View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8952_low_20 (Length: 478)

Name: NF8952_low_20
Description: NF8952
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8952_low_20
NF8952_low_20
[»] chr3 (26 HSPs)
chr3 (13-460)||(11145646-11146096)
chr3 (13-287)||(8864214-8864488)
chr3 (13-287)||(10892234-10892508)
chr3 (13-287)||(11127896-11128170)
chr3 (13-287)||(11156887-11157161)
chr3 (321-461)||(11128135-11128275)
chr3 (321-461)||(10892129-10892269)
chr3 (321-460)||(8864110-8864249)
chr3 (338-460)||(11157143-11157265)
chr3 (46-146)||(11153254-11153353)
chr3 (165-259)||(11242535-11242629)
chr3 (349-403)||(9841727-9841781)
chr3 (349-403)||(10360947-10361001)
chr3 (349-403)||(10372988-10373042)
chr3 (349-404)||(10583381-10583436)
chr3 (349-403)||(9980335-9980389)
chr3 (349-403)||(10263570-10263624)
chr3 (349-403)||(10431187-10431241)
chr3 (349-403)||(11779128-11779182)
chr3 (241-287)||(13173947-13173993)
chr3 (349-402)||(9852609-9852662)
chr3 (349-378)||(10034897-10034926)
chr3 (349-378)||(10091682-10091711)
chr3 (349-378)||(10198564-10198593)
chr3 (349-378)||(11772128-11772157)
chr3 (211-267)||(10372919-10372975)
[»] scaffold0083 (1 HSPs)
scaffold0083 (349-403)||(54748-54802)
[»] scaffold0002 (1 HSPs)
scaffold0002 (241-287)||(132995-133041)


Alignment Details
Target: chr3 (Bit Score: 349; Significance: 0; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 13 - 460
Target Start/End: Original strand, 11145646 - 11146096
Alignment:
Q  13 attattcttgactagtaacgtaaaagaaattcatacctgaaacaagatgg---cacgcctccttccattcccattattcatattgtcactttgccattta 109  Q
    |||||||| |||||||||||||||||||||||||||||||||||||  ||   ||| ||||||||||||||||||||||||||| |||||||||||||||    
T  11145646 attattctcgactagtaacgtaaaagaaattcatacctgaaacaaggaggaggcacacctccttccattcccattattcatattatcactttgccattta 11145745  T
Q  110 tttctatcacagggatataagaaatttcagaccaattcctgcctccctcactttcatacctttcttctaaaacagggcattcagaaatgctcagtaactt 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11145746 tttctatcacagggatataagaaatttcagaccaattcctgcctccctcactttcatacctttcttctaaaacagggcatttagaaatgctcagtaactt 11145845  T
Q  210 tagagaggaagggagactgtgttctggaaatgactcaagcctttgacagttataaaaagaaagtgtttcgagagaggaaggtaacatgacctctgccaag 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||    
T  11145846 tagagaggaagggagactgtgttctggaaatgactcaagcctttgacatttgtaaaaagaaagtgttttgagagaggaaggtaacatgacctctgccaag 11145945  T
Q  310 gactcaagttgttgacattcgtaaaaagaaagtgtttccagagaggagaggtgtcgaagcccatttccacctaagcatttcacttcagagagattactta 409  Q
    ||||||||||||||||| |  ||||||  ||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11145946 gactcaagttgttgacagttataaaaattaagtgtttcaagagcggagagttgtcgaagcccatttccacctaagcatttcacttcagagagattactta 11146045  T
Q  410 ttgacagaaacattaaggaaacaggcagcaattgctccttcaacaaggtgt 460  Q
    ||||||||||||  |||||||  || |||||||||||||||||||||||||    
T  11146046 ttgacagaaacaccaaggaaatgggtagcaattgctccttcaacaaggtgt 11146096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 13 - 287
Target Start/End: Complemental strand, 8864488 - 8864214
Alignment:
Q  13 attattcttgactagtaacgtaaaagaaattcatacctgaaacaagatggcacgcctccttccattcccattattcatattgtcactttgccatttattt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  8864488 attattcttgactagtaacgtaaaagaaattcatacctgaaacaagatggcacacctccttccattcccattattcatattgtcattttgccatttattt 8864389  T
Q  113 ctatcacagggatataagaaatttcagaccaattcctgcctccctcactttcatacctttcttctaaaacagggcattcagaaatgctcagtaactttag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  | |||| ||||||||||||||    
T  8864388 ctatcacagggatataagaaatttcagaccaattcctgcctccctcactttcatacctttcttctaaaatagggcatctataaattctcagtaactttag 8864289  T
Q  213 agaggaagggagactgtgttctggaaatgactcaagcctttgacagttataaaaagaaagtgtttcgagagagga 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||| ||||||||    
T  8864288 agaggaagggagactgtgttctggaaatgactcaagcctttgacagtcgtgaaaagaaagtgtttccagagagga 8864214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 13 - 287
Target Start/End: Complemental strand, 10892508 - 10892234
Alignment:
Q  13 attattcttgactagtaacgtaaaagaaattcatacctgaaacaagatggcacgcctccttccattcccattattcatattgtcactttgccatttattt 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10892508 attattcttgactagtaacgtaaaagaaattcatacctgaaacaagatggcacgcctccttccattcccattattcatattgtcactttgtcatttattt 10892409  T
Q  113 ctatcacagggatataagaaatttcagaccaattcctgcctccctcactttcatacctttcttctaaaacagggcattcagaaatgctcagtaactttag 212  Q
      ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  10892408 taatcacagggatatgagaaatttcggaccaattcctgcctccctcactttcatacctttcttctaaaacagggcatttagaaatgctcagtatctttag 10892309  T
Q  213 agaggaagggagactgtgttctggaaatgactcaagcctttgacagttataaaaagaaagtgtttcgagagagga 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||| ||||||||    
T  10892308 agaggaagggagactgtgttctggaaatgactcaagcctttgacatttgtgaaaagaaagtgtttccagagagga 10892234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 13 - 287
Target Start/End: Original strand, 11127896 - 11128170
Alignment:
Q  13 attattcttgactagtaacgtaaaagaaattcatacctgaaacaagatggcacgcctccttccattcccattattcatattgtcactttgccatttattt 112  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  11127896 attattcttgactagtagcataaaagaaattcatacctgaaacaagatggcacgcctccatccattcccattattcatattgtcactttgccatttattt 11127995  T
Q  113 ctatcacagggatataagaaatttcagaccaattcctgcctccctcactttcatacctttcttctaaaacagggcattcagaaatgctcagtaactttag 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||  ||||||||||||    
T  11127996 ctatcacagggatataagaaatttcagaccaattcctgcctccctcactttcatacctttcttctaaaacagggcaattagaaatgtgcagtaactttag 11128095  T
Q  213 agaggaagggagactgtgttctggaaatgactcaagcctttgacagttataaaaagaaagtgtttcgagagagga 287  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||| ||||||||    
T  11128096 agaggaagggagactgtgttctggaaatgactcaatcctttgacagtcgtaaaaagaaagtgtttcaagagagga 11128170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 13 - 287
Target Start/End: Original strand, 11156887 - 11157161
Alignment:
Q  13 attattcttgactagtaacgtaaaagaaattcatacctgaaacaagatggcacgcctccttccattcccattattcatattgtcactttgccatttattt 112  Q
    |||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11156887 attattctcgactagtaacataaaagaaattcatacctgaaacaaggtggcacgcctccttccattcccattattcatattgtcactttgtcatttattt 11156986  T
Q  113 ctatcacagggatataagaaatttcagaccaattcctgcctccctcactttcatacctttcttctaaaacagggcattcagaaatgctcagtaactttag 212  Q
     |||||||||||||| ||||||||| ||||||||||  |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  11156987 ttatcacagggatatgagaaatttcggaccaattcccccctctctcactttcatacctttcttctaaaacagggcatttagaaatgctcagtaactttag 11157086  T
Q  213 agaggaagggagactgtgttctggaaatgactcaagcctttgacagttataaaaagaaagtgtttcgagagagga 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||  |||||||||| ||||||||    
T  11157087 agaggaagggagactgtgttctggaaatgactcaagcctttgacatttcgaaaactaaagtgtttccagagagga 11157161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 321 - 461
Target Start/End: Original strand, 11128135 - 11128275
Alignment:
Q  321 ttgacattcgtaaaaagaaagtgtttccagagaggagaggtgtcgaagcccatttccacctaagcatttcacttcagagagattacttattgacagaaac 420  Q
    |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11128135 ttgacagtcgtaaaaagaaagtgtttcaagagaggagaggtgtcgaagcccatttccacctaagcatttcacttcagagagattacttattgacagaaac 11128234  T
Q  421 attaaggaaacaggcagcaattgctccttcaacaaggtgtt 461  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  11128235 attaaggaaacaggcagcaattgctccttcaacaaggtgtt 11128275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 321 - 461
Target Start/End: Complemental strand, 10892269 - 10892129
Alignment:
Q  321 ttgacattcgtaaaaagaaagtgtttccagagaggagaggtgtcgaagcccatttccacctaagcatttcacttcagagagattacttattgacagaaac 420  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10892269 ttgacatttgtgaaaagaaagtgtttccagagaggagaggtgtcgaagcccatttccacctaagcatttcatttcagagagattacttattgacagaaac 10892170  T
Q  421 attaaggaaacaggcagcaattgctccttcaacaaggtgtt 461  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  10892169 attaaggaaacaggcagcaattgctccttcaacaaggtgtt 10892129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 321 - 460
Target Start/End: Complemental strand, 8864249 - 8864110
Alignment:
Q  321 ttgacattcgtaaaaagaaagtgtttccagagaggagaggtgtcgaagcccatttccacctaagcatttcacttcagagagattacttattgacagaaac 420  Q
    |||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  8864249 ttgacagtcgtgaaaagaaagtgtttccagagaggagaggtatcgaagcccatttccatctaagcatttcgcttcagagagattacttattgacagaaac 8864150  T
Q  421 attaaggaaacaggcagcaattgctccttcaacaaggtgt 460  Q
    |  |||||||  || |||||||||||||||||||||||||    
T  8864149 accaaggaaatgggtagcaattgctccttcaacaaggtgt 8864110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 338 - 460
Target Start/End: Original strand, 11157143 - 11157265
Alignment:
Q  338 aaagtgtttccagagaggagaggtgtcgaagcccatttccacctaagcatttcacttcagagagattacttattgacagaaacattaaggaaacaggcag 437  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||   || ||    
T  11157143 aaagtgtttccagagaggagaggtgtcgaagcccatttccacctaagcatttcacttcagagagtttacttattgacagaaacaccaaggaagtgggaag 11157242  T
Q  438 caattgctccttcaacaaggtgt 460  Q
    |||||||||||||||||||||||    
T  11157243 caattgctccttcaacaaggtgt 11157265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 46 - 146
Target Start/End: Original strand, 11153254 - 11153353
Alignment:
Q  46 tacctgaaacaagatggcacgcctccttccattcccattattcatattgtcactttgccatttatttctatcacagggatataagaaatttcagaccaat 145  Q
    ||||||||||||| ||||| |||||||||| || | || | ||||||| |||| |||| |||||||| |||||||||||||| || ||||| ||||||||    
T  11153254 tacctgaaacaaggtggcaagcctccttccgtttc-atgactcatattatcacgttgcgatttatttttatcacagggatatgagcaattttagaccaat 11153352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 165 - 259
Target Start/End: Original strand, 11242535 - 11242629
Alignment:
Q  165 atacctttcttctaaaacagggcattcagaaatgctcagtaactttagagaggaagggagactgtgttctggaaatgactcaagcctttgacagt 259  Q
    ||||||||||||||| |||||||||||   ||||||||||| ||| ||||||||||| | | ||| |||||| ||||||| ||| ||| ||||||    
T  11242535 atacctttcttctaacacagggcattccttaatgctcagtaccttaagagaggaaggaaaagtgtcttctggcaatgactgaagtcttcgacagt 11242629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 403
Target Start/End: Complemental strand, 9841781 - 9841727
Alignment:
Q  349 agagaggagaggtgtcgaagcccatttccacctaagcatttcacttcagagagat 403  Q
    |||||||||||||||||||||||||||||| | ||| | |||| |||||||||||    
T  9841781 agagaggagaggtgtcgaagcccatttccatcaaaggacttcatttcagagagat 9841727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 403
Target Start/End: Original strand, 10360947 - 10361001
Alignment:
Q  349 agagaggagaggtgtcgaagcccatttccacctaagcatttcacttcagagagat 403  Q
    |||||||||||||||||||||||||||||| | ||| | |||| |||||||||||    
T  10360947 agagaggagaggtgtcgaagcccatttccatcaaaggacttcatttcagagagat 10361001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 403
Target Start/End: Original strand, 10372988 - 10373042
Alignment:
Q  349 agagaggagaggtgtcgaagcccatttccacctaagcatttcacttcagagagat 403  Q
    |||||||||||||||||||||||||||||| | ||| | |||| |||||||||||    
T  10372988 agagaggagaggtgtcgaagcccatttccatcaaaggacttcatttcagagagat 10373042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 404
Target Start/End: Complemental strand, 10583436 - 10583381
Alignment:
Q  349 agagaggagaggtgtcgaagcccatttccacctaagcatttcacttcagagagatt 404  Q
    ||||||||||||||||| |||||||||||| | ||| | |||| ||||||||||||    
T  10583436 agagaggagaggtgtcgcagcccatttccatcaaaggacttcatttcagagagatt 10583381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 403
Target Start/End: Complemental strand, 9980389 - 9980335
Alignment:
Q  349 agagaggagaggtgtcgaagcccatttccacctaagcatttcacttcagagagat 403  Q
    ||||||||||||||||| |||||||||||| | ||| | |||| |||||||||||    
T  9980389 agagaggagaggtgtcgcagcccatttccatcaaaggacttcatttcagagagat 9980335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 403
Target Start/End: Complemental strand, 10263624 - 10263570
Alignment:
Q  349 agagaggagaggtgtcgaagcccatttccacctaagcatttcacttcagagagat 403  Q
    ||||||||||||||| |||||||||||||| | ||| | |||| |||||||||||    
T  10263624 agagaggagaggtgttgaagcccatttccatcaaaggacttcatttcagagagat 10263570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 403
Target Start/End: Original strand, 10431187 - 10431241
Alignment:
Q  349 agagaggagaggtgtcgaagcccatttccacctaagcatttcacttcagagagat 403  Q
    ||||||||||||||||| |||||||||||| | ||| | |||| |||||||||||    
T  10431187 agagaggagaggtgtcgcagcccatttccatcaaaggacttcatttcagagagat 10431241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 403
Target Start/End: Original strand, 11779128 - 11779182
Alignment:
Q  349 agagaggagaggtgtcgaagcccatttccacctaagcatttcacttcagagagat 403  Q
    |||||||||||||||||||||||||||||| | ||| | |||| |||| ||||||    
T  11779128 agagaggagaggtgtcgaagcccatttccatcgaaggacttcatttcatagagat 11779182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 13173993 - 13173947
Alignment:
Q  241 gactcaagcctttgacagttataaaaagaaagtgtttcgagagagga 287  Q
    |||||||||||| |||| ||||||||| |||||||||| ||||||||    
T  13173993 gactcaagccttggacaattataaaaacaaagtgtttcaagagagga 13173947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 402
Target Start/End: Complemental strand, 9852662 - 9852609
Alignment:
Q  349 agagaggagaggtgtcgaagcccatttccacctaagcatttcacttcagagaga 402  Q
    |||||| ||||||||||||||||||||||| | ||| | |||| ||||||||||    
T  9852662 agagagaagaggtgtcgaagcccatttccatcaaaggacttcatttcagagaga 9852609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 378
Target Start/End: Complemental strand, 10034926 - 10034897
Alignment:
Q  349 agagaggagaggtgtcgaagcccatttcca 378  Q
    ||||||||||||||||||||||||||||||    
T  10034926 agagaggagaggtgtcgaagcccatttcca 10034897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 378
Target Start/End: Complemental strand, 10091711 - 10091682
Alignment:
Q  349 agagaggagaggtgtcgaagcccatttcca 378  Q
    ||||||||||||||||||||||||||||||    
T  10091711 agagaggagaggtgtcgaagcccatttcca 10091682  T

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Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 378
Target Start/End: Complemental strand, 10198593 - 10198564
Alignment:
Q  349 agagaggagaggtgtcgaagcccatttcca 378  Q
    ||||||||||||||||||||||||||||||    
T  10198593 agagaggagaggtgtcgaagcccatttcca 10198564  T

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Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 378
Target Start/End: Complemental strand, 11772157 - 11772128
Alignment:
Q  349 agagaggagaggtgtcgaagcccatttcca 378  Q
    ||||||||||||||||||||||||||||||    
T  11772157 agagaggagaggtgtcgaagcccatttcca 11772128  T

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Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 211 - 267
Target Start/End: Original strand, 10372919 - 10372975
Alignment:
Q  211 agagaggaagggagactgtgttctggaaatgactcaagcctttgacagttataaaaa 267  Q
    |||||||||||||| |||| |||||| |||||||||||| ||| ||| ||| |||||    
T  10372919 agagaggaagggaggctgtcttctggtaatgactcaagcttttcacaattaaaaaaa 10372975  T

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Target: scaffold0083 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 403
Target Start/End: Original strand, 54748 - 54802
Alignment:
Q  349 agagaggagaggtgtcgaagcccatttccacctaagcatttcacttcagagagat 403  Q
    ||||||||||||||||| |||||||||||| | ||| | |||| |||||||||||    
T  54748 agagaggagaggtgtcgcagcccatttccatcaaaggacttcatttcagagagat 54802  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 241 - 287
Target Start/End: Original strand, 132995 - 133041
Alignment:
Q  241 gactcaagcctttgacagttataaaaagaaagtgtttcgagagagga 287  Q
    |||||||||||| |||| ||||||||| |||||||||| ||||||||    
T  132995 gactcaagccttggacaattataaaaacaaagtgtttcaagagagga 133041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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