View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8955_low_15 (Length: 290)
Name: NF8955_low_15
Description: NF8955
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8955_low_15 |
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Alignment Details
Target: chr1 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 18 - 278
Target Start/End: Complemental strand, 3757006 - 3756746
Alignment:
| Q |
18 |
cattataaccatagcaattgcttgttacttgattaatttcataagttaacgatgtatcgatctattaatgcatatggaaagcaaagtccatcatgaagca |
117 |
Q |
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| T |
3757006 |
cattataaccatagcaattgcttgttacttgattaatttcataagttaacgatgtatcgatctattaatgcatatggaaagcaaagtccatcatgaagca |
3756907 |
T |
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| Q |
118 |
tattgacaatgatatattggacttacactaagatccattaaaccccaccatggccattatatctatgaaaatcaaggatttgcccccaaaacacttgtca |
217 |
Q |
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| T |
3756906 |
tattgacaatgatatattggacttacactaagatccattaaaccccaccatggccattatatctatgaaaatcaaggatttgcccccaaaacacttgtca |
3756807 |
T |
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| Q |
218 |
tggccacatgcttcaaatatttggtttcctcaatgttgattaattacaagacattaagtat |
278 |
Q |
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| T |
3756806 |
tggccacatgcttcaaatatttggtttccttaatgttgattaattacaagacattaagtat |
3756746 |
T |
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