaaccaccgacataatactcattcg 107  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6354562 ttggtggtgtggtggaagagttatggagtaattaatgcagtctgagttcaattcttacatctagcaaaaactaacaaccgacataatactcattcg 6354657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 36366110 - 36366161
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| ||||||||||||||||||| | ||||||||||||||||    
T  36366110 tacatcaattattgaatgaatctaaaaaattaactttttcttataaatagga 36366161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 12958838 - 12958780
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaataggattggatg 241  Q
    ||||||||||||| |||||||||||||| |||| | ||||||||||||||||| |||||    
T  12958838 tacatcaattattgaatgaatctaaaaagttaactttttcttataaataggatcggatg 12958780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 24915253 - 24915306
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||||| |||||||||||||| |||||| |||| |||||||||||    
T  24915253 gatacatcaattatttaatgaatctaaaaagttaattttttcatataaatagga 24915306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 10839825 - 10839769
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaataggattgga 239  Q
    ||||| |||||||||||||||||||||| | |||| |||||||||||||||| ||||    
T  10839825 tacattaattattcaatgaatctaaaaagtcaattttttcttataaataggactgga 10839769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 35011274 - 35011223
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||| ||||||| ||||||||||||||||||| | ||||||||||||||||    
T  35011274 tacattaattattgaatgaatctaaaaaattaactttttcttataaatagga 35011223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 44796404 - 44796353
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||| |||| | ||||||||||||||||    
T  44796404 tacatcaattattgaatgaatctaaaaagttaactttttcttataaatagga 44796353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 10184636 - 10184685
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    ||||||||||||||||||||||||||||| |  ||| |||||||||||||    
T  10184636 atacatcaattattcaatgaatctaaaaagtcgattttttcttataaata 10184685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 16448873 - 16448922
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaat 230  Q
    ||||||||||||| |||||||||||||||| |||| | ||||||||||||    
T  16448873 gatacatcaattactcaatgaatctaaaaagttaaatttttcttataaat 16448922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 243
Target Start/End: Complemental strand, 34711144 - 34711083
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaataggattggatgaa 243  Q
    |||||||||||| |||||||||||||||| | |||| ||| ||||||||| || ||||||||    
T  34711144 atacatcaattactcaatgaatctaaaaagtcaatttttttttataaataagactggatgaa 34711083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 7693118 - 7693170
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||| ||||| |||||||||||||||| | |||| ||||||||||||||||    
T  7693118 atacattaattactcaatgaatctaaaaagtcaattttttcttataaatagga 7693170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 15726849 - 15726897
Alignment:
Q  187 tcaattattcaatgaatctaaaaaattaattatttcttataaataggat 235  Q
    ||||||| |||||||||||||||| | |||| |||||||||||||||||    
T  15726849 tcaattactcaatgaatctaaaaagtcaattttttcttataaataggat 15726897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 42786426 - 42786378
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    ||||||||||||| |||||||||||||| |||| | |||||||||||||    
T  42786426 tacatcaattattgaatgaatctaaaaagttaactttttcttataaata 42786378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 6899482 - 6899431
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| ||||||||| |||| |||| | ||||||||||||||||    
T  6899482 tacatcaattattgaatgaatctcaaaagttaaatttttcttataaatagga 6899431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 22429597 - 22429546
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||| ||||||| ||| ||||||||||||||| | ||||||||||||||||    
T  22429597 tacattaattattgaataaatctaaaaaattaactttttcttataaatagga 22429546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 24178034 - 24177983
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||||| |||| |||||||||||||| |||| | ||||||||||||||||    
T  24178034 tacatcaaatattgaatgaatctaaaaagttaactttttcttataaatagga 24177983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 38298585 - 38298632
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataa 228  Q
    ||||||| |||||||||||||| ||||||||| |||| ||||||||||    
T  38298585 gatacattaattattcaatgaacctaaaaaatcaattgtttcttataa 38298632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 43932133 - 43932180
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataa 228  Q
    ||||||| |||||||||||||||||||||| | |||| ||||||||||    
T  43932133 gatacattaattattcaatgaatctaaaaagtcaattgtttcttataa 43932180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 8453678 - 8453732
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaataggat 235  Q
    |||| |||||||| |||||| ||||||||||| || | |||||||||||||||||    
T  8453678 gatatatcaattactcaatgtatctaaaaaatcaaatttttcttataaataggat 8453732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 13831445 - 13831503
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaa-ttatttcttataaataggattgga 239  Q
    |||||||||||||| |||||||||||||| | || || |||||||||||||||| ||||    
T  13831445 atacatcaattatttaatgaatctaaaaagtcaatttttttcttataaataggactgga 13831503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 14578568 - 14578514
Alignment:
Q  176 gatcggatacatcaattattcaatgaatctaaaaaattaattatttcttataaat 230  Q
    |||| ||||||| |||||||||||||| |||||| ||||||| || |||||||||    
T  14578568 gatcagatacattaattattcaatgaacctaaaatattaatttttgcttataaat 14578514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 5031528 - 5031475
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| | ||||||| |||||| |||| | ||||||||||||||||    
T  5031528 gatacatcaattacttaatgaatttaaaaagttaaatttttcttataaatagga 5031475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 6354710 - 6354662
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    |||||| ||||||||||| |||| |||||||| |||||||||||||||||    
T  6354710 atacattaattattcaataaatc-aaaaaattcattatttcttataaata 6354662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 7693096 - 7693039
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaataggattgga 239  Q
    |||||||| |||| ||||||||| ||||| | || | |||||||||||||||||||||    
T  7693096 atacatcatttatgcaatgaatcaaaaaagtaaaatgtttcttataaataggattgga 7693039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 24599753 - 24599798
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttat 226  Q
    ||||||||| |||| ||||||||||||||||| |||| ||||||||    
T  24599753 gatacatcagttatacaatgaatctaaaaaatcaattgtttcttat 24599798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 24915233 - 24915184
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    |||||||||||||| |||||||| ||||||| |||| || ||||||||||    
T  24915233 atacatcaattatttaatgaatcaaaaaaataaattgttacttataaata 24915184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 6899504 - 6899556
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  6899504 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 6899556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 8793804 - 8793856
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||||| |||| ||||||||| ||||| | || ||||||||||||||||||    
T  8793804 atacatcatttatgcaatgaatcaaaaaagtcaaatatttcttataaatagga 8793856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 12958860 - 12958912
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  12958860 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 12958912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 15720262 - 15720210
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||||||||| || || | |||||||| |||||| ||||||||||||||||    
T  15720262 atacatcaattactctataagtctaaaaagttaattttttcttataaatagga 15720210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 22429619 - 22429671
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  22429619 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 22429671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 24822808 - 24822860
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||| |||||| |||| |||||||||| | |||| ||||||||||||||||    
T  24822808 atacattaattatacaataaatctaaaaagtcaattttttcttataaatagga 24822860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 32575230 - 32575182
Alignment:
Q  186 atcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||||||| |||||||||||||| |||| | |||||| |||||||||    
T  32575230 atcaattattgaatgaatctaaaaagttaactttttcttgtaaatagga 32575182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 40483346 - 40483294
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||||| |||| ||||||||  ||||| |||| ||||||||||||||||||    
T  40483346 atacatcatttatgcaatgaattaaaaaagttaaatatttcttataaatagga 40483294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 44796426 - 44796478
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  44796426 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 44796478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 1617 - 1666
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1617 atacatcaattattcaatgaatctaaaaaattaattttttcttataaata 1666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 4e-17; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 27488411 - 27488358
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  27488411 gatacatcaattattgaatgaatctaaaaaattaattttttcttataaatagga 27488358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 11142448 - 11142497
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    ||||||||||||||||||||||| ||||||| |||| |||||||||||||    
T  11142448 atacatcaattattcaatgaatcaaaaaaatgaattgtttcttataaata 11142497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 15968375 - 15968322
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||| ||||||| ||||||||||||||||||| | ||||||||||||||||    
T  15968375 gatacattaattattgaatgaatctaaaaaattaactttttcttataaatagga 15968322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 38394490 - 38394438
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaataggat 235  Q
    ||||| |||||||||||||||||||||| | |||| |||||||||||||||||    
T  38394490 tacattaattattcaatgaatctaaaaagtcaattttttcttataaataggat 38394438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 22731344 - 22731395
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||| ||||||| ||||||||||||||||||| | ||||||||||||||||    
T  22731344 tacattaattatttaatgaatctaaaaaattaactttttcttataaatagga 22731395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 35349497 - 35349546
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaat 230  Q
    ||||||||||||| |||||||||||||||| | |||||||| ||||||||    
T  35349497 gatacatcaattactcaatgaatctaaaaagtcaattattttttataaat 35349546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 29299420 - 29299368
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||||||| | |||||||||||||||||| || | ||||||||||||||||    
T  29299420 atacatcaatcactcaatgaatctaaaaaatcaaatttttcttataaatagga 29299368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 36286121 - 36286065
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaataggattgga 239  Q
    ||||||| |||| ||||||||| ||||||| || |||||||||||||||| ||||||    
T  36286121 tacatcatttatgcaatgaatcaaaaaaatcaagtatttcttataaatagaattgga 36286065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 28499844 - 28499793
Alignment:
Q  179 cggatacatcaattattcaatgaatctaaaaaattaattatttcttataaat 230  Q
    ||||||||| | |||||||||||||||||||||||| || || |||||||||    
T  28499844 cggatacattagttattcaatgaatctaaaaaattattttttgcttataaat 28499793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 29031122 - 29031173
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||||||| || |||||||||||||| |||| | ||||||||||||||||    
T  29031122 tacatcaattgttgaatgaatctaaaaagttaactttttcttataaatagga 29031173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 231
Target Start/End: Original strand, 1138301 - 1138351
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    ||||||| ||||||| ||||||| |||||||| |||| |||||||||||||    
T  1138301 gatacattaattatttaatgaatttaaaaaatcaattttttcttataaata 1138351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 231
Target Start/End: Original strand, 8235469 - 8235511
Alignment:
Q  189 aattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    ||||||||||| |||||||||||| |||| |||||||||||||    
T  8235469 aattattcaataaatctaaaaaatcaattttttcttataaata 8235511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 12115087 - 12115141
Alignment:
Q  180 ggatacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||| ||||||  |||||||||||||||||| ||| |||| |||||||||||    
T  12115087 ggatacaacaattaagcaatgaatctaaaaaattgattgtttcctataaatagga 12115141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 231
Target Start/End: Original strand, 36434762 - 36434812
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    ||||||||||||| | |||||||||||||| |||| | |||||||||||||    
T  36434762 gatacatcaattacttaatgaatctaaaaagttaaatttttcttataaata 36434812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 1015241 - 1015290
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatag 232  Q
    |||||| |||||| |||||||||||||| |||| | ||||||||||||||    
T  1015241 tacatcgattattgaatgaatctaaaaagttaactttttcttataaatag 1015290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 26327598 - 26327549
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaa-ttatttcttataaata 231  Q
    ||||||||||||| |||||||||||||| |||| || |||||||||||||    
T  26327598 tacatcaattattgaatgaatctaaaaagttaatttttttcttataaata 26327549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 1015219 - 1015167
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  1015219 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 1015167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 1138281 - 1138229
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||| ||||||||||| |||| ||||| | |||| ||||||||||||||||    
T  1138281 atacattaattattcaataaatcaaaaaagtaaattgtttcttataaatagga 1138229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 6500044 - 6499980
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaataggattggatgaaata 246  Q
    |||||||||||||| ||| |||||||||  | |||| ||||||||||||| ||| |||| |||||    
T  6500044 atacatcaattatttaataaatctaaaatgtcaattgtttcttataaatatgatcggataaaata 6499980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 15968395 - 15968447
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  15968395 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 15968447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 22731322 - 22731270
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  22731322 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 22731270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 26164016 - 26163972
Alignment:
Q  190 attattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||||||| |||||||||| | |||| ||||||||||||||||    
T  26164016 attattcaataaatctaaaaagtcaattgtttcttataaatagga 26163972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 35464015 - 35463963
Alignment:
Q  179 cggatacatcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    ||||||||| | |||||||||||| ||||||||||| || || ||||||||||    
T  35464015 cggatacattagttattcaatgaacctaaaaaattattttttgcttataaata 35463963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 36417132 - 36417184
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||| ||||||| |||| ||||||||| | |||| ||||||||||||||||    
T  36417132 atacataaattatttaatgtatctaaaaagtaaattgtttcttataaatagga 36417184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 4e-17; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 20555322 - 20555269
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  20555322 gatacatcaattattcaatgtatctaaaaaattaattttttcttataaatagga 20555269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 11030276 - 11030327
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaatag 232  Q
    ||||||||||||| |||||||||||||||| |||||| ||||||||||||||    
T  11030276 gatacatcaattactcaatgaatctaaaaagttaattttttcttataaatag 11030327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 45571092 - 45571041
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||| |||||| ||||||||||||||||    
T  45571092 tacatcaattattgaatgaatctaaaaagttaattttttcttataaatagga 45571041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 45574759 - 45574708
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||| |||||| ||||||||||||||||    
T  45574759 tacatcaattattgaatgaatctaaaaagttaattttttcttataaatagga 45574708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 45578426 - 45578375
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||| |||||| ||||||||||||||||    
T  45578426 tacatcaattattgaatgaatctaaaaagttaattttttcttataaatagga 45578375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 45582093 - 45582042
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||| |||||| ||||||||||||||||    
T  45582093 tacatcaattattgaatgaatctaaaaagttaattttttcttataaatagga 45582042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 45585760 - 45585709
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||| |||||| ||||||||||||||||    
T  45585760 tacatcaattattgaatgaatctaaaaagttaattttttcttataaatagga 45585709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 45589427 - 45589376
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||| |||||| ||||||||||||||||    
T  45589427 tacatcaattattgaatgaatctaaaaagttaattttttcttataaatagga 45589376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 45593094 - 45593043
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||| |||||| ||||||||||||||||    
T  45593094 tacatcaattattgaatgaatctaaaaagttaattttttcttataaatagga 45593043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 45596761 - 45596710
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||| |||||| ||||||||||||||||    
T  45596761 tacatcaattattgaatgaatctaaaaagttaattttttcttataaatagga 45596710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 45600428 - 45600377
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||| |||||| ||||||||||||||||    
T  45600428 tacatcaattattgaatgaatctaaaaagttaattttttcttataaatagga 45600377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 45604095 - 45604044
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||| |||||| ||||||||||||||||    
T  45604095 tacatcaattattgaatgaatctaaaaagttaattttttcttataaatagga 45604044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 45607762 - 45607711
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||| |||||| ||||||||||||||||    
T  45607762 tacatcaattattgaatgaatctaaaaagttaattttttcttataaatagga 45607711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 45611429 - 45611378
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||| |||||| ||||||||||||||||    
T  45611429 tacatcaattattgaatgaatctaaaaagttaattttttcttataaatagga 45611378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 45615096 - 45615045
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||| |||||| ||||||||||||||||    
T  45615096 tacatcaattattgaatgaatctaaaaagttaattttttcttataaatagga 45615045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 7833346 - 7833300
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttata 227  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||    
T  7833346 gatacatcaattattcaatgaatctaaaaaattgattgtttcttata 7833300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 4063334 - 4063285
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatag 232  Q
    ||||||||||||| ||||||||||||||||||| | ||||||||||||||    
T  4063334 tacatcaattattgaatgaatctaaaaaattaactttttcttataaatag 4063285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 43135094 - 43135042
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaataggat 235  Q
    |||| ||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  43135094 atacgtcaattatttaatgaatctaaaaaattaatt-tttcttataaataggat 43135042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 12486077 - 12486129
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||||||||||||||||||| | |||| |||||| |||||||||    
T  12486077 atacatcaattattcaatgaatctaaaaagtcaattgtttcttgtaaatagga 12486129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 4755526 - 4755479
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataa 228  Q
    ||||||| ||||||| ||||||||||||||||||||| ||||||||||    
T  4755526 gatacattaattatttaatgaatctaaaaaattaattgtttcttataa 4755479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 45034460 - 45034409
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||| |||| | ||||||||||||||||    
T  45034460 tacatcaattattgaatgaatctaaaaagttaactttttcttataaatagga 45034409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 7943523 - 7943577
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaa-ttatttcttataaatagga 234  Q
    |||||||||||||||||||||||||||||| | || || ||||||||||||||||    
T  7943523 gatacatcaattattcaatgaatctaaaaagtcaatttttttcttataaatagga 7943577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 11794511 - 11794461
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagg 233  Q
    ||||| ||||||||||| |||||||||||| |||| |||||||||||||||    
T  11794511 tacattaattattcaataaatctaaaaaatcaattttttcttataaatagg 11794461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 5559598 - 5559663
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaataggattggatgaaataa 247  Q
    |||||||| |||| ||||||||| ||||||| || ||| ||||||||||||||| ||| |||||||    
T  5559598 atacatcatttatgcaatgaatcaaaaaaatcaaatatgtcttataaataggatcggaggaaataa 5559663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 41153196 - 41153249
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaataggat 235  Q
    |||||||||||| |||||||||||||||| | || | |||||||||||||||||    
T  41153196 atacatcaattactcaatgaatctaaaaagtcaactttttcttataaataggat 41153249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 3365367 - 3365415
Alignment:
Q  189 aattattcaatgaatctaaaaaattaattatttcttataaataggattg 237  Q
    |||||||||||||||| ||||||| |||||||||||||||  |||||||    
T  3365367 aattattcaatgaatcaaaaaaatcaattatttcttataataaggattg 3365415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 5109426 - 5109374
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||| ||||| |||||||||||||||| |||| | ||||||||||||||||    
T  5109426 atacattaattactcaatgaatctaaaaagttaactttttcttataaatagga 5109374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 41205575 - 41205627
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||| ||||||| |||  |||||||||||||||||| ||||||||||||||    
T  41205575 atacataaattatttaatatatctaaaaaattaattatctcttataaatagga 41205627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 4044660 - 4044711
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||| || | | ||||||||||||||||    
T  4044660 tacatcaattattgaatgaatctaaaaattttactttttcttataaatagga 4044711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 230
Target Start/End: Complemental strand, 15384489 - 15384442
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaat 230  Q
    ||||||||||||| ||| |||||||||| |||||| ||||||||||||    
T  15384489 tacatcaattattaaataaatctaaaaagttaattttttcttataaat 15384442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 229
Target Start/End: Original strand, 31943651 - 31943698
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaa 229  Q
    ||||||||||| ||||||||||||||||| | |||||||||| |||||    
T  31943651 atacatcaattgttcaatgaatctaaaaagtaaattatttctcataaa 31943698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 228
Target Start/End: Original strand, 44283625 - 44283664
Alignment:
Q  189 aattattcaatgaatctaaaaaattaattatttcttataa 228  Q
    |||||||||||||||||||||| | |||||||||||||||    
T  44283625 aattattcaatgaatctaaaaagtcaattatttcttataa 44283664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 7256408 - 7256462
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaataggatt 236  Q
    |||| ||||||||||| | |||||||||||| ||||||||||||| || ||||||    
T  7256408 atacgtcaattattcacttaatctaaaaaatgaattatttcttattaaaaggatt 7256462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 231
Target Start/End: Original strand, 9152463 - 9152513
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    ||||||||||||| |||||||||||||||| | |||| |||||| ||||||    
T  9152463 gatacatcaattactcaatgaatctaaaaagtcaattgtttcttgtaaata 9152513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 210
Target Start/End: Original strand, 20218625 - 20218655
Alignment:
Q  180 ggatacatcaattattcaatgaatctaaaaa 210  Q
    |||||||||||||||||||||||||||||||    
T  20218625 ggatacatcaattattcaatgaatctaaaaa 20218655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 27279552 - 27279498
Alignment:
Q  176 gatcggatacatcaattattcaatgaatctaaaaaattaattatttcttataaat 230  Q
    |||||||||||| | |||||||||||| ||||||||||| || || |||||||||    
T  27279552 gatcggatacattagttattcaatgaacctaaaaaattattttttgcttataaat 27279498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 3838481 - 3838424
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaataggattgga 239  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| |||||| ||||    
T  3838481 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggactgga 3838424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 3838503 - 3838552
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatag 232  Q
    ||||||||| ||| |||||||||||||| |||| | ||||||||||||||    
T  3838503 tacatcaatcattgaatgaatctaaaaagttaactttttcttataaatag 3838552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 4044638 - 4044585
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaataggat 235  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| |||||||    
T  4044638 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggat 4044585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 9121279 - 9121324
Alignment:
Q  186 atcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    ||||||||||  |||||||||||||||||||| ||| |||||||||    
T  9121279 atcaattattttatgaatctaaaaaattaattgtttattataaata 9121324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 37076229 - 37076282
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||||||||||| |||| |||||||||| |  ||| ||||||||||||||||    
T  37076229 gatacatcaattatccaataaatctaaaaagtcgattgtttcttataaatagga 37076282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 38983083 - 38983136
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||||||||||  ||||||||||||||||| || | ||| ||||||||||||    
T  38983083 gatacatcaattacacaatgaatctaaaaaatcaacttttttttataaatagga 38983136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 43714037 - 43713988
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    |||||| | |||||||||||||| ||||||| |||| |||||||||||||    
T  43714037 atacataatttattcaatgaatcaaaaaaatcaattgtttcttataaata 43713988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 3037810 - 3037862
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||| |||||||||||||||||||||||| | || |||||| || ||||||    
T  3037810 atacataaattattcaatgaatctaaaaaatcatttgtttcttgtatatagga 3037862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 4063356 - 4063408
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  4063356 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 4063408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 5559425 - 5559377
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    ||||||||||| |||||||||||||||| | || | |||||||||||||    
T  5559425 tacatcaattactcaatgaatctaaaaagtcaaatttttcttataaata 5559377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 15384511 - 15384563
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  15384511 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 15384563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 28249018 - 28249082
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaataggattggatgaaata 246  Q
    |||||| ||||||| |||||||||||||| | || | |||||||||||||| | |||| ||||||    
T  28249018 atacattaattatttaatgaatctaaaaagtcaactttttcttataaatagaactggaggaaata 28249082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 32457276 - 32457224
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||||| |||| ||||||||| ||||| | || ||||||||||||||||||    
T  32457276 atacatcatttatgcaatgaatcaaaaaagtcaaatatttcttataaatagga 32457224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 36452468 - 36452508
Alignment:
Q  176 gatcggatacatcaattattcaatgaatctaaaaaattaat 216  Q
    |||| |||||||||||||||||||||||||| |||| ||||    
T  36452468 gatcagatacatcaattattcaatgaatctagaaaactaat 36452508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 189 - 221
Target Start/End: Complemental strand, 41120006 - 41119974
Alignment:
Q  189 aattattcaatgaatctaaaaaattaattattt 221  Q
    |||||||||||||||||||||||| ||||||||    
T  41120006 aattattcaatgaatctaaaaaatcaattattt 41119974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 45034482 - 45034534
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  45034482 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 45034534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 45571114 - 45571166
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  45571114 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 45571166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 45574781 - 45574833
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  45574781 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 45574833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 45578448 - 45578500
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  45578448 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 45578500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 45582115 - 45582167
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  45582115 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 45582167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 45585782 - 45585834
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  45585782 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 45585834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 45589449 - 45589501
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  45589449 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 45589501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 45593116 - 45593168
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  45593116 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 45593168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 45596783 - 45596835
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  45596783 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 45596835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 45600450 - 45600502
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  45600450 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 45600502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 45604117 - 45604169
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  45604117 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 45604169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 45607784 - 45607836
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  45607784 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 45607836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 45611451 - 45611503
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  45611451 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 45611503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 45615118 - 45615170
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  45615118 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 45615170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 6e-16; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 181 - 232
Target Start/End: Complemental strand, 49885443 - 49885392
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaatag 232  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  49885443 gatacatcaattattgaatgaatctaaaaaattaattttttcttataaatag 49885392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 45010834 - 45010887
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||||||||| ||||||||||||||||| | ||||||||||||||    
T  45010834 gatacatcaattattcaataaatctaaaaaattaattttctcttataaatagga 45010887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 5177851 - 5177902
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||| |||||| ||||||||||||||||    
T  5177851 tacatcaattattgaatgaatctaaaaagttaattttttcttataaatagga 5177902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 12747782 - 12747834
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||||||||| || ||||||||||||||| |||| ||||||||||||||||    
T  12747782 atacatcaattactcgatgaatctaaaaaatcaattttttcttataaatagga 12747834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 33371945 - 33371997
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||||| ||||||    
T  33371945 atacatcaactattcaatgaatcaaaaaaataaattatttcttatatatagga 33371997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 27108550 - 27108609
Alignment:
Q  176 gatcggatacatcaattattcaatgaatctaaaaaattaatt-atttcttataaatagga 234  Q
    |||||||||||| ||||||| ||||||| ||||||||||||| |||| ||||||||||||    
T  27108550 gatcggatacataaattatttaatgaatttaaaaaattaattgattttttataaatagga 27108609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 43449022 - 43448968
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaataggat 235  Q
    |||| |||||||| |||||||||||||||||| || | |||||||||||||||||    
T  43449022 gatatatcaattactcaatgaatctaaaaaatcaactttttcttataaataggat 43448968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 8987792 - 8987743
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    |||||| | |||||||||| |||||||||||||||||||| |||||||||    
T  8987792 atacataagttattcaatgcatctaaaaaattaattatttattataaata 8987743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 51723441 - 51723388
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaataggat 235  Q
    |||||| ||||| |||||||||||||||||| || | |||||||||||||||||    
T  51723441 atacattaattactcaatgaatctaaaaaatcaactttttcttataaataggat 51723388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 19649664 - 19649716
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||||||||| |||||||||||||||||| || | |||||| |||||||||    
T  19649664 atacatcaattactcaatgaatctaaaaaatcaaatgtttcttgtaaatagga 19649716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 48593227 - 48593279
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||| |||||||||||||||||||||||||| || |||||| || ||||||    
T  48593227 atacataaattattcaatgaatctaaaaaattacttgtttcttgtatatagga 48593279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 4980069 - 4980111
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttctt 224  Q
    ||||| || |||||||||||||||||||||| |||||||||||    
T  4980069 atacaccagttattcaatgaatctaaaaaatgaattatttctt 4980111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 211
Target Start/End: Complemental strand, 19996100 - 19996070
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaa 211  Q
    |||||||||||||||||||||||||||||||    
T  19996100 gatacatcaattattcaatgaatctaaaaaa 19996070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 44664246 - 44664200
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttata 227  Q
    ||||||| |||||||||||||| ||||||||| |||||||| |||||    
T  44664246 gatacattaattattcaatgaacctaaaaaatcaattattttttata 44664200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 52865015 - 52864965
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    ||||||||||||| |||||||||||||||| |||| | ||||| |||||||    
T  52865015 gatacatcaattactcaatgaatctaaaaagttaaatttttctcataaata 52864965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 54537507 - 54537453
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaataggat 235  Q
    ||||||||||||| ||||||||||| |||| | || | |||||||||||||||||    
T  54537507 gatacatcaattactcaatgaatcttaaaagtcaaatttttcttataaataggat 54537453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 28043451 - 28043500
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    |||||| |||||||||||||||||||| ||| |||  |||||||||||||    
T  28043451 atacattaattattcaatgaatctaaataatcaatagtttcttataaata 28043500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 229
Target Start/End: Complemental strand, 29290847 - 29290794
Alignment:
Q  176 gatcggatacatcaattattcaatgaatctaaaaaattaattatttcttataaa 229  Q
    |||| ||||||||| || ||||||||||||||||| | |||| |||||||||||    
T  29290847 gatcagatacatcagttgttcaatgaatctaaaaagtgaattttttcttataaa 29290794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 29457903 - 29457846
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaataggattgga 239  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| |||||| ||||    
T  29457903 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggactgga 29457846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 29457925 - 29457974
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatag 232  Q
    ||||||||| ||| |||||||||||||| |||| | ||||||||||||||    
T  29457925 tacatcaatcattgaatgaatctaaaaagttaactttttcttataaatag 29457974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 32711286 - 32711315
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaa 210  Q
    ||||||||||||||||||||||||||||||    
T  32711286 gatacatcaattattcaatgaatctaaaaa 32711315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 230
Target Start/End: Complemental strand, 42225626 - 42225577
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaat 230  Q
    |||||||  ||||||||||| |||||||||||||||| |||||| |||||    
T  42225626 gatacatacattattcaatgtatctaaaaaattaattttttcttgtaaat 42225577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 43449043 - 43449096
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaataggat 235  Q
    |||||||| |||| ||||||| | ||||||| || |||||||||||||||||||    
T  43449043 atacatcatttatacaatgaaccaaaaaaatcaaatatttcttataaataggat 43449096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 379133 - 379081
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||| ||||||| |||| |||||||||||||||| | |||| |||||||||    
T  379133 atacataaattatttaatgtatctaaaaaattaattgtctcttgtaaatagga 379081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 28406530 - 28406478
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||| |||||||||| ||||||||||| | |||| |||||| |||||||||    
T  28406530 atacattaattattcaacgaatctaaaaagtcaattgtttcttgtaaatagga 28406478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 33371923 - 33371875
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    ||||||||||||| ||| ||| ||||||||||| | |||||||||||||    
T  33371923 tacatcaattattgaataaatttaaaaaattaactttttcttataaata 33371875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 33808395 - 33808446
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||||||||||||||| ||| |||||| | |||| ||||||||||||||||    
T  33808395 atacatcaattattcaattaatttaaaaagtcaatt-tttcttataaatagga 33808446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 49944897 - 49944844
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||||||||||||||||||||||||||| |||| | ||||||||||||||||    
T  49944897 gatacatcaattattcaatgaatctaaaaagttaaatttttcttataaatagga 49944844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 243
Target Start/End: Original strand, 15343022 - 15343083
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaataggattggatgaa 243  Q
    |||||||| |||| ||||||||| ||||||| || ||||||||||||||||||| |||||||    
T  15343022 atacatcatttatgcaatgaatcaaaaaaatcaaatatttcttataaataggataggatgaa 15343083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 34146889 - 34146942
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaataggat 235  Q
    |||||| |||||||||||||||| ||||||| |||| |||||||||||||||||    
T  34146889 atacattaattattcaatgaatcaaaaaaatcaattttttcttataaataggat 34146942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 38738015 - 38738068
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||||| |||| | ||||||||||||||||    
T  38738015 gatacatcaattactcaatgaatctaaaaagttaaatttttcttataaatagga 38738068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 49184302 - 49184238
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaataggattggatgaaata 246  Q
    |||||| ||||||| ||||||| |||||||| |||||||| |||||||||||| |||| ||||||    
T  49184302 atacattaattattaaatgaatttaaaaaataaattattttttataaataggactggaggaaata 49184238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 43929431 - 43929482
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||| |||| | ||||||||||||||||    
T  43929431 tacatcaattattgaatgaatctaaaaagttaactttttcttataaatagga 43929482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 45849004 - 45848953
Alignment:
Q  180 ggatacatcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    |||||||||||||||| ||||||| |||||| |||||| |||||||||||||    
T  45849004 ggatacatcaattattaaatgaatataaaaagttaattgtttcttataaata 45848953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 519917 - 519971
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaataggat 235  Q
    ||||||||||||| |||||||||||||||| ||||   |||||||||||||||||    
T  519917 gatacatcaattactcaatgaatctaaaaagttaaaattttcttataaataggat 519971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 231
Target Start/End: Original strand, 44939150 - 44939200
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    ||||||||||||| |||||||||||||||||| |||| | |||||||||||    
T  44939150 gatacatcaattactcaatgaatctaaaaaatcaattttctcttataaata 44939200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 25021294 - 25021245
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    ||||||||||||||||||||||||||||| | | || |||||||||||||    
T  25021294 atacatcaattattcaatgaatctaaaaagtcatttgtttcttataaata 25021245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 25021313 - 25021366
Alignment:
Q  179 cggatacatcaattattcaatgaatctaaaaaattaattatttcttataaatag 232  Q
    ||||||||||||||||||||| |||||||||| | |||| |||||| |||||||    
T  25021313 cggatacatcaattattcaataaatctaaaaagtcaattgtttcttgtaaatag 25021366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 38040360 - 38040413
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||||| | || | ||||||||||||||||    
T  38040360 gatacatcaattaatcaatgaatctaaaaagtcaaatttttcttataaatagga 38040413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 5368852 - 5368904
Alignment:
Q  179 cggatacatcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    ||||||||| |||||||||||| ||||||||| |||||| || ||||||||||    
T  5368852 cggatacattaattattcaatgcatctaaaaagttaatttttgcttataaata 5368904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 6793656 - 6793608
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    ||||| ||||||||||||||| ||||||||||| | |||||||||||||    
T  6793656 tacattaattattcaatgaatttaaaaaattaactttttcttataaata 6793608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 23923458 - 23923406
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaatagg 233  Q
    |||||||||||||||||| ||||||||||| | || | |||||||||||||||    
T  23923458 gatacatcaattattcaacgaatctaaaaattcaaatttttcttataaatagg 23923406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 50155383 - 50155435
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||||||||| |||||||||||||||| | || | ||||||||||||||||    
T  50155383 atacatcaattactcaatgaatctaaaaagtcaactttttcttataaatagga 50155435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 186 - 241
Target Start/End: Complemental strand, 26823196 - 26823141
Alignment:
Q  186 atcaattattcaatgaatctaaaaaattaattatttcttataaataggattggatg 241  Q
    |||||||||||||| ||| |||||| |||||| ||| ||||||||||||| |||||    
T  26823196 atcaattattcaataaatttaaaaagttaattttttattataaataggatcggatg 26823141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 34890264 - 34890315
Alignment:
Q  179 cggatacatcaattattcaatgaatctaaaaaattaattatttcttataaat 230  Q
    ||||||||| ||||||||||||||||||||| | || || ||||||||||||    
T  34890264 cggatacattaattattcaatgaatctaaaatagtatttttttcttataaat 34890315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 47678341 - 47678392
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| ||||||||| |||| |||| | ||||||||||||||||    
T  47678341 tacatcaattattgaatgaatctcaaaagttaaatttttcttataaatagga 47678392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 47844596 - 47844545
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| ||||||||| |||| |||| | ||||||||||||||||    
T  47844596 tacatcaattattgaatgaatctcaaaagttaaatttttcttataaatagga 47844545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 229
Target Start/End: Complemental strand, 11386216 - 11386170
Alignment:
Q  184 acatcaattattcaatgaatctaa-aaaattaattatttcttataaa 229  Q
    |||||||||||||||||||||||| ||||| |||| |||||||||||    
T  11386216 acatcaattattcaatgaatctaaaaaaatcaattttttcttataaa 11386170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 38590150 - 38590203
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaa--ttatttcttataaatag 232  Q
    ||||||||||||| |||||||||||||||| ||||  || ||||||||||||||    
T  38590150 gatacatcaattactcaatgaatctaaaaagttaattttttttcttataaatag 38590203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 1811276 - 1811321
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttata 227  Q
    |||||||||||||| |||||||||||||||| |||| || ||||||    
T  1811276 atacatcaattatttaatgaatctaaaaaatgaatttttgcttata 1811321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 7375553 - 7375606
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||| |||||  ||||||||||||||| | |||| ||||||||||||||||    
T  7375553 gatacattaattacacaatgaatctaaaaagtcaattttttcttataaatagga 7375606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 8971291 - 8971242
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    |||||| ||||| ||||||||||||| || |||||| |||||||||||||    
T  8971291 atacattaattactcaatgaatctaacaacttaattttttcttataaata 8971242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 15285521 - 15285570
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    |||||||||||||||||| |||||||||||| || | | |||||||||||    
T  15285521 atacatcaattattcaatcaatctaaaaaatcaagtgtctcttataaata 15285570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 24305749 - 24305802
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| ||||| ||| ||||||||||| | |||||| |||||||||    
T  24305749 gatacatcaattactcaataaatttaaaaaattaaatttttcttctaaatagga 24305802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 29892214 - 29892267
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||| |||||||||| |||||||||||||| | |||| |||| |||||||||||    
T  29892214 gatatatcaattattgaatgaatctaaaaagtcaattgtttcctataaatagga 29892267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 33018303 - 33018254
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatag 232  Q
    |||||||||||| |||||||| |||||||| || | ||||||||||||||    
T  33018303 tacatcaattatgcaatgaatttaaaaaatcaaatgtttcttataaatag 33018254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 232
Target Start/End: Complemental strand, 34662744 - 34662695
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatag 232  Q
    ||||||||||||| |||||||||||||| |||| | ||| ||||||||||    
T  34662744 tacatcaattattgaatgaatctaaaaagttaacttttttttataaatag 34662695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 50105725 - 50105684
Alignment:
Q  176 gatcggatacatcaattattcaatgaatctaaaaaattaatt 217  Q
    |||| |||||||  ||||||||||||||||||||||||||||    
T  50105725 gatcagatacattgattattcaatgaatctaaaaaattaatt 50105684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 26760236 - 26760184
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||||| |||||||||||||| ||||| | || | ||||||||||||||||    
T  26760236 atacatcatttattcaatgaatcaaaaaagtcaaatgtttcttataaatagga 26760184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 26924298 - 26924350
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||||| |||||||||||||| ||||| | || | ||||||||||||||||    
T  26924298 atacatcatttattcaatgaatcaaaaaagtcaaatgtttcttataaatagga 26924350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 28359007 - 28359059
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||| ||||||||||||||| |||||| | | || ||||||||||||||||    
T  28359007 atacattaattattcaatgaatttaaaaattcatttttttcttataaatagga 28359059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 184 - 224
Target Start/End: Complemental strand, 35533609 - 35533569
Alignment:
Q  184 acatcaattattcaatgaatctaaaaaattaattatttctt 224  Q
    |||||||||||||||| |||||||||||| ||| |||||||    
T  35533609 acatcaattattcaataaatctaaaaaataaataatttctt 35533569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 37515175 - 37515227
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||| ||||| | |||||||||||||| |||| | ||||||||||||||||    
T  37515175 atacattaattacttaatgaatctaaaaagttaaatttttcttataaatagga 37515227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 47678319 - 47678267
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  47678319 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 47678267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 30191959 - 30191907
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||||||||| |||||||||||||||||| |||| ||||||||||||||||    
T  30191959 atacatcaattactcaatgaatctaaaaaatcaattttttcttataaatagga 30191907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 3043854 - 3043803
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| ||||||||||||||||||| | ||||||||||||||||    
T  3043854 tacatcaattattgaatgaatctaaaaaattaactttttcttataaatagga 3043803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 20745417 - 20745468
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| ||||||||||||||||||| | ||||||||||||||||    
T  20745417 tacatcaattattgaatgaatctaaaaaattaactttttcttataaatagga 20745468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 24100823 - 24100776
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataa 228  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||    
T  24100823 gatacattaattattcaatgaatctaaaaagttaattatttcttataa 24100776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 24100888 - 24100935
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataa 228  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||    
T  24100888 gatacattaattattcaatgaatctaaaaagttaattatttcttataa 24100935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 43117939 - 43117989
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatag 232  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||||||||    
T  43117939 atacatcaattattcaatgaatgtaaaaaatcaattttttcttataaatag 43117989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 21554193 - 21554250
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaataggattgga 239  Q
    |||||| ||||| |||||||||||||||||| || | |||||||||||||||||||||    
T  21554193 atacattaattactcaatgaatctaaaaaatcaactttttcttataaataggattgga 21554250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 26066435 - 26066382
Alignment:
Q  179 cggatacatcaattattcaatgaatctaaaaaattaattatttcttataaatag 232  Q
    |||||||||||||||||||||||||||  ||| | |||||||||||||||||||    
T  26066435 cggatacatcaattattcaatgaatcttgaaagtcaattatttcttataaatag 26066382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 41116626 - 41116573
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||||| |||| | ||||||||||||||||    
T  41116626 gatacatcaattactcaatgaatctaaaaagttaaatttttcttataaatagga 41116573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 55190750 - 55190803
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||||| ||||||| |||||||| |||| ||||||||||||||||    
T  55190750 gatacatcaattattgaatgaatataaaaaatcaattttttcttataaatagga 55190803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 45828500 - 45828552
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||| ||||| |||||||||||||||||| |||| ||||||||||||||||    
T  45828500 atacattaattactcaatgaatctaaaaaatcaattttttcttataaatagga 45828552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 53225729 - 53225781
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||| |||||||||||||||||||||| | |||| ||||||||||||||||    
T  53225729 atacattaattattcaatgaatctaaaaagtcaattttttcttataaatagga 53225781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 2643670 - 2643619
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||| |||||||||||||| ||||||| | |||||||||||||||||||||    
T  2643670 tacataaattattcaatgaaactaaaaagtcaattatttcttataaatagga 2643619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 20459326 - 20459377
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||| |||| | ||||||||||||||||    
T  20459326 tacatcaattattgaatgaatctaaaaagttaactttttcttataaatagga 20459377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 27587330 - 27587377
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataa 228  Q
    ||||||| |||||||||||||| ||||||||| |||||||||||||||    
T  27587330 gatacattaattattcaatgaacctaaaaaataaattatttcttataa 27587377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 42804318 - 42804267
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||| |||| | ||||||||||||||||    
T  42804318 tacatcaattattgaatgaatctaaaaagttaactttttcttataaatagga 42804267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 43020818 - 43020767
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||| |||| | ||||||||||||||||    
T  43020818 tacatcaattattgaatgaatctaaaaagttaactttttcttataaatagga 43020767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 47866098 - 47866047
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||| |||| | ||||||||||||||||    
T  47866098 tacatcaattattgaatgaatctaaaaagttaactttttcttataaatagga 47866047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 232
Target Start/End: Complemental strand, 16412293 - 16412247
Alignment:
Q  186 atcaattattcaatgaatctaaaaaattaattatttcttataaatag 232  Q
    ||||||||||||||||||||||||| | |||| ||||||||||||||    
T  16412293 atcaattattcaatgaatctaaaaagtcaattttttcttataaatag 16412247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 42169128 - 42169180
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||||||||||||||| |||||||||| | || | ||||||||||||||||    
T  42169128 atacatcaattattcaataaatctaaaaagtcaaatttttcttataaatagga 42169180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 48361115 - 48361063
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||||||||| |||||||||||||||| | || | ||||||||||||||||    
T  48361115 atacatcaattactcaatgaatctaaaaagtcaaatttttcttataaatagga 48361063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 20956952 - 20956901
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||||||||   ||| ||||||||||||    
T  20956952 tacatcaattattgaatgaatctaaaaaattaacatttttttataaatagga 20956901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 36196449 - 36196496
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataa 228  Q
    ||||||| |||||||| ||||||||||||||| |||| ||||||||||    
T  36196449 gatacattaattattctatgaatctaaaaaatcaattttttcttataa 36196496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 3043876 - 3043926
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatag 232  Q
    ||||||||| ||||||||||||| ||||||| |||| ||||||||| ||||    
T  3043876 atacatcaactattcaatgaatcaaaaaaataaattgtttcttatatatag 3043926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 3345396 - 3345446
Alignment:
Q  176 gatcggatacatcaattattcaatgaatctaaaaaattaattatttcttat 226  Q
    |||| |||||||||||||||||||||| ||||||| | |||||| ||||||    
T  3345396 gatcagatacatcaattattcaatgaacctaaaaagtgaattatgtcttat 3345446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 29686485 - 29686531
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataa 228  Q
    |||||| |||||| |||||||| ||||||||||||| ||||||||||    
T  29686485 atacattaattatacaatgaatttaaaaaattaattgtttcttataa 29686531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 32645575 - 32645621
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataa 228  Q
    |||||||||||||||||||||||||||| |||| || || |||||||    
T  32645575 atacatcaattattcaatgaatctaaaacattattttttgcttataa 32645621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 34226450 - 34226400
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatag 232  Q
    ||||||||||||||||||||||| ||||| | |||| ||| ||||||||||    
T  34226450 atacatcaattattcaatgaatcaaaaaagtaaattgtttattataaatag 34226400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 231
Target Start/End: Original strand, 44111829 - 44111879
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    ||||||||||||| |||||||||||||||| | || | |||||||||||||    
T  44111829 gatacatcaattactcaatgaatctaaaaagtcaactttttcttataaata 44111879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 36132698 - 36132641
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaataggattgga 239  Q
    |||||||| |||| ||||||||| ||||| | || |||||||||||||||||| ||||    
T  36132698 atacatcatttatacaatgaatcaaaaaagtcaaatatttcttataaataggactgga 36132641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 48195954 - 48195901
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||| ||||||| ||||||||| |||||| ||| || ||||||||||||||||    
T  48195954 gatacgtcaattactcaatgaatttaaaaagttagttttttcttataaatagga 48195901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 55292197 - 55292250
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaataggat 235  Q
    |||||| ||||||| |||| ||||||||||| |||| |||||| ||||||||||    
T  55292197 atacataaattatttaatgtatctaaaaaataaattgtttcttgtaaataggat 55292250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 210
Target Start/End: Complemental strand, 1140928 - 1140900
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaa 210  Q
    |||||||||||||||||||||||||||||    
T  1140928 atacatcaattattcaatgaatctaaaaa 1140900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 4698708 - 4698760
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||| |||||||||||| ||||||||||| |||| ||| || |||||||||    
T  4698708 atacataaattattcaatgtatctaaaaaatcaattgtttattgtaaatagga 4698760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 8347708 - 8347656
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||||||| | |||||||||||||||| | || | ||||||||||||||||    
T  8347708 atacatcaatcactcaatgaatctaaaaagtcaaatttttcttataaatagga 8347656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 8826779 - 8826827
Alignment:
Q  186 atcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||||||||||||||| | |||| |||| || ||||||||    
T  8826779 atcaattattcaatgaatctaaaaagtaaattttttcatacaaatagga 8826827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 20459304 - 20459252
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  20459304 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 20459252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 27841893 - 27841842
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaataggat 235  Q
    ||||| ||||||| ||||||||||||||||||| | ||| |||||||||||||    
T  27841893 tacattaattattgaatgaatctaaaaaattaact-ttttttataaataggat 27841842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 37991549 - 37991497
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||||| |||| ||||||||| ||||| |||| | ||||||||||||||||    
T  37991549 atacatcatttatacaatgaatcaaaaaatttaaatgtttcttataaatagga 37991497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 39993123 - 39993171
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaat 230  Q
    |||||| |||||||||||||||||||||| ||| || || |||||||||    
T  39993123 atacattaattattcaatgaatctaaaaagttattttttacttataaat 39993171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 43020840 - 43020892
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  43020840 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 43020892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 47866120 - 47866172
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  47866120 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 47866172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 48373480 - 48373428
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaataggat 235  Q
    ||||| |||||||||||||| || |||||| |||| |||||| ||||||||||    
T  48373480 tacataaattattcaatgaacctcaaaaatcaattgtttcttgtaaataggat 48373428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 182 - 241
Target Start/End: Original strand, 31903035 - 31903094
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaataggattggatg 241  Q
    |||||| |||||||||||||| |||||||||||||||||| ||||||  |||||||||||    
T  31903035 atacattaattattcaatgaacctaaaaaattaattattttttataataaggattggatg 31903094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 8566165 - 8566218
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||||||| || | ||||||||||||||||    
T  8566165 gatacatcaattactcaatgaatctaaaaaatcaaatttttcttataaatagga 8566218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 36245460 - 36245513
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||||| | |||| ||||||||||||||||    
T  36245460 gatacatcaattactcaatgaatctaaaaagtcaattttttcttataaatagga 36245513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 41850659 - 41850610
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    |||||| ||||||||||||||||||||||||||| | |||||||||||||    
T  41850659 atacattaattattcaatgaatctaaaaaattaactttttcttataaata 41850610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 4826824 - 4826768
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaataggattgga 239  Q
    ||||||||||||| |||||||||||||| |||| | |||||||||||||||| ||||    
T  4826824 tacatcaattattgaatgaatctaaaaagttaactttttcttataaataggactgga 4826768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 32811798 - 32811842
Alignment:
Q  186 atcaattattcaatgaatctaaaaaattaattatttcttataaat 230  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||    
T  32811798 atcaattactcaatgaatctaaaaaattaattttttcttataaat 32811842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 27231919 - 27231970
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||| |||| | ||||||||||||||||    
T  27231919 tacatcaattattgaatgaatctaaaaagttaactttttcttataaatagga 27231970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 32811463 - 32811514
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||| | ||||||||||||||||||| | ||||||||||||||||    
T  32811463 tacatcaattactgaatgaatctaaaaaattaactttttcttataaatagga 32811514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 28677401 - 28677455
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaataggat 235  Q
    ||||||||||||| ||||| |||||||||| | |||| |||||||||||||||||    
T  28677401 gatacatcaattactcaataaatctaaaaagtcaattttttcttataaataggat 28677455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 31227556 - 31227507
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    ||||||||| |||| ||||||||||||||||||| | |||||||||||||    
T  31227556 atacatcaactattgaatgaatctaaaaaattaactttttcttataaata 31227507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 235
Target Start/End: Complemental strand, 32811441 - 32811388
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaataggat 235  Q
    ||||||||||||||||||||||| ||||| | |||| ||||||||| |||||||    
T  32811441 atacatcaattattcaatgaatcaaaaaagtaaattgtttcttatatataggat 32811388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 28020064 - 28020012
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||||||||||    
T  28020064 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttataaatagga 28020012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 45123329 - 45123376
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataa 228  Q
    ||||||||| |||| ||||||||| ||||| |||||||||||||||||    
T  45123329 gatacatcacttatacaatgaatcaaaaaagttaattatttcttataa 45123376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 31227577 - 31227631
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaataggatt 236  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||||    
T  31227577 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatataggatt 31227631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 10007660 - 10007713
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||| |||||| ||||||||||||||| | || | ||||||||||||||||    
T  10007660 gatacattaattatacaatgaatctaaaaagtcaactttttcttataaatagga 10007713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 11668099 - 11668152
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| ||||||||| |||||| | || | ||||||||||||||||    
T  11668099 gatacatcaattaatcaatgaatgtaaaaagtcaaatttttcttataaatagga 11668152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 16861575 - 16861530
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttata 227  Q
    ||||||||||||||||||||||||||||| | |||| ||| |||||    
T  16861575 atacatcaattattcaatgaatctaaaaagtcaattgttttttata 16861530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 30869270 - 30869323
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| |||||||||||||||| | ||   ||||||||||||||||    
T  30869270 gatacatcaattactcaatgaatctaaaaagtcaaaattttcttataaatagga 30869323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 40142857 - 40142910
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||| |||||| |||| |||||||||||| |||| ||||||||| ||||||    
T  40142857 gatacattaattatacaataaatctaaaaaatcaattttttcttatacatagga 40142910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Complemental strand, 1366658 - 1366606
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  1366658 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 1366606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 231
Target Start/End: Original strand, 1366680 - 1366728
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    ||||||||||||| |||||||||||||| |||| | ||||| |||||||    
T  1366680 tacatcaattattgaatgaatctaaaaagttaactttttctgataaata 1366728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 2610250 - 2610202
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaat 230  Q
    |||||||||||| ||||||||| |||||||| || | ||||||||||||    
T  2610250 atacatcaattactcaatgaatttaaaaaatcaaatttttcttataaat 2610202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 4826846 - 4826898
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||| ||||| | |||| ||||||||| ||||||    
T  4826846 atacatcaactattcaatgaatcaaaaaagtaaattgtttcttatatatagga 4826898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 29365706 - 29365758
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||| ||||| |||||||||||||||| | |||| ||||||||| ||||||    
T  29365706 atacattaattactcaatgaatctaaaaagtcaattttttcttatatatagga 29365758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 210
Target Start/End: Complemental strand, 40362033 - 40362005
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaa 210  Q
    |||||||||||||||||||||||||||||    
T  40362033 atacatcaattattcaatgaatctaaaaa 40362005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 45441520 - 45441568
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaa 229  Q
    |||||| |||||||||| |||||||||||| |||||| ||| |||||||    
T  45441520 gatacaccaattattcattgaatctaaaaagttaatttttttttataaa 45441568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 7649862 - 7649813
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaata 231  Q
    |||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  7649862 atacatcaattattcaatgaatctaaaaagataattatttattataaata 7649813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 234
Target Start/End: Complemental strand, 2810141 - 2810090
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||| ||||||||||||||||||| | ||| ||||||||||||    
T  2810141 tacatcaattattgaatgaatctaaaaaattaacttttttttataaatagga 2810090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 1837045 - 1837095
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaatagg 233  Q
    ||||||||||||| ||| ||||||||||||||| | |||||||||||||||    
T  1837045 tacatcaattattgaataaatctaaaaaattaactttttcttataaatagg 1837095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 1158330 - 1158382
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||||||||||||| || |||||| | ||||||||||| |||||||||    
T  1158330 atacatcaattattcaatgtatttaaaaagtcaattatttcttgtaaatagga 1158382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 10283379 - 10283431
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||||||||| ||||| ||| ||||||||||||| || |||||||||||||    
T  10283379 atacatcaattactcaataaatttaaaaaattaatttttgcttataaatagga 10283431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 12450414 - 12450366
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaat 230  Q
    ||||||||||||||||||||||| ||||| ||||  |||||||||||||    
T  12450414 atacatcaattattcaatgaatccaaaaagttaaacatttcttataaat 12450366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 33128889 - 33128849
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattattt 221  Q
    ||||||| ||||||| |||||||||||||||||||||||||    
T  33128889 gatacattaattattaaatgaatctaaaaaattaattattt 33128849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 232
Target Start/End: Complemental strand, 3064947 - 3064896
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataaatag 232  Q
    ||||||| |||||| |||||||||||||||  ||||| ||||||||||||||    
T  3064947 gatacattaattatacaatgaatctaaaaagataattttttcttataaatag 3064896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 9343184 - 9343137
Alignment:
Q  181 gatacatcaattattcaatgaatctaaaaaattaattatttcttataa 228  Q
    ||||||| |||||||| ||||||||||||| | |||||||||||||||    
T  9343184 gatacattaattattctatgaatctaaaaagtcaattatttcttataa 9343137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 766512 - 766564
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||| ||||||| |||| ||||||||||| |||||| |||| |||||||||    
T  766512 atacataaattatttaatgtatctaaaaaataaattatctcttgtaaatagga 766564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 2810163 - 2810215
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    ||||||||| ||||||||||||  ||||| | |||||||||||||| ||||||    
T  2810163 atacatcaactattcaatgaatgaaaaaagtaaattatttcttatatatagga 2810215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 2937134 - 2937090
Alignment:
Q  191 ttattcaatgaatctaaaaaattaattatttcttataaataggat 235  Q
    |||| ||||||||||||||| |||| | |||||||||||||||||    
T  2937134 ttatgcaatgaatctaaaaagttaaatgtttcttataaataggat 2937090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 7649888 - 7649935
Alignment:
Q  186 atcaattattcaatgaatct--aaaaaattaattatttcttataaata 231  Q
    |||||||||||||||||| |  |||||||||||||||||||| |||||    
T  7649888 atcaattattcaatgaatttaaaaaaaattaattatttcttagaaata 7649935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 8646764 - 8646816
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaataggat 235  Q
    ||||||||||||| ||| ||||||||||  ||| | |||||||||||||||||    
T  8646764 tacatcaattattaaataaatctaaaaagataactttttcttataaataggat 8646816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 234
Target Start/End: Original strand, 28630838 - 28630890
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataaatagga 234  Q
    |||||| | |||| ||||||||||||||| | |||| ||||||||||||||||    
T  28630838 atacataatttatgcaatgaatctaaaaagtcaattgtttcttataaatagga 28630890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 16569 - 16513
Alignment:
Q  183 tacatcaattattcaatgaatctaaaaaattaattatttcttataaataggattgga 239  Q
    ||||||||||||| ||||||||||||||||||| | |||||| ||||||||| ||||    
T  16569 tacatcaattattgaatgaatctaaaaaattaactttttcttgtaaataggactgga 16513  T

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Target: scaffold0027 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 5499 - 5545
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaaattaattatttcttataa 228  Q
    |||||| |||||||||||||||||||||| | |||||||||||||||    
T  5499 atacattaattattcaatgaatctaaaaagtcaattatttcttataa 5545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 182 - 210
Target Start/End: Original strand, 423333 - 423361
Alignment:
Q  182 atacatcaattattcaatgaatctaaaaa 210  Q
    |||||||||||||||||||||||||||||    
T  423333 atacatcaattattcaatgaatctaaaaa 423361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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