View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8952_low_14 (Length: 542)

Name: NF8952_low_14
Description: NF8952
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8952_low_14
NF8952_low_14
[»] chr3 (72 HSPs)
chr3 (37-533)||(11611865-11612369)
chr3 (37-99)||(5499413-5499475)
chr3 (37-99)||(12761520-12761582)
chr3 (39-99)||(4844519-4844579)
chr3 (39-99)||(4870215-4870275)
chr3 (37-99)||(2667870-2667932)
chr3 (37-99)||(10499115-10499177)
chr3 (37-99)||(14186656-14186717)
chr3 (37-99)||(27093367-27093429)
chr3 (37-99)||(30311314-30311376)
chr3 (37-99)||(37788471-37788533)
chr3 (40-96)||(32651447-32651503)
chr3 (37-95)||(14339622-14339680)
chr3 (37-99)||(16354898-16354960)
chr3 (37-99)||(17554779-17554841)
chr3 (37-99)||(31520611-31520673)
chr3 (37-99)||(42799754-42799815)
chr3 (37-99)||(46518636-46518698)
chr3 (37-99)||(53412953-53413015)
chr3 (37-97)||(7975428-7975488)
chr3 (37-97)||(27923049-27923109)
chr3 (37-99)||(10445145-10445208)
chr3 (40-99)||(16991550-16991609)
chr3 (37-76)||(20501727-20501766)
chr3 (40-99)||(21960559-21960618)
chr3 (45-99)||(203098-203152)
chr3 (37-99)||(2597226-2597288)
chr3 (37-99)||(3055002-3055064)
chr3 (37-99)||(4222149-4222211)
chr3 (41-99)||(8051222-8051280)
chr3 (37-99)||(8075133-8075195)
chr3 (37-99)||(8170680-8170742)
chr3 (37-99)||(13808891-13808953)
chr3 (37-99)||(19154639-19154701)
chr3 (43-97)||(31510730-31510784)
chr3 (37-99)||(33270478-33270540)
chr3 (37-99)||(36720389-36720451)
chr3 (37-99)||(38550410-38550472)
chr3 (37-99)||(40268497-40268558)
chr3 (41-95)||(47236981-47237035)
chr3 (37-99)||(51903884-51903946)
chr3 (37-99)||(17554458-17554522)
chr3 (44-97)||(18319181-18319234)
chr3 (37-89)||(17108904-17108956)
chr3 (51-99)||(31788990-31789038)
chr3 (41-77)||(47279414-47279450)
chr3 (37-96)||(8368805-8368864)
chr3 (41-88)||(39976441-39976488)
chr3 (61-99)||(9832505-9832543)
chr3 (37-83)||(10828739-10828785)
chr3 (37-99)||(15034353-15034414)
chr3 (37-99)||(15048067-15048129)
chr3 (37-99)||(19716205-19716267)
chr3 (37-99)||(26871510-26871572)
chr3 (37-83)||(27259185-27259231)
chr3 (37-99)||(30510205-30510267)
chr3 (37-83)||(37051300-37051346)
chr3 (37-79)||(39253725-39253767)
chr3 (53-99)||(42430343-42430388)
chr3 (37-99)||(47810750-47810812)
chr3 (54-95)||(26411557-26411598)
chr3 (37-74)||(52769989-52770026)
chr3 (41-77)||(16212982-16213018)
chr3 (51-99)||(19341809-19341857)
chr3 (51-99)||(26481935-26481983)
chr3 (37-77)||(28703410-28703450)
chr3 (51-95)||(28928899-28928943)
chr3 (54-90)||(40130123-40130159)
chr3 (37-89)||(44069776-44069828)
chr3 (37-77)||(44743861-44743901)
chr3 (48-96)||(45699945-45699993)
chr3 (37-77)||(54990732-54990772)
[»] chr2 (47 HSPs)
chr2 (162-288)||(14455055-14455181)
chr2 (37-99)||(37480083-37480145)
chr2 (37-99)||(39715000-39715062)
chr2 (37-99)||(40416396-40416458)
chr2 (37-99)||(42327401-42327463)
chr2 (41-96)||(12994386-12994441)
chr2 (37-99)||(21213777-21213839)
chr2 (37-99)||(29503279-29503341)
chr2 (37-97)||(23052529-23052589)
chr2 (37-96)||(12086135-12086194)
chr2 (41-99)||(29197386-29197444)
chr2 (37-99)||(34041594-34041656)
chr2 (37-99)||(42602562-42602624)
chr2 (41-96)||(42860359-42860414)
chr2 (37-99)||(42922422-42922485)
chr2 (37-99)||(3001387-3001449)
chr2 (37-99)||(16918584-16918646)
chr2 (37-99)||(19244117-19244179)
chr2 (37-87)||(28846711-28846761)
chr2 (41-99)||(30359662-30359720)
chr2 (51-99)||(7799055-7799103)
chr2 (37-97)||(11251097-11251157)
chr2 (55-99)||(32106574-32106618)
chr2 (41-96)||(24191849-24191904)
chr2 (37-83)||(4262308-4262354)
chr2 (37-99)||(11062368-11062430)
chr2 (37-99)||(21195682-21195744)
chr2 (41-99)||(37755981-37756039)
chr2 (51-99)||(1729824-1729872)
chr2 (37-97)||(26482103-26482162)
chr2 (44-99)||(4438992-4439047)
chr2 (37-96)||(18259741-18259800)
chr2 (41-99)||(22999230-22999286)
chr2 (37-76)||(33582004-33582043)
chr2 (37-76)||(33839266-33839305)
chr2 (41-99)||(19016039-19016097)
chr2 (37-87)||(19322788-19322838)
chr2 (41-87)||(30410559-30410605)
chr2 (41-99)||(41908648-41908706)
chr2 (42-99)||(5147690-5147747)
chr2 (50-99)||(7667488-7667537)
chr2 (51-88)||(41504956-41504993)
chr2 (37-89)||(16814188-16814240)
chr2 (37-89)||(16853467-16853519)
chr2 (51-87)||(23230625-23230661)
chr2 (59-99)||(25931014-25931054)
chr2 (51-99)||(41202258-41202306)
[»] scaffold0003 (2 HSPs)
scaffold0003 (172-288)||(34298-34414)
scaffold0003 (172-288)||(40931-41040)
[»] chr7 (73 HSPs)
chr7 (162-288)||(13764039-13764165)
chr7 (37-99)||(22760871-22760933)
chr7 (37-95)||(7801192-7801250)
chr7 (41-99)||(23301612-23301670)
chr7 (37-99)||(26459416-26459478)
chr7 (41-96)||(21877819-21877874)
chr7 (37-99)||(15905680-15905741)
chr7 (41-99)||(23552126-23552184)
chr7 (37-99)||(43590915-43590977)
chr7 (37-99)||(48771946-48772008)
chr7 (40-97)||(11720969-11721026)
chr7 (36-99)||(15137561-15137624)
chr7 (37-99)||(5579240-5579302)
chr7 (37-99)||(19553462-19553523)
chr7 (41-99)||(25021345-25021403)
chr7 (37-99)||(30579343-30579405)
chr7 (37-99)||(39631852-39631914)
chr7 (37-99)||(41519270-41519332)
chr7 (37-99)||(43215192-43215254)
chr7 (45-99)||(45976937-45976991)
chr7 (38-99)||(42836008-42836069)
chr7 (40-99)||(3968651-3968710)
chr7 (37-96)||(14058264-14058323)
chr7 (37-96)||(14368292-14368351)
chr7 (37-88)||(25132384-25132435)
chr7 (37-99)||(5273596-5273658)
chr7 (37-99)||(18056781-18056843)
chr7 (37-99)||(30442496-30442558)
chr7 (37-99)||(31835200-31835262)
chr7 (41-99)||(39499729-39499787)
chr7 (37-89)||(8108599-8108651)
chr7 (39-99)||(21854556-21854616)
chr7 (39-99)||(23595737-23595797)
chr7 (51-99)||(36803647-36803695)
chr7 (39-99)||(37233580-37233640)
chr7 (37-99)||(41487370-41487429)
chr7 (19-99)||(25956279-25956360)
chr7 (41-99)||(3280495-3280553)
chr7 (37-99)||(4566434-4566496)
chr7 (37-99)||(17041018-17041080)
chr7 (37-99)||(18363704-18363766)
chr7 (41-99)||(18884415-18884473)
chr7 (37-99)||(20335837-20335899)
chr7 (37-99)||(29385749-29385811)
chr7 (37-99)||(38374605-38374667)
chr7 (37-99)||(43663101-43663163)
chr7 (37-99)||(45709714-45709776)
chr7 (37-99)||(48125181-48125242)
chr7 (40-89)||(11765044-11765093)
chr7 (42-99)||(22927484-22927541)
chr7 (51-99)||(2446316-2446364)
chr7 (51-99)||(20952169-20952217)
chr7 (37-96)||(21558139-21558198)
chr7 (15-87)||(33222390-33222464)
chr7 (15-99)||(33869427-33869513)
chr7 (41-84)||(48716303-48716346)
chr7 (41-87)||(7721389-7721435)
chr7 (37-99)||(24513805-24513867)
chr7 (37-99)||(25590619-25590681)
chr7 (37-87)||(25655234-25655284)
chr7 (45-99)||(27445004-27445058)
chr7 (37-99)||(27776180-27776242)
chr7 (37-99)||(35119391-35119453)
chr7 (37-99)||(37085555-37085617)
chr7 (41-99)||(42711966-42712024)
chr7 (41-99)||(44628193-44628251)
chr7 (45-86)||(27454744-27454785)
chr7 (40-81)||(42262104-42262145)
chr7 (37-97)||(2962469-2962529)
chr7 (37-97)||(7744118-7744178)
chr7 (42-86)||(28236592-28236636)
chr7 (40-99)||(33460431-33460491)
chr7 (51-99)||(35513474-35513522)
[»] chr6 (28 HSPs)
chr6 (172-288)||(27446318-27446427)
chr6 (37-88)||(6385881-6385932)
chr6 (37-99)||(10338180-10338242)
chr6 (37-99)||(33549112-33549174)
chr6 (37-99)||(34444811-34444873)
chr6 (37-97)||(12234513-12234573)
chr6 (45-99)||(12188317-12188371)
chr6 (37-99)||(14278117-14278178)
chr6 (37-99)||(31622997-31623059)
chr6 (51-99)||(21418478-21418526)
chr6 (51-99)||(24641210-24641258)
chr6 (41-99)||(32613150-32613208)
chr6 (37-78)||(23910117-23910158)
chr6 (51-99)||(6776627-6776675)
chr6 (37-99)||(6691557-6691618)
chr6 (37-99)||(14557970-14558032)
chr6 (37-99)||(30127408-30127470)
chr6 (37-77)||(20213071-20213111)
chr6 (37-77)||(22107094-22107134)
chr6 (43-99)||(24507548-24507604)
chr6 (56-99)||(13441058-13441101)
chr6 (37-99)||(11423574-11423636)
chr6 (53-99)||(28028538-28028584)
chr6 (40-97)||(3779349-3779406)
chr6 (37-98)||(12216753-12216814)
chr6 (40-89)||(20863393-20863442)
chr6 (51-87)||(9433610-9433646)
chr6 (40-96)||(28363948-28364004)
[»] chr4 (63 HSPs)
chr4 (37-99)||(37109357-37109419)
chr4 (37-99)||(49576900-49576962)
chr4 (37-99)||(19238583-19238645)
chr4 (37-99)||(37720220-37720282)
chr4 (37-99)||(55427206-55427268)
chr4 (37-97)||(24827835-24827895)
chr4 (37-92)||(38869783-38869838)
chr4 (37-99)||(5795415-5795477)
chr4 (37-99)||(7292804-7292866)
chr4 (37-99)||(7949460-7949522)
chr4 (37-83)||(23377980-23378026)
chr4 (37-99)||(28635704-28635766)
chr4 (37-95)||(47044729-47044787)
chr4 (41-99)||(51250532-51250590)
chr4 (40-87)||(31759667-31759714)
chr4 (37-99)||(37274465-37274528)
chr4 (40-99)||(46545719-46545778)
chr4 (37-99)||(9241031-9241093)
chr4 (41-99)||(13901750-13901808)
chr4 (37-87)||(16581713-16581763)
chr4 (41-99)||(21660154-21660212)
chr4 (41-99)||(21668918-21668976)
chr4 (41-99)||(24234653-24234711)
chr4 (53-99)||(29195103-29195149)
chr4 (37-99)||(37980154-37980215)
chr4 (37-99)||(43728403-43728465)
chr4 (37-99)||(51948488-51948550)
chr4 (37-98)||(2185038-2185099)
chr4 (53-98)||(39030135-39030180)
chr4 (48-97)||(56236932-56236981)
chr4 (51-99)||(9936981-9937029)
chr4 (40-96)||(13265117-13265173)
chr4 (41-89)||(17618299-17618347)
chr4 (37-97)||(46295107-46295167)
chr4 (37-77)||(46329194-46329234)
chr4 (41-97)||(51747844-51747900)
chr4 (37-89)||(51954132-51954184)
chr4 (36-96)||(52254409-52254469)
chr4 (40-99)||(1730498-1730557)
chr4 (39-90)||(4688580-4688631)
chr4 (54-97)||(30557293-30557336)
chr4 (37-95)||(4249189-4249247)
chr4 (37-83)||(4483307-4483353)
chr4 (41-87)||(8030214-8030260)
chr4 (37-87)||(11592159-11592209)
chr4 (40-98)||(12821977-12822035)
chr4 (53-99)||(13496249-13496295)
chr4 (37-95)||(19680794-19680852)
chr4 (37-99)||(20281198-20281260)
chr4 (37-99)||(38206132-38206193)
chr4 (37-99)||(39509078-39509140)
chr4 (37-99)||(40283992-40284054)
chr4 (37-99)||(42281240-42281301)
chr4 (37-99)||(56409959-56410020)
chr4 (37-99)||(2622401-2622467)
chr4 (58-99)||(27965537-27965578)
chr4 (50-99)||(29312271-29312320)
chr4 (15-77)||(32992642-32992706)
chr4 (43-96)||(40285634-40285687)
chr4 (40-85)||(53496899-53496944)
chr4 (51-87)||(13015447-13015483)
chr4 (51-91)||(26489895-26489935)
chr4 (41-77)||(47202433-47202469)
[»] chr8 (44 HSPs)
chr8 (39-99)||(2203500-2203560)
chr8 (37-96)||(968373-968432)
chr8 (37-99)||(3624588-3624650)
chr8 (37-99)||(16852348-16852410)
chr8 (37-99)||(19703493-19703555)
chr8 (37-99)||(23361655-23361717)
chr8 (37-99)||(26688873-26688935)
chr8 (52-99)||(20994479-20994526)
chr8 (37-99)||(18540306-18540368)
chr8 (41-99)||(28783068-28783126)
chr8 (37-99)||(29431019-29431081)
chr8 (37-95)||(29858055-29858113)
chr8 (37-99)||(44780120-44780182)
chr8 (51-99)||(32157199-32157247)
chr8 (37-87)||(6536540-6536590)
chr8 (41-99)||(8485007-8485065)
chr8 (37-99)||(11819784-11819846)
chr8 (37-99)||(27750738-27750800)
chr8 (40-99)||(5264552-5264611)
chr8 (40-99)||(6436564-6436623)
chr8 (15-99)||(8059640-8059726)
chr8 (43-98)||(28750580-28750634)
chr8 (37-96)||(35690070-35690129)
chr8 (53-99)||(6530815-6530861)
chr8 (37-95)||(12988440-12988498)
chr8 (37-87)||(22193370-22193420)
chr8 (37-99)||(23874388-23874450)
chr8 (37-99)||(33017222-33017284)
chr8 (17-99)||(18897174-18897258)
chr8 (45-97)||(6569785-6569837)
chr8 (56-99)||(22268958-22269001)
chr8 (48-99)||(35826319-35826370)
chr8 (53-96)||(40591743-40591786)
chr8 (37-99)||(3058055-3058117)
chr8 (37-99)||(4830495-4830557)
chr8 (37-87)||(8794351-8794401)
chr8 (37-99)||(11793527-11793589)
chr8 (37-99)||(30483890-30483952)
chr8 (37-99)||(36042989-36043051)
chr8 (40-97)||(4435985-4436042)
chr8 (37-77)||(3524407-3524447)
chr8 (51-91)||(7140725-7140765)
chr8 (43-87)||(7526699-7526743)
chr8 (37-97)||(18546368-18546428)
[»] chr5 (37 HSPs)
chr5 (37-96)||(16773818-16773877)
chr5 (41-99)||(21549147-21549205)
chr5 (37-99)||(30109314-30109376)
chr5 (41-97)||(16457820-16457876)
chr5 (40-99)||(14495814-14495873)
chr5 (15-99)||(25627065-25627151)
chr5 (41-99)||(30883208-30883266)
chr5 (37-97)||(87429-87489)
chr5 (40-99)||(1410668-1410727)
chr5 (37-99)||(892480-892542)
chr5 (37-99)||(14285169-14285231)
chr5 (37-99)||(21589296-21589358)
chr5 (37-99)||(29692392-29692454)
chr5 (37-99)||(34984814-34984876)
chr5 (37-99)||(7918475-7918537)
chr5 (51-97)||(15641812-15641858)
chr5 (41-99)||(16436626-16436683)
chr5 (37-99)||(17028270-17028332)
chr5 (37-87)||(37148046-37148096)
chr5 (37-99)||(43241688-43241750)
chr5 (51-99)||(8278295-8278343)
chr5 (51-99)||(29075789-29075837)
chr5 (37-72)||(3584691-3584726)
chr5 (37-76)||(4793094-4793133)
chr5 (40-99)||(22020871-22020930)
chr5 (36-99)||(40461618-40461681)
chr5 (37-96)||(43442207-43442266)
chr5 (37-99)||(6844737-6844799)
chr5 (37-83)||(9842852-9842898)
chr5 (37-99)||(16172990-16173051)
chr5 (51-97)||(18437095-18437141)
chr5 (37-87)||(18596007-18596057)
chr5 (37-99)||(19043466-19043528)
chr5 (37-99)||(22737090-22737152)
chr5 (37-99)||(26078057-26078119)
chr5 (41-77)||(84854-84890)
chr5 (40-92)||(22932932-22932984)
[»] scaffold0258 (1 HSPs)
scaffold0258 (37-99)||(15329-15391)
[»] scaffold0002 (1 HSPs)
scaffold0002 (37-99)||(94977-95039)
[»] chr1 (70 HSPs)
chr1 (37-99)||(9165201-9165263)
chr1 (37-99)||(16169984-16170046)
chr1 (37-99)||(52116787-52116849)
chr1 (52-99)||(44126403-44126450)
chr1 (37-96)||(52336780-52336839)
chr1 (37-99)||(19528333-19528395)
chr1 (37-99)||(33700779-33700841)
chr1 (37-99)||(36371478-36371540)
chr1 (41-99)||(40257407-40257465)
chr1 (37-99)||(51814502-51814564)
chr1 (43-99)||(31794276-31794332)
chr1 (37-96)||(8177188-8177247)
chr1 (37-88)||(31383804-31383855)
chr1 (40-99)||(41508839-41508898)
chr1 (37-99)||(4566556-4566618)
chr1 (37-99)||(6122802-6122864)
chr1 (37-99)||(15581148-15581209)
chr1 (37-99)||(15786326-15786388)
chr1 (37-99)||(19940878-19940940)
chr1 (37-99)||(29817683-29817745)
chr1 (41-87)||(36124853-36124899)
chr1 (41-99)||(37400282-37400340)
chr1 (37-98)||(52029943-52030004)
chr1 (36-96)||(952522-952582)
chr1 (37-97)||(47753724-47753784)
chr1 (40-87)||(10526843-10526890)
chr1 (44-99)||(42983387-42983442)
chr1 (41-95)||(1690087-1690141)
chr1 (37-95)||(2799874-2799932)
chr1 (37-83)||(3265948-3265994)
chr1 (37-99)||(4824979-4825041)
chr1 (41-99)||(8904422-8904480)
chr1 (37-99)||(9117127-9117189)
chr1 (37-99)||(9964446-9964508)
chr1 (41-99)||(17745266-17745324)
chr1 (37-99)||(21547486-21547548)
chr1 (37-99)||(24730392-24730454)
chr1 (40-94)||(28411343-28411397)
chr1 (37-99)||(37046993-37047054)
chr1 (37-90)||(12587287-12587340)
chr1 (51-99)||(8818143-8818191)
chr1 (37-99)||(21694454-21694513)
chr1 (41-97)||(30689022-30689078)
chr1 (39-99)||(35699960-35700020)
chr1 (41-96)||(31605858-31605913)
chr1 (48-99)||(35187927-35187978)
chr1 (41-99)||(50901589-50901648)
chr1 (15-87)||(50919974-50920048)
chr1 (37-99)||(1247121-1247183)
chr1 (37-83)||(4280457-4280503)
chr1 (41-87)||(21184398-21184444)
chr1 (37-99)||(25297780-25297842)
chr1 (51-97)||(28022145-28022191)
chr1 (57-99)||(38978968-38979010)
chr1 (41-99)||(43445971-43446029)
chr1 (45-87)||(44046162-44046204)
chr1 (37-99)||(47720838-47720900)
chr1 (37-99)||(47727830-47727892)
chr1 (37-99)||(51703787-51703849)
chr1 (41-86)||(12370185-12370229)
chr1 (43-99)||(18459243-18459300)
chr1 (37-86)||(27223136-27223185)
chr1 (40-97)||(42787218-42787275)
chr1 (51-99)||(2069664-2069711)
chr1 (40-88)||(9643818-9643866)
chr1 (41-77)||(17297014-17297050)
chr1 (51-99)||(17410239-17410287)
chr1 (43-99)||(26232398-26232454)
chr1 (51-99)||(45235399-45235447)
chr1 (53-97)||(51013148-51013192)
[»] scaffold0299 (1 HSPs)
scaffold0299 (37-99)||(11536-11598)
[»] scaffold0194 (1 HSPs)
scaffold0194 (37-97)||(13052-13112)
[»] scaffold0236 (1 HSPs)
scaffold0236 (40-99)||(24849-24908)
[»] scaffold0180 (1 HSPs)
scaffold0180 (37-96)||(19968-20027)
[»] scaffold0517 (1 HSPs)
scaffold0517 (41-99)||(7736-7794)
[»] scaffold0122 (1 HSPs)
scaffold0122 (37-99)||(6925-6987)
[»] scaffold0101 (1 HSPs)
scaffold0101 (41-99)||(43342-43400)
[»] scaffold1367 (1 HSPs)
scaffold1367 (37-99)||(846-908)
[»] scaffold0291 (1 HSPs)
scaffold0291 (37-99)||(2476-2538)
[»] scaffold0070 (2 HSPs)
scaffold0070 (37-99)||(42526-42588)
scaffold0070 (41-99)||(38912-38970)
[»] scaffold0337 (1 HSPs)
scaffold0337 (43-99)||(1761-1817)
[»] scaffold0065 (1 HSPs)
scaffold0065 (43-99)||(12197-12253)
[»] scaffold0172 (1 HSPs)
scaffold0172 (41-96)||(15787-15842)
[»] scaffold0221 (1 HSPs)
scaffold0221 (41-99)||(2919-2977)
[»] scaffold0211 (1 HSPs)
scaffold0211 (53-99)||(24061-24107)
[»] scaffold0126 (1 HSPs)
scaffold0126 (37-87)||(25353-25403)
[»] scaffold0118 (1 HSPs)
scaffold0118 (37-99)||(41639-41701)
[»] scaffold0032 (1 HSPs)
scaffold0032 (37-99)||(112290-112352)
[»] scaffold0009 (1 HSPs)
scaffold0009 (41-95)||(19857-19911)
[»] scaffold0006 (1 HSPs)
scaffold0006 (37-99)||(163015-163077)
[»] scaffold0056 (1 HSPs)
scaffold0056 (42-87)||(61659-61704)
[»] scaffold0044 (1 HSPs)
scaffold0044 (37-86)||(92968-93017)
[»] scaffold0187 (2 HSPs)
scaffold0187 (51-99)||(12442-12490)
scaffold0187 (51-99)||(22770-22818)
[»] scaffold0021 (1 HSPs)
scaffold0021 (51-99)||(157007-157055)


Alignment Details
Target: chr3 (Bit Score: 439; Significance: 0; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 439; E-Value: 0
Query Start/End: Original strand, 37 - 533
Target Start/End: Complemental strand, 11612369 - 11611865
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaacccacgtcccatt-aagcaaaaactataatgcagtatttca 135  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| || ||||| ||||||| ||| |||||||||||||||    
T  11612369 aacctgagaccttaaggaggagcacactcccagctcccaagtgaataccaccaggccaacccaggtaccatttaagcaaagactttaatgcagtatttca 11612270  T
Q  136 ggcatagctagaga-------taataaagcatttaccgttggcaatttccttctctttagcctccaaagttggtgcaaagttcaaagggttaaaaattcc 228  Q
    ||||||||||||||       |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11612269 ggcatagctagagagtagagataataaagcatttaccattagcaatttccttctctttagcctccaaagttggtgcaaagttcaaagggttaaaaattcc 11612170  T
Q  229 accggggtaaccaacctcaccctttggcaaactgtattgcttgaagataggatcttggttaacgctaccagggttcttaatgtcttgccatcttctaatc 328  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11612169 accggggtaaccaacctcaccctttggcaaactgtattgcttgaagataggatcttggttaacgctaccagggttcttaatgtcttgccatcttctaatc 11612070  T
Q  329 tcgacgtaatggaacaaaatgaactcgatcacaaagagtgttgaagatgaagcaaagtattcttctttccctgcatcataccattttggaacgttgatga 428  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11612069 tcgacgtaatggaacaaaatgaactcgatcacaaagagtgttgaagatgaagcaaagtattcttctttccctgcatcataccattttggaacgttgatga 11611970  T
Q  429 ttccaatgttggtgaagacttcagggagtaacatccctgcaacacctaacatagcccaacgtccattcacaagctcggcttgaacaaaccatttcaagtt 528  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11611969 ttccaatgttggtgaagacttcagggagtaacatccctgcaacacctaacatagcccaacgtccattcacaagctcggcttgaacaaaccatttcaagtt 11611870  T
Q  529 ctctg 533  Q
    |||||    
T  11611869 ctctg 11611865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 5499413 - 5499475
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| ||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||    
T  5499413 aaccttagaccttaaggaggagcacactctcagatctcaagtcaataccaccaggccaaccca 5499475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 12761582 - 12761520
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||| || |||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  12761582 aacctgagagctcaaggaggaacacactcccaggtcccaagtcaataccaccagaccaaccca 12761520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 99
Target Start/End: Original strand, 4844519 - 4844579
Alignment:
Q  39 cctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  4844519 cctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaaccca 4844579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 39 - 99
Target Start/End: Original strand, 4870215 - 4870275
Alignment:
Q  39 cctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  4870215 cctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaaccca 4870275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 2667932 - 2667870
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||  |||| |||||||||||||| ||||||| |||||||||||||||||||||    
T  2667932 aacctgagacctcgaggaagagcacactcccagatcccaagccaataccaccaggccaaccca 2667870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 10499115 - 10499177
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||| ||||| ||||| |||||||| ||||||| |||||||||||||||||||||    
T  10499115 aacctgagacctcaaggaagagcagactcccagatcccaagccaataccaccaggccaaccca 10499177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 14186717 - 14186656
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||||||| |||||||||||    
T  14186717 aacctgagaccttgaggaggagcacactcc-aggtcccaagacaataccactaggccaaccca 14186656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 27093367 - 27093429
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||||||||||||| || ||||| ||||||||| |||||||||||    
T  27093367 aacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaaccca 27093429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 30311376 - 30311314
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| ||||||||||||||||||| ||||||| | ||||||| |||||||||||    
T  30311376 aacctgagaccttgaggaggagcacactcccagatcccaagcctataccactaggccaaccca 30311314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 37788471 - 37788533
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||||||||||| |||| |||||||||||||||  ||||||||||    
T  37788471 aacctgagaccttgaggaggagcacactcctaggttccaagtcaataccactgggccaaccca 37788533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 32651447 - 32651503
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaac 96  Q
    |||||| ||| ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  32651447 ctgagatcttgaggaggagcacactcccaggtcccaagccaataccactaggccaac 32651503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 95
Target Start/End: Complemental strand, 14339680 - 14339622
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaa 95  Q
    |||||||||| || ||||||||||||||||||  ||||||| |||||||||||||||||    
T  14339680 aacctgagacattgaggaggagcacactcccaaatcccaagccaataccaccaggccaa 14339622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 16354898 - 16354960
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||| | ||||||||||||||| ||||| ||||| ||||||||| |||||||||||    
T  16354898 aacctgagaccctgaggaggagcacactcacaggttccaagccaataccactaggccaaccca 16354960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 17554841 - 17554779
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||| |||| |||| |||||||||||||||||||||| |||||||||||  ||||||||    
T  17554841 aacctgagcccttgaggaagagcacactcccaggtcccaagccaataccaccaaaccaaccca 17554779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 31520611 - 31520673
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| ||||||  ||||||||||||||||||| ||||||| |||| ||||||||||||||||    
T  31520611 aacctaagacctcgaggaggagcacactcccagatcccaagccaatgccaccaggccaaccca 31520673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 42799754 - 42799815
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| || ||||||||||||| |||||||||| ||| |||||||||||||||||    
T  42799754 aacctgagaccttgag-aggagcacactccaaggtcccaagccaacaccaccaggccaaccca 42799815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 46518698 - 46518636
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||| ||||| ||||||||||||||||||| ||||||| ||||||||| | |||||||||    
T  46518698 aacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactatgccaaccca 46518636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 53413015 - 53412953
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||||||||||||||||  |||| ||||||||| || ||||||||    
T  53413015 aacctgagaccttgaggaggagcacactcccaggttacaagccaataccactagaccaaccca 53412953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 7975488 - 7975428
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    ||||| ||||||| ||||||||||||||||||| ||||||| | ||||||| |||||||||    
T  7975488 aacctaagaccttgaggaggagcacactcccagatcccaagcctataccactaggccaacc 7975428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 27923049 - 27923109
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    ||||||||||  | |||||||||||||| ||| |||||||| |||||||||||||||||||    
T  27923049 aacctgagactatgaggaggagcacacttccatgtcccaagccaataccaccaggccaacc 27923109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 10445145 - 10445208
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaa-taccaccaggccaaccca 99  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||| | |||| |||||||||||    
T  10445145 aacctgagacctcgaggaggagcacactcccaggtcccaagccaattgccactaggccaaccca 10445208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 16991609 - 16991550
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||| || || ||| |||||||||| ||||||| |||||||||||||||||||||    
T  16991609 ctgagacctcaaagaagagtacactcccagatcccaagccaataccaccaggccaaccca 16991550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 37 - 76
Target Start/End: Complemental strand, 20501766 - 20501727
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaa 76  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  20501766 aacctgagaccttaaggaggagcacactctcaggtcccaa 20501727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 21960618 - 21960559
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||  ||||||||||||||| ||||||||||| ||||||||||||  |||||||    
T  21960618 ctgagacctcgaggaggagcacactctcaggtcccaagccaataccaccagcgcaaccca 21960559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 203152 - 203098
Alignment:
Q  45 accttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||  ||||||||||| | ||||||||||||||||| |||||||||||    
T  203152 accttaaggaaaagcacactccctgatcccaagtcaataccactaggccaaccca 203098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 2597226 - 2597288
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||| ||||||||||||||||| |  ||| ||| |||||||||||| ||||||||    
T  2597226 aacctgagacctcaaggaggagcacactcctaaatccgaagccaataccaccagaccaaccca 2597288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 3055064 - 3055002
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||| ||| ||||| ||||| |||| |||||||||| ||| |||||||||||||||||    
T  3055064 aacctgagatcttgaggagaagcacgctccaaggtcccaagccaacaccaccaggccaaccca 3055002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 4222211 - 4222149
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| |||| || ||||||||||||||||||| ||||||| ||||||||| | |||||||||    
T  4222211 aacctaagactttgaggaggagcacactcccagatcccaagccaataccactaagccaaccca 4222149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 8051280 - 8051222
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||  ||||| |||| ||| |||||||||||| |||||||||||||||||||||    
T  8051280 tgagacctcgaggagaagcatactgccaggtcccaagccaataccaccaggccaaccca 8051222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 8075133 - 8075195
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||| ||||| |||||||||||||||||| |||||||| | ||||||| ||| |||||||    
T  8075133 aacctgaaaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaaccca 8075195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 8170742 - 8170680
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| || ||||||||||||||| ||  |||| ||||||||| |||||||||||    
T  8170742 aacctgagaccttgagtaggagcacactcccaagtttcaagccaataccactaggccaaccca 8170680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 13808891 - 13808953
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||  |||||||||||||| |||| |||||||||||||  ||||| ||||||||    
T  13808891 aacctgagacctagaggaggagcacactgccagatcccaagtcaataagaccagaccaaccca 13808953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 19154701 - 19154639
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| ||||||||||||||| |||| | |||| |||||| || |||||||||||    
T  19154701 aacctgagacctttaggaggagcacactctcaggcctcaagccaatacaactaggccaaccca 19154639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 97
Target Start/End: Original strand, 31510730 - 31510784
Alignment:
Q  43 agaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    ||||| || ||||||||| ||||||| ||||||||||||||||||||| ||||||    
T  31510730 agaccgtatggaggagcatactcccaagtcccaagtcaataccaccagaccaacc 31510784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 33270478 - 33270540
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| ||| ||| ||||||   ||||||||||||||||||||||| ||||||||    
T  33270478 aacctgagacctttaggtggaacacacttagaggtcccaagtcaataccaccagaccaaccca 33270540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 36720451 - 36720389
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||| ||||  ||||||||||||||||||  ||||||| |||||||||||| ||||||||    
T  36720451 aacctgaaacctcgaggaggagcacactcccatatcccaagccaataccaccagaccaaccca 36720389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 38550410 - 38550472
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| |||||| |||||||||||||||||||   || |||||||||||| ||||||||||||    
T  38550410 aacctcagacctcaaggaggagcacactcccaaaccctaagtcaataccaacaggccaaccca 38550472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 40268558 - 40268497
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||||| ||||||| |||||| |||||||||| ||| |||||||||| ||||||    
T  40268558 aacctgagaccttaa-gaggagcccactccaaggtcccaagccaacaccaccaggcaaaccca 40268497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 47236981 - 47237035
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaa 95  Q
    ||||||||| | ||||||||||||||| ||||||||  |||||||||||||||||    
T  47236981 tgagaccttgaagaggagcacactcccgggtcccaaaccaataccaccaggccaa 47237035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 51903884 - 51903946
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||   ||||||||||||||||||| ||||||| |||||||| |||| |||||||    
T  51903884 aacctgagaccacgaggaggagcacactcccagatcccaagccaataccaacaggtcaaccca 51903946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 17554522 - 17554458
Alignment:
Q  37 aacctgagaccttaaggaggagcacactccca--ggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| | |||||||| |||| ||  ||||||||||||||| |||||||||||||||    
T  17554522 aacctgagaccttgaagaggagcagactctcacaggtcccaagtcaatatcaccaggccaaccca 17554458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 18319181 - 18319234
Alignment:
Q  44 gaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    |||||| | ||||||||||||||||||||||||  ||||||||||| |||||||    
T  18319181 gaccttgaagaggagcacactcccaggtcccaaaccaataccaccaagccaacc 18319234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 17108904 - 17108956
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccacca 89  Q
    ||||||||||||| ||||||||||||||||||  || | ||||||||||||||    
T  17108904 aacctgagaccttgaggaggagcacactcccacatctccagtcaataccacca 17108956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 31788990 - 31789038
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||||||||| ||||||| ||||| ||| |||||||||||    
T  31788990 aggaggagcacactcccagatcccaagccaataacactaggccaaccca 31789038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 47279414 - 47279450
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaag 77  Q
    ||||||||||||||||||||||||||||| |||||||    
T  47279414 tgagaccttaaggaggagcacactcccagatcccaag 47279450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 8368805 - 8368864
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaac 96  Q
    ||||||||||||  |||| ||||||||| ||||||  |||||||||||||| ||||||||    
T  8368805 aacctgagacctcgaggatgagcacactaccaggtttcaagtcaataccactaggccaac 8368864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 39976441 - 39976488
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccacc 88  Q
    ||||||||| || |||||||||||| || |||||||||||||||||||    
T  39976441 tgagaccttgagaaggagcacactctcaagtcccaagtcaataccacc 39976488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 61 - 99
Target Start/End: Complemental strand, 9832543 - 9832505
Alignment:
Q  61 cactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  9832543 cactcccaggtcccaagccaataccaccgggccaaccca 9832505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 10828739 - 10828785
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaata 83  Q
    |||||||||||||||| ||||||| |||||||||||| ||| |||||    
T  10828739 aacctgagaccttaagtaggagcatactcccaggtcctaagacaata 10828785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 15034414 - 15034353
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| || |||| ||| |||| |||||||||| ||| |||||||||||||||||    
T  15034414 aacctgagaccttgag-aggatcaccctccaaggtcccaaggcaacaccaccaggccaaccca 15034353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 15048067 - 15048129
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||||||| |||||| ||||||| | ||||||  | |||||||||    
T  15048067 aacctgagaccttgaggaggagcacattcccagatcccaagcctataccattaagccaaccca 15048129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 19716267 - 19716205
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||| |||||||| ||||||||||||||||  ||||||||| ||| ||||||| | |||||||    
T  19716267 aaccagagaccttgaggaggagcacactccatggtcccaagccaacaccaccatgtcaaccca 19716205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 26871510 - 26871572
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| |||| || |||||||| | ||||| |||||||||| ||| |||||||||||||||||    
T  26871510 aacctcagactttgaggaggagaaaactccaaggtcccaagccaacaccaccaggccaaccca 26871572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 27259231 - 27259185
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaata 83  Q
    ||||||| ||||  ||||||||||||||||||||||||||| |||||    
T  27259231 aacctgaaacctcgaggaggagcacactcccaggtcccaagccaata 27259185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 30510205 - 30510267
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||  || ||||||| ||||| |||||||||| || |||||||||| |||||||    
T  30510205 aacctgagacctcgagaaggagcatactcctaggtcccaagccagtaccaccaggacaaccca 30510267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 37051300 - 37051346
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaata 83  Q
    |||||||||| |||||||||| ||||||||||| |||||| ||||||    
T  37051300 aacctgagactttaaggaggaacacactcccagatcccaaatcaata 37051346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 79
Target Start/End: Complemental strand, 39253767 - 39253725
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtc 79  Q
    ||||||||||||| | ||||||||||||||||| |||||||||    
T  39253767 aacctgagaccttgaagaggagcacactcccagatcccaagtc 39253725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 42430388 - 42430343
Alignment:
Q  53 gaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||| || ||||||||||||||||||| |||||||||    
T  42430388 gaggagcacactccaagatcccaagtcaataccacca-gccaaccca 42430343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 47810750 - 47810812
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||| ||||||||  ||||||||||||||||| | || ||| |||||||||||| ||||||||    
T  47810750 aacccgagaccttgcggaggagcacactcccaagaccaaagccaataccaccagaccaaccca 47810812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 26411598 - 26411557
Alignment:
Q  54 aggagcacactcccaggtcccaagtcaataccaccaggccaa 95  Q
    |||||||||||| ||||||||||||||||| |||||| ||||    
T  26411598 aggagcacactctcaggtcccaagtcaatatcaccagaccaa 26411557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 52769989 - 52770026
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtccc 74  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  52769989 aacctgagacctcaaggaggagcacactcccagatccc 52770026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 16212982 - 16213018
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaag 77  Q
    |||||||||||||||||||||||||||| ||| ||||    
T  16212982 tgagaccttaaggaggagcacactcccaagtctcaag 16213018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 19341857 - 19341809
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||||||| ||| |||||| ||||||| ||| |||||||    
T  19341857 aggaggagcacactcccaagtctcaagtctataccactagggcaaccca 19341809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 26481983 - 26481935
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||||| ||||||||||| || |||||||| || ||||||    
T  26481983 aggaggagcacactctcaggtcccaagccattaccaccaagctaaccca 26481935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 28703410 - 28703450
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaag 77  Q
    ||||||||||||| | ||||||||||||||||| |||||||    
T  28703410 aacctgagaccttgaagaggagcacactcccagatcccaag 28703450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 51 - 95
Target Start/End: Original strand, 28928899 - 28928943
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccaggccaa 95  Q
    ||||||||||||||| ||| ||||||| ||||||||| |||||||    
T  28928899 aggaggagcacactctcagatcccaagccaataccactaggccaa 28928943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 90
Target Start/End: Original strand, 40130123 - 40130159
Alignment:
Q  54 aggagcacactcccaggtcccaagtcaataccaccag 90  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  40130123 aggagcacactaccagatcccaagtcaataccaccag 40130159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 44069828 - 44069776
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccacca 89  Q
    ||||||||||||| |||||||||||||||| || || |||| ||| |||||||    
T  44069828 aacctgagaccttgaggaggagcacactccaagatctcaagccaacaccacca 44069776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 44743861 - 44743901
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaag 77  Q
    ||||||||||||  ||||||||||||||||||| |||||||    
T  44743861 aacctgagacctcgaggaggagcacactcccagatcccaag 44743901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 48 - 96
Target Start/End: Original strand, 45699945 - 45699993
Alignment:
Q  48 ttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaac 96  Q
    |||||||||||||||||| || ||||||| |||||||||  ||||||||    
T  45699945 ttaaggaggagcacactctcaagtcccaaatcaataccaataggccaac 45699993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 54990772 - 54990732
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaag 77  Q
    ||||||||||||| ||||||||||| |||| ||||||||||    
T  54990772 aacctgagaccttgaggaggagcacgctccaaggtcccaag 54990732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 9e-56; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 162 - 288
Target Start/End: Original strand, 14455055 - 14455181
Alignment:
Q  162 taccgttggcaatttccttctctttagcctccaaagttggtgcaaagttcaaagggttaaaaattccaccggggtaaccaacctcaccctttggcaaact 261  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  14455055 taccgttagaaatttccttctctttagcctccaaagttggtgcaaagttcaaagggttaaaaattccactggggtaaccaacctcaccctttggcaagct 14455154  T
Q  262 gtattgcttgaagataggatcttggtt 288  Q
    |||||||||||||||||||||||||||    
T  14455155 gtattgcttgaagataggatcttggtt 14455181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 37480145 - 37480083
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  37480145 aacctgagaccttgaggaggagcacactctcaggtcccaagccaataccaccaggccaaccca 37480083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 39715062 - 39715000
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  39715062 aacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaaccca 39715000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 40416396 - 40416458
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||    
T  40416396 aacctgagaccttaaggaggagcatactcccaggttccaagtcaataccactaggccaaccca 40416458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 42327401 - 42327463
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  42327401 aacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaaccca 42327463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 12994386 - 12994441
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaac 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  12994386 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccactagaccaac 12994441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 21213839 - 21213777
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||| |||||||| ||||||||||||||||||| |||||||||||| ||||||||    
T  21213839 aacctgagacctcaaggaggaacacactcccaggtcccaagccaataccaccagaccaaccca 21213777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 29503341 - 29503279
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| ||||||||||||||||||||||||||  ||||||||| |||||||||||    
T  29503341 aacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccactaggccaaccca 29503279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 23052529 - 23052589
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    ||||||||||||| ||||| |||||||||||| |||||||| |||||||||||||||||||    
T  23052529 aacctgagaccttgaggagaagcacactcccaagtcccaagccaataccaccaggccaacc 23052589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 12086135 - 12086194
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaac 96  Q
    |||| |||||||| |||||||||||||| |||||||||||| ||||||||||||||||||    
T  12086135 aacccgagaccttgaggaggagcacacttccaggtcccaagccaataccaccaggccaac 12086194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 29197386 - 29197444
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||| | ||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  29197386 tgagacatcaaggaggagcacactcccaagtcccaagtcaataccaccaagccaaccca 29197444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 34041594 - 34041656
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| ||||||||||||||| ||| ||| ||||||||||||| |||||||||||    
T  34041594 aacctgagaccttgaggaggagcacactctcagatcctaagtcaataccactaggccaaccca 34041656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 42602624 - 42602562
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| ||||||| || |||||||||||||||||||||||| ||||||||| |||||||||||    
T  42602624 aacctaagaccttgagaaggagcacactcccaggtcccaagccaataccactaggccaaccca 42602562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 42860414 - 42860359
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaac 96  Q
    ||||||||  |||||||||||||||||||||| |||||||||| ||||||||||||    
T  42860414 tgagacctcgaggaggagcacactcccaggtctcaagtcaatatcaccaggccaac 42860359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 42922485 - 42922422
Alignment:
Q  37 aacctgagacctta-aggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||  ||||||||||||||||||||| ||||| ||||||||| |||||||||||    
T  42922485 aacctgagacctttgaggaggagcacactcccaggttccaagccaataccactaggccaaccca 42922422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 3001449 - 3001387
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||| || ||||||||||||||||| || || |||||||||||||| |||||||||||    
T  3001449 aacctgagatctcaaggaggagcacactcctagatctcaagtcaataccactaggccaaccca 3001387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 16918584 - 16918646
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| ||||||| ||||||||||||||||||| ||||||  ||||||||| |||||||||||    
T  16918584 aacctaagaccttgaggaggagcacactcccagatcccaaaccaataccactaggccaaccca 16918646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 19244179 - 19244117
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||  |||||||||||||| ||||||||||||||||||||  || ||||||||    
T  19244179 aacctgagaccttggggaggagcacactctcaggtcccaagtcaataccagtagaccaaccca 19244117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 28846761 - 28846711
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccac 87  Q
    |||||||||| |  |||||||||||||||||||||||||||||||||||||    
T  28846761 aacctgagacatcgaggaggagcacactcccaggtcccaagtcaataccac 28846711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 30359720 - 30359662
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||| |||||||||||||||| |||||||||| ||| ||||||| |||||||||    
T  30359720 tgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaagccaaccca 30359662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 7799055 - 7799103
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||||||| |||||||| ||||||||||||| |||||||    
T  7799055 aggaggagcacactcccaagtcccaagccaataccaccaggacaaccca 7799103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 11251157 - 11251097
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    ||||||||||||| |||||||||||||| ||| |||||||| ||||||||| | |||||||    
T  11251157 aacctgagaccttgaggaggagcacacttccaagtcccaagccaataccactaagccaacc 11251097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 99
Target Start/End: Complemental strand, 32106618 - 32106574
Alignment:
Q  55 ggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||| |||||||||||||| |||||||||||||||||    
T  32106618 ggagcacactccaaggtcccaagtcaacaccaccaggccaaccca 32106574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 24191904 - 24191849
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaac 96  Q
    ||||| || |||||||||||||||| ||||||||||| |||||||| |||||||||    
T  24191904 tgagatctcaaggaggagcacactctcaggtcccaagccaataccatcaggccaac 24191849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 4262308 - 4262354
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaata 83  Q
    ||||||||||||| |||||||||||||| |||||||||||| |||||    
T  4262308 aacctgagaccttgaggaggagcacactgccaggtcccaagccaata 4262354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 11062430 - 11062368
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| ||||| |||||||||||| || ||||| ||||| ||| |||||||||||    
T  11062430 aacctgagaccttgaggagaagcacactcccaagttccaagccaatatcactaggccaaccca 11062368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 21195682 - 21195744
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||||||||||||| || ||||| | ||||||| ||| |||||||    
T  21195682 aacctgagaccttgaggaggagcacactcccaagttccaagcctataccactagggcaaccca 21195744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 37755981 - 37756039
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||  || ||||||||| |||||||||||||| ||||||||||| |||||||||    
T  37755981 tgagacctcgagtaggagcacattcccaggtcccaagccaataccaccaagccaaccca 37756039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 1729872 - 1729824
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||||||| |||||||| ||||||||| || ||||||||    
T  1729872 aggaggagcacactcccaagtcccaagccaataccactagcccaaccca 1729824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 26482162 - 26482103
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    ||||||||||||| || ||||||||||||| |||||||||| ||| |||| ||||||||||    
T  26482162 aacctgagaccttgag-aggagcacactcctaggtcccaagccaacaccatcaggccaacc 26482103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 99
Target Start/End: Original strand, 4438992 - 4439047
Alignment:
Q  44 gaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||| ||||||||||||||| ||| |||||||| |||||||  |||||||||||    
T  4438992 gaccttgaggaggagcacactctcagatcccaagttaataccattaggccaaccca 4439047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 18259800 - 18259741
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaac 96  Q
    ||||||||||||  ||||||||||||||| ||  || |||| ||||||||||||||||||    
T  18259800 aacctgagacctataggaggagcacactctcaaatctcaagccaataccaccaggccaac 18259741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 22999286 - 22999230
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||| |||||||||||  |||||||||| ||||||||||||| | |||||||||    
T  22999286 tgagaccttgaggaggagcac--tcccaggtccaaagtcaataccacaatgccaaccca 22999230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 76
Target Start/End: Complemental strand, 33582043 - 33582004
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaa 76  Q
    |||||||||||| |||||||||||||||| ||||||||||    
T  33582043 aacctgagacctcaaggaggagcacactctcaggtcccaa 33582004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 76
Target Start/End: Original strand, 33839266 - 33839305
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaa 76  Q
    ||||||||||||| |||||||||||||||||| |||||||    
T  33839266 aacctgagaccttgaggaggagcacactcccatgtcccaa 33839305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 19016097 - 19016039
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||  |||||||||||||||||| ||| |||| |||||||| ||| ||||||||    
T  19016097 tgagacctcgaggaggagcacactcccaagtctcaagccaataccatcagaccaaccca 19016039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 19322838 - 19322788
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccac 87  Q
    |||| |||||||| | ||||||||||||||||||||||||  |||||||||    
T  19322838 aaccagagaccttgaagaggagcacactcccaggtcccaaaccaataccac 19322788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 30410559 - 30410605
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccac 87  Q
    |||| |||| |||||||||||||||| |||||||||| |||||||||    
T  30410559 tgagtccttgaggaggagcacactcctaggtcccaagccaataccac 30410605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 41908648 - 41908706
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||| |||||||||||||||| ||||| |||  | | |||||||||||||||||    
T  41908648 tgagaccttgaggaggagcacactccaaggtctcaaaccgacaccaccaggccaaccca 41908706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 5147690 - 5147747
Alignment:
Q  42 gagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||| || ||||||| |||||||| || |||||||||||||| || ||||||||    
T  5147690 gagaccttgagaaggagcatactcccagatctcaagtcaataccactagaccaaccca 5147747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 7667488 - 7667537
Alignment:
Q  50 aaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||||||||| |||||||| ||||| |||| | ||||||||    
T  7667488 aaggaggagcacactcccaagtcccaagccaatatcacccgaccaaccca 7667537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 41504956 - 41504993
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccacc 88  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  41504956 aggaggagcatactcccaggtcccaagccaataccacc 41504993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 16814188 - 16814240
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccacca 89  Q
    ||||||| |||||||| |||| ||||||| || |||||||||||||| |||||    
T  16814188 aacctgaaaccttaagaaggaacacactctcacgtcccaagtcaatagcacca 16814240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 16853467 - 16853519
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccacca 89  Q
    ||||||| |||||||| |||| ||||||| || |||||||||||||| |||||    
T  16853467 aacctgaaaccttaagaaggaacacactctcacgtcccaagtcaatagcacca 16853519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 23230625 - 23230661
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccac 87  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  23230625 aggaggagcacactcccagttcccaaatcaataccac 23230661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 59 - 99
Target Start/End: Complemental strand, 25931054 - 25931014
Alignment:
Q  59 cacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||| ||||||||||  |||||||||||||||||||||    
T  25931054 cacactctcaggtcccaaaccaataccaccaggccaaccca 25931014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 41202306 - 41202258
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||| |||||||| || || |||||||||||||| ||||||||    
T  41202306 aggaggagcatactcccagatctcaggtcaataccaccagaccaaccca 41202258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 89; Significance: 1e-42; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 172 - 288
Target Start/End: Original strand, 34298 - 34414
Alignment:
Q  172 aatttccttctctttagcctccaaagttggtgcaaagttcaaagggttaaaaattccaccggggtaaccaacctcaccctttggcaaactgtattgcttg 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||  ||||| ||||| ||||||||||||    
T  34298 aatttccttctctttagcctccaaagttggtgcaaagttcaaagggttaaaaattccattgaggtaaccaacctttcccttaggcaagctgtattgcttg 34397  T
Q  272 aagataggatcttggtt 288  Q
    |||||||||||||||||    
T  34398 aagataggatcttggtt 34414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 172 - 288
Target Start/End: Original strand, 40931 - 41040
Alignment:
Q  172 aatttccttctctttagcctccaaagttggtgcaaagttcaaagggttaaaaattccaccggggtaaccaacctcaccctttggcaaactgtattgcttg 271  Q
    ||||||||||||||||||||||||||||||||||||       |||||||| ||||||  ||||||||||||||||||||||||||| ||||||||||||    
T  40931 aatttccttctctttagcctccaaagttggtgcaaa-------gggttaaatattccattggggtaaccaacctcaccctttggcaagctgtattgcttg 41023  T
Q  272 aagataggatcttggtt 288  Q
    |||||||||||||||||    
T  41024 aagataggatcttggtt 41040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 2e-41; HSPs: 73)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 162 - 288
Target Start/End: Complemental strand, 13764165 - 13764039
Alignment:
Q  162 taccgttggcaatttccttctctttagcctccaaagttggtgcaaagttcaaagggttaaaaattccaccggggtaaccaacctcaccctttggcaaact 261  Q
    ||||||| | ||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||  |||||||||||||||||||||||| || ||    
T  13764165 taccgttagaaatttacttctctttagcctccaaagttggtgcaaatttcaaagggttaaaaattacattggggtaaccaacctcaccctttggtaagct 13764066  T
Q  262 gtattgcttgaagataggatcttggtt 288  Q
    || ||||||||||||||||||||||||    
T  13764065 gtgttgcttgaagataggatcttggtt 13764039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 22760933 - 22760871
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22760933 aacctgagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaaccca 22760871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 37 - 95
Target Start/End: Complemental strand, 7801250 - 7801192
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaa 95  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  7801250 aacctgagaccttgaagaggagcacactcccaggtcccaagtcaataccaccaggccaa 7801192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 23301612 - 23301670
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23301612 tgagacctcaaggaggagcacactcccaagtcccaagtcaataccaccaggccaaccca 23301670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 26459416 - 26459478
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  26459416 aacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaaccca 26459478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 21877874 - 21877819
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaac 96  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  21877874 tgagaccttaaggaggagcaccctcccaggtcccaagtcaataccactaggccaac 21877819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 15905680 - 15905741
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  15905680 aacctgagacct-aaggaggagcacactcccaggtcccaagccaataccgccaggccaaccca 15905741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 23552184 - 23552126
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  23552184 tgagaccttgaggaggagcacactcccaggtcccaagtcaatagcactaggccaaccca 23552126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 43590977 - 43590915
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||| || |||||||||||||||||| |||||||| |||||||||||||||||||||    
T  43590977 aacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggccaaccca 43590915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 48772008 - 48771946
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||||||||||| |||||||||    
T  48772008 aacctgagacctcaaggaggagcacactcccagatcccaagccaataccaccaagccaaccca 48771946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 11720969 - 11721026
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    |||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  11720969 ctgataccttaaggaggagcacattcccaggtcccaagccaataccaccaggccaacc 11721026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 15137624 - 15137561
Alignment:
Q  36 taacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||| |||||||||||||||| |  |||||||||| ||||||||||||||||||    
T  15137624 taacctgagaccttgaggaggagcacactcctaaatcccaagtcagtaccaccaggccaaccca 15137561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 5579240 - 5579302
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||| ||||||||| |||||||    
T  5579240 aacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggtcaaccca 5579302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 19553523 - 19553462
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| ||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  19553523 aacctaagaccttgaggaggagcacactcccaggt-ccaagccaataccaccaggccaaccca 19553462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 25021345 - 25021403
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||| || ||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  25021345 tgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaaccca 25021403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 30579405 - 30579343
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||| | ||||||||||||| |||| |||||||||||||||||||||    
T  30579405 aacctgagaccttgaggaggtggacactcccaggtctcaagccaataccaccaggccaaccca 30579343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 39631914 - 39631852
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||||  |||||||||||||||| ||||||||| |||||||||||    
T  39631914 aacctgagaccttgaggaggagcttactcccaggtcccaagccaataccactaggccaaccca 39631852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 41519270 - 41519332
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||||||||||| |  ||||||||||||||||| |||||||||||    
T  41519270 aacctgagaccttgaggaggagcacactcctaaatcccaagtcaataccactaggccaaccca 41519332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 43215254 - 43215192
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||||||| || ||||||||    
T  43215254 aacctgagaccttgaggaggagcacactccgaggtcccaagccaataccactagaccaaccca 43215192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 45976937 - 45976991
Alignment:
Q  45 accttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||||||||||||||||| |||| ||||||||| |||||||||||    
T  45976937 accttaaggaggagcacactcccaggtcacaagccaataccactaggccaaccca 45976991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 99
Target Start/End: Original strand, 42836008 - 42836069
Alignment:
Q  38 acctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||| |||| |||| |||||||||||||||||||||| ||||||||| |||||||||||    
T  42836008 acctgaggccttgaggaagagcacactcccaggtcccaagccaataccactaggccaaccca 42836069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 3968651 - 3968710
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||| |||||||||||||||  |||||||||||||| ||||||| |||||||||    
T  3968651 ctgagaccttgaggaggagcacactcgaaggtcccaagtcaacaccaccatgccaaccca 3968710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 14058323 - 14058264
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaac 96  Q
    ||||||||||||| |||| |||||||||| ||||| ||||| ||||||||||||||||||    
T  14058323 aacctgagaccttgaggatgagcacactctcaggttccaagacaataccaccaggccaac 14058264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 14368351 - 14368292
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaac 96  Q
    ||||||||||||| |||| |||||||||| ||||| ||||| ||||||||||||||||||    
T  14368351 aacctgagaccttgaggatgagcacactctcaggttccaagacaataccaccaggccaac 14368292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 25132384 - 25132435
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccacc 88  Q
    |||||||||||||||| ||||||||||||| |||||| ||||||||||||||    
T  25132384 aacctgagaccttaagaaggagcacactcctaggtcctaagtcaataccacc 25132435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 5273596 - 5273658
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| ||||||| |||||||||||||||  |||||||||| ||| |||||||||||||||||    
T  5273596 aacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccaccaggccaaccca 5273658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 18056781 - 18056843
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||||||||||| | | ||||||||||||||||||| | ||||||    
T  18056781 aacctgagaccttcaggaggagcacactccgaagacccaagtcaataccaccagactaaccca 18056843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 30442558 - 30442496
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| ||||||| |||||||||| |||||||||||||||| |||||||||  ||||||||||    
T  30442558 aacctcagaccttgaggaggagcaaactcccaggtcccaagccaataccactgggccaaccca 30442496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 31835262 - 31835200
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||||||||||| ||  |||||| ||| |||||||||||||||||    
T  31835262 aacctgagaccttgaggaggagcacactccaagcacccaagccaacaccaccaggccaaccca 31835200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 39499729 - 39499787
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||| ||||| ||||||| ||||||||||| ||||||||| |||||||||||    
T  39499729 tgagaccttaaagaggaacacactcacaggtcccaagccaataccactaggccaaccca 39499787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 8108651 - 8108599
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccacca 89  Q
    |||||||||||| |||||||||| ||||||||  |||||||||||||||||||    
T  8108651 aacctgagacctcaaggaggagcgcactcccatatcccaagtcaataccacca 8108599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 21854616 - 21854556
Alignment:
Q  39 cctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||| || ||||||||||||||||||| |||| || |||||||| ||||||||||||    
T  21854616 cctgagactttgaggaggagcacactcccagatccctagccaataccatcaggccaaccca 21854556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 23595797 - 23595737
Alignment:
Q  39 cctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| ||||| |||||||||||||||| || || ||||||||||||||||| ||||||||    
T  23595797 cctgataccttgaggaggagcacactccgagatctcaagtcaataccaccagaccaaccca 23595737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 36803647 - 36803695
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||| |||||||||||||||||||||||||| || ||||||||    
T  36803647 aggaggagcatactcccaggtcccaagtcaataccactagaccaaccca 36803695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 99
Target Start/End: Original strand, 37233580 - 37233640
Alignment:
Q  39 cctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||| ||||| | |||||||    
T  37233580 cctgagaccttaaggaggagcacactcccacatcccaagccaatatcaccaagtcaaccca 37233640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 41487429 - 41487370
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||   |||||| ||||||||| |||||||| |||||||||||||||||||||    
T  41487429 aacctgagacctt---gaggagaacactcccaagtcccaagccaataccaccaggccaaccca 41487370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 25956279 - 25956360
Alignment:
Q  19 attgacaccaggaagcat--aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||| || ||  ||||| ||||||| || ||||||||||||| |||||||||| ||||||||| |||||||||||    
T  25956279 attgacaccagggagaattgaacctaagaccttgag-aggagcacactccaaggtcccaagccaataccactaggccaaccca 25956360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 3280495 - 3280553
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||| ||||||||||||||| | ||||||||| ||||||||||| | |||||||    
T  3280495 tgagaccttgaggaggagcacactctcgggtcccaagccaataccaccatgtcaaccca 3280553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 4566434 - 4566496
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| || ||||  ||||||| |||||| ||||||||||||| |||||||||||    
T  4566434 aacctgagaccttgagaaggaatacactccaaggtccgaagtcaataccactaggccaaccca 4566496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 17041018 - 17041080
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||||||||| |||| ||||||| |||| |||| || ||||||||    
T  17041018 aacctgagaccttgaggaggagcacacttccagatcccaagccaatgccactagaccaaccca 17041080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 18363766 - 18363704
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| ||||||||||||||||||  || |||| | ||||||| |||||||||||    
T  18363766 aacctgagaccttgaggaggagcacactcccaaatctcaagcctataccactaggccaaccca 18363704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 18884415 - 18884473
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||| || |||||||||| |||||| |||||||||||||||  ||||||||    
T  18884415 tgagaccttaagaagaagcacactccgaggtccaaagtcaataccaccaaaccaaccca 18884473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 20335837 - 20335899
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||  |||||||||||||||||| |||||||| ||||||| | || ||||||||    
T  20335837 aacctgagacctcgaggaggagcacactcccaagtcccaagccaatacctctagaccaaccca 20335899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 29385749 - 29385811
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||||||||||| | |||||||| ||| |||| | ||||||||||    
T  29385749 aacctgagaccttgaggaggagcacactccaaagtcccaagccaacaccatccggccaaccca 29385811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 38374605 - 38374667
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| ||||||| |||||||||||||||  |||||||||| ||| ||||||| |||||||||    
T  38374605 aacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccaccacgccaaccca 38374667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 43663101 - 43663163
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||| ||  ||||||| ||| |||| ||||||||||||||||||| ||||||||||||    
T  43663101 aacctgagatctcgaggaggaccacgctcctaggtcccaagtcaataccatcaggccaaccca 43663163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 45709714 - 45709776
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||  ||||||||||||||| ||| |||||||  |||||||| |||||||||||    
T  45709714 aacctgagacctcgaggaggagcacactctcagatcccaagctaataccactaggccaaccca 45709776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 48125181 - 48125242
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||  ||||||||||||||| |||||||||| ||| |||||||| ||||||||    
T  48125181 aacctgagaccttc-ggaggagcacactccaaggtcccaagccaacaccaccagaccaaccca 48125242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 11765044 - 11765093
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaataccacca 89  Q
    |||||| || ||||||||||||||||||| |||| |||||||||||||||    
T  11765044 ctgagatctcaaggaggagcacactcccacgtccaaagtcaataccacca 11765093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 22927541 - 22927484
Alignment:
Q  42 gagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||| ||||| |||||||||| || |||||||| |||||||| |||||||||||    
T  22927541 gagacctttaggagaagcacactcctagatcccaagttaataccactaggccaaccca 22927484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 2446364 - 2446316
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||||||| |||||||| |||||||| ||| ||||||||    
T  2446364 aggaggagcacactcccaagtcccaagccaataccatcagaccaaccca 2446316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 20952169 - 20952217
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||||||||||||||||  |||||||| |||| |||||||    
T  20952169 aggaggagcacactcccaggtcccaaaccaataccatcaggtcaaccca 20952217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 21558198 - 21558139
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaac 96  Q
    ||||||||||||| |||||||||||| ||  |||| |||||||||||| |||| ||||||    
T  21558198 aacctgagaccttgaggaggagcacattcttaggttccaagtcaatactaccaagccaac 21558139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 33222464 - 33222390
Alignment:
Q  15 tcaaattgacaccaggaagcat--aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccac 87  Q
    |||||||||||||||  || ||  ||||||||||||| |||| ||| ||||| |||||||||||| |||||||||    
T  33222464 tcaaattgacaccagagagaatcgaacctgagaccttgaggatgagtacacttccaggtcccaagccaataccac 33222390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 33869427 - 33869513
Alignment:
Q  15 tcaaattgacaccaggaagcat--aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||||  || ||  |||| |||||||| || ||||||||||| ||||||| |||| |||||| || |||||||||||    
T  33869427 tcaaattgacaccagagagaatcgaaccagagaccttgagaaggagcacacttccaggtctcaagccaatactactaggccaaccca 33869513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 84
Target Start/End: Complemental strand, 48716346 - 48716303
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaatac 84  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||    
T  48716346 tgagaccttaaggaggaacacactcccagattccaagtcaatac 48716303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 7721435 - 7721389
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccac 87  Q
    ||||||||| |||||||| |||||||||||||||||  |||||||||    
T  7721435 tgagaccttgaggaggagtacactcccaggtcccaaaccaataccac 7721389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 24513867 - 24513805
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||| |||||| || |||||||||  || |||| ||||||||| |||||||||||    
T  24513867 aacctgagacctcaaggagaagtacactcccaaatctcaagccaataccactaggccaaccca 24513805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 25590681 - 25590619
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||| |||||||  ||||||||||||||||||| || |||| |||||||| |||| |||||||    
T  25590681 aacccgagacctcgaggaggagcacactcccagatctcaagccaataccaacaggtcaaccca 25590619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 25655234 - 25655284
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccac 87  Q
    ||||||| ||||| ||||||| ||||||| ||| |||||||||||||||||    
T  25655234 aacctgaaaccttgaggaggatcacactcacagatcccaagtcaataccac 25655284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 27445058 - 27445004
Alignment:
Q  45 accttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| ||||||||||||||| | |||||||||||||||||| || | |||||||    
T  27445058 accttgaggaggagcacactctctggtcccaagtcaataccatcatgtcaaccca 27445004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 27776242 - 27776180
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||| |  ||||||||||||||| || ||||||||   |||||||||||||||||||    
T  27776242 aacctgagacttcgaggaggagcacactctcaagtcccaagcgtataccaccaggccaaccca 27776180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 35119453 - 35119391
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||| | ||| |||| ||||| || ||||| ||||||||||||||||| |||||||||||    
T  35119453 aacctgaaatcttgaggatgagcatacacccagatcccaagtcaataccactaggccaaccca 35119391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 37085555 - 37085617
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||| ||||  |||| |||||||||||||  ||||||| ||||||||||| |||||||||    
T  37085555 aacctgaaacctcgaggatgagcacactcccaaatcccaagccaataccaccatgccaaccca 37085617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 42712024 - 42711966
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||| |||||||||||||||||| || |||||  |||||||| | |||||||||    
T  42712024 tgagaccttgaggaggagcacactcccatgtaccaagctaataccactaagccaaccca 42711966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 44628193 - 44628251
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||| || |||||||||||||||| ||||||||||  || | |||||||||||||||    
T  44628193 tgagactttgaggaggagcacactccaaggtcccaagctaacaacaccaggccaaccca 44628251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 27454785 - 27454744
Alignment:
Q  45 accttaaggaggagcacactcccaggtcccaagtcaatacca 86  Q
    ||||| ||||||||||||||| | ||||||||||||||||||    
T  27454785 accttgaggaggagcacactctctggtcccaagtcaatacca 27454744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 42262104 - 42262145
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaa 81  Q
    |||||||||| ||||||||||||||| ||| |||||||||||    
T  42262104 ctgagacctttaggaggagcacactctcagatcccaagtcaa 42262145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 2962529 - 2962469
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    ||||||||| ||| ||||||||||||||| ||||| ||||  ||||||||| || ||||||    
T  2962529 aacctgagatcttgaggaggagcacactcacaggttccaaaccaataccactagaccaacc 2962469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 7744118 - 7744178
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    ||||||||||||| |||||||||| | |||||| ||| ||| | ||||||| |||||||||    
T  7744118 aacctgagaccttgaggaggagcatagtcccagatcctaagcctataccactaggccaacc 7744178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 28236592 - 28236636
Alignment:
Q  42 gagaccttaaggaggagcacactcccaggtcccaagtcaatacca 86  Q
    |||||||  ||||||||| ||||||||||||||||| ||||||||    
T  28236592 gagacctcgaggaggagcgcactcccaggtcccaagccaatacca 28236636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 33460431 - 33460491
Alignment:
Q  40 ctgagacctt-aaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||| |||||||| |||||||| |||||||||  |||||||||||  ||||||||    
T  33460431 ctgagaccttgaaggaggaccacactcctaggtcccaaaccaataccaccaaaccaaccca 33460491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 35513522 - 35513474
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||||| || ||||||||  |||||||| |||||||||||    
T  35513522 aggaggagcacactctcaagtcccaagcaaataccactaggccaaccca 35513474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 3e-34; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 172 - 288
Target Start/End: Complemental strand, 27446427 - 27446318
Alignment:
Q  172 aatttccttctctttagcctccaaagttggtgcaaagttcaaagggttaaaaattccaccggggtaaccaacctcaccctttggcaaactgtattgcttg 271  Q
    |||||||||||||||||||||||||||||||||||||       ||||||| ||||||  ||||||||||||||||||||||||||| ||||||||||||    
T  27446427 aatttccttctctttagcctccaaagttggtgcaaag-------ggttaaatattccattggggtaaccaacctcaccctttggcaagctgtattgcttg 27446335  T
Q  272 aagataggatcttggtt 288  Q
    |||||||||||||||||    
T  27446334 aagataggatcttggtt 27446318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 6385932 - 6385881
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccacc 88  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6385932 aacctgagaccttaaggaggagcacagtcccaggtcccaagtcaataccacc 6385881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 10338180 - 10338242
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||||||||| |||||||||    
T  10338180 aacctgagaccttgaggaggagcacactcctaggtcccaagccaataccaccatgccaaccca 10338242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 33549174 - 33549112
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||  ||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  33549174 aacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaaccca 33549112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 34444873 - 34444811
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||  ||||||||||||||  ||||||||||||||||||||||||||||||||    
T  34444873 aacctgagaccttggggaggagcacactctaaggtcccaagtcaataccaccaggccaaccca 34444811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 12234513 - 12234573
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    ||||||||||||  ||  |||||||||||||||||||||||||||||||||||||||||||    
T  12234513 aacctgagacctcgagagggagcacactcccaggtcccaagtcaataccaccaggccaacc 12234573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 45 - 99
Target Start/End: Original strand, 12188317 - 12188371
Alignment:
Q  45 accttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  12188317 accttgaggaggagcacactcccaggtcccaagccaataccactaggccaaccca 12188371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 14278117 - 14278178
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||||||||||||| ||||||||||||| ||| ||||| |||||||||||||||    
T  14278117 aacctgagaccttaaggaggagcgcactcccaggtccaaagccaata-caccaggccaaccca 14278178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 31622997 - 31623059
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||  ||||||||||||||||||||||||||| |||||||||| | ||||||||    
T  31622997 aacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccggaccaaccca 31623059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 21418526 - 21418478
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||||    
T  21418526 aggaggagcacactcccaagtcccaagccaataccaccaggccaaccca 21418478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 24641210 - 24641258
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  24641210 aggaggagcacactcccagatcccaagtcaataccaccaagccaaccca 24641258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 32613150 - 32613208
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| ||| || ||||||||||||||||  ||||||||||||||||||||||||||||    
T  32613150 tgagatcttgagaaggagcacactcccagaccccaagtcaataccaccaggccaaccca 32613208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 23910117 - 23910158
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagt 78  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  23910117 aacctgagaccttgaggaggagcacactcccaggtcccaagt 23910158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 6776627 - 6776675
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| ||||| ||||||| |||||||||||||||||||||    
T  6776627 aggaggagcacacccccagatcccaagccaataccaccaggccaaccca 6776675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 6691557 - 6691618
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| || ||||||||||||| |||||  ||||||| |||||||||||||||||    
T  6691557 aacctgagaccttgag-aggagcacactccaaggtctaaagtcaacaccaccaggccaaccca 6691618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 14558032 - 14557970
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||   |||||||||||||| |||||||||||| ||| |||||||| ||||||||    
T  14558032 aacctgagacccggaggaggagcacacttccaggtcccaagccaacaccaccagaccaaccca 14557970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 30127470 - 30127408
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||  | |||||||||||||||||  |||||| |||||||||||| ||||||||    
T  30127470 aacctgagacctcgaagaggagcacactcccagaccccaagccaataccaccagaccaaccca 30127408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 20213111 - 20213071
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaag 77  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  20213111 aacctgagacattgaggaggagcacactcccaggtcccaag 20213071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 22107134 - 22107094
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaag 77  Q
    |||||||||| || |||||||||||||||||||||||||||    
T  22107134 aacctgagacattgaggaggagcacactcccaggtcccaag 22107094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 24507548 - 24507604
Alignment:
Q  43 agaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||| |||||||||| ||||| |||||||||| ||| ||||| |||||||||||    
T  24507548 agaccttgaggaggagcaaactccaaggtcccaagccaacaccactaggccaaccca 24507604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 99
Target Start/End: Complemental strand, 13441101 - 13441058
Alignment:
Q  56 gagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||||||||||| |||||||||| | ||||||||    
T  13441101 gagcacactcccaggtcccaagccaataccacccgaccaaccca 13441058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 11423636 - 11423574
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||  ||||| |||| |||||||  |||||||||||||||||||| ||| ||||    
T  11423636 aacctgagacctcgaggagaagcatactcccaaatcccaagtcaataccaccagaccagccca 11423574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 28028584 - 28028538
Alignment:
Q  53 gaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||| |||||  |||||||||||||| |||||||||||||||||    
T  28028584 gaggagctcactcaaaggtcccaagtcaacaccaccaggccaaccca 28028538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 3779406 - 3779349
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    |||||||||| || ||||||||||||||| ||| |||| ||||||||| ||| |||||    
T  3779406 ctgagaccttgagaaggagcacactcccaagtctcaagccaataccactaggtcaacc 3779349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 12216814 - 12216753
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccc 98  Q
    ||||||||||||  || ||||||||| || ||||||||||  |||||||||||| |||||||    
T  12216814 aacctgagacctcgagaaggagcacattcgcaggtcccaaaccaataccaccagaccaaccc 12216753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 20863442 - 20863393
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaataccacca 89  Q
    |||||||||| |||||||||||||||| | |||||||| ||| |||||||    
T  20863442 ctgagaccttgaggaggagcacactccaaagtcccaagccaacaccacca 20863393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 9433610 - 9433646
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccac 87  Q
    |||| |||||||||||||| |||||||||||||||||    
T  9433610 aggaagagcacactcccagatcccaagtcaataccac 9433646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 28364004 - 28363948
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaac 96  Q
    |||||||||| ||||||||||||||| ||| ||||||  ||||||||| | ||||||    
T  28364004 ctgagaccttgaggaggagcacactcgcagatcccaaaccaataccactatgccaac 28363948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 6e-20; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 37109357 - 37109419
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  37109357 aacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaaccca 37109419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 49576900 - 49576962
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||||||||||||| |||| ||| |||||||||||||||||||||    
T  49576900 aacctgagaccttgaggaggagcacactcccaagtccaaagccaataccaccaggccaaccca 49576962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 19238583 - 19238645
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||| |||||||  |||||||||||||||||| |||||||| |||||||||||||||||||||    
T  19238583 aacccgagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaaccca 19238645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 37720220 - 37720282
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||| |||||| |||||| |||||||||||||||||||| ||||| |||||||||||||||    
T  37720220 aacctgggaccttgaggaggggcacactcccaggtcccaagccaataacaccaggccaaccca 37720282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 55427206 - 55427268
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||  || ||||||| |||||||||||||||| |||||||||||||||||||||    
T  55427206 aacctgagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggccaaccca 55427268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 24827895 - 24827835
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    ||||||||||||  ||||||||| |||||||||||||||||||||||||||| | ||||||    
T  24827895 aacctgagacctcgaggaggagcgcactcccaggtcccaagtcaataccaccggaccaacc 24827835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 38869838 - 38869783
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggc 92  Q
    ||||||||||||| ||||||||||||||||||| ||||||| ||||||||| ||||    
T  38869838 aacctgagaccttgaggaggagcacactcccagatcccaagccaataccactaggc 38869783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 5795415 - 5795477
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||||| ||||| |||| ||||||||| |||||||| ||||||||    
T  5795415 aacctgagaccttgaggaggagcatactccaaggtgccaagtcaacaccaccagaccaaccca 5795477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 7292804 - 7292866
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||| || ||||||||||||||||||||| ||||| ||||||||| || ||||||||    
T  7292804 aacctgagactttgaggaggagcacactcccaggttccaagccaataccactagaccaaccca 7292866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 7949460 - 7949522
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||||||| | |||||| ||||    
T  7949460 aacctgagaccttgaggaggagcacactccgaggtcccaagccaataccgctaggccagccca 7949522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 23378026 - 23377980
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaata 83  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||    
T  23378026 aacctgagaccttgaggaggagcacactcccaggtcccaagccaata 23377980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 28635766 - 28635704
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| ||||||  ||||||||||||||||||| |||||||||| |||||||||| |||||||    
T  28635766 aacctaagacctccaggaggagcacactcccagatcccaagtcagtaccaccaggacaaccca 28635704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 95
Target Start/End: Complemental strand, 47044787 - 47044729
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaa 95  Q
    ||||||||||||  |||||||||| |||| ||| |||||||||||||||||||||||||    
T  47044787 aacctgagacctcgaggaggagcaaactctcagatcccaagtcaataccaccaggccaa 47044729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 51250532 - 51250590
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| ||| ||| ||||||||||||||| ||||||| |||||||||||||||||||||    
T  51250532 tgagatcttgaggcggagcacactcccagatcccaagccaataccaccaggccaaccca 51250590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 31759667 - 31759714
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaataccac 87  Q
    |||||||||| |||||||||||||||||| |||||||| |||||||||    
T  31759667 ctgagaccttgaggaggagcacactcccaagtcccaagccaataccac 31759714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 37274465 - 37274528
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaa-taccaccaggccaaccca 99  Q
    ||||| ||||||| ||||||||||||||||||||||||||| ||| ||| || |||||||||||    
T  37274465 aacctaagaccttgaggaggagcacactcccaggtcccaagccaattacgactaggccaaccca 37274528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 46545778 - 46545719
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||| ||| ||||||||||||||| |||||| |||| ||||||||| |||||||||||    
T  46545778 ctgagatcttgaggaggagcacactctcaggtctcaagccaataccactaggccaaccca 46545719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 9241031 - 9241093
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| ||||||  || ||||||||||| |||| ||||||| |||||||||||||||||||||    
T  9241031 aacctcagacctcgagcaggagcacactaccagatcccaagccaataccaccaggccaaccca 9241093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 13901808 - 13901750
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||| |||||||| |||||||||||||| |||| ||||||||| || ||||||||    
T  13901808 tgagacctcaaggaggaacacactcccaggtctcaagccaataccactagaccaaccca 13901750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 16581763 - 16581713
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccac 87  Q
    ||||||||||||| |||||||||| |||||||||| ||||| |||||||||    
T  16581763 aacctgagaccttgaggaggagcagactcccaggttccaagccaataccac 16581713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 21660154 - 21660212
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||  |||| |||||||||||||| || ||||||||||||||||| ||||||||    
T  21660154 tgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagaccaaccca 21660212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 21668918 - 21668976
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||  |||| |||||||||||||| || ||||||||||||||||| ||||||||    
T  21668918 tgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagaccaaccca 21668976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 24234711 - 24234653
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||| |||| ||||||||||||| |||||||| |||||||||| || |||||||    
T  24234711 tgagaccttcaggatgagcacactcccaagtcccaagccaataccacctggacaaccca 24234653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 29195149 - 29195103
Alignment:
Q  53 gaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||| |||||||||| ||| |||||||||||||||||    
T  29195149 gaggagcacactccaaggtcccaagccaacaccaccaggccaaccca 29195103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 37980154 - 37980215
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| || ||||||||||||| |||||||||| ||| | |||||||||||||||    
T  37980154 aacctgagaccttgag-aggagcacactccaaggtcccaagccaacatcaccaggccaaccca 37980215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 43728465 - 43728403
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||| || ||||||||||||||||||| ||  |||||||||||||||  ||||||||    
T  43728465 aacctgagactttgaggaggagcacactcccagatcataagtcaataccaccataccaaccca 43728403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 51948550 - 51948488
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||  |||||| ||||||||| || |||||||||||||| |||||| |||||||    
T  51948550 aacctgagacctcgaggaggggcacactcctagatcccaagtcaatactaccaggacaaccca 51948488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 2185038 - 2185099
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccc 98  Q
    |||||||||| || || |||||||||||||||||| ||||| || |||||| ||||||||||    
T  2185038 aacctgagactttgagaaggagcacactcccaggttccaagccattaccactaggccaaccc 2185099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 39030135 - 39030180
Alignment:
Q  53 gaggagcacactcccaggtcccaagtcaataccaccaggccaaccc 98  Q
    |||||||||||||| |||||||||| ||| ||||||||||||||||    
T  39030135 gaggagcacactccaaggtcccaagccaacaccaccaggccaaccc 39030180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 56236932 - 56236981
Alignment:
Q  48 ttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    |||| ||||||||||||||||  |||||||||||||||||||| ||||||    
T  56236932 ttaaagaggagcacactcccatatcccaagtcaataccaccagaccaacc 56236981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 9936981 - 9937029
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||||||| ||| |||||| ||||||| |||||||||||    
T  9936981 aggaggagcacactcccaagtctcaagtcgataccactaggccaaccca 9937029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 13265117 - 13265173
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaac 96  Q
    |||| ||| |||||||||||||| |||||||||||||| ||||||| | ||||||||    
T  13265117 ctgaaaccataaggaggagcacattcccaggtcccaagccaatacctctaggccaac 13265173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 17618347 - 17618299
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccacca 89  Q
    ||||||||  |||||||||||||||||||||| |||| |||||||||||    
T  17618347 tgagacctcgaggaggagcacactcccaggtctcaagccaataccacca 17618299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 46295167 - 46295107
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    ||||||||||||| |||||||||||||||| | |||||||| ||| || ||||| ||||||    
T  46295167 aacctgagaccttgaggaggagcacactccaatgtcccaagccaacactaccagaccaacc 46295107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 46329234 - 46329194
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaag 77  Q
    ||||||| ||||| |||||||||||||||||||||||||||    
T  46329234 aacctgataccttgaggaggagcacactcccaggtcccaag 46329194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 51747900 - 51747844
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    ||||||||||||||||||||||||| || |||  |||||||||||| || |||||||    
T  51747900 tgagaccttaaggaggagcacactctcatgtcttaagtcaataccatcatgccaacc 51747844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 51954184 - 51954132
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccacca 89  Q
    ||||||||||||  |||||||||| ||||||| ||||||||||||| ||||||    
T  51954184 aacctgagacctcgaggaggagcatactcccaagtcccaagtcaatgccacca 51954132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 52254409 - 52254469
Alignment:
Q  36 taacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaac 96  Q
    |||||||| |||| |||||||||||||||| ||  |||||||||||||||| ||| |||||    
T  52254409 taacctgaaacctcaaggaggagcacactctcatatcccaagtcaataccatcagaccaac 52254469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 1730498 - 1730557
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||| || | ||||||||||||| ||||||||||| ||||||||| ||| |||||||    
T  1730498 ctgagactttgaagaggagcacactctcaggtcccaagccaataccactaggtcaaccca 1730557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 4688631 - 4688580
Alignment:
Q  39 cctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccag 90  Q
    ||||| |||| |||||||| |||| |||||||||||||| ||||||||||||    
T  4688631 cctgaaacctcaaggaggatcacattcccaggtcccaagccaataccaccag 4688580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 97
Target Start/End: Original strand, 30557293 - 30557336
Alignment:
Q  54 aggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    ||||||||||||| | ||||||||||||||||||||| ||||||    
T  30557293 aggagcacactcctacgtcccaagtcaataccaccagaccaacc 30557336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 95
Target Start/End: Complemental strand, 4249247 - 4249189
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaa 95  Q
    ||||||||||||| |||||||||||||||| |  ||||||| | ||||||| |||||||    
T  4249247 aacctgagaccttgaggaggagcacactccaaaatcccaagcctataccactaggccaa 4249189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 4483307 - 4483353
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaata 83  Q
    ||||||||||||| ||||||| || |||| |||||||||||||||||    
T  4483307 aacctgagaccttgaggaggatcagactctcaggtcccaagtcaata 4483353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 8030214 - 8030260
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccac 87  Q
    ||||||||| |||||||||||||||||| |||||||| | |||||||    
T  8030214 tgagaccttgaggaggagcacactcccaagtcccaagcctataccac 8030260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 11592159 - 11592209
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccac 87  Q
    ||||| ||||||  ||||||||||||||| ||||||||||| |||||||||    
T  11592159 aacctaagacctggaggaggagcacactctcaggtcccaaggcaataccac 11592209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 12822035 - 12821977
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccc 98  Q
    |||||||||| |  |||||||||||||||| ||||||||||||| |||||  |||||||    
T  12822035 ctgagaccttgaacaggagcacactcccagatcccaagtcaatatcaccaaaccaaccc 12821977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 13496295 - 13496249
Alignment:
Q  53 gaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| ||||||| || |||||||||||||||||||| |||||||||    
T  13496295 gaggaacacactcacatgtcccaagtcaataccaccatgccaaccca 13496249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 19680794 - 19680852
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaa 95  Q
    ||||| ||||||| |||| ||||||||||||| ||||||||  |||||||| |||||||    
T  19680794 aacctaagaccttgaggaagagcacactcccaagtcccaagcgaataccactaggccaa 19680852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 20281198 - 20281260
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||| |||||| ||||||||||| ||| ||  |||||||||||||||||| | ||||||||    
T  20281198 aacctgggaccttgaggaggagcacgctctcaattcccaagtcaataccaccggaccaaccca 20281260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 38206132 - 38206193
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| || ||||||||||||| |||||||||| ||  ||||||||| |||||||    
T  38206132 aacctgagaccttgag-aggagcacactccaaggtcccaagccagcaccaccaggtcaaccca 38206193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 39509140 - 39509078
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||  ||||||||||||||||||| ||||||| || |||||  || ||||||||    
T  39509140 aacctgagacctcgaggaggagcacactcccagatcccaagccattaccatgagaccaaccca 39509078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 40283992 - 40284054
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| ||||||| |||||  ||||||||||| |||||||| |||||||| || |||||||||    
T  40283992 aaccttagaccttgaggagatgcacactcccaagtcccaagccaataccatcatgccaaccca 40284054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 42281240 - 42281301
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| || ||||||||||| | |||||||||| ||| |||||| ||||||||||    
T  42281240 aacctgagaccttgag-aggagcacactacaaggtcccaagccaacaccacctggccaaccca 42281301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 56410020 - 56409959
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| || ||||||||||||| |||||||||| ||| | |||||||||| ||||    
T  56410020 aacctgagaccttgag-aggagcacactccaaggtcccaagccaacagcaccaggccagccca 56409959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 2622401 - 2622467
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaat----accaccaggccaaccca 99  Q
    |||||||||| |  ||||||||||||||||||||||||||| ||||    ||||| |||||||||||    
T  2622401 aacctgagacatggaggaggagcacactcccaggtcccaagccaattaataccactaggccaaccca 2622467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 27965537 - 27965578
Alignment:
Q  58 gcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||| ||||||| ||||||||| |||||||||||    
T  27965537 gcacactcccagatcccaagccaataccactaggccaaccca 27965578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 29312271 - 29312320
Alignment:
Q  50 aaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||| |||||||||  ||||||| ||||||||| |||||||||||    
T  29312271 aaggaggagaacactcccacatcccaagccaataccactaggccaaccca 29312320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 77
Target Start/End: Complemental strand, 32992706 - 32992642
Alignment:
Q  15 tcaaattgacaccaggaagcat--aacctgagaccttaaggaggagcacactcccaggtcccaag 77  Q
    ||||||||||||| || || ||  ||| ||||||||| |||||||||||||||| ||||||||||    
T  32992706 tcaaattgacaccggggagaatcgaacttgagaccttgaggaggagcacactccaaggtcccaag 32992642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 40285687 - 40285634
Alignment:
Q  43 agaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaac 96  Q
    |||||| || ||||||||||||||||| | |||| |||||||||||| ||||||    
T  40285687 agacctcaaagaggagcacactcccagattccaaatcaataccaccatgccaac 40285634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 53496944 - 53496899
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaatacc 85  Q
    ||||||| || ||||||||||||||||||||||||||  |||||||    
T  53496944 ctgagactttgaggaggagcacactcccaggtcccaaaccaatacc 53496899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 13015483 - 13015447
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccac 87  Q
    |||||||||||||||||| |||||||| |||||||||    
T  13015483 aggaggagcacactcccaagtcccaagccaataccac 13015447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 26489895 - 26489935
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccagg 91  Q
    |||| |||||||||| ||||||| |||||||||||||||||    
T  26489895 aggaagagcacactctcaggtccaaagtcaataccaccagg 26489935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 77
Target Start/End: Original strand, 47202433 - 47202469
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaag 77  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  47202433 tgagaccttgaggaggagcacactcccaggttccaag 47202469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 9e-19; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 2203560 - 2203500
Alignment:
Q  39 cctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  2203560 cctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaaccca 2203500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 968432 - 968373
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaac 96  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||    
T  968432 aacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccaggccaac 968373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 3624650 - 3624588
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| | ||||||||||||||||||||||||| ||||||||| |||||||||||    
T  3624650 aacctgagaccttgaagaggagcacactcccaggtcccaagccaataccactaggccaaccca 3624588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 16852410 - 16852348
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||  ||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  16852410 aacctgagacctcgaggaggagcacactcccaggtcccaagccaataccactaggccaaccca 16852348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 19703493 - 19703555
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| ||||||||||||||| ||||||||||| ||||||||| |||||||||||    
T  19703493 aacctgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaaccca 19703555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 23361655 - 23361717
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| ||||||||||||||||||  ||||||||||||||||||||| |||||||    
T  23361655 aacctgagaccttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaaccca 23361717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 26688935 - 26688873
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||||||||||| |||||||||| ||| |||||||||||||||||    
T  26688935 aacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggccaaccca 26688873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 52 - 99
Target Start/End: Original strand, 20994479 - 20994526
Alignment:
Q  52 ggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||    
T  20994479 ggaggagcacactcccaggtcccaagtcaataccactaggccaaccca 20994526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 18540368 - 18540306
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| ||||| || |||||||||||||||||| ||||||||| |||||||||||    
T  18540368 aacctgagaccttgaggagaagtacactcccaggtcccaagccaataccactaggccaaccca 18540306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 28783126 - 28783068
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||| |||||||||||||||||||||| |||| ||||||||||| |||||||||    
T  28783126 tgagaccttgaggaggagcacactcccaggtctcaagccaataccaccaagccaaccca 28783068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 29431081 - 29431019
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||| ||| ||||||||||||||||||| |||||||| ||||||| |||||||||||||    
T  29431081 aacctgaggcctcaaggaggagcacactcccaagtcccaagccaataccgccaggccaaccca 29431019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 95
Target Start/End: Original strand, 29858055 - 29858113
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaa 95  Q
    ||||||||||||  ||||||||||||||||| ||||||||| |||||||||||||||||    
T  29858055 aacctgagacctcgaggaggagcacactccctggtcccaagccaataccaccaggccaa 29858113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 44780120 - 44780182
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||||||||||||| |||||||| |||| |||| |||||||||||    
T  44780120 aacctgagaccttgaggaggagcacactcccaagtcccaagccaatgccactaggccaaccca 44780182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 32157247 - 32157199
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  32157247 aggaggagcatactccaaggtcccaagtcaataccaccaggccaaccca 32157199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 6536590 - 6536540
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccac 87  Q
    ||||||||||||| |||||||||||||||| |||||||||| |||||||||    
T  6536590 aacctgagaccttgaggaggagcacactcctaggtcccaagccaataccac 6536540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 8485065 - 8485007
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||| || ||||||||||||| |||||||||||  ||||||||||||||||||||    
T  8485065 tgagacctcaaagaggagcacactcacaggtcccaagcaaataccaccaggccaaccca 8485007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 11819846 - 11819784
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||||||||||||| |||||||| | ||||||| ||| |||||||    
T  11819846 aacctgagaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaaccca 11819784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 27750800 - 27750738
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||||||||||||| |||||||| | ||||||| ||| |||||||    
T  27750800 aacctgagaccttgaggaggagcacactcccaagtcccaagcctataccacgagggcaaccca 27750738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 5264611 - 5264552
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||  |||||||||||| |||||||| ||||| ||||||||| |||||||||||    
T  5264611 ctgagacctcgaggaggagcacattcccaggttccaagccaataccactaggccaaccca 5264552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 6436564 - 6436623
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||  ||||||||||||||| | |||||||| ||||||||||||| |||||||    
T  6436564 ctgagaccttgcggaggagcacactcctaagtcccaagccaataccaccagggcaaccca 6436623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 8059726 - 8059640
Alignment:
Q  15 tcaaattgacaccaggaagcat--aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||| |||| || ||  ||||||||||||| ||||||| ||||||| ||  | |||||||||||||| ||||||||||||    
T  8059726 tcaaattgacatcagggagaatggaacctgagaccttgaggaggatcacactctcacatgccaagtcaataccatcaggccaaccca 8059640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 28750634 - 28750580
Alignment:
Q  43 agaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccc 98  Q
    ||||||||||||||||| ||||||||| | |||||| |||||||||||||||||||    
T  28750634 agaccttaaggaggagcgcactcccagattccaagt-aataccaccaggccaaccc 28750580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 35690070 - 35690129
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaac 96  Q
    ||||||||||||| |||||||||| || ||||| ||||||| ||||||||| ||||||||    
T  35690070 aacctgagaccttgaggaggagcaaacacccagatcccaagccaataccactaggccaac 35690129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 6530861 - 6530815
Alignment:
Q  53 gaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||| |||||||||| ||| |||||||||||||||||    
T  6530861 gaggagcacactcctaggtcccaagccaacaccaccaggccaaccca 6530815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 95
Target Start/End: Complemental strand, 12988498 - 12988440
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaa 95  Q
    ||||||| ||||| |||||||||||||| |||||| ||||| ||||||||| |||||||    
T  12988498 aacctgaaaccttgaggaggagcacacttccaggttccaagccaataccactaggccaa 12988440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 22193370 - 22193420
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccac 87  Q
    ||||| ||||||| |||||||||||||||||||| |||||||||| |||||    
T  22193370 aacctaagaccttgaggaggagcacactcccaggccccaagtcaacaccac 22193420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 23874388 - 23874450
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||  |||||| ||| | |||||||||||||| ||||||||| |||||||||||    
T  23874388 aacctgagacctcgaggaggcgcagattcccaggtcccaagccaataccactaggccaaccca 23874450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 33017284 - 33017222
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||||||||| |||||| ||||| |||||  || |||||||||||    
T  33017284 aacctgagaccttgaggaggagcacacttccaggttccaagccaatatgacaaggccaaccca 33017222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 18897258 - 18897174
Alignment:
Q  17 aaattgacaccaggaagcat--aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||| |||||||||| ||  ||| ||||||||| |||||||||||||||  |||||||||  ||| ||||| |||||||||||    
T  18897258 aaattggcaccaggaagaatcgaacatgagaccttgaggaggagcacactctaaggtcccaaaccaacaccactaggccaaccca 18897174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 6569785 - 6569837
Alignment:
Q  45 accttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    |||| |||||||||||||||||||| ||||||| ||||| ||| |||||||||    
T  6569785 acctaaaggaggagcacactcccagatcccaagccaatatcactaggccaacc 6569837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 99
Target Start/End: Original strand, 22268958 - 22269001
Alignment:
Q  56 gagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||| |||||||||| ||| |||||||||||||||||    
T  22268958 gagcacactccaaggtcccaagccaacaccaccaggccaaccca 22269001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 35826370 - 35826319
Alignment:
Q  48 ttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||||||| |||||| |||| || |||||| |||||||||||    
T  35826370 ttaaggaggagcacactcacaggtctcaagccactaccactaggccaaccca 35826319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 40591786 - 40591743
Alignment:
Q  53 gaggagcacactcccaggtcccaagtcaataccaccaggccaac 96  Q
    |||||||||||||||| |||| ||| ||||||||||||||||||    
T  40591786 gaggagcacactcccaagtccgaagccaataccaccaggccaac 40591743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 3058055 - 3058117
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||   |||||||||||||||| | |||||  |||||||||||| ||||||||    
T  3058055 aacctgagaccttgcagaggagcacactcccaagacccaaaccaataccaccagaccaaccca 3058117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 4830557 - 4830495
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||  ||||||| ||||||| ||| ||||||   ||||||||||||||||||||    
T  4830557 aacctgagacctcgaggaggaacacactctcagatcccaaacaaataccaccaggccaaccca 4830495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 8794351 - 8794401
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccac 87  Q
    ||||||||||| | |||||||||||||| |||||| ||||| |||||||||    
T  8794351 aacctgagaccctgaggaggagcacacttccaggttccaagccaataccac 8794401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 11793527 - 11793589
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| ||||||| |||||||||||||||| ||||||||||  || ||||| || ||||||||    
T  11793527 aacctaagaccttgaggaggagcacactccaaggtcccaagcgaacaccacaagaccaaccca 11793589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 30483890 - 30483952
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||  | ||||||||||||||||||  ||||||| |||||||||  ||||||||||    
T  30483890 aacctgagactctgaggaggagcacactcccatatcccaagccaataccactgggccaaccca 30483952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 36043051 - 36042989
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||| |||| |||||| |||||||||| |  ||||| |||||||||||| ||||||||    
T  36043051 aacctgagatcttacggaggaacacactcccaagatccaagccaataccaccagcccaaccca 36042989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 4436042 - 4435985
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    |||||||||| ||||||||||| |||||| ||| |||| |||||||| |||| |||||    
T  4436042 ctgagaccttgaggaggagcactctcccatgtctcaagccaataccagcaggtcaacc 4435985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 37 - 77
Target Start/End: Original strand, 3524407 - 3524447
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaag 77  Q
    ||||| ||||||| |||||||||||||||| ||||||||||    
T  3524407 aacctaagaccttgaggaggagcacactccaaggtcccaag 3524447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 7140765 - 7140725
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccagg 91  Q
    ||||||||||||| ||||| ||||||| |||||||||||||    
T  7140765 aggaggagcacacacccagatcccaagccaataccaccagg 7140725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 7526699 - 7526743
Alignment:
Q  43 agaccttaaggaggagcacactcccaggtcccaagtcaataccac 87  Q
    ||||||||||||||| |||||||| | || |||||||||||||||    
T  7526699 agaccttaaggaggaacacactcctaagtaccaagtcaataccac 7526743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 18546368 - 18546428
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    ||||||||||||  ||||||||||  ||| |||||||||| |||||||||| || ||||||    
T  18546368 aacctgagacctcgaggaggagcatgctctcaggtcccaaatcaataccactagaccaacc 18546428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 3e-18; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 16773877 - 16773818
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaac 96  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||    
T  16773877 aacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccagaccaac 16773818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 21549147 - 21549205
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  21549147 tgagactttaaggaggagcacactcccaggtcccaagccaataccactaggccaaccca 21549205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 30109314 - 30109376
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||| ||||||||||||||||||||||| |||| ||||||||||| |||||||||    
T  30109314 aacctgagacctcaaggaggagcacactcccaggtcacaagccaataccaccaagccaaccca 30109376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 16457876 - 16457820
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    ||||||||| |||||||||||||||| |||||||||| |||||||||||||||||||    
T  16457876 tgagaccttgaggaggagcacactccaaggtcccaagccaataccaccaggccaacc 16457820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 14495814 - 14495873
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||  ||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  14495814 ctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaaccca 14495873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 25627151 - 25627065
Alignment:
Q  15 tcaaattgacaccaggaagcat--aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||||  || ||  ||||||||||||| |||||||||||||||||| || ||||| ||||||||| |||||||||||    
T  25627151 tcaaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaaccca 25627065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 30883208 - 30883266
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||| || ||||||||    
T  30883208 tgagaccttgaggaggagcacactcccaggtcccaagccaataccactagaccaaccca 30883266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 87429 - 87489
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    ||||||||||||| ||||||||||||||||||| | ||||| ||||||||| |||||||||    
T  87429 aacctgagaccttgaggaggagcacactcccagattccaaggcaataccactaggccaacc 87489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 1410668 - 1410727
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||  ||||||||||||||||||  |||||||||||||||||||| ||||||||    
T  1410668 ctgagacctcgaggaggagcacactcccatatcccaagtcaataccaccagaccaaccca 1410727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 892480 - 892542
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||| ||||||  |||||||||| ||||||||| |||||||||||    
T  892480 aacctgagaccttgaggaggagtacactctgaggtcccaagccaataccactaggccaaccca 892542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 14285231 - 14285169
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| ||||||||||||||||||||| ||||| |||| ||||  ||||||||||    
T  14285231 aacctgagaccttgaggaggagcacactcccaggttccaagccaattccactcggccaaccca 14285169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 21589358 - 21589296
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||| |  ||||| |||| |||||||||||||||| |||||||||||||||||||||    
T  21589358 aacctgagacatcgaggagtagcagactcccaggtcccaagccaataccaccaggccaaccca 21589296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 29692392 - 29692454
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||| || ||||||||||||||||||| ||||||  |||||||||||| ||||||||    
T  29692392 aacctgagactttgaggaggagcacactcccagatcccaatccaataccaccagaccaaccca 29692454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 34984876 - 34984814
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| ||||||| ||||||||||||||||||||| ||||| ||||||||| || ||||||||    
T  34984876 aacctaagaccttgaggaggagcacactcccaggttccaagccaataccactagaccaaccca 34984814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 7918475 - 7918537
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| ||||||| ||||||||  ||||||||||| ||||| ||||||||| |||||||||||    
T  7918475 aacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaaccca 7918537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 15641812 - 15641858
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    |||| ||||||||||||||||||||||||||||||| | ||||||||    
T  15641812 aggacgagcacactcccaggtcccaagtcaataccatcgggccaacc 15641858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 16436683 - 16436626
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||| |||||||||||||||| || ||||||| ||||||||| |||||||||||    
T  16436683 tgagaccttgaggaggagcacactccaag-tcccaagccaataccactaggccaaccca 16436626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 17028270 - 17028332
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||||||||||||| |||||||  |||||| || ||| |||||||    
T  17028270 aacctgagaccttgaggaggagcacactcccaagtcccaacccaatacaactaggtcaaccca 17028332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 37148096 - 37148046
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccac 87  Q
    ||||||||||||| ||||||||||||||| |||||| || |||||||||||    
T  37148096 aacctgagaccttgaggaggagcacactcacaggtctcaggtcaataccac 37148046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 43241688 - 43241750
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||| ||||| | ||||||||| || ||||||||||||||||| || ||||||||    
T  43241688 aacctgagacctcaaggaagggcacactccaagatcccaagtcaataccactagaccaaccca 43241750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 8278295 - 8278343
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||||||| |||||||| |||||||| ||| ||||||||    
T  8278295 aggaggagcacactcccaagtcccaagccaataccatcagaccaaccca 8278343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 29075837 - 29075789
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||||||||| ||||||| ||||||||| |||| ||||||    
T  29075837 aggaggagcacactcccagatcccaagccaataccactaggcaaaccca 29075789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 72
Target Start/End: Original strand, 3584691 - 3584726
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtc 72  Q
    |||||||||||||||||||||||||||||| |||||    
T  3584691 aacctgagaccttaaggaggagcacactccaaggtc 3584726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 76
Target Start/End: Original strand, 4793094 - 4793133
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaa 76  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  4793094 aacctgagacctcgaggaggagcacactcccaggtcccaa 4793133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 22020871 - 22020930
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||| | |||||||||||||||||||| |||||||  |||||||| | |||||||||    
T  22020871 ctgagacttcaaggaggagcacactcccagatcccaagctaataccactatgccaaccca 22020930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 40461618 - 40461681
Alignment:
Q  36 taacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||| ||||| ||||||||| || ||| ||||| |||||||||||  |||||||    
T  40461618 taacctgagaccttgaggagaagcacactctcaagtctcaagttaataccaccagatcaaccca 40461681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 43442266 - 43442207
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaac 96  Q
    ||||||||||||| ||||||||||||||||||| || |||  ||||||||| | ||||||    
T  43442266 aacctgagaccttgaggaggagcacactcccagatctcaaaccaataccactatgccaac 43442207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 6844799 - 6844737
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| ||||||  ||||||| ||||||||||  | |||||||||||||||| ||||||||||    
T  6844799 aaccttagacctcgaggaggaacacactcccaaattccaagtcaataccacctggccaaccca 6844737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 9842852 - 9842898
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaata 83  Q
    |||| |||||||  |||||||||||||||||| ||||||||||||||    
T  9842852 aacccgagacctcgaggaggagcacactcccaagtcccaagtcaata 9842898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 16172990 - 16173051
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| || ||||||||||||| ||||| |||| ||| || ||||||||||||||    
T  16172990 aacctgagaccttgag-aggagcacactccaaggtctcaagccaacactaccaggccaaccca 16173051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 18437141 - 18437095
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    ||||||||||||||| || ||||||||| |||||||| |||||||||    
T  18437141 aggaggagcacactctcaagtcccaagttaataccactaggccaacc 18437095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 18596007 - 18596057
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccac 87  Q
    ||||| ||||||| |||||||||||| ||||||||| |||| |||||||||    
T  18596007 aacctaagaccttgaggaggagcacattcccaggtcacaagccaataccac 18596057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 19043528 - 19043466
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||| || || |||| |||||||||| || ||||||||||| ||| |||||||||||    
T  19043528 aacctgagactttgagaaggaacacactcccaagttccaagtcaatagcactaggccaaccca 19043466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 22737152 - 22737090
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||| ||  ||||||||||||| ||| |||||||| ||||||||| || ||||||||    
T  22737152 aacctgagacattggggaggagcacacttccaagtcccaagccaataccactagaccaaccca 22737090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 26078057 - 26078119
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| | ||| |||| ||||||| |||||||  ||||||||| |||||||||||    
T  26078057 aacctgagaccttgaagagaagcatactcccaagtcccaaaccaataccactaggccaaccca 26078119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 84890 - 84854
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaag 77  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  84890 tgagaccttgaggaggagcacactcccagatcccaag 84854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 22932932 - 22932984
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggc 92  Q
    |||||||||||||||| | ||||| | |||||| || ||||||||||||||||    
T  22932932 ctgagaccttaaggagtaacacacactcaggtcacaggtcaataccaccaggc 22932984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 15329 - 15391
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||  ||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  15329 aacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaaccca 15391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 94977 - 95039
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| ||||||||||||||||||||| ||||| ||||||||| |||||||||||    
T  94977 aacctgagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaaccca 95039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 9165201 - 9165263
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||| || ||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  9165201 aacctgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaaccca 9165263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 16169984 - 16170046
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  16169984 aacctgaaaccttgaggaggaacacactcccaggtcccaagtcaataccaccaggctaaccca 16170046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 52116787 - 52116849
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||| || |||||||||||||||||| |||||||| |||||||||||||||||||||    
T  52116787 aacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggccaaccca 52116849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 52 - 99
Target Start/End: Complemental strand, 44126450 - 44126403
Alignment:
Q  52 ggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  44126450 ggaggagcacactcccaggtcccaggtcaataccaccaggccaaccca 44126403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 52336780 - 52336839
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaac 96  Q
    ||||||||| ||||||||||||||||||||||| ||||||| ||||||||| ||||||||    
T  52336780 aacctgagatcttaaggaggagcacactcccagatcccaagccaataccactaggccaac 52336839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 19528333 - 19528395
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||||||||||  || ||||||| |||||||||||||||||||||    
T  19528333 aacctgagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaaccca 19528395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 33700779 - 33700841
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| ||||||||||||||||||| | ||||| ||||||||| |||||||||||    
T  33700779 aacctgagaccttgaggaggagcacactcccagattccaagccaataccactaggccaaccca 33700841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 36371540 - 36371478
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| ||||||| ||||||||||||||||||||| ||||| ||||||||| |||||||||||    
T  36371540 aacctcagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaaccca 36371478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 40257465 - 40257407
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||  |||||||||||||||||||||| |||| |||||||||||||||||||||    
T  40257465 tgagacctcgaggaggagcacactcccaggtctcaagccaataccaccaggccaaccca 40257407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 51814564 - 51814502
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| ||||||||||||||| ||| || ||||||||||||| ||||||||||||    
T  51814564 aacctgagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaaccca 51814502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 31794276 - 31794332
Alignment:
Q  43 agaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||| |||||||||||||||||| |||||||| ||||||||| |||||||||||    
T  31794276 agaccttgaggaggagcacactcccaagtcccaagccaataccactaggccaaccca 31794332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 8177188 - 8177247
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaac 96  Q
    ||||||| ||||| ||||||||||||||||||| ||||||| ||||||||| ||||||||    
T  8177188 aacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactaggccaac 8177247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 88
Target Start/End: Original strand, 31383804 - 31383855
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccacc 88  Q
    |||||||||||  |||||||||||||||||||||||||||| ||||||||||    
T  31383804 aacctgagaccccaaggaggagcacactcccaggtcccaagccaataccacc 31383855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 41508898 - 41508839
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||| ||||||||||||||||||| ||||||  || ||||||||||||||||||    
T  41508898 ctgagaccttgaggaggagcacactcccagatcccaaaccagtaccaccaggccaaccca 41508839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 4566618 - 4566556
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||| | ||||||||||||||||||||| ||||| ||||| ||| |||||||||||    
T  4566618 aacctgagaccctgaggaggagcacactcccaggttccaagccaatatcactaggccaaccca 4566556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 6122864 - 6122802
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||||||||||||| |||||||| | ||||||| ||| |||||||    
T  6122864 aacctgagaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaaccca 6122802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 15581148 - 15581209
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| || ||||||||||||| |||||||||| ||| |||||||||||||||||    
T  15581148 aacctgagacctttag-aggagcacactccaaggtcccaagccaacaccaccaggccaaccca 15581209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 15786326 - 15786388
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| ||||||||||||||||||| ||||||| |||||| || || ||||||||    
T  15786326 aacctgagaccttgaggaggagcacactcccagatcccaagccaatactactagaccaaccca 15786388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 19940878 - 19940940
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||||||||||||||||||| ||| ||||||  || |||||||| ||||||||    
T  19940878 aacctgagaccttaaggaggagcacactccaaggacccaagctaacaccaccagaccaaccca 19940940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 29817745 - 29817683
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||| ||| | ||||||||||||| |||||| |||||||||| |||||||||||||||    
T  29817745 aacctgagaacttgaagaggagcacactctcaggtctcaagtcaatatcaccaggccaaccca 29817683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 36124899 - 36124853
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccac 87  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||    
T  36124899 tgagacctcaaggaggagcacactctcaggtcccaagtcaataccac 36124853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 37400340 - 37400282
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||||||||||||||  |||||| |||| |||||||||||| ||||||||    
T  37400340 tgagaccttaaggaggagcacactttcaggtctcaagccaataccaccagaccaaccca 37400282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 52029943 - 52030004
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccc 98  Q
    ||||||||||||| || ||||||||||||| ||||| |||||||||||||||  ||||||||    
T  52029943 aacctgagaccttgagaaggagcacactcctaggtctcaagtcaataccacctagccaaccc 52030004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 952582 - 952522
Alignment:
Q  36 taacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaac 96  Q
    ||||||||||| || |||| |||||||||||||||||||||| ||| |||||||| |||||    
T  952582 taacctgagactttgaggatgagcacactcccaggtcccaagccaacaccaccagaccaac 952522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 97
Target Start/End: Complemental strand, 47753784 - 47753724
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    ||||||||||||| |||||||||||| ||| || |||||||||||||| |||||| |||||    
T  47753784 aacctgagaccttgaggaggagcacagtcctagatcccaagtcaatacgaccaggtcaacc 47753724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 10526890 - 10526843
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaataccac 87  Q
    |||||||||| |||||||||| |||||||||||||||| |||||||||    
T  10526890 ctgagaccttgaggaggagcaaactcccaggtcccaagccaataccac 10526843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 44 - 99
Target Start/End: Original strand, 42983387 - 42983442
Alignment:
Q  44 gaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| |||||||| ||||||||||| || |||||||||||||||| |||||||||    
T  42983387 gacctcaaggaggaccacactcccagatctcaagtcaataccaccatgccaaccca 42983442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 1690087 - 1690141
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaa 95  Q
    |||||||| |||||||| || |||||||||||||||| |||||||||||| ||||    
T  1690087 tgagacctcaaggaggaacagactcccaggtcccaagccaataccaccagaccaa 1690141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 95
Target Start/End: Complemental strand, 2799932 - 2799874
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaa 95  Q
    ||||||||||||| ||||||||||||||||||| || |||| | ||||||| |||||||    
T  2799932 aacctgagaccttgaggaggagcacactcccagatctcaagcctataccactaggccaa 2799874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 3265994 - 3265948
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaata 83  Q
    ||||||||||||| |||||||||||||||||| || |||||||||||    
T  3265994 aacctgagaccttgaggaggagcacactcccaagttccaagtcaata 3265948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 4825041 - 4824979
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| | |||||||||||||| |||||||||| ||| |||| ||| ||||||||    
T  4825041 aacctgagaccttgaagaggagcacactccaaggtcccaagccaacaccatcagaccaaccca 4824979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 8904480 - 8904422
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||| ||||||||||||||| ||  |||||||||||||| || |||||||||||    
T  8904480 tgagaccttgaggaggagcacactcacatatcccaagtcaatactactaggccaaccca 8904422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 9117189 - 9117127
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||| ||||||||||||||| |||| ||||||| | |||||| | ||||||||||    
T  9117189 aacctgagacctcaaggaggagcacacttccagatcccaagcccataccaaccggccaaccca 9117127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 9964508 - 9964446
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||| || |||| |||||||||||||| ||||||||||||| || ||||| ||||||    
T  9964508 aacctgagacattgaggaagagcacactcccagatcccaagtcaataacatcaggctaaccca 9964446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 17745266 - 17745324
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||  ||||||||||||| | ||||||||||| ||||||||| |||||||||||    
T  17745266 tgagacctcgaggaggagcacacgctcaggtcccaagccaataccactaggccaaccca 17745324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 21547486 - 21547548
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||| ||||  ||||||||||| |||||| |||||||| ||||||||| |||||||||||    
T  21547486 aacctgaaacctcgaggaggagcaccctcccatgtcccaagccaataccactaggccaaccca 21547548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 24730454 - 24730392
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||| |||||| | ||||||||||||||||| || |||| ||||||||| |||||||||||    
T  24730454 aacctgggaccttgaagaggagcacactcccagatctcaagacaataccactaggccaaccca 24730392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 94
Target Start/End: Complemental strand, 28411397 - 28411343
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggcca 94  Q
    ||||||||| || ||||||||||||| ||  ||||||||||||||||||||||||    
T  28411397 ctgagacctcaaagaggagcacactctcatatcccaagtcaataccaccaggcca 28411343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 37047054 - 37046993
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| || ||||||||||||| |||||||||| ||| |||||||| ||||||||    
T  37047054 aacctgagaccttgag-aggagcacactccaaggtcccaagccaacaccaccagaccaaccca 37046993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 37 - 90
Target Start/End: Complemental strand, 12587340 - 12587287
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccag 90  Q
    ||||||||||||  ||||||||||||||| ||| ||||||||||||| ||||||    
T  12587340 aacctgagacctcgaggaggagcacactcacagatcccaagtcaatatcaccag 12587287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 8818143 - 8818191
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| |||||||||||||||| ||||||||||||| |||| |||||||    
T  8818143 aggagaagcacactcccaggtcacaagtcaataccatcaggtcaaccca 8818191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 21694513 - 21694454
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||   |||||||||||||||| ||| |||| ||||||||||||| |||||||    
T  21694513 aacctgagacctt---gaggagcacactcccaagtctcaagccaataccaccaggtcaaccca 21694454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 30689078 - 30689022
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    |||||||| ||||||||||| |||||||||||| ||| |||||||| |||| |||||    
T  30689078 tgagacctcaaggaggagcaaactcccaggtcctaagccaataccatcagggcaacc 30689022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 35700020 - 35699960
Alignment:
Q  39 cctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||| || || |||||||| |||| | ||||||||||||||| |||||||||||    
T  35700020 cctgagaccttgagcagaagcacacttccagtttccaagtcaataccactaggccaaccca 35699960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 31605858 - 31605913
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaac 96  Q
    ||||||||| |||||||||||||| | |||||||||| ||| |||| |||||||||    
T  31605858 tgagaccttgaggaggagcacacttcaaggtcccaagccaacaccatcaggccaac 31605913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 35187978 - 35187927
Alignment:
Q  48 ttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||| |||||||||| || || ||||||||||||||| |||||||||||    
T  35187978 ttaaggaagagcacactctcaagttccaagtcaataccactaggccaaccca 35187927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 50901648 - 50901589
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaa-taccaccaggccaaccca 99  Q
    ||||||||  |||||||||||||| |||||||||||| ||| |||||| |||||||||||    
T  50901648 tgagacctcgaggaggagcacactaccaggtcccaagccaattaccactaggccaaccca 50901589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 50920048 - 50919974
Alignment:
Q  15 tcaaattgacaccaggaagcat--aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccac 87  Q
    |||||||||||||||  || ||  ||||||| |||||||||| |||||||||| |||||  ||||||||||||||    
T  50920048 tcaaattgacaccagagagaatcgaacctgaaaccttaaggatgagcacactctcaggtttcaagtcaataccac 50919974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 1247183 - 1247121
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| |||||||| ||||||||||||  ||| ||| |||||| | |||||||||    
T  1247183 aacctgagaccttgaggaggagtacactcccaggtttcaaatcagtaccactaagccaaccca 1247121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 4280457 - 4280503
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaata 83  Q
    ||||||||||||| ||||| ||||||||| || ||||||||||||||    
T  4280457 aacctgagaccttcaggagaagcacactctcaagtcccaagtcaata 4280503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 21184398 - 21184444
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccac 87  Q
    ||||||||| || |||||||||||| ||||||||||| |||||||||    
T  21184398 tgagaccttcagaaggagcacactcgcaggtcccaagccaataccac 21184444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 25297842 - 25297780
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| ||||||  ||||||||||||||| ||| ||| ||||||||||||| || ||||||||    
T  25297842 aacctcagacctcgaggaggagcacactctcagatcctaagtcaataccactagaccaaccca 25297780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 28022145 - 28022191
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    ||||| |||||| |||||||||||||| ||||||||||||| |||||    
T  28022145 aggagaagcacaatcccaggtcccaagccaataccaccaggacaacc 28022191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 57 - 99
Target Start/End: Original strand, 38978968 - 38979010
Alignment:
Q  57 agcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||| ||||| |||||||||||||| |||||||||||    
T  38978968 agcacactcctaggtctcaagtcaataccactaggccaaccca 38979010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 99
Target Start/End: Complemental strand, 43446029 - 43445971
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||| |||||||||||||||| ||| |||||| ||| |||| || |||||||||    
T  43446029 tgagaccttgaggaggagcacactccaaggacccaagccaacaccatcaagccaaccca 43445971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 45 - 87
Target Start/End: Original strand, 44046162 - 44046204
Alignment:
Q  45 accttaaggaggagcacactcccaggtcccaagtcaataccac 87  Q
    ||||| ||||||||||||||||||| ||||||| |||||||||    
T  44046162 accttgaggaggagcacactcccagatcccaagccaataccac 44046204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 47720900 - 47720838
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||| || |||||||||||||||| |  || |||||||||||||||||  |||||||    
T  47720900 aacctgagactttgaggaggagcacactcctatatctcaagtcaataccaccagatcaaccca 47720838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 47727892 - 47727830
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||| || |||||||||||||||| |  || |||||||||||||||||  |||||||    
T  47727892 aacctgagactttgaggaggagcacactcctatatctcaagtcaataccaccagatcaaccca 47727830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 51703849 - 51703787
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||| || || ||||||||||||||||||| | ||||| ||||||||| || ||||||||    
T  51703849 aacctgaaactttgaggaggagcacactcccagattccaagccaataccactagaccaaccca 51703787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 12370229 - 12370185
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaatacca 86  Q
    ||||||||  ||||||||||||||||||||||||||| ||||||||    
T  12370229 tgagacctcgaggaggagcacactcccaggtcccaag-caatacca 12370185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 18459243 - 18459300
Alignment:
Q  43 agaccttaaggaggagcacactcccaggtcccaagtcaa-taccaccaggccaaccca 99  Q
    |||||| ||||||||||||||||||| |||||||| ||| |||||| || ||||||||    
T  18459243 agacctcaaggaggagcacactcccaagtcccaagccaattaccactagaccaaccca 18459300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 27223136 - 27223185
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaatacca 86  Q
    ||||||||||||| | || |||||||||||||| ||| ||||||||||||    
T  27223136 aacctgagaccttgaagaagagcacactcccagatcctaagtcaatacca 27223185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Complemental strand, 42787275 - 42787218
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    ||||||| || ||||||| | ||||| || |||||||||||||||||| |||||||||    
T  42787275 ctgagactttgaggaggaacgcactctcaagtcccaagtcaataccactaggccaacc 42787218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 2069711 - 2069664
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||| | |||| |||||||||||||| ||||||||||||||    
T  2069711 aggaggagcaca-tgccagatcccaagtcaatacaaccaggccaaccca 2069664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 9643818 - 9643866
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaataccacc 88  Q
    |||||||||| |||| || ||||||||||| ||||||| ||||||||||    
T  9643818 ctgagaccttgaggatgaacacactcccagatcccaagccaataccacc 9643866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 17297050 - 17297014
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaag 77  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  17297050 tgagaccttgaggaggagcacactccaaggtcccaag 17297014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 51 - 99
Target Start/End: Complemental strand, 17410287 - 17410239
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||| ||||||||||| ||||||  ||||||||| |||||||||||    
T  17410287 aggaggaccacactcccagatcccaaaccaataccactaggccaaccca 17410239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 26232398 - 26232454
Alignment:
Q  43 agaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||| ||| |||||||||||||||| || |||| ||||||||| || ||||||||    
T  26232398 agacctcaagcaggagcacactcccagatctcaagccaataccactagaccaaccca 26232454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 45235399 - 45235447
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||||||| |||||||  |||||||| ||| ||||||||    
T  45235399 aggaggagcacactcccaagtcccaaaccaataccatcagaccaaccca 45235447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 53 - 97
Target Start/End: Original strand, 51013148 - 51013192
Alignment:
Q  53 gaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    ||||| |||||||||| |||||||| || ||||||||||||||||    
T  51013148 gaggatcacactcccatgtcccaagccagtaccaccaggccaacc 51013192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 11598 - 11536
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||  ||||||||||||||||||| ||||||| |||||||||||||||| ||||    
T  11598 aacctgagacctcgaggaggagcacactcccagatcccaagccaataccaccaggccatccca 11536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 13052 - 13112
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaacc 97  Q
    ||||||||||||| ||||||||||||||||||| || |||| ||||||||||| |||||||    
T  13052 aacctgagaccttgaggaggagcacactcccagatctcaagccaataccaccaagccaacc 13112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 24849 - 24908
Alignment:
Q  40 ctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||| |||||||||| ||||| ||| |||||||||| |||||||||||||||||    
T  24849 ctgagaccttgaggaggagcaaactccaaggccccaagtcaacaccaccaggccaaccca 24908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 19968 - 20027
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaac 96  Q
    ||||||||||||| |||||||||| |||||||||| ||||| ||||||||| ||||||||    
T  19968 aacctgagaccttgaggaggagcatactcccaggttccaagccaataccactaggccaac 20027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 7736 - 7794
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||||||||||||||  |||||| |||| |||||||||||| ||||||||    
T  7736 tgagaccttaaggaggagcacactttcaggtctcaagccaataccaccagaccaaccca 7794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 6925 - 6987
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||| || |||||||||||||||||  |||||||| ||||||||| |||||||||||    
T  6925 aacctgagactttgaggaggagcacactccccagtcccaagccaataccactaggccaaccca 6987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 43342 - 43400
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||| |||| |||||||||| |||||||| ||||||||||| |||||||||    
T  43342 tgagaccttaagaaggaacacactcccaagtcccaagccaataccaccatgccaaccca 43400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 846 - 908
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||| |  |||||||||||| |||||| ||||||| |||||||||||||||| ||||    
T  846 aacctgagacttcgaggaggagcacattcccagatcccaagccaataccaccaggccacccca 908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 2476 - 2538
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||| ||||||||||||||||||| ||| ||  |||||||||| | ||||||||    
T  2476 aacctgagaccttgaggaggagcacactcccagatccaaaaccaataccaccggaccaaccca 2538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 42526 - 42588
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||  | |||||||||| |||||||| | ||||||||||||||| |||||||||||    
T  42526 aacctgagactctgaggaggagcatactcccagattccaagtcaataccactaggccaaccca 42588  T

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Target: scaffold0070; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 38912 - 38970
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| ||||| || ||||| ||||| |||||||||| |||||||||||| ||||||||    
T  38912 tgagatcttaaagatgagcatactcctaggtcccaagccaataccaccagaccaaccca 38970  T

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Target: scaffold0337 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 1817 - 1761
Alignment:
Q  43 agaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||| |||||||||| ||||| |||||||||| ||| ||||| |||||||||||    
T  1817 agaccttgaggaggagcaaactccaaggtcccaagccaacaccactaggccaaccca 1761  T

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Target: scaffold0065 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 12253 - 12197
Alignment:
Q  43 agaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||| |||||||||| ||||| |||||||||| ||| ||||| |||||||||||    
T  12253 agaccttgaggaggagcaaactccaaggtcccaagccaacaccactaggccaaccca 12197  T

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Target: scaffold0172 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 15787 - 15842
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaac 96  Q
    ||||||||| |||||||||| ||||| |  ||||||| ||||||||||||||||||    
T  15787 tgagaccttgaggaggagcatactccaaaatcccaagccaataccaccaggccaac 15842  T

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Target: scaffold0221 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 99
Target Start/End: Original strand, 2919 - 2977
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||||||| |||||| | |||||||||  ||| ||||||| |||||||||    
T  2919 tgagaccttaaggaggatcacacttcaaggtcccaaaccaaaaccaccaagccaaccca 2977  T

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Target: scaffold0211 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 24107 - 24061
Alignment:
Q  53 gaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    |||||||||||||| | |||||||||||||||||  |||||||||||    
T  24107 gaggagcacactcctaagtcccaagtcaataccattaggccaaccca 24061  T

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Target: scaffold0126 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 25353 - 25403
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccac 87  Q
    ||||||||||||| || ||||||||||||||| ||| |||| |||||||||    
T  25353 aacctgagaccttgagaaggagcacactcccaagtctcaagccaataccac 25403  T

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Target: scaffold0118 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 41639 - 41701
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||  |||||||||| |||| ||| || |||| ||||||||| |||||||||||    
T  41639 aacctgagacctcgaggaggagcatactctcagatctcaagccaataccactaggccaaccca 41701  T

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Target: scaffold0032 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 112352 - 112290
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| |||||| || ||||| ||||||||||| | ||||| |||||| ||||||||||||||    
T  112352 aacctcagacctcaaagaggaccacactcccagattccaagccaatacaaccaggccaaccca 112290  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 41 - 95
Target Start/End: Original strand, 19857 - 19911
Alignment:
Q  41 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaa 95  Q
    |||||||| ||||||||||| |||||||| ||||||| |||||||| || |||||    
T  19857 tgagacctcaaggaggagcagactcccagatcccaagccaataccatcatgccaa 19911  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 99
Target Start/End: Original strand, 163015 - 163077
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||| |||||||| |||||||||||||| ||||||  ||||||| ||||| || ||||||||    
T  163015 aacctcagaccttatggaggagcacactctcaggtcataagtcaaaaccactagaccaaccca 163077  T

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Target: scaffold0056 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 61659 - 61704
Alignment:
Q  42 gagaccttaaggaggagcacactcccaggtcccaagtcaataccac 87  Q
    ||||| |||||||||| || |||||||||||||||| |||||||||    
T  61659 gagactttaaggaggaccatactcccaggtcccaagccaataccac 61704  T

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Target: scaffold0044 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 93017 - 92968
Alignment:
Q  37 aacctgagaccttaaggaggagcacactcccaggtcccaagtcaatacca 86  Q
    ||||| |||||| |||||||| ||||||||||| | ||||||||||||||    
T  93017 aacctcagacctcaaggaggatcacactcccagattccaagtcaatacca 92968  T

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Target: scaffold0187 (Bit Score: 29; Significance: 0.0000008; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 12442 - 12490
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||| ||||||  |||||  ||||||||||||||||||||||||||    
T  12442 aggaggatcacactttcaggtttcaagtcaataccaccaggccaaccca 12490  T

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Target: scaffold0187; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 22770 - 22818
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||| ||||||  |||||  ||||||||||||||||||||||||||    
T  22770 aggaggatcacactttcaggtttcaagtcaataccaccaggccaaccca 22818  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 51 - 99
Target Start/End: Original strand, 157007 - 157055
Alignment:
Q  51 aggaggagcacactcccaggtcccaagtcaataccaccaggccaaccca 99  Q
    ||||||||||||||||||| || |||| |||||||| |||| |||||||    
T  157007 aggaggagcacactcccagatctcaagccaataccaacaggtcaaccca 157055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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