View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8955_low_33 (Length: 208)
Name: NF8955_low_33
Description: NF8955
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8955_low_33 |
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Alignment Details
Target: chr8 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 71 - 194
Target Start/End: Complemental strand, 23414469 - 23414346
Alignment:
| Q |
71 |
gttctttaaccattgcaataaaattattatcattatcatgtgagggcatgtgtgtttccagtagtcctacaaaaatgaagttctttttatgtaattcaat |
170 |
Q |
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| T |
23414469 |
gttctttaaccattgcaataaaattattatcattatcatgtgagggcatgtgtgtttccagtagtcctacaaaaatgaagttctttttatgtaattcaat |
23414370 |
T |
|
| Q |
171 |
tttacgatatatagacagaataat |
194 |
Q |
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|||||||||||||||||||||||| |
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| T |
23414369 |
tttacgatatatagacagaataat |
23414346 |
T |
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