View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8956_low_13 (Length: 224)
Name: NF8956_low_13
Description: NF8956
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8956_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 44431817 - 44432008
Alignment:
| Q |
18 |
accattactgtaaccgtcatcggaagccattccatcttcatcttcttcctccaaagcataaatgcaatccctaacactgagtctactctgttcctccgct |
117 |
Q |
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| T |
44431817 |
accattactgtaaccgtcatcggaagccattccatcttcatcttcttcctccaaagcataaatgcaatccctaacactgagtctactctgttcctccgct |
44431916 |
T |
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| Q |
118 |
tgacgctgtttgattctaagatcctcttctctctgtctcgctgatgaagcttgaccaatcgctaattgacctaaattgcgacttacaacacg |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44431917 |
tgacgctgtttgattctaagatcctcttctctctgtctcgctgatgaagcttgaccaatcgctaattgacctaaattgcgacttacaacacg |
44432008 |
T |
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