View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8957_high_3 (Length: 889)

Name: NF8957_high_3
Description: NF8957
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8957_high_3
NF8957_high_3
[»] chr5 (64 HSPs)
chr5 (3-660)||(38433757-38434426)
chr5 (139-539)||(12680548-12680948)
chr5 (148-509)||(2226386-2226747)
chr5 (139-470)||(9161192-9161521)
chr5 (139-461)||(36103162-36103484)
chr5 (139-542)||(332761-333156)
chr5 (149-540)||(32520697-32521083)
chr5 (139-484)||(30265326-30265667)
chr5 (182-488)||(12165467-12165773)
chr5 (139-509)||(36176623-36176973)
chr5 (142-540)||(10174285-10174665)
chr5 (285-539)||(36176362-36176616)
chr5 (118-302)||(38334674-38334860)
chr5 (139-374)||(17084513-17084748)
chr5 (139-488)||(23780943-23781263)
chr5 (139-488)||(23867896-23868216)
chr5 (3-315)||(9988586-9988878)
chr5 (730-874)||(38434496-38434632)
chr5 (182-348)||(35893238-35893405)
chr5 (139-360)||(42544863-42545086)
chr5 (352-539)||(15068825-15069012)
chr5 (370-507)||(42545822-42545959)
chr5 (352-488)||(11917804-11917940)
chr5 (3-112)||(42544713-42544821)
chr5 (352-475)||(666869-666992)
chr5 (3-114)||(2226796-2226907)
chr5 (352-475)||(27885684-27885807)
chr5 (352-483)||(38334344-38334475)
chr5 (352-475)||(701566-701689)
chr5 (352-475)||(8409335-8409458)
chr5 (3-114)||(9161043-9161152)
chr5 (352-475)||(30002347-30002470)
chr5 (3-114)||(12680988-12681097)
chr5 (3-114)||(36177013-36177123)
chr5 (3-114)||(32521133-32521245)
chr5 (4-114)||(30265707-30265818)
chr5 (3-111)||(36103527-36103634)
chr5 (3-111)||(12166084-12166192)
chr5 (371-535)||(35359464-35359623)
chr5 (351-540)||(35893443-35893626)
chr5 (3-111)||(333199-333305)
chr5 (3-114)||(35358996-35359106)
chr5 (156-215)||(35893188-35893247)
chr5 (139-188)||(12165992-12166041)
chr5 (3-111)||(10174140-10174239)
chr5 (357-416)||(691167-691226)
chr5 (366-540)||(2423279-2423453)
chr5 (3-57)||(8409055-8409109)
chr5 (3-57)||(11917470-11917524)
chr5 (3-57)||(15068525-15068579)
chr5 (3-57)||(27886390-27886444)
chr5 (321-379)||(9988538-9988593)
chr5 (3-47)||(27572019-27572063)
chr5 (3-47)||(36567776-36567820)
chr5 (3-47)||(41454928-41454972)
chr5 (3-46)||(7591540-7591583)
chr5 (428-539)||(9988409-9988520)
chr5 (8-47)||(20191958-20191997)
chr5 (3-46)||(30002066-30002109)
chr5 (3-33)||(667612-667642)
chr5 (3-57)||(701285-701339)
chr5 (357-411)||(18432556-18432610)
chr5 (357-471)||(23623469-23623583)
chr5 (355-385)||(27571668-27571698)
[»] chr6 (25 HSPs)
chr6 (139-539)||(35039411-35039811)
chr6 (139-540)||(13801454-13801850)
chr6 (139-436)||(33550533-33550830)
chr6 (143-513)||(25137358-25137727)
chr6 (142-441)||(15859941-15860239)
chr6 (139-441)||(10591059-10591350)
chr6 (139-488)||(10390564-10390899)
chr6 (352-475)||(5866619-5866742)
chr6 (352-475)||(12270905-12271028)
chr6 (7-113)||(35040135-35040239)
chr6 (6-114)||(15859791-15859898)
chr6 (3-112)||(13801892-13802000)
chr6 (324-470)||(10493933-10494079)
chr6 (3-114)||(33550384-33550493)
chr6 (3-114)||(10494288-10494399)
chr6 (5-111)||(10590907-10591016)
chr6 (3-111)||(5287824-5287932)
chr6 (3-111)||(10390942-10391049)
chr6 (3-114)||(25136831-25136941)
chr6 (3-47)||(13810843-13810887)
chr6 (3-57)||(5874116-5874170)
chr6 (3-57)||(12270611-12270665)
chr6 (3-47)||(31945408-31945452)
chr6 (1-47)||(22413900-22413946)
chr6 (3-37)||(28610677-28610711)
[»] chr3 (36 HSPs)
chr3 (139-470)||(6003935-6004266)
chr3 (139-484)||(35531690-35532030)
chr3 (139-462)||(21586402-21586719)
chr3 (139-370)||(50562223-50562454)
chr3 (139-441)||(32880506-32880813)
chr3 (140-381)||(33002728-33002969)
chr3 (139-309)||(27641871-27642041)
chr3 (149-441)||(43030647-43030919)
chr3 (139-369)||(39098148-39098378)
chr3 (317-470)||(48032683-48032836)
chr3 (352-483)||(10369610-10369741)
chr3 (3-113)||(6004307-6004415)
chr3 (352-475)||(35401771-35401894)
chr3 (352-539)||(51149205-51149392)
chr3 (2-114)||(32880354-32880466)
chr3 (352-539)||(33361312-33361499)
chr3 (352-470)||(4669199-4669317)
chr3 (352-441)||(34794923-34795012)
chr3 (8-106)||(50562496-50562593)
chr3 (3-114)||(21586759-21586871)
chr3 (366-509)||(27641725-27641868)
chr3 (7-111)||(35532073-35532175)
chr3 (3-111)||(43030486-43030592)
chr3 (361-509)||(10481078-10481226)
chr3 (3-114)||(9827698-9827806)
chr3 (3-91)||(34794649-34794737)
chr3 (3-42)||(48032838-48032877)
chr3 (3-57)||(4669611-4669665)
chr3 (3-57)||(10369276-10369330)
chr3 (3-57)||(33361018-33361072)
chr3 (3-57)||(35402174-35402228)
chr3 (3-57)||(51149631-51149685)
chr3 (3-47)||(8557932-8557976)
chr3 (3-47)||(51191764-51191808)
chr3 (335-406)||(55130150-55130221)
chr3 (3-33)||(20038444-20038474)
[»] chr8 (32 HSPs)
chr8 (139-509)||(30392290-30392659)
chr8 (139-540)||(14549437-14549834)
chr8 (139-470)||(36827334-36827665)
chr8 (139-488)||(3682129-3682472)
chr8 (139-440)||(10661358-10661658)
chr8 (139-539)||(18169505-18169899)
chr8 (139-539)||(18633071-18633465)
chr8 (139-463)||(33068807-33069121)
chr8 (143-450)||(36909910-36910201)
chr8 (314-470)||(44673109-44673265)
chr8 (273-493)||(6200455-6200675)
chr8 (3-231)||(44672843-44673073)
chr8 (3-114)||(14549288-14549397)
chr8 (3-114)||(10661208-10661318)
chr8 (3-111)||(18169939-18170048)
chr8 (3-111)||(36910252-36910359)
chr8 (3-114)||(6200760-6200870)
chr8 (366-463)||(5802505-5802602)
chr8 (9-111)||(18633505-18633609)
chr8 (15-112)||(30392152-30392248)
chr8 (361-463)||(3006186-3006283)
chr8 (3-112)||(3681982-3682087)
chr8 (366-450)||(42496462-42496546)
chr8 (66-114)||(36827705-36827753)
chr8 (149-188)||(6200670-6200709)
chr8 (3-57)||(3006536-3006590)
chr8 (3-57)||(5803210-5803264)
chr8 (66-107)||(33068379-33068420)
chr8 (3-47)||(9012816-9012860)
chr8 (361-404)||(19539686-19539729)
chr8 (5-47)||(40436498-40436540)
chr8 (5-42)||(38926415-38926452)
[»] chr4 (50 HSPs)
chr4 (142-540)||(48996292-48996690)
chr4 (139-470)||(40899626-40899957)
chr4 (139-540)||(32136902-32137306)
chr4 (139-539)||(30193453-30193853)
chr4 (141-488)||(8176136-8176473)
chr4 (142-440)||(6333529-6333832)
chr4 (139-441)||(40806396-40806690)
chr4 (139-539)||(10218893-10219283)
chr4 (118-539)||(31301586-31301999)
chr4 (141-404)||(23937130-23937393)
chr4 (153-438)||(52344932-52345216)
chr4 (153-392)||(43630775-43630996)
chr4 (336-475)||(26477730-26477869)
chr4 (198-302)||(29639724-29639828)
chr4 (352-544)||(50570490-50570682)
chr4 (3-113)||(40899998-40900106)
chr4 (352-540)||(29639994-29640182)
chr4 (352-539)||(42558082-42558269)
chr4 (3-114)||(10218743-10218853)
chr4 (3-114)||(30193893-30194003)
chr4 (351-488)||(5261379-5261516)
chr4 (3-114)||(6333376-6333486)
chr4 (3-114)||(23937435-23937546)
chr4 (3-114)||(40806730-40806841)
chr4 (3-114)||(32136752-32136862)
chr4 (352-470)||(36078683-36078801)
chr4 (352-475)||(29643308-29643431)
chr4 (3-114)||(48996139-48996249)
chr4 (4-114)||(8176515-8176624)
chr4 (3-105)||(52344787-52344888)
chr4 (294-441)||(52345216-52345353)
chr4 (3-114)||(43630632-43630742)
chr4 (3-114)||(51394773-51394883)
chr4 (361-540)||(1564490-1564669)
chr4 (3-110)||(5261887-5261992)
chr4 (3-47)||(20986486-20986530)
chr4 (15-114)||(31301309-31301409)
chr4 (3-57)||(29636838-29636892)
chr4 (3-57)||(42557789-42557843)
chr4 (3-57)||(50570922-50570976)
chr4 (3-47)||(18319545-18319589)
chr4 (3-47)||(18399092-18399136)
chr4 (3-47)||(23625875-23625919)
chr4 (3-33)||(29644113-29644143)
chr4 (1-47)||(29700780-29700826)
chr4 (3-57)||(36077627-36077681)
chr4 (5-47)||(48602503-48602545)
chr4 (3-37)||(54274009-54274043)
chr4 (5-42)||(41325147-41325184)
chr4 (352-381)||(51395253-51395282)
[»] scaffold0059 (3 HSPs)
scaffold0059 (139-539)||(69008-69408)
scaffold0059 (254-539)||(77114-77399)
scaffold0059 (3-114)||(69448-69558)
[»] chr1 (39 HSPs)
chr1 (139-470)||(39256177-39256508)
chr1 (149-539)||(33910249-33910639)
chr1 (139-475)||(24910590-24910926)
chr1 (139-441)||(33474651-33474953)
chr1 (139-542)||(51251900-51252293)
chr1 (139-540)||(45692006-45692402)
chr1 (139-534)||(16528970-16529367)
chr1 (139-441)||(32954289-32954586)
chr1 (139-462)||(1160583-1160890)
chr1 (142-514)||(44918754-44919112)
chr1 (139-309)||(29389242-29389412)
chr1 (257-473)||(11899367-11899584)
chr1 (4-114)||(24910966-24911076)
chr1 (3-112)||(33474502-33474609)
chr1 (299-454)||(6722380-6722529)
chr1 (4-114)||(44918603-44918711)
chr1 (3-114)||(32954107-32954217)
chr1 (352-441)||(8211639-8211728)
chr1 (352-441)||(20494094-20494183)
chr1 (4-114)||(45691858-45691966)
chr1 (3-111)||(1161664-1161770)
chr1 (3-114)||(16529407-16529518)
chr1 (352-475)||(29707683-29707801)
chr1 (3-114)||(51252333-51252443)
chr1 (352-441)||(5154968-5155057)
chr1 (3-112)||(11899070-11899181)
chr1 (3-114)||(29389092-29389202)
chr1 (3-114)||(39256549-39256659)
chr1 (383-441)||(29390133-29390191)
chr1 (3-114)||(33910689-33910799)
chr1 (139-215)||(11899224-11899301)
chr1 (3-57)||(5155297-5155351)
chr1 (3-57)||(8211343-8211397)
chr1 (4-46)||(26345033-26345075)
chr1 (357-411)||(45949097-45949151)
chr1 (3-47)||(40095395-40095439)
chr1 (3-46)||(20493813-20493856)
chr1 (361-475)||(17652198-17652312)
chr1 (3-33)||(33769937-33769967)
[»] scaffold0013 (4 HSPs)
scaffold0013 (139-539)||(106244-106645)
scaffold0013 (139-379)||(128851-129092)
scaffold0013 (3-114)||(128701-128811)
scaffold0013 (3-114)||(106094-106204)
[»] chr2 (30 HSPs)
chr2 (139-475)||(44979312-44979648)
chr2 (139-536)||(25297732-25298129)
chr2 (139-441)||(44035519-44035821)
chr2 (163-469)||(11376120-11376421)
chr2 (142-416)||(17916454-17916730)
chr2 (142-539)||(19936598-19936990)
chr2 (139-493)||(34910518-34910873)
chr2 (244-536)||(18360115-18360407)
chr2 (118-302)||(20420386-20420572)
chr2 (118-248)||(18357457-18357589)
chr2 (352-539)||(9811739-9811926)
chr2 (3-113)||(44979689-44979797)
chr2 (365-540)||(16579002-16579177)
chr2 (352-475)||(20420777-20420900)
chr2 (3-114)||(34910367-34910478)
chr2 (352-475)||(36412898-36413021)
chr2 (3-111)||(42785545-42785652)
chr2 (3-114)||(25298169-25298279)
chr2 (351-441)||(42785101-42785191)
chr2 (3-111)||(18356958-18357066)
chr2 (7-114)||(17916773-17916880)
chr2 (3-111)||(19937036-19937143)
chr2 (5-106)||(44035372-44035471)
chr2 (3-111)||(11375956-11376063)
chr2 (361-475)||(41166625-41166739)
chr2 (357-541)||(44085956-44086139)
chr2 (3-57)||(9811445-9811499)
chr2 (3-57)||(16578700-16578754)
chr2 (3-57)||(36413604-36413658)
chr2 (3-47)||(41461141-41461185)
[»] chr7 (53 HSPs)
chr7 (139-539)||(43429378-43429778)
chr7 (139-488)||(22366660-22366999)
chr7 (139-488)||(24360819-24361166)
chr7 (139-538)||(32823806-32824195)
chr7 (139-450)||(31876208-31876514)
chr7 (139-475)||(13852518-13852852)
chr7 (142-539)||(36921029-36921423)
chr7 (222-540)||(42910153-42910466)
chr7 (182-488)||(10069816-10070112)
chr7 (139-488)||(47903444-47903778)
chr7 (142-385)||(48675325-48675568)
chr7 (118-475)||(31982208-31982543)
chr7 (257-541)||(27054198-27054483)
chr7 (266-470)||(18672762-18672966)
chr7 (3-244)||(18672962-18673218)
chr7 (139-470)||(5932854-5933159)
chr7 (352-539)||(47070027-47070214)
chr7 (352-483)||(3211735-3211866)
chr7 (352-539)||(10672178-10672365)
chr7 (118-263)||(36508876-36509024)
chr7 (3-114)||(32823658-32823767)
chr7 (3-111)||(27054652-27054760)
chr7 (3-114)||(22366510-22366620)
chr7 (3-114)||(24361206-24361316)
chr7 (3-114)||(24361412-24361522)
chr7 (366-539)||(8768203-8768376)
chr7 (371-539)||(11205915-11206083)
chr7 (352-540)||(12117959-12118147)
chr7 (352-440)||(47204093-47204181)
chr7 (3-114)||(48675171-48675282)
chr7 (8-114)||(31876554-31876658)
chr7 (3-114)||(31982912-31983024)
chr7 (3-114)||(1335377-1335487)
chr7 (3-114)||(13852368-13852478)
chr7 (311-470)||(36509028-36509173)
chr7 (28-114)||(43429253-43429338)
chr7 (66-114)||(5932766-5932814)
chr7 (66-110)||(10069327-10069371)
chr7 (357-509)||(40849325-40849477)
chr7 (413-488)||(1335884-1335959)
chr7 (4-47)||(2408945-2408988)
chr7 (118-174)||(10069763-10069821)
chr7 (3-57)||(3213186-3213240)
chr7 (3-57)||(11206332-11206386)
chr7 (3-57)||(12117659-12117713)
chr7 (3-57)||(47069733-47069787)
chr7 (357-458)||(524383-524484)
chr7 (3-33)||(10671885-10671915)
chr7 (3-37)||(36508001-36508035)
chr7 (66-111)||(7760226-7760271)
chr7 (174-215)||(27054549-27054590)
chr7 (357-458)||(29628680-29628781)
chr7 (66-111)||(47903356-47903401)
[»] scaffold0029 (3 HSPs)
scaffold0029 (139-470)||(40116-40447)
scaffold0029 (202-470)||(47312-47580)
scaffold0029 (3-111)||(40491-40598)
[»] scaffold0308 (2 HSPs)
scaffold0308 (352-540)||(5389-5577)
scaffold0308 (3-57)||(5857-5911)
[»] scaffold0664 (1 HSPs)
scaffold0664 (3-42)||(6060-6099)


Alignment Details
Target: chr5 (Bit Score: 482; Significance: 0; HSPs: 64)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 482; E-Value: 0
Query Start/End: Original strand, 3 - 660
Target Start/End: Original strand, 38433757 - 38434426
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||| || |||||||    
T  38433757 caaaccaaaccaatgcggcttggattggttcggtttgtgcggtttatcgcgagataaaaaaaatattacattaactctaatattgccaacttgttacaaa 38433856  T
Q  103 ataaacataggagttctaaccagattaaaatcaaacaa--cttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaag 200  Q
    |||||||||||||||||| ||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  38433857 ataaacataggagttctagccagattaaaaccaaacaaaacttataacaaaataggtaaaattaagaagaaacataagcgtgaaacaaattattgggaag 38433956  T
Q  201 aaaagaaaataaattcatcattggaaatgaattaaaggagatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagag 300  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  38433957 aaaagaaaataaattcatcattggaaatgaattaaaggagatgaaaaagaattagaatcgaacgtgatggtgcaacaatggaaaaatcgaattaaaagag 38434056  T
Q  301 attattcttaggctatgtaattgggctagtacaagtttaagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccg 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  38434057 attattcttaggctatgtaattgggctagtacaagtttaagtaatatttcttattcttgcggtttggtttggtttggttcggttgctgagatacaaaccg 38434156  T
Q  401 caaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttac 500  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||| ||| ||||||    
T  38434157 caaatcaaaccgaacctcacggttcagtgcaaaagtcatccaaattcatctaaaccaagtgcgattttttgcggtttcgatttggattagtttggtttac 38434256  T
Q  501 gatttttctgttgacttgatttggttttaaacacccc-------------taaaaacttgttgtgttctattatacaccgactataaca-ttaattatca 586  Q
    |||||||||||||| ||||||||||||| ||||||||             |||||| ||||||||    |||||||||||||||||||| |||| |||||    
T  38434257 gatttttctgttgagttgatttggttttgaacacccctaattttgaccaataaaaatttgttgtg----attatacaccgactataacagttaaatatca 38434352  T
Q  587 cgtcaataaatgatatcatctcaaagtaaattttagacaaaattgagaggcttcaaaatcgggagatggactac 660  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38434353 cgtcaataaattatatcatctcaaagtaaattttagacaaaattgagaggcttcaaaatcgggagatggactac 38434426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 139 - 539
Target Start/End: Complemental strand, 12680948 - 12680548
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||  ||| |||| ||| |||||||||| | |||||||||| || |    
T  12680948 aacttatataaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgaaaagtaaaggaaacaaattcatcacttgaaatgaattgaaag 12680849  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||| ||| | |||||||||||||||||||| ||||    
T  12680848 agatggaaaggaattagaatcgaacctgatggtgcaacaatggaaaaatcgaatcaaaagagattatttttaagttatgtaattgggctagtacatgttt 12680749  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||  | ||||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||| |||| ||||||||| |||||||||||    
T  12680748 aagtaatattcatcattcttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccaaaccaaaccgcgcggttcattgcaaaagtca 12680649  T
Q  439 tccaaattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacacccct 538  Q
    ||| ||||||||| ||||||||||| |||||| |||| ||  ||| ||||  |||  ||| || ||||||| |||| ||| || |||||| |||||||||    
T  12680648 tccgaattcatctgaaccaagtgcggttttttgcggtttcagtttggattggtttgatttgcggtttttctattgaattggttcggttttgaacacccct 12680549  T
Q  539 a 539  Q
    |    
T  12680548 a 12680548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 148 - 509
Target Start/End: Complemental strand, 2226747 - 2226386
Alignment:
Q  148 caaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaaggagatggaaa 247  Q
    |||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||| ||| | ||||||||  ||||||||||| || ||||||||||    
T  2226747 caaaataggtaaaattaagaagaaacttaatcatgaaacaaattattgggaagtaaaggaaacatattcatcacaggaaatgaattgaaagagatggaaa 2226648  T
Q  248 ggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaagtaatat 347  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||| |  ||||||||||||||||| |||| |||||||||||||    
T  2226647 ggaattagaatcgaacctgatggtgcaacaatggaaaaatcgaatcaaaagagattattcatgagctatgtaattgggctaatacatgtttaagtaatat 2226548  T
Q  348 ttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattc 447  Q
    |  ||||||| ||||||||||||||||||||||||||| |||||| ||||||||||| | ||| ||||| ||||||| |||||||||||||||| |||||    
T  2226547 tcattattctggcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaactgaaccgcgcggttaagtgcaaaagtcatccgaattc 2226448  T
Q  448 atctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttct 509  Q
    |||  ||||||||||| |||||| |||| |||||||  ||||||||  ||||||||||||||    
T  2226447 atccgaaccaagtgcggttttttgcggtttcgatttgaattaatttgatttacgatttttct 2226386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 139 - 470
Target Start/End: Original strand, 9161192 - 9161521
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||| || |    
T  9161192 aacttatatctaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagtaaaggaaataaattcatcactggaaatgaattcaaag 9161291  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    |||||||||||||||||||| |||| ||||||| |||||||||||||||||||| |||||||||||||  |  |||||||  |||||||||| ||  |||    
T  9161292 agatggaaaggaattagaattgaacttgatggtgcaacaatggaaaaatcgaatcaaaagagattatttctgagctatgt--ttgggctagtgcatattt 9161389  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||  |||||||||||||| |||||||||||||||||||| |||||| ||||||||||| | ||||||||| | |||||||||||||||||||    
T  9161390 aagtaatattcattattcttgcggttgggtttggtttggttcggttgctgagattcaaaccgcaaaccgaaccgaaccgcacggttcagtgcaaaagtca 9161489  T
Q  439 tccaaattcatctaaaccaagtgcgatttttt 470  Q
    ||  ||||||||  |||||||| || ||||||    
T  9161490 tctgaattcatccgaaccaagtacggtttttt 9161521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 139 - 461
Target Start/End: Complemental strand, 36103484 - 36103162
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||  ||| |||||||||| || ||||||||| || |    
T  36103484 aacttatatcaaaataggtaaaattaagaagaaacataagcatcaaacaaattattggaaagtaaatgaaacaaattcatcactgtaaatgaattgaaag 36103385  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||  ||||||||||  |||||||| ||||||||||||| |||     
T  36103384 agatggaaaggaattagaatcgaacttgatggtgcaacaatggaaaaatcgaatcaaaaacgattattcttgagctatgtagttgggctagtacatgttc 36103285  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||| |||||| |||||  |||| |||| |||||| |||||||||||||||||||||    
T  36103284 aagtaatattcattattcttgcggtttggtttggtttggttcggttgctgagatgcaaactacaaaccaaaacgaaccgcgcggttcagtgcaaaagtca 36103185  T
Q  439 tccaaattcatctaaaccaagtg 461  Q
    ||  ||||||||  |||||||||    
T  36103184 tctgaattcatccgaaccaagtg 36103162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 139 - 542
Target Start/End: Complemental strand, 333156 - 332761
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||  ||||||||||| || |    
T  333156 aacttatatcaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagtaaaagaaataaattcatcacgggaaatgaattgaaag 333057  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggc--tatgtaattgggctagtacaagt 336  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||||||||||||| |||| |||||||||||  ||  ||||||||||||| |||||| ||    
T  333056 agatagaaaggaattagaatcgaacttgatggtgcaattatggaaaaatcgaatcaaaatagattattcttgagctatatgtaattgggccagtacatgt 332957  T
Q  337 ttaagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagt 436  Q
    ||||||||||||  ||||||||||||||| |||||||||||||||| || |||||| ||||||||||| ||||||||||  |||||||||||||||||||    
T  332956 ttaagtaatattcattattcttgcggtttagtttggtttggttcggatgctgagatgcaaaccgcaaaccaaaccgaactgcgcggttcagtgcaaaagt 332857  T
Q  437 catccaaattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacaccc 536  Q
    | |||           ||||||||||| ||||||||| | ||| |||  ||| |||||||||||||||||||| |||  ||| || |||||| |||||||    
T  332856 cgtcc----------gaaccaagtgcggttttttacgatttcggtttgaattgatttagtttacgatttttctattgggttggttcggttttgaacaccc 332767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 149 - 540
Target Start/End: Complemental strand, 32521083 - 32520697
Alignment:
Q  149 aaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaaggagatggaaag 248  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||  ||| |||||||||| | |||||||||| || ||||||||||     
T  32521083 aaaatcggtataattaagaagaaacataagcatgaaacaaattattgggaagtaaaagaaacaaattcatcacttgaaatgaattgaaagagatggaaat 32520984  T
Q  249 gaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaagtaatatt 348  Q
    ||| ||||||||||| ||||||| |||||||| ||||||||||| |||||||||||||||||   ||||||||||||||||||||  |||||||||||||    
T  32520983 gaactagaatcgaacctgatggtgcaacaatgaaaaaatcgaatcaaaagagattattcttaaattatgtaattgggctagtacatctttaagtaatatt 32520884  T
Q  349 tcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattca 448  Q
      | ||||||||||||||||||     |||||||||| |||||| || | |||||| ||||||||||| ||||||||| |||||||||||||| ||||||    
T  32520883 catcattcttgcggtttggttt-----ggttcggttgctgagatgcagatcgcaaaccaaaccgaaccgcgcggttcattgcaaaagtcatccgaattca 32520789  T
Q  449 tctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacacccctaa 540  Q
    ||  ||||||||||| |||||| |||| ||| ||| ||||  ||| |||| || ||||||| |||  ||| || |||||| |||||||||||    
T  32520788 tccgaaccaagtgcggttttttgcggtttcggtttggattggtttggtttgcggtttttctattgggttggttcggttttgaacacccctaa 32520697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 165; E-Value: 9e-88
Query Start/End: Original strand, 139 - 484
Target Start/End: Complemental strand, 30265667 - 30265326
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataag--catgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaa 236  Q
    |||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||| ||| |||||||||| |||||||||||| ||    
T  30265667 aacttatatcaaaataggtaaaattaagaagaaacataagagcatgaaacaaattattgggaagtaaaggaaacaaattcatcactggaaatgaattgaa 30265568  T
Q  237 ggagatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagt 336  Q
     ||||||||||  |||||||||||||| ||||||| ||||||||||||||||||||| |||| | ||||| ||  |||||||||||||||||| ||| |     
T  30265567 agagatggaaaataattagaatcgaacttgatggtgcaacaatggaaaaatcgaattgaaagcg-ttatttttgagctatgtaattgggctagcacatga 30265469  T
Q  337 ttaagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagt 436  Q
    ||||||||||||  ||||||||||| ||||||||| ||||||||||||| |||||| ||||||||||| | ||||| ||     |||| |||||||||||    
T  30265468 ttaagtaatattcattattcttgcgatttggtttgatttggttcggttgctgagatgcaaaccgcaaaccgaaccgtac-----ggtttagtgcaaaagt 30265374  T
Q  437 catccaaattcatctaaaccaagtgcgattttttacggtatcgattta 484  Q
    ||||  ||||||||  || |||||||||||||||||| | ||||||||    
T  30265373 catctgaattcatccgaatcaagtgcgattttttacgatttcgattta 30265326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 182 - 488
Target Start/End: Complemental strand, 12165773 - 12165467
Alignment:
Q  182 gaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaaggagatggaaaggaattagaatcgaacgtgatggtacaacaatgg 281  Q
    ||||||||||||||  ||| |||| ||| |||||||||| ||||||| |||  || |||||| |||||||||| ||| |||| ||||||| |||||||||    
T  12165773 gaaacaaattattgacaagtaaaggaaacaaattcatcactggaaataaatcgaaagagatgaaaaggaattaaaattgaacctgatggtgcaacaatgg 12165674  T
Q  282 aaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaagtaatatttcttattcttgcggtttggtttggtttggttcg 381  Q
    ||| |||||||  |||||||||||||||  |||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||| |||||||||     
T  12165673 aaagatcgaatcgaaagagattattcttgagctatgtaattgggctagtacatgtttaagtaatattcattattcttgcggtttggtttcgtttggttca 12165574  T
Q  382 gttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatctaaaccaagtgcgattttttacggtatcgat 481  Q
    |||| |||||| ||||| ||||| | |||||||||  ||||||||||||||||||||||| ||||||||  ||||||||||| |||||| |||| ||| |    
T  12165573 gttgctgagatgcaaactgcaaaccgaaccgaaccatgcggttcagtgcaaaagtcatccgaattcatccgaaccaagtgcggttttttgcggtttcggt 12165474  T
Q  482 ttagatt 488  Q
    || ||||    
T  12165473 ttggatt 12165467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 139 - 509
Target Start/End: Complemental strand, 36176973 - 36176623
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||||| ||||||||| ||| |||| ||| ||||||||||||||||||||||  || |    
T  36176973 aacttatatcaaaattggtaaaattaagaagaaatataagcatgaaactaattattggaaagtaaaggaaacaaattcatcattggaaatgaatcgaaag 36176874  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    |||||||||||||||||||| |||| ||||||| ||||| ||                    ||| |||||  |||||||||||||||||||||| ||||    
T  36176873 agatggaaaggaattagaattgaacctgatggtgcaacagtg--------------------atttttcttgagctatgtaattgggctagtacacgttt 36176794  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    |||||||| |  ||||||||||||||||||||| ||||||||||||| |||||| ||||||||||| ||| |||||||  |||||| |||||||||||||    
T  36176793 aagtaatagtcattattcttgcggtttggtttgatttggttcggttgctgagatgcaaaccgcaaaccaacccgaaccatgcggtttagtgcaaaagtca 36176694  T
Q  439 tccaaattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttct 509  Q
    ||| |||||||   ||||||||||| |||||| |||| ||| ||| ||||  ||| |||| || |||||||    
T  36176693 tccgaattcattcgaaccaagtgcggttttttgcggtttcggtttggattggtttggtttgcggtttttct 36176623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 142 - 540
Target Start/End: Original strand, 10174285 - 10174665
Alignment:
Q  142 ttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaaggaga 241  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||| | ||| |||| ||| |||||||||| | ||||          ||||    
T  10174285 ttatatcaaaataggtaaaattaagaagaaacataaacatgaaacaaattattagaaagtaaaggaaacaaattcatcacttgaaa----------gaga 10174374  T
Q  242 tggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaag 341  Q
    || ||| |||||| |||||||| ||||||| |||||||| ||||||||||| ||||||||||   |||  | |||||||||||| ||||||| |||||||    
T  10174375 tgaaaatgaattataatcgaacctgatggtgcaacaatgaaaaaatcgaatcaaaagagatt---cttgagttatgtaattgggatagtacatgtttaag 10174471  T
Q  342 taatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatcc 441  Q
    |||||||  ||    ||||||||||||||||||||||||||||| |||||| ||||||||||||| || | |||| ||||||||||||||||||||||||    
T  10174472 taatattcatt----ttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaatcgaa-caaaccgcgcggttcagtgcaaaagtcatcc 10174566  T
Q  442 aaattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacacccctaa 540  Q
     ||||||||  || |||||||| ||||||  ||| ||| ||| ||||  ||| |||| || ||||||| |||  ||| || |||||| |||||||||||    
T  10174567 gaattcatccgaatcaagtgcggttttttgtggtttcggtttggattggtttggtttgcggtttttctattgggttggttcggttttgaacacccctaa 10174665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 285 - 539
Target Start/End: Complemental strand, 36176616 - 36176362
Alignment:
Q  285 aatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaagtaatatttcttattcttgcggtttggtttggtttggttcggtt 384  Q
    |||||||| |||||||||| |||||  |||||||||||||||||||||| |||||||||||| |  ||||||||||||||||||||| ||||||||||||    
T  36176616 aatcgaatcaaaagagatttttcttgagctatgtaattgggctagtacacgtttaagtaatagtcattattcttgcggtttggtttgatttggttcggtt 36176517  T
Q  385 gttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatctaaaccaagtgcgattttttacggtatcgattta 484  Q
    | |||||| ||||||||||| ||| |||||||  |||||| |||||||||||||||| |||||||   |||||||||||||||||| |||| |||||||     
T  36176516 gctgagatgcaaaccgcaaaccaacccgaaccatgcggtttagtgcaaaagtcatccgaattcattcgaaccaagtgcgattttttgcggtttcgatttg 36176417  T
Q  485 gattaatttagtttacgatttttctgttgacttgatttggttttaaacaccccta 539  Q
    ||||  ||||||||||| ||||||| |||  ||| || |||||| ||||||||||    
T  36176416 gattggtttagtttacggtttttctattgggttggttcggttttgaacaccccta 36176362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 118 - 302
Target Start/End: Complemental strand, 38334860 - 38334674
Alignment:
Q  118 ctaaccagattaaaatcaaaca--acttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaatt 215  Q
    ||||||| |||||| |||||||  |||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||| |||||    
T  38334860 ctaaccatattaaattcaaacacaacttatattaaaataggtaaaattaagaagaaacataagcatgaatcaaattattgggaagaaaatgaaacaaatt 38334761  T
Q  216 catcattggaaatgaattaaaggagatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagat 302  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | ||||||||| |||||||||||||| |||||    
T  38334760 catcattggaaatgaattgaaggagatggaaaggaattagaatcgaacctgatgatgcaacaatgggaaaatcgaattaaaggagat 38334674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 139 - 374
Target Start/End: Complemental strand, 17084748 - 17084513
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| ||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||||||| ||| |||||||||| || ||||  ||| ||||    
T  17084748 aacttatatcaaaataggtaaaattaggaagaaacataagcgtgaaataaattattggggagaaaaggaaacaaattcatcactgaaaattgattgaagg 17084649  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    ||||| |||  || |||| |||||| ||||||| ||| |||||||||||||||| |||| |||||||| || |  |||||||||||| ||||||||||||    
T  17084648 agatgaaaaacaaatagattcgaacttgatggtgcaataatggaaaaatcgaatcaaaatagattatttttggattatgtaattgggttagtacaagttt 17084549  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtt 374  Q
    ||||||||||  ||||||||||||||||||| ||||    
T  17084548 aagtaatattgattattcttgcggtttggttcggtt 17084513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 139 - 488
Target Start/End: Original strand, 23780943 - 23781263
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||     ||||||||||| || |    
T  23780943 aacttatatcaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagtaaaggaaacaaattca-----ggaaatgaattgaaag 23781037  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||| ||| ||||||||||||||||  |||| |||||||||                 
T  23781038 agatggaaaggaattagaatcgaacccgatggtacaacaatggaaaaatcaaatcaaaagagattattcttgagctaagtaattggg------------- 23781124  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
        ||||||  ||||| |||||||||||||||| ||||||| |||| |||||| |||||||       ||||||||| ||| |||||||||||||||||    
T  23781125 ----aatattcattatttttgcggtttggtttggcttggttcagttgctgagatgcaaaccg-------aaccgaaccgcgcagttcagtgcaaaagtca 23781213  T
Q  439 tccaaattcatctaaaccaagtgcgattttttacggtatcgatttagatt 488  Q
    ||  || |||||  | ||||||||| |||||| |||| ||| ||| ||||    
T  23781214 tctgaaatcatccgatccaagtgcggttttttgcggtttcggtttggatt 23781263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 139 - 488
Target Start/End: Original strand, 23867896 - 23868216
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||     ||||||||||| || |    
T  23867896 aacttatatcaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagtaaaggaaacaaattca-----ggaaatgaattgaaag 23867990  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||| ||| ||||||||||||||||  |||| |||||||||                 
T  23867991 agatggaaaggaattagaatcgaacccgatggtacaacaatggaaaaatcaaatcaaaagagattattcttgagctaagtaattggg------------- 23868077  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
        ||||||  ||||| |||||||||||||||| ||||||| |||| |||||| |||||||       ||||||||| ||| |||||||||||||||||    
T  23868078 ----aatattcattatttttgcggtttggtttggcttggttcagttgctgagatgcaaaccg-------aaccgaaccgcgcagttcagtgcaaaagtca 23868166  T
Q  439 tccaaattcatctaaaccaagtgcgattttttacggtatcgatttagatt 488  Q
    ||  || |||||  | ||||||||| |||||| |||| ||| ||| ||||    
T  23868167 tctgaaatcatccgatccaagtgcggttttttgcggtttcggtttggatt 23868216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 3 - 315
Target Start/End: Complemental strand, 9988878 - 9988586
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||| |||||||||||| || ||||||||||||  ||||||||| |||||||||        |||||||||||||||||||||||||| || |||||||    
T  9988878 caaacaaaaccaatgcggcttagattggttcggtg-gtgcggtttatcgcgagataaaaaaa-tattacattaactctaatattgccaacttgttacaaa 9988781  T
Q  103 ataaacataggagttctaaccagattaaaatcaaacaacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaa 202  Q
    |||||||||||||||||||||||||||||| |||||||                  ||||||||||||||||||| |||||||||||||||| | |||||    
T  9988780 ataaacataggagttctaaccagattaaaaccaaacaa------------------aaattaagaagaaacataaacatgaaacaaattatttgaaagaa 9988699  T
Q  203 aagaaaataaattcatcattggaaatgaattaaaggagatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagat 302  Q
    ||| ||| |||||||||| | |||||||||| ||||||||| |||||||||| |||||||  ||||||| ||| |||| |||||| |||| |||||||||    
T  9988698 aaggaaacaaattcatcactagaaatgaattgaaggagatgaaaaggaattaaaatcgaatctgatggtgcaagaatgaaaaaattgaatcaaaagagat 9988599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 730 - 874
Target Start/End: Original strand, 38434496 - 38434632
Alignment:
Q  730 tcatgatatttggtgagtttaaagtgcaattaagcctccatttaagtagacctttagcttttgactgtgtttcattgaaattaataattagttaattaca 829  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||        |||| |||    
T  38434496 tcatgatatttggtgagtttaaagtgcaattaagcctcaatttaagtagacctttagcttttgactgtgtttcattgaaattaa--------taatcaca 38434587  T
Q  830 taaggaagctattgtttcttcaagaagtccttggaacattgtttt 874  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  38434588 taaggaagctattgtttcttcaagaagtccttggaacattgtttt 38434632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 182 - 348
Target Start/End: Original strand, 35893238 - 35893405
Alignment:
Q  182 gaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaaggagatggaaa-ggaattagaatcgaacgtgatggtacaacaatg 280  Q
    ||||||||||||||||||| |||| ||| |||||||||| |||||||||||| ||  ||||||||| |||||||||||||| ||||||||| ||||||||    
T  35893238 gaaacaaattattgggaagtaaaggaaacaaattcatcactggaaatgaattgaaaaagatggaaaaggaattagaatcgagcgtgatggtgcaacaatg 35893337  T
Q  281 gaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaagtaatatt 348  Q
     ||||||| |||  |||||||||||||||  |||||||||||||||||||||| ||||||||||||||    
T  35893338 aaaaaatcaaatcgaaagagattattcttgagctatgtaattgggctagtacatgtttaagtaatatt 35893405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 139 - 360
Target Start/End: Original strand, 42544863 - 42545086
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatga--attaaa 236  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||| |||| |||| ||| |||||||||| |||||||||  ||| ||    
T  42544863 aacttatatcaaaataggtaaaattaagaagaaatataagcatgaaataaattattgagaagtaaaggaaacaaattcatcactggaaatgaatattgaa 42544962  T
Q  237 ggagatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagt 336  Q
     |||||||||| |||||| |||| | | | ||||| |||||||| | || | |||| |||  |||||||||||  ||||||| ||||||||| ||||  |    
T  42544963 agagatggaaaagaattaaaatcaagccttatggtgcaacaatgaacaagttgaatcaaattagattattcttgagctatgttattgggctattacatat 42545062  T
Q  337 ttaagtaatatttcttattcttgc 360  Q
    ||||||||||||  ||||||||||    
T  42545063 ttaagtaatattcattattcttgc 42545086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 352 - 539
Target Start/End: Original strand, 15068825 - 15069012
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| ||||||||||||||||||||||| |||||||||||| ||||||||||| | ||||||||| |||||||||||  ||||||||||| || |||||     
T  15068825 tatttttgcggtttggtttggtttggtttggttgttgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 15068924  T
Q  452 aaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacaccccta 539  Q
     ||||||||||| |||||| |||| ||||||| | ||  ||  |||| || ||||||| |||  ||| ||||||||| ||||||||||    
T  15068925 gaaccaagtgcggttttttgcggtttcgatttgggttggttcggtttgcggtttttctattgggttggtttggttttgaacaccccta 15069012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 370 - 507
Target Start/End: Original strand, 42545822 - 42545959
Alignment:
Q  370 tggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatctaaaccaagtgcgattttt 469  Q
    ||||||||||||||||||||||| ||||||||||| | ||||||||| ||||||| |||||||||||||||  ||||||||  |||||||||| ||||||    
T  42545822 tggtttggttcggttgttgagatgcaaaccgcaaaccgaaccgaaccgcgcggtttagtgcaaaagtcatctgaattcatccgaaccaagtgcaattttt 42545921  T
Q  470 tacggtatcgatttagattaatttagtttacgattttt 507  Q
    | |||| ||||||| ||||  ||| ||||||| |||||    
T  42545922 tgcggtttcgatttggattggtttggtttacggttttt 42545959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 352 - 488
Target Start/End: Original strand, 11917804 - 11917940
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||||| ||||||| |||  ||||||||||| || |||||     
T  11917804 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggtttagtctaaaagtcatccgaactcatcc 11917903  T
Q  452 aaaccaagtgcgattttttacggtatcgatttagatt 488  Q
    |||||||||||| |||||| |||| ||| ||| ||||    
T  11917904 aaaccaagtgcggttttttgcggtttcggtttggatt 11917940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 42544713 - 42544821
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||| || |||||||    
T  42544713 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttatcgcgagat-aaaaaaatattacattaactctaatattgccaacttgttacaaa 42544811  T
Q  103 ataaacatag 112  Q
    ||||||||||    
T  42544812 ataaacatag 42544821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 352 - 475
Target Start/End: Complemental strand, 666992 - 666869
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||||| |||||||||||  ||||||||||| || |||||     
T  666992 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 666893  T
Q  452 aaaccaagtgcgattttttacggt 475  Q
     ||||||||||| |||||| ||||    
T  666892 gaaccaagtgcggttttttgcggt 666869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 2226907 - 2226796
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||| | |||||||||||||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||| || |||||||    
T  2226907 caaaccaatctaatgcggtttggattggttcggtttgtgcggtttatcgcgagataaaaaaaatattacattaactctaatattgccaacttgttacaaa 2226808  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  2226807 ataaacatagga 2226796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 352 - 475
Target Start/End: Complemental strand, 27885807 - 27885684
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||||| |||||||||||  ||||||||||| || |||||     
T  27885807 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 27885708  T
Q  452 aaaccaagtgcgattttttacggt 475  Q
     ||||||||||| |||||| ||||    
T  27885707 gaaccaagtgcggttttttgcggt 27885684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 352 - 483
Target Start/End: Complemental strand, 38334475 - 38334344
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| |||||||||||||| |||||||||||||| |||||| ||||||||||| | ||||||||| |||||||||||  ||||||||||| || |||||     
T  38334475 tatttttgcggtttggtttagtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 38334376  T
Q  452 aaaccaagtgcgattttttacggtatcgattt 483  Q
     ||||||||||| |||||| |||| |||||||    
T  38334375 gaaccaagtgcggttttttgcggtttcgattt 38334344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 352 - 475
Target Start/End: Original strand, 701566 - 701689
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||||| | |||||||||  |||||| |||  |||||||||||||| |||||     
T  701566 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgtgcggtttagtctaaaagtcatccaaactcatcc 701665  T
Q  452 aaaccaagtgcgattttttacggt 475  Q
     ||||||||||| |||||| ||||    
T  701666 gaaccaagtgcggttttttgcggt 701689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 352 - 475
Target Start/End: Original strand, 8409335 - 8409458
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||||| |||| ||||||  ||||||||||| || |||||     
T  8409335 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcgattcagtctaaaagtcatccgaactcatcc 8409434  T
Q  452 aaaccaagtgcgattttttacggt 475  Q
     ||||||||||| |||||| ||||    
T  8409435 gaaccaagtgcggttttttgcggt 8409458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 9161043 - 9161152
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||        |||||||||||||||||||||||||| || | |||||    
T  9161043 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttatcgcaagat--aaaaaatattacattaactctaatattgccaacttgtcacaaa 9161140  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  9161141 ataaacatagga 9161152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 352 - 475
Target Start/End: Original strand, 30002347 - 30002470
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| ||||||||||||||||||||||||||||| ||||||  |||||||||| | ||||||||| |||||||||||  |||| |||||| || |||||     
T  30002347 tatttttgcggtttggtttggtttggttcggttgctgagatgtaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaaatcatccgaactcatcc 30002446  T
Q  452 aaaccaagtgcgattttttacggt 475  Q
     ||||||||||| |||||| ||||    
T  30002447 gaaccaagtgcggttttttgcggt 30002470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 12681097 - 12680988
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||||||||||||||||||| ||||||||| |||| ||| |||||        |||||||||||||||||||||||||| || |||||||    
T  12681097 caaaccaaaccaatgcggtttggattggttaggtttgtgcagtttatcgtgagataaaaaa--tattacattaactctaatattgccaacttgttacaaa 12681000  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  12680999 ataaacatagga 12680988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 36177123 - 36177013
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||||||| ||||||||||| |||||||||||||| |||| ||||        |||||||||||||||||||||||||| || |||||||    
T  36177123 caaaccaaaccaatgcggcttggattggttgggtttgtgcggtttatcgcaagataaaaaaa-tattacattaactctaatattgccaacttgttacaaa 36177025  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  36177024 ataaacatagga 36177013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 32521245 - 32521133
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnn-tattacattaactctaatattgccaatttattacaa 101  Q
    ||||||||| |||||| |||||||||||||||||||||||||||| ||| |||||         |||||||||||||||||||||||||| || ||||||    
T  32521245 caaaccaaatcaatgcagtttggattggttcggtttgtgcggtttatcgtgagataaaaaaaaatattacattaactctaatattgccaacttgttacaa 32521146  T
Q  102 aataaacatagga 114  Q
    |||||||||||||    
T  32521145 aataaacatagga 32521133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 30265818 - 30265707
Alignment:
Q  4 aaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnnta-ttacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||||||||||| ||| ||| |||||||||||||||||  |||||||||         | |||||||||||||||||||||||| ||||||||||    
T  30265818 aaaccaaaccaatgcggcttgaattagttcggtttgtgcggttcatcgcgagataaaaaaaaaaattacattaactctaatattgccaacttattacaaa 30265719  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  30265718 ataaacatagga 30265707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 36103634 - 36103527
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||| |||||| ||||||||| ||||||||||||||||||  ||||||||        |||||||||||||||||||||||||| || |||||||    
T  36103634 caaaccaaatcaatgcagtttggattcgttcggtttgtgcggtttaccgcgagatgtaaaaa-tattacattaactctaatattgccaacttgttacaaa 36103536  T
Q  103 ataaacata 111  Q
    |||||||||    
T  36103535 ataaacata 36103527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 12166192 - 12166084
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||||||| ||||||||||| |||||||| ||||| || ||||||        ||||||||||||||||| |||| ||| || |||||||    
T  12166192 caaaccaaaccaatgcggcttggattggtttggtttgtgtggtttatcacgagataaaaaaaatattacattaactctaacattgtcaacttgttacaaa 12166093  T
Q  103 ataaacata 111  Q
    |||||||||    
T  12166092 ataaacata 12166084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 371 - 535
Target Start/End: Original strand, 35359464 - 35359623
Alignment:
Q  371 ggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatctaaaccaagtgcgatttttt 470  Q
    ||||||||| |||| ||||||| ||||||||||||| ||||| ||      ||||||||||||| |||||| ||||||||   |||||||||| ||||||    
T  35359464 ggtttggtttggtttttgagatgcaaaccgcaaatcgaaccgcact-----gttcagtgcaaaaatcatccgaattcatccgcaccaagtgcggtttttt 35359558  T
Q  471 acggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacacc 535  Q
     |||| |||||||  |||| ||||||||||||||| ||| |||  ||| || | |||||||||||    
T  35359559 gcggtttcgatttgaattagtttagtttacgatttatctattgggttggttcgattttaaacacc 35359623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 351 - 540
Target Start/End: Original strand, 35893443 - 35893626
Alignment:
Q  351 ttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatc 450  Q
    ||||||||||||||||||||||||||  | | ||||||||||       ||||||| ||||| ||| |||| |||||| |||||||||||| ||||||||    
T  35893443 ttattcttgcggtttggtttggtttgacttgattgttgagat-------gcaaatcgaaccggaccgcgcgattcagtacaaaagtcatccgaattcatc 35893535  T
Q  451 taaaccaagtgcgattttttacggtatcgatttagattaatttagtttac-gatttttctgttgacttgatttggttttaaacacccctaa 540  Q
      ||||||||||| |||||| |||| |||||||  |||  |||  ||||| | ||||| | |||  ||| |||||||||||||||||||||    
T  35893536 cgaaccaagtgcggttttttgcggtttcgatttgaattggtttgatttacggttttttttattggattggtttggttttaaacacccctaa 35893626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 333305 - 333199
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||||| | ||| ||||||| |||||||||||||| |||||||||        |||||||||||||||||||||| ||| || |||||||    
T  333305 caaaccaaaccaatgcagcttgaattggtttggtttgtgcggtttatcgcgagat--aaaaaatattacattaactctaatattgtcaacttgttacaaa 333208  T
Q  103 ataaacata 111  Q
    |||||||||    
T  333207 ataaacata 333199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 35358996 - 35359106
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||| ||| ||||||| ||||||||  |||||||| |||||||||        |||||||||||||||||||||||||| || ||||||     
T  35358996 caaaccaaaccaatacggcttggattagttcggttgatgcggtttatcgcgagataaaaaag-tattacattaactctaatattgccaacttgttacaac 35359094  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  35359095 ataaacatagga 35359106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 35893188 - 35893247
Alignment:
Q  156 gtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaatt 215  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||| ||| |||||    
T  35893188 gtaaagttaagaagaaacataagcatgaaacaaattattgggaagtaaaggaaacaaatt 35893247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 188
Target Start/End: Complemental strand, 12166041 - 12165992
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaa 188  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  12166041 aacttatatcaaaatagataaaattaagaagaaacataagcatgaaacaa 12165992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 10174140 - 10174239
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||||||||||||||||||||||||| |         ||||||||        |||||||||||||||||||||||||| || |||||||    
T  10174140 caaaccaaaccaatgcggtttggattggttcggtttat---------cgcgagataaaaaaaatattacattaactctaatattgccaacttgttacaaa 10174230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 357 - 416
Target Start/End: Complemental strand, 691226 - 691167
Alignment:
Q  357 ttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacc 416  Q
    ||||||||||||||||||||||||||||| | | ||  ||||||||||||||||| ||||    
T  691226 ttgcggtttggtttggtttggttcggttggtaaaatgaaaaccgcaaatcaaaccaaacc 691167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 366 - 540
Target Start/End: Original strand, 2423279 - 2423453
Alignment:
Q  366 ggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatctaaaccaagtgcgat 465  Q
    |||||||||||||||||||| | | ||  ||||||||||||||||| ||||  | |||| || | |||||| ||| |||| |||| |||| || |||| |    
T  2423279 ggtttggtttggttcggttggtaaaatgaaaaccgcaaatcaaaccaaaccatgtggttgagggaaaaagtgatcaaaatacatccaaacaaaatgcggt 2423378  T
Q  466 tttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacacccctaa 540  Q
    |||||  ||| ||||||| | || ||| ||||| | |||||||| |||  ||| || | |||| |||||||||||    
T  2423379 tttttgtggtttcgatttgggttgattcagtttgcaatttttctattggattggttcgcttttgaacacccctaa 2423453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 8409055 - 8409109
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat 57  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||||||||    
T  8409055 caaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagat 8409109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 11917470 - 11917524
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat 57  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||||||||    
T  11917470 caaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagat 11917524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 15068525 - 15068579
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat 57  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||||||||    
T  15068525 caaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagat 15068579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 27886444 - 27886390
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat 57  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||||||||    
T  27886444 caaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagat 27886390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 321 - 379
Target Start/End: Complemental strand, 9988593 - 9988538
Alignment:
Q  321 ttgggctagtacaagtttaagtaatatttcttattcttgcggtttggtttggtttggtt 379  Q
    |||||||||||||||||||| ||||||   | ||| |||||||||||||||||||||||    
T  9988593 ttgggctagtacaagtttaaataatat---tgattattgcggtttggtttggtttggtt 9988538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 27572063 - 27572019
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggttt 47  Q
    ||||||||||||||||||||||| |||| |||||| |||||||||    
T  27572063 caaaccaaaccaatgcggtttgggttggatcggttggtgcggttt 27572019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 36567776 - 36567820
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggttt 47  Q
    |||||||||||||||||||||||||||| |||||| |||| ||||    
T  36567776 caaaccaaaccaatgcggtttggattggatcggttggtgcagttt 36567820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 41454928 - 41454972
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggttt 47  Q
    |||||||||||||||||||||||||||| || ||| |||||||||    
T  41454928 caaaccaaaccaatgcggtttggattggatctgttggtgcggttt 41454972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 7591583 - 7591540
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtt 46  Q
    ||||||||||||| |||  |||||||||||||||||||||||||    
T  7591583 caaaccaaaccaaagcgacttggattggttcggtttgtgcggtt 7591540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 428 - 539
Target Start/End: Complemental strand, 9988520 - 9988409
Alignment:
Q  428 tgcaaaagtcatccaaattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttt 527  Q
    |||||||||||||||||||||||  |||||| ||| |||||||||| | ||| |||| |||  ||| ||||||  ||||||| |||  ||| || |||||    
T  9988520 tgcaaaagtcatccaaattcatccgaaccaaatgcaattttttacgatttcggtttaaattggtttggtttacagtttttctattggattggttcggttt 9988421  T
Q  528 taaacaccccta 539  Q
    | ||||| ||||    
T  9988420 tgaacactccta 9988409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 47
Target Start/End: Complemental strand, 20191997 - 20191958
Alignment:
Q  8 caaaccaatgcggtttggattggttcggtttgtgcggttt 47  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  20191997 caaaccaatgcggtttgaattggatcggtttgtgcggttt 20191958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 30002066 - 30002109
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtt 46  Q
    ||||||||||||||||||||||||||||||| |||  |||||||    
T  30002066 caaaccaaaccaatgcggtttggattggttcagttgatgcggtt 30002109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 667642 - 667612
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttc 33  Q
    |||||||||||||||||||||||||||||||    
T  667642 caaaccaaaccaatgcggtttggattggttc 667612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 701285 - 701339
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat 57  Q
    ||||||||| ||||||||||||||||||||| |||  |||||||  |||||||||    
T  701285 caaaccaaatcaatgcggtttggattggttcagttgatgcggttaatcgcgagat 701339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 357 - 411
Target Start/End: Original strand, 18432556 - 18432610
Alignment:
Q  357 ttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaacc 411  Q
    ||||||||||||||| ||||||||||||| | | ||| |||||||||| ||||||    
T  18432556 ttgcggtttggtttgatttggttcggttgataaaataaaaaccgcaaaccaaacc 18432610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 357 - 471
Target Start/End: Original strand, 23623469 - 23623583
Alignment:
Q  357 ttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatctaaacc 456  Q
    ||||||||||||||||||||||||||||  | | ||  |||||||||| |||||| ||||  |||||| |||  |||||| |||| ||| | || ||||     
T  23623469 ttgcggtttggtttggtttggttcggtttgtcaaatgaaaaccgcaaaccaaaccaaaccatgcggttgagtaaaaaagtgatccgaatacttccaaact 23623568  T
Q  457 aagtgcgatttttta 471  Q
    || |||| |||||||    
T  23623569 aaatgcggtttttta 23623583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 355 - 385
Target Start/End: Complemental strand, 27571698 - 27571668
Alignment:
Q  355 tcttgcggtttggtttggtttggttcggttg 385  Q
    |||||||||||||||||||||||||||||||    
T  27571698 tcttgcggtttggtttggtttggttcggttg 27571668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 229; Significance: 1e-126; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 139 - 539
Target Start/End: Complemental strand, 35039811 - 35039411
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||| |    
T  35039811 aacttatatcaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaaggaaacaaattcatcactggaaatgaattaaaag 35039712  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    |||||||||||||||||||| |||  ||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||    
T  35039711 agatggaaaggaattagaattgaatttgatggtgcaacaatggaaaaatcgaatcaaaagagattattcttgggctatgtaattgggctagtacatgttt 35039612  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    |||||| |||  ||||||||||||||||||||||||||||| |||||||||||| ||||||||||| | |||| |||| |||||||||| ||||||||||    
T  35039611 aagtaacattcattattcttgcggtttggtttggtttggtttggttgttgagatgcaaaccgcaaaccgaaccaaaccgcgcggttcagcgcaaaagtca 35039512  T
Q  439 tccaaattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacacccct 538  Q
    ||| ||||||||  ||||||||||| |||||| | || | | ||| ||||  ||| |||| || ||||||| |||  ||| || |||||| |||||||||    
T  35039511 tccgaattcatccgaaccaagtgcggttttttgcagttttggtttggattggtttggtttgcggtttttctattgggttggttcggttttgaacacccct 35039412  T
Q  539 a 539  Q
    |    
T  35039411 a 35039411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 139 - 540
Target Start/End: Complemental strand, 13801850 - 13801454
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||| |||||||||| |||||||||||| || |    
T  13801850 aacttatatcaaaataggtaaaattaagaagaaacataagcatgaaataaattattgggaagtaaaggaaacaaattcatcagtggaaatgaattgaaag 13801751  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||| |||| ||||||||||||||||  ||||||||||||||||||||||  |||    
T  13801750 agatgaaaaggaattagaatcgaacctgatggtgcaacaatggaaaaattgaatcaaaagagattattcttgagctatgtaattgggctagtacatattt 13801651  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||  |||||||||||||||||||||||||||||| |||| |||||| |||||||     |||||||||||  |||||||| | |||||||||    
T  13801650 aagtaatattcattattcttgcggtttggtttggtttggttcagttgatgagatgcaaaccg-----caaaccgaaccatgcggttcaatacaaaagtca 13801556  T
Q  439 tccaaattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacacccct 538  Q
    ||| ||||||||  ||||||||||| ||||||| ||| ||||||| ||||  ||| |||| || ||||||| |||  | | || |||||| |||||||||    
T  13801555 tccgaattcatccgaaccaagtgcggttttttatggtttcgatttggattggtttggtttgcggtttttctattgggtgggttcggttttgaacacccct 13801456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 139 - 436
Target Start/End: Original strand, 33550533 - 33550830
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| |||||||  |||||||||||||||||||| | |||||||||||||||||||||||||| ||| |||||||||| | ||||||||||||| |    
T  33550533 aacttatatcaaaataattaaaattaagaagaaacatatgaatgaaacaaattattgggaagaaaaggaaacaaattcatcactagaaatgaattaaaag 33550632  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    |||| |||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||    
T  33550633 agatcgaaaggaattagaatcgaacctgatggtgcaacaatggaaaaatcgaatcaaaagagattattcttgggctatgtaattgggctagtacatgttt 33550732  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagt 436  Q
    ||||||||||  |||||||||||||||||||||||| |||||||||| |||||| ||||||||||| | |||| |||| |||||||||||||||||||    
T  33550733 aagtaatattcattattcttgcggtttggtttggttcggttcggttgctgagatgcaaaccgcaaaccgaaccaaaccgcgcggttcagtgcaaaagt 33550830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 183; E-Value: 2e-98
Query Start/End: Original strand, 143 - 513
Target Start/End: Original strand, 25137358 - 25137727
Alignment:
Q  143 tataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaaggagat 242  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||| |||||||||||| || ||||     
T  25137358 tatatcaaaataggtaaaattaagaagaaacataagcatgaaacaaattattggaaagaaaaggaaacaaattcatcactggaaatgaattgaaagagaa 25137457  T
Q  243 ggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaagt 342  Q
    ||||| |||||||||| |||| ||||||| ||| | || ||||||||||| |||||||||||||||| ||||||||||||||| ||||||| ||||||||    
T  25137458 ggaaatgaattagaattgaacctgatggtgcaatattgaaaaaatcgaatcaaaagagattattcttgggctatgtaattgggatagtacatgtttaagt 25137557  T
Q  343 aatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatcca 442  Q
    ||||||  ||||| ||| |||||||||  |||||||||||||| |||||| || ||||| || |||||| |||| ||||||||||||||||||||||||     
T  25137558 aatattcattattattgtggtttggttcagtttggttcggttgatgagatgcataccgc-aaccaaaccaaaccgcgcggttcagtgcaaaagtcatccg 25137656  T
Q  443 aattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttg 513  Q
    ||||||||  ||||||||| | |||||| |||| ||| ||| ||||  ||| |||| || |||||||||||    
T  25137657 aattcatccgaaccaagtggggttttttgcggtttcggtttggattggtttggtttgcggtttttctgttg 25137727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 142 - 441
Target Start/End: Original strand, 15859941 - 15860239
Alignment:
Q  142 ttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaaggaga 241  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||| |||||||||| |  ||||||||| || ||||    
T  15859941 ttatatcaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgagaagtaaaggaaacaaattcatcactaaaaatgaattgaaagaga 15860040  T
Q  242 tggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaag 341  Q
    | |||| |||||||||||| |  ||||||| ||||||||||||| || ||| ||||||||||||||||  |||||||||||||||||||||| ||||||     
T  15860041 tagaaaagaattagaatcggaactgatggtgcaacaatggaaaa-tctaatcaaaagagattattcttgagctatgtaattgggctagtacatgtttaat 15860139  T
Q  342 taatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatcc 441  Q
    |||||||  |||||||||| |||||||||||||||||||||||| |||| | ||||| ||||| |||| |||||| | |||||||||| |||||||||||    
T  15860140 taatattcattattcttgcagtttggtttggtttggttcggttggtgaggtgcaaactgcaaaccaaatcgaaccgcacggttcagtgtaaaagtcatcc 15860239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 139 - 441
Target Start/End: Original strand, 10591059 - 10591350
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||  ||| ||||| |||| || ||           |    
T  10591059 aacttatatcaaaataggtaaaattaagaagaaacgtaaacatgaaacaaattattgggaagtaaaagaaacaaattaatcactgaaa-----------g 10591147  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    ||||||||| ||||||||||||||| |||||||||||||||| |||||||||||  ||||| |||||||||  ||||||||||||||||| |||| ||||    
T  10591148 agatggaaatgaattagaatcgaacctgatggtacaacaatgaaaaaatcgaatcgaaagacattattcttgagctatgtaattgggctattacatgttt 10591247  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||  ||||||||||||||  |||||||||||||| ||||||||||  ||||||||||| | || |||||| |||||||||||||||||||||    
T  10591248 aagtaatattcattattcttgcggttcagtttggtttggttctgttgttgagacgcaaaccgcaaaccgaatcgaaccgcgcggttcagtgcaaaagtca 10591347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 139 - 488
Target Start/End: Complemental strand, 10390899 - 10390564
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||| |||  |||| ||| |||||||||| |||||||||||| || |    
T  10390899 aacttatatcaaaataggtaaaattaagaagaaatataagaatgaaacaaattattgagaaataaaggaaacaaattcatcactggaaatgaattgaaag 10390800  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttag-gctatgtaattgggctagtacaagtt 337  Q
    |||||||||||||||| |||||||  ||||||| ||||||||||||||| ||||  ||| ||||||||||| | |||| |||||| |||               
T  10390799 agatggaaaggaattaaaatcgaatctgatggtgcaacaatggaaaaattgaatcgaaaaagattattctttgagctacgtaatttggc----------- 10390711  T
Q  338 taagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtc 437  Q
        || ||||  ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||||    
T  10390710 ----tactattcattattcttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaatcgaaccgaaccgcgcggttcagtgcaaaagtc 10390615  T
Q  438 atccaaattcatctaaaccaagtgcgattttttacggtatcgatttagatt 488  Q
    ||   ||||||||  ||||||||||| |||||| |||| ||| ||| ||||    
T  10390614 atttgaattcatccgaaccaagtgcggttttttgcggtttcggtttggatt 10390564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 352 - 475
Target Start/End: Complemental strand, 5866742 - 5866619
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||||| |||||||||||  ||||| ||||| || |||||     
T  5866742 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagacatccgaactcatcc 5866643  T
Q  452 aaaccaagtgcgattttttacggt 475  Q
     |||||||||||||||||| ||||    
T  5866642 gaaccaagtgcgattttttgcggt 5866619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 352 - 475
Target Start/End: Original strand, 12270905 - 12271028
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||||| |||||||||||  ||||||||||| || |||||     
T  12270905 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 12271004  T
Q  452 aaaccaagtgcgattttttacggt 475  Q
     ||||||||||| |||||| ||||    
T  12271005 gaaccaagtgcggttttttgcggt 12271028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 35040239 - 35040135
Alignment:
Q  7 ccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaaataa 106  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||        ||||||||| |||||||||||||||| ||||||||||||||    
T  35040239 ccaaaccaatgcggtttggattggttcggtttgtgcggtttatcgcgagat--aaaaaatattacattgactctaatattgccaacttattacaaaataa 35040142  T
Q  107 acatagg 113  Q
    |||||||    
T  35040141 acatagg 35040135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 15859791 - 15859898
Alignment:
Q  6 accaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaaata 105  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||| || ||| ||||||    
T  15859791 accaaaccaatgcggtttggattggttcggtttgtgcggtttatcgcgagat-gaaaaaatattacattaactctaatattgccaacttgttagaaaata 15859889  T
Q  106 aacatagga 114  Q
    |||||||||    
T  15859890 aacatagga 15859898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 13802000 - 13801892
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||||||||||||||||||||||||||||||| |||||||  || |||||        ||||||||||||||||||||||||||||| |||||||    
T  13802000 caaaccaaaccaatgcggtttggattggttcggtttgagcggtttagcgtgagataaaaaaa-tattacattaactctaatattgccaatttgttacaaa 13801902  T
Q  103 ataaacatag 112  Q
    ||||||||||    
T  13801901 ataaacatag 13801892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 324 - 470
Target Start/End: Complemental strand, 10494079 - 10493933
Alignment:
Q  324 ggctagtacaagtttaagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggt 423  Q
    ||||||||||||||||||||| |    |||||||||| ||||||||||||||||||  |||| |||||| ||||| ||||| | || |||||  | ||||    
T  10494079 ggctagtacaagtttaagtaacaacgattattcttgcagtttggtttggtttggtttagttgctgagatgcaaactgcaaaccgaatcgaactacacggt 10493980  T
Q  424 tcagtgcaaaagtcatccaaattcatctaaaccaagtgcgatttttt 470  Q
    |||||||||||||||| |||||| |||  |||||||||||| |||||    
T  10493979 tcagtgcaaaagtcattcaaatttatccgaaccaagtgcgagttttt 10493933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 33550384 - 33550493
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||||||||||||||||||||| |||| |||||||||||| ||||| |||        ||||||||||||||||| |||||||| || |||||||    
T  33550384 caaaccaaaccaatgcggtttggattgattcgatttgtgcggtttatcgcgggat--aaaaaatattacattaactctaaaattgccaacttgttacaaa 33550481  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  33550482 ataaacatagga 33550493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 10494399 - 10494288
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||| |||||||||||| || |||||||||||||  |||||||| |||||||||        | ||||||||||| |||||||||||| ||||||||||    
T  10494399 caaactaaaccaatgcggcttagattggttcggttgatgcggtttatcgcgagataattttttttttacattaactataatattgccaacttattacaaa 10494300  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  10494299 ataaacatagga 10494288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 5 - 111
Target Start/End: Original strand, 10590907 - 10591016
Alignment:
Q  5 aaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat--nnnnnnnntattacattaactctaatattgccaatttat-tacaa 101  Q
    |||||||||||||||| |||||||||||||||||||||||||| || ||||||          |||||||||||||||||||||||||| |||| |||||    
T  10590907 aaccaaaccaatgcggcttggattggttcggtttgtgcggtttatcacgagataaaaaaaaaatattacattaactctaatattgccaacttatatacaa 10591006  T
Q  102 aataaacata 111  Q
    ||||||||||    
T  10591007 aataaacata 10591016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 5287932 - 5287824
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||| |||||||| ||| |||||||||||||||| ||||||||| |||| ||||         ||||||||||||||||||||||||| |||| |||||    
T  5287932 caaacgaaaccaatacggcttggattggttcggttagtgcggtttatcgcaagataaaaaaaaaattacattaactctaatattgccaacttataacaaa 5287833  T
Q  103 ataaacata 111  Q
    |||||||||    
T  5287832 ataaacata 5287824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 10391049 - 10390942
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||||||| | || |||||||||||||| ||||||||||| || ||||||        |||||||||||||||||||||||||| || |||||||    
T  10391049 caaaccaaaccaacgtggcttggattggttcggcttgtgcggtttatcacgagataaaaaaa-tattacattaactctaatattgccaacttgttacaaa 10390951  T
Q  103 ataaacata 111  Q
    |||||||||    
T  10390950 ataaacata 10390942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 25136831 - 25136941
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||||| |||| ||||||||||||||||||||||| |||| ||||        ||| |||||||||||||||||| ||| || |||||||    
T  25136831 caaaccaaaccaatgcagtttagattggttcggtttgtgcggtttatcgcaagat-ataaaaatatgacattaactctaatattgtcaacttgttacaaa 25136929  T
Q  103 ataaacatagga 114  Q
    | ||||||||||    
T  25136930 acaaacatagga 25136941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 13810887 - 13810843
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggttt 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  13810887 caaaccaaaccaatgcggtttggattggttcggtttgtgcggttt 13810843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 5874170 - 5874116
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat 57  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||||||||    
T  5874170 caaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagat 5874116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 12270611 - 12270665
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat 57  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||||||||    
T  12270611 caaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagat 12270665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 31945452 - 31945408
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggttt 47  Q
    |||||||| ||||||||||||||||||| |||| |||||||||||    
T  31945452 caaaccaatccaatgcggtttggattggatcgggttgtgcggttt 31945408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22413900 - 22413946
Alignment:
Q  1 aacaaaccaaaccaatgcggtttggattggttcggtttgtgcggttt 47  Q
    ||||||| |||||||||||||||||| ||| |||||| |||||||||    
T  22413900 aacaaacgaaaccaatgcggtttggaatggatcggttggtgcggttt 22413946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 28610677 - 28610711
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtt 37  Q
    |||||||||| ||||||||||||||||||||||||    
T  28610677 caaaccaaactaatgcggtttggattggttcggtt 28610711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 228; Significance: 1e-125; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 139 - 470
Target Start/End: Complemental strand, 6004266 - 6003935
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||| |    
T  6004266 aacttatatcaaaataggtaaaattaagaagaaatataagcatgaaacaaattattgggaagaaaaggaaacaaattcatcactggaaatgaattaaaag 6004167  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    |||||||||||||||||||| |||| ||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||    
T  6004166 agatggaaaggaattagaattgaacctgatggtgcaacaatggaaaaatcgaatcaaaagagattattcttgggctatgtaattgggctagtacatgttt 6004067  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    |||||| |||  ||||||||||||||||||||||||||||||||| | |||||| ||||||||||| | |||| ||||||||||||||||||||||||||    
T  6004066 aagtaacattcattattcttgcggtttggtttggtttggttcggtagctgagatgcaaaccgcaaaccgaaccaaacctcgcggttcagtgcaaaagtca 6003967  T
Q  439 tccaaattcatctaaaccaagtgcgatttttt 470  Q
    ||| ||||||||  ||||||||| | ||||||    
T  6003966 tccgaattcatccgaaccaagtgtggtttttt 6003935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 170; E-Value: 9e-91
Query Start/End: Original strand, 139 - 484
Target Start/End: Complemental strand, 35532030 - 35531690
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||| ||| | |||||| |  ||||||||||| || |    
T  35532030 aacttatatcaaaataggtaaaattaagaaaaaagataagcatgaaacaaattattgggaagtaaaggaaacacattcataaacggaaatgaattgaaag 35531931  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||  ||||||||||  |||||| ||||||||||||||| ||||    
T  35531930 agatggaaaggaattagaatcgaacatgatggtgcaacaatggaaaaatcgaataaaaaacgattattcttgagctatgcaattgggctagtacatgttt 35531831  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||  ||||||||||||||||||||     |||||||||| |||||| ||||| ||||||| ||| |||||  ||||||||||||||||||||    
T  35531830 aagtaatattcattattcttgcggtttggttt-----ggttcggttgctgagatgcaaactgcaaatcgaactgaaccgtgcggttcagtgcaaaagtca 35531736  T
Q  439 tccaaattcatctaaaccaagtgcgattttttacggtatcgattta 484  Q
     |  ||||||||  |||||||||| ||||||| |||| ||| ||||    
T  35531735 cctgaattcatccgaaccaagtgcaattttttgcggtttcggttta 35531690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 139 - 462
Target Start/End: Complemental strand, 21586719 - 21586402
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||  |||| ||| ||||||||||  ||||||||||| || |    
T  21586719 aacttatatcaaaataggtaaaattaagaagaaacataagcatgaaacaaattactgagaaataaaggaaacaaattcatcaccggaaatgaattgaaag 21586620  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    ||||||||||||||||||||||||| | ||||| ||||||||||||||||||||  ||||| |||||||||   |||||||||| |||||||||| ||||    
T  21586619 agatggaaaggaattagaatcgaacctcatggtgcaacaatggaaaaatcgaatcgaaagatattattcttgaactatgtaatttggctagtacatgttt 21586520  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||  ||||||||||| ||||| ||||||||||||||||| |||||| ||||| |     ||||||||||| ||||||| |||||||||||||    
T  21586519 aagtaatattcattattcttgcgatttgg-ttggtttggttcggttgctgagatgcaaactg-----caaaccgaaccgcgcggtttagtgcaaaagtca 21586426  T
Q  439 tccaaattcatctaaaccaagtgc 462  Q
    ||||||||||||  ||||||||||    
T  21586425 tccaaattcatccgaaccaagtgc 21586402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 139 - 370
Target Start/End: Complemental strand, 50562454 - 50562223
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    ||||||||  ||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||  ||| |||||||||| || |||| |||| || |    
T  50562454 aacttatattaaaatagataaaattaagaagaaacataagcatgaaacaaattatttggaagtaaatgaaacaaattcatcactgaaaataaattgaaag 50562355  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||  |||||||||||||||  |||||||||||||||||||||| ||||    
T  50562354 agatggaaaggaattagaatcgaacctgatggtgcaacaatggaaaaatcgaatcgaaagagattattcttgagctatgtaattgggctagtacatgttt 50562255  T
Q  339 aagtaatatttcttattcttgcggtttggttt 370  Q
    ||||||||||  ||||||||| ||||||||||    
T  50562254 aagtaatattcattattcttggggtttggttt 50562223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 139 - 441
Target Start/End: Original strand, 32880506 - 32880813
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattgga----------aat 228  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||| ||| |||||||||| ||||          |||    
T  32880506 aacttatatcaaaataggtaaaattaagaagaaacataagaatgaaagaaattattgggaagtaaaggaaacaaattcatcactggaaatgaatggaaat 32880605  T
Q  229 gaattaaaggagatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggcta 328  Q
    ||||| || |||||||||||||||||||||| ||| ||||||| |||||||||||||||| |||  ||||||||||  |||  ||||||||||||| |||    
T  32880606 gaattgaaagagatggaaaggaattagaatcaaacctgatggtgcaacaatggaaaaatcaaatcgaaagagattaaacttgagctatgtaattggacta 32880705  T
Q  329 gtacaagtttaagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagt 428  Q
    ||||| ||||||||||||||  || |||||||     |||||||||||||||||||| |||||| ||||||| ||| ||||||||||  |||||||||||    
T  32880706 gtacatgtttaagtaatattcatttttcttgc-----ggtttggtttggttcggttgctgagatgcaaaccgtaaaccaaaccgaactgcgcggttcagt 32880800  T
Q  429 gcaaaagtcatcc 441  Q
    |||||||||||||    
T  32880801 gcaaaagtcatcc 32880813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 140 - 381
Target Start/End: Original strand, 33002728 - 33002969
Alignment:
Q  140 acttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagga 239  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||  || |||| ||| |||| | |||  |||||| |||| || ||    
T  33002728 acttatatcaaaataggtaaagttaagaagaaacataagcatgaaacaaattattggagagtaaaggaaacaaatacttcacaggaaataaattgaaaga 33002827  T
Q  240 gatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttta 339  Q
    ||||||||||| |||||||||||| ||||||| |||||||||||||||||||| ||||||||||||| ||  ||||||||||||| || |||||  ||||    
T  33002828 gatggaaaggagttagaatcgaacctgatggtgcaacaatggaaaaatcgaatcaaaagagattattattgagctatgtaattggactggtacatattta 33002927  T
Q  340 agtaatatttcttattcttgcggtttggtttggtttggttcg 381  Q
    || ||||||  |||||||||||||||||||| ||||||||||    
T  33002928 agaaatattcattattcttgcggtttggtttagtttggttcg 33002969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 139 - 309
Target Start/End: Complemental strand, 27642041 - 27641871
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||| || |    
T  27642041 aacttatatcaaaataggtaaaatcaagaagaaacataagcatgaaacaaattattgggaagaaaaggaaataaattcatcactgaaaatgaattgaaag 27641942  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattctt 309  Q
    ||||||| |||||||||| |||||| ||||||| | |||||||||||||||||| ||||||||||||||||    
T  27641941 agatggagaggaattagattcgaacctgatggtgctacaatggaaaaatcgaatcaaaagagattattctt 27641871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 149 - 441
Target Start/End: Original strand, 43030647 - 43030919
Alignment:
Q  149 aaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaaggagatggaaag 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||| |||||||||| |||| ||||||| || |||||||||||    
T  43030647 aaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaaataaaggaaa-aaattcatcactggagatgaattgaaagagatggaaag 43030745  T
Q  249 gaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaagtaatatt 348  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||  ||| |||||||||||  ||||||||||| ||||||               ||||    
T  43030746 gaattagaatcgaacttgatggtgcaacaatggaaaaatcgaatcgaaaaagattattcttgagctatgtaatttggctag---------------tatt 43030830  T
Q  349 tcttattcttgcgg-tttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatcc 441  Q
      |||||||||||| ||||||||||||||||||||||| |||||| |||||||     ||||||||||| ||  ||| ||||||||||||||||    
T  43030831 cattattcttgcggttttggtttggtttggttcggttgctgagatgcaaaccg-----caaaccgaaccgcgtagttaagtgcaaaagtcatcc 43030919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 139 - 369
Target Start/End: Original strand, 39098148 - 39098378
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    ||||||||  |||||||||||||||||||||||| |||||||| |||||||||||||||||| |||| ||| || ||  ||| | |||||||||| || |    
T  39098148 aacttatattaaaataggtaaaattaagaagaaatataagcatcaaacaaattattgggaagtaaaggaaacaagtttgtcactcgaaatgaattgaaag 39098247  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    |||||||||| |||||||||| | | ||||||| |||||||| ||||||||| | |||| |||||||||||  ||||| |||||| | ||||||| ||||    
T  39098248 agatggaaagaaattagaatcaatcctgatggtgcaacaatgaaaaaatcgattcaaaaaagattattcttgagctatttaattgtgttagtacatgttt 39098347  T
Q  339 aagtaatatttcttattcttgcggtttggtt 369  Q
    ||||||||||  |||||||||||||| ||||    
T  39098348 aagtaatattcattattcttgcggttcggtt 39098378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 317 - 470
Target Start/End: Complemental strand, 48032836 - 48032683
Alignment:
Q  317 gtaattgggctagtacaagtttaagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacc 416  Q
    ||||||||||||||||| ||||||||||||||  | |||||||||||||||||||||||||||||| || |||||| ||||||||||| |||||||||||    
T  48032836 gtaattgggctagtacatgtttaagtaatattcatgattcttgcggtttggtttggtttggttcggctgctgagatgcaaaccgcaaaccaaaccgaacc 48032737  T
Q  417 tcgcggttcagtgcaaaagtcatccaaattcatctaaaccaagtgcgatttttt 470  Q
     ||||||||| |||||||||||||| ||||||||| ||||||||||| ||||||    
T  48032736 gcgcggttcattgcaaaagtcatccgaattcatctgaaccaagtgcggtttttt 48032683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 352 - 483
Target Start/End: Original strand, 10369610 - 10369741
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||||| |||||||||||  ||||||||||| ||||||||     
T  10369610 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaattcatcc 10369709  T
Q  452 aaaccaagtgcgattttttacggtatcgattt 483  Q
     ||||||||||| |||||| |||| |||||||    
T  10369710 gaaccaagtgcggttttttgcggtttcgattt 10369741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 6004415 - 6004307
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||        |||||||||||||||||||||||||| ||||||||||    
T  6004415 caaaccaaaccaatgcggtttggattgattcggtttgtgcggtttatcgcgagat--aaaaaatattacattaactctaatattgccaacttattacaaa 6004318  T
Q  103 ataaacatagg 113  Q
    |||||||||||    
T  6004317 ataaacatagg 6004307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 352 - 475
Target Start/End: Complemental strand, 35401894 - 35401771
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| ||||||||||||||||||||||||| ||| |||||| ||||||||||| | ||||||||| |||||||||||  ||||||||||| || |||||     
T  35401894 tatttttgcggtttggtttggtttggttcgattgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 35401795  T
Q  452 aaaccaagtgcgattttttacggt 475  Q
     ||||||||||| |||||| ||||    
T  35401794 gaaccaagtgcggttttttgcggt 35401771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 352 - 539
Target Start/End: Complemental strand, 51149392 - 51149205
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| ||||||||||||||||||||||| ||||| |||||| ||||||| ||| | ||||||||| |||||||||||  ||||||||||| || |||||     
T  51149392 tatttttgcggtttggtttggtttggttaggttgctgagatgcaaaccgtaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 51149293  T
Q  452 aaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacaccccta 539  Q
     ||||||||||| |||||| |||| ||| ||| ||||  ||  |||| || ||||||| |||  ||| || |||||| ||||||||||    
T  51149292 gaaccaagtgcggttttttgcggtttcggtttggattggttcggtttgcggtttttctattgggttggttcggttttgaacaccccta 51149205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 32880354 - 32880466
Alignment:
Q  2 acaaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaa 101  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||        |||||||||||||||||||||| ||| || ||| ||    
T  32880354 acaaaccaaaccaatacggtttgaattggttcggtttgtgcggtttatcgcgagataaaaaaaatattacattaactctaatattgtcaacttgttataa 32880453  T
Q  102 aataaacatagga 114  Q
    |||||||||||||    
T  32880454 aataaacatagga 32880466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 352 - 539
Target Start/End: Original strand, 33361312 - 33361499
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| |||||||||||||||||| |||||||||| |||||| |||||||||||   |||  |||| |||||||||||  ||||||||||| || |||||     
T  33361312 tatttttgcggtttggtttggttcggttcggttgctgagatgcaaaccgcaaactgaactaaaccgcgcggttcagtctaaaagtcatccgaactcatcc 33361411  T
Q  452 aaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacaccccta 539  Q
     ||||||||||| |||||| |||| ||| ||| ||||  ||  |||| || ||||||| |||  ||| || |||||| ||||||||||    
T  33361412 gaaccaagtgcggttttttgcggtttcggtttggattggttcggtttgcggtttttctattgggttggttcggttttgaacaccccta 33361499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 352 - 470
Target Start/End: Complemental strand, 4669317 - 4669199
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| ||||||||| ||||||||||||| ||||| |||||| |||| |||||| | ||||||||| |||||||||||  ||||||||||| || |||||     
T  4669317 tatttttgcggtttagtttggtttggtttggttgctgagatgcaaatcgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 4669218  T
Q  452 aaaccaagtgcgatttttt 470  Q
     ||||||||||| ||||||    
T  4669217 gaaccaagtgcggtttttt 4669199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 352 - 441
Target Start/End: Original strand, 34794923 - 34795012
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatcc 441  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||||| | |||||||||  |||||||||||    
T  34794923 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcacggttcagtctaaaagtcatcc 34795012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 50562593 - 50562496
Alignment:
Q  8 caaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaaataa 106  Q
    ||||||||| ||| |||||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||| ||||||||||||||    
T  50562593 caaaccaattcggcttggattggttcggtttgtgcggtttatcgcgagat-aaaaaaatattacattaactctaatattgccaacttattacaaaataa 50562496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 21586871 - 21586759
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactct-aatattgccaatttattacaa 101  Q
    |||||||||||||||| | ||||||||||||||||||||| |||| |||||||||         |||||||||||||| ||||||||||| || ||||||    
T  21586871 caaaccaaaccaatgcagcttggattggttcggtttgtgcagtttatcgcgagataaaaaaaaaattacattaactctaaatattgccaacttgttacaa 21586772  T
Q  102 aataaacatagga 114  Q
    |||||||||||||    
T  21586771 aataaacatagga 21586759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 366 - 509
Target Start/End: Complemental strand, 27641868 - 27641725
Alignment:
Q  366 ggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatctaaaccaagtgcgat 465  Q
    ||||||||||||||  || | |||||| ||||||||||| |||| | |||| |||||||||||||||||||||||  ||||||||  ||||||||||| |    
T  27641868 ggtttggtttggtttagtggctgagatgcaaaccgcaaaccaaatcaaaccacgcggttcagtgcaaaagtcatctgaattcatccgaaccaagtgcggt 27641769  T
Q  466 tttttacggtatcgatttagattaatttagtttacgatttttct 509  Q
    ||||||| || || |||| ||||  ||| |||| || |||||||    
T  27641768 tttttacagtttcaatttggattggtttggtttgcggtttttct 27641725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 7 - 111
Target Start/End: Complemental strand, 35532175 - 35532073
Alignment:
Q  7 ccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaaataa 106  Q
    |||||||||||||| |||||||| || |||||||||||||| |||||||||        |||| ||||||||||||||||||||| ||||||||||||||    
T  35532175 ccaaaccaatgcggattggattgatttggtttgtgcggtttatcgcgagataaaaaa--tatttcattaactctaatattgccaacttattacaaaataa 35532078  T
Q  107 acata 111  Q
    |||||    
T  35532077 acata 35532073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 43030486 - 43030592
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||| |||||||||        |||||||||||||  |||||||||||||| |||||||    
T  43030486 caaaccaaaccaatgcagtttgaattggttcggtttgtgtggtttatcgcgagat--aaaaaatattacattaactacaatattgccaatttgttacaaa 43030583  T
Q  103 ataaacata 111  Q
    |||||||||    
T  43030584 ataaacata 43030592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 361 - 509
Target Start/End: Complemental strand, 10481226 - 10481078
Alignment:
Q  361 ggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatctaaaccaagt 460  Q
    ||||||||||||||||||||||||| | | ||| ||||||||||||||| | ||||   ||||| |||   ||||| |||||||| |||| ||||||| |    
T  10481226 ggtttggtttggtttggttcggttgataaaataaaaaccgcaaatcaaatcaaaccatacggttgagtaataaagtgatccaaatacatccaaaccaaat 10481127  T
Q  461 gcgattttttacggtatcgatttagattaatttagtttacgatttttct 509  Q
      |||||||| | || ||||||| ||||| || ||||| ||||||||||    
T  10481126 atgattttttgcagtttcgattttgattagttcagtttgcgatttttct 10481078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 9827806 - 9827698
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||| ||| |||||||||||| ||| ||||||||| |||||||||         |||||||||||||||||||||| || ||  ||||||    
T  9827806 caaaccaaaccaatacggcttggattggttcagttggtgcggtttatcgcgagataaaaaa---attacattaactctaatattgcgaacttgatacaaa 9827710  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  9827709 ataaacatagga 9827698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 34794649 - 34794737
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaa 91  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||||||||         |||||||||||||||||||||||||    
T  34794649 caaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagataaataaaaaattacattaactctaatattgccaa 34794737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 48032877 - 48032838
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgc 42  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  48032877 caaaccaaaccaatgcggtttggattggttcagtttgtgc 48032838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 4669665 - 4669611
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat 57  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||||||||    
T  4669665 caaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagat 4669611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 10369276 - 10369330
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat 57  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||||||||    
T  10369276 caaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagat 10369330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 33361018 - 33361072
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat 57  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||||||||    
T  33361018 caaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagat 33361072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 35402228 - 35402174
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat 57  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||||||||    
T  35402228 caaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagat 35402174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 51149685 - 51149631
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat 57  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||||||||    
T  51149685 caaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagat 51149631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 8557976 - 8557932
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggttt 47  Q
    ||||||||||||||||||||||| | || ||||||||||||||||    
T  8557976 caaaccaaaccaatgcggtttgggtcggatcggtttgtgcggttt 8557932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 51191764 - 51191808
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggttt 47  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||    
T  51191764 caaaccaaaccgatgcggtttggattggttcggttgttgcggttt 51191808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 335 - 406
Target Start/End: Original strand, 55130150 - 55130221
Alignment:
Q  335 gtttaagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatc 406  Q
    |||||| |||||||| ||  | ||||||||| |||||  |||||||||||||| ||||| ||||||||||||    
T  55130150 gtttaattaatatttttttatgttgcggtttagtttgaattggttcggttgttaagataaaaaccgcaaatc 55130221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 33
Target Start/End: Original strand, 20038444 - 20038474
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttc 33  Q
    |||||||||||||||||||||||||||||||    
T  20038444 caaaccaaaccaatgcggtttggattggttc 20038474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 139 - 509
Target Start/End: Original strand, 30392290 - 30392659
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||| |||||||||| ||||||||||||||| |    
T  30392290 aacttatatcaaaataggtaaaattaagaagaatcataagcatgaaacaaattattgg-aagaaaaggaaacaaattcatcactggaaatgaattaaaag 30392388  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    ||||||||||||||||||||| ||| | || || || ||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||    
T  30392389 agatggaaaggaattagaatcaaacctcatagtgcagcaatggaaaaatcgaatcaaaagagattattgttgggctatgtaattgggctagtacatgttt 30392488  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||| |||| |||||||||||  ||||||||    
T  30392489 aagtaatattcattattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaactgaaccaaaccgcgcggttcagtaaaaaagtca 30392588  T
Q  439 tccaaattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttct 509  Q
    ||| |||||||| |||||||||||| ||||||||||| |||| ||  |||| |||| ||||||||||||||    
T  30392589 tccgaattcatccaaaccaagtgcggttttttacggtttcgaattgaattagtttaatttacgatttttct 30392659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 139 - 540
Target Start/End: Original strand, 14549437 - 14549834
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattatt-gggaagaaaagaaaataaattcatcattggaaatgaattaaag 237  Q
    ||||||||  |||||||||||||||||||||||||||||| ||||||||| ||||| |||||| |||| ||| |||||||||| || |||| |||| ||     
T  14549437 aacttatattaaaataggtaaaattaagaagaaacataagaatgaaacaatttatttgggaagtaaaggaaacaaattcatcactgaaaattaattgaaa 14549536  T
Q  238 gagatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtt 337  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||  |||||||||||||||||||||| |||    
T  14549537 gagatggaaaggaaatagaatcgaacctgatggtacaacaatggaaaattcgaatcaaaagagattattcttgagctatgtaattgggctagtacatgtt 14549636  T
Q  338 taagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtc 437  Q
    |||||||||||  |||||||| |     ||||||||||||||||| || |||||| ||||||||||| | ||||||||| ||||||||||||||||||||    
T  14549637 taagtaatattcattattcttac-----ggtttggtttggttcggatgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtgcaaaagtc 14549731  T
Q  438 atccaaattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacacccc 537  Q
    |||| ||||||||  |||||||||||||||||| |||| ||| ||| ||||  ||| ||||||  ||||||| |||  ||| || ||||||||||||| |    
T  14549732 atccgaattcatccgaaccaagtgcgattttttgcggtttcggtttggattggtttggtttacagtttttctattgggttggttcggttttaaacacctc 14549831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 139 - 470
Target Start/End: Complemental strand, 36827665 - 36827334
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||| |||||||||  ||||||| |||| || |    
T  36827665 aacttatatcaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagtaaaagaaacaaattcatcggtggaaataaattgaaag 36827566  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    |||||||||| |||||||||||||| ||||||| ||||||||||||||| ||||  |||||||||| ||||  |||||||||||||||||||||| ||||    
T  36827565 agatggaaagaaattagaatcgaacctgatggtgcaacaatggaaaaattgaatcgaaagagattaatcttgagctatgtaattgggctagtacatgttt 36827466  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||  |||||||||||||||||||||||||||||||| || |||||| ||||||||||| | |||| ||||  | ||||||||||||||||||    
T  36827465 aagtaatattcattattcttgcggtttggtttggtttggttcggctgctgagatgcaaaccgcaaaccgaaccaaaccgtgtggttcagtgcaaaagtca 36827366  T
Q  439 tccaaattcatctaaaccaagtgcgatttttt 470  Q
    | | |||||| |  ||||||||||||||||||    
T  36827365 ttcgaattcagccgaaccaagtgcgatttttt 36827334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 139 - 488
Target Start/End: Original strand, 3682129 - 3682472
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||  ||| |||||| ||| ||||| |||||| ||      
T  3682129 aacttataacaaaataggtaaaattaagaagaaacataaacatgaaacaagttattgggaagaaaatgaaacaaattcgtcagtggaa-tgaattgaaat 3682227  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    |||||| ||| ||||||||| |||| |||||||  || ||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||| ||||    
T  3682228 agatggtaagaaattagaattgaacctgatggtggaaaaatggaaaaattgaatcaaaagagattattcttaggttatgtaattgggctagtacatgttt 3682327  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    | ||||||||  ||||||||||     |||||||||||||||||||| |||||| ||||||||||| |||||| |||| |||||||||||| ||||||||    
T  3682328 aggtaatattcattattcttgc-----ggtttggtttggttcggttgctgagatgcaaaccgcaaaccaaaccaaaccgcgcggttcagtggaaaagtca 3682422  T
Q  439 tccaaattcatctaaaccaagtgcgattttttacggtatcgatttagatt 488  Q
    ||| | ||||| | ||||||||||| |||||| |||| | ||||| ||||    
T  3682423 tccgatttcatttgaaccaagtgcggttttttgcggttttgatttggatt 3682472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 139 - 440
Target Start/End: Original strand, 10661358 - 10661658
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||| ||| |||||||||||| || |    
T  10661358 aacttatatcaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagtaaaggaaacaaattcttcactggaaatgaattgaaag 10661457  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    || |||||| ||||||||||||||| |||||||||||||||| ||||||||||| |||| |||| ||||||  |||||||||| ||||||||||| ||||    
T  10661458 agttggaaatgaattagaatcgaacatgatggtacaacaatgaaaaaatcgaatcaaaaaagataattcttgagctatgtaatcgggctagtacatgttt 10661557  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    |||  |||||  |||| |||||||||||||||||||| ||| ||||| |||||| |||| |||||| |||||| |||| || ||||||||||||||||||    
T  10661558 aagatatattcattatccttgcggtttggtttggtttagtttggttgctgagatgcaaa-cgcaaaccaaaccaaaccgcgtggttcagtgcaaaagtca 10661656  T
Q  439 tc 440  Q
    ||    
T  10661657 tc 10661658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 165; E-Value: 9e-88
Query Start/End: Original strand, 139 - 539
Target Start/End: Complemental strand, 18169899 - 18169505
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||| | ||| |||| ||| |||||||||| |||||||||||| || |    
T  18169899 aacttatatcaaaataggtaaaattaaaaagaaacataagcatgaaacaaattatttgcaagtaaaggaaacaaattcatcactggaaatgaattgaaag 18169800  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    ||||||||||||||||||||| ||| ||||||| ||| ||||||||||||||||  | |||||||||||||  | |||||||||||||||||||| ||||    
T  18169799 agatggaaaggaattagaatcaaacctgatggtgcaataatggaaaaatcgaatcgatagagattattcttgaggtatgtaattgggctagtacatgttt 18169700  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||  ||||||||||      ||||| |||||||||| ||  ||||| ||||||||||| ||||||||||| ||||||||||||||||||| |    
T  18169699 aagtaatattcattattcttgc-----agtttgatttggttcggctgccgagatgcaaaccgcaaaccaaaccgaaccacgcggttcagtgcaaaagtaa 18169605  T
Q  439 tccaaattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacacccct 538  Q
    ||| || |||||  |||||| ||||||||||| || | ||| ||| ||||  ||| |||| |||||||| | ||   ||| ||||||||| |||||||||    
T  18169604 tccgaa-tcatccgaaccaactgcgattttttgcgttttcggtttggattggttttgtttgcgatttttttatttggttggtttggttttgaacacccct 18169506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 165; E-Value: 9e-88
Query Start/End: Original strand, 139 - 539
Target Start/End: Complemental strand, 18633465 - 18633071
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||| | ||| |||| ||| |||||||||| |||||||||||| || |    
T  18633465 aacttatatcaaaataggtaaaattaaaaagaaacataagcatgaaacaaattatttgcaagtaaaggaaacaaattcatcactggaaatgaattgaaag 18633366  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    ||||||||||||||||||||| ||| ||||||| ||| ||||||||||||||||  | |||||||||||||  | |||||||||||||||||||| ||||    
T  18633365 agatggaaaggaattagaatcaaacctgatggtgcaataatggaaaaatcgaatcgatagagattattcttgaggtatgtaattgggctagtacatgttt 18633266  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||  ||||||||||      ||||| |||||||||| ||  ||||| ||||||||||| ||||||||||| ||||||||||||||||||| |    
T  18633265 aagtaatattcattattcttgc-----agtttgatttggttcggctgccgagatgcaaaccgcaaaccaaaccgaaccacgcggttcagtgcaaaagtaa 18633171  T
Q  439 tccaaattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacacccct 538  Q
    ||| || |||||  |||||| ||||||||||| || | ||| ||| ||||  ||| |||| |||||||| | ||   ||| ||||||||| |||||||||    
T  18633170 tccgaa-tcatccgaaccaactgcgattttttgcgttttcggtttggattggttttgtttgcgatttttttatttggttggtttggttttgaacacccct 18633072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 139 - 463
Target Start/End: Original strand, 33068807 - 33069121
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||| | |||||||  |||||||||||||||| ||     ||||||||||||||||||||||||| |||||||||||||| || ||||||||| ||||    
T  33068807 aacttaaatcaaaatatttaaaattaagaagaaaaat-----tgaaacaaattattgggaagaaaaggaaataaattcatcactgaaaatgaattgaagg 33068901  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    | ||| ||||||||||||||||||  ||||||| |||||||||||||||| ||| ||||||||||||||||  | |||||||||||||| |||||| |||    
T  33068902 aaatgaaaaggaattagaatcgaatttgatggtgcaacaatggaaaaatcaaatcaaaagagattattcttgagttatgtaattgggctggtacaaattt 33069001  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||  ||||| ||| |||||||||| |||||||||||||| | |||| |||||||||||||||||||     || ||||||||||||||||||    
T  33069002 aagtaatattgattatttttgtggtttggtttcgtttggttcggttgctaagatgcaaaccgcaaatcaaaccg-----cgtggttcagtgcaaaagtca 33069096  T
Q  439 tccaaattcatctaaaccaagtgcg 463  Q
    ||| || ||||| ||||||||||||    
T  33069097 tccgaaatcatccaaaccaagtgcg 33069121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 143 - 450
Target Start/End: Complemental strand, 36910201 - 36909910
Alignment:
Q  143 tataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaaggagat 242  Q
    |||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||  | ||||||||| || |||||    
T  36910201 tatatcaaaatatgtaaaattaagaagaaacataatcatgaaacaaattattgggaagtaaaggaaataaattcatcaccgaaaatgaattgaaagagat 36910102  T
Q  243 ggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaagt 342  Q
    ||||| ||||||||||| ||| ||||||| ||||||||||||||| |||| |||| |||||||||||  || |||||||||||||||||||             
T  36910101 ggaaatgaattagaatcaaacctgatggtgcaacaatggaaaaatggaatcaaaa-agattattcttgagc-atgtaattgggctagtaca--------- 36910013  T
Q  343 aatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatcca 442  Q
     |||||  ||||||||||     |||||||| ||||||||||  |||||| ||||||||||| | ||||||||| ||| ||||| |||||||||| || |    
T  36910012 tatattcattattcttgc-----ggtttggtatggttcggttcctgagatgcaaaccgcaaaccgaaccgaaccgcgcagttcaatgcaaaagtcgtcta 36909918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 314 - 470
Target Start/End: Original strand, 44673109 - 44673265
Alignment:
Q  314 tatgtaattgggctagtacaagtttaagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccga 413  Q
    |||||||||||||||||||| ||||||||||||||  |||||||||| |||||||||||||||||||||||| |||||| ||||||||||| ||||||||    
T  44673109 tatgtaattgggctagtacatgtttaagtaatattcattattcttgcagtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccaaaccga 44673208  T
Q  414 acctcgcggttcagtgcaaaagtcatccaaattcatctaaaccaagtgcgatttttt 470  Q
    ||| |||||||||||||||||||||||| ||||||||  |||||||| || ||||||    
T  44673209 accgcgcggttcagtgcaaaagtcatccgaattcatccgaaccaagtacggtttttt 44673265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 273 - 493
Target Start/End: Complemental strand, 6200675 - 6200455
Alignment:
Q  273 caacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaagtaatatttcttattcttgcggtttggtttgg 372  Q
    |||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||| |||| |||||||||  ||||||||||||||||||||||    
T  6200675 caacaatggaaaaatcgaatcaaaagagattattcttgggttatgtaattgggctagtacatgtttcagtaatattcattattcttgcggtttggtttgg 6200576  T
Q  373 tttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatctaaaccaagtgcgattttttac 472  Q
    ||||||| ||||| | |||| ||||||  ||| | |||  |||| | || ||||||||||||||||||| ||||||||  |||||| |||  |||||| |    
T  6200575 tttggtttggttgctaagatgcaaaccaaaaaccgaacgaaaccgcacgattcagtgcaaaagtcatccgaattcatccgaaccaaatgcagttttttgc 6200476  T
Q  473 ggtatcgatttagattaattt 493  Q
    ||| ||||||| |||| ||||    
T  6200475 ggtttcgatttggattgattt 6200455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 3 - 231
Target Start/End: Original strand, 44672843 - 44673073
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||||||||||||||||||||| |||||| ||||| |||||||||        |||||||||||||||||||||||||| || || ||||    
T  44672843 caaaccaaaccaatgcggtttggattggttcgatttgtgtggtttatcgcgagatgaaaaaa-tattacattaactctaatattgccaacttgttgcaaa 44672941  T
Q  103 ataaacataggagttctaaccagattaaa-atcaaacaa--cttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaa 199  Q
    ||||||||| ||  | | |   ||| | | || | | ||  |||||| |||||||||||||||||||||||||||||||| |||||||||||| | ||||    
T  44672942 ataaacataagatattttatatgataatatattagataaaacttatatcaaaataggtaaaattaagaagaaacataagcctgaaacaaattacttggaa 44673041  T
Q  200 gaaaagaaaataaattcatcattggaaatgaa 231  Q
    | |||||||| |||||||||| || |||||||    
T  44673042 gtaaagaaaacaaattcatcactgaaaatgaa 44673073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 14549288 - 14549397
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||| || |||||||    
T  14549288 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttatcgcgagat--aaaaaatattacattaactctaatattgccaacttgttacaaa 14549385  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  14549386 ataaacatagga 14549397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 10661208 - 10661318
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||||||||||| |||||||||||||||||| ||| |||||||||        ||||||||||||| |||||||||||| || |||||||    
T  10661208 caaaccaaaccaatgcggtttgtattggttcggtttgtgcgatttatcgcgagat-aaaaaaatattacattaactgtaatattgccaacttgttacaaa 10661306  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  10661307 ataaacatagga 10661318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 18170048 - 18169939
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat-nnnnnnnntattacattaactctaatattgccaatttattacaa 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||          ||||||||||||||||| ||||| | || ||||||    
T  18170048 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttatcgcgagataaaaaaaaaaattacattaactctaatgttgcctacttgttacaa 18169949  T
Q  102 aataaacata 111  Q
    ||||||||||    
T  18169948 aataaacata 18169939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 36910359 - 36910252
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||||||| |||| ||||||||||||||||||||| |||| |||||||||        |||||||||||||||||||||||||| || |||||||    
T  36910359 caaaccaaaccaa-gcggcttggattggttcggtttgtgcagtttatcgcgagattaaaaaaatattacattaactctaatattgccaacttgttacaaa 36910261  T
Q  103 ataaacata 111  Q
    ||| |||||    
T  36910260 atagacata 36910252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 6200870 - 6200760
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||| |||||||||||||||||||||||| |||||| ||| |||| ||||        |||||||||||||||||||||||||| || || ||||    
T  6200870 caaaccaaagcaatgcggtttggattggttcggtatgtgcgctttatcgcaagataaaaaaa-tattacattaactctaatattgccaacttgtttcaaa 6200772  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  6200771 ataaacatagga 6200760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 366 - 463
Target Start/End: Complemental strand, 5802602 - 5802505
Alignment:
Q  366 ggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatctaaaccaagtgcg 463  Q
    |||||||||||||| ||||| |||||| ||||||||||| | ||||||||| |||||||||||  ||||||||||  || |||||  |||||||||||    
T  5802602 ggtttggtttggtttggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatctgaactcatccgaaccaagtgcg 5802505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 18633609 - 18633505
Alignment:
Q  9 aaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat--nnnnnnnntattacattaactctaatattgccaatttattacaaaataa 106  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||           ||||||||||||||||| ||||| | || |||||||||||    
T  18633609 aaaccaatgcggtttggattggttcggtttgtgcggtttatcgcgagataaaaaaaaaaaattacattaactctaatgttgcctacttgttacaaaataa 18633510  T
Q  107 acata 111  Q
    |||||    
T  18633509 acata 18633505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 15 - 112
Target Start/End: Original strand, 30392152 - 30392248
Alignment:
Q  15 atgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaaataaacatag 112  Q
    ||||||||||| |||||| || ||||||||||| |||||||||        |||||||||||||||||||||||||| || |||||||||||||||||    
T  30392152 atgcggtttggtttggtttggcttgtgcggtttatcgcgagataaaaaaa-tattacattaactctaatattgccaacttgttacaaaataaacatag 30392248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 361 - 463
Target Start/End: Complemental strand, 3006283 - 3006186
Alignment:
Q  361 ggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatctaaaccaagt 460  Q
    ||||||||||||||||||||||||| |||||| |||||||     ||||||||||| |||||||||||  |||||| |||| || |||||  ||||||||    
T  3006283 ggtttggtttggtttggttcggttgctgagatgcaaaccg-----caaaccgaaccgcgcggttcagtctaaaagtaatccgaactcatccgaaccaagt 3006189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 3681982 - 3682087
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||| |||||||||||| ||||||||||||| |||||||||||| ||||||||          |||||||||||| |||||||| ||| || |||||||    
T  3681982 caaactaaaccaatgcggcttggattggttcgatttgtgcggtttatcgcgaga----aaaaaaattacattaactttaatattgtcaacttgttacaaa 3682077  T
Q  103 ataaacatag 112  Q
    ||||||||||    
T  3682078 ataaacatag 3682087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 366 - 450
Target Start/End: Complemental strand, 42496546 - 42496462
Alignment:
Q  366 ggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatc 450  Q
    |||||| ||||||||| ||||| ||||| ||| | |||||| |||||||||  |||||||||||||||| |||| ||||||||||    
T  42496546 ggtttgatttggttcgattgttaagatataaatcacaaatcgaaccgaaccgtgcggttcagtgcaaaaatcattcaaattcatc 42496462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 36827753 - 36827705
Alignment:
Q  66 tattacattaactctaatattgccaatttattacaaaataaacatagga 114  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||||    
T  36827753 tattacattaactctaatattgccaacttgctacaaaataaacatagga 36827705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 6200709 - 6200670
Alignment:
Q  149 aaaataggtaaaattaagaagaaacataagcatgaaacaa 188  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  6200709 aaaataggtaaaattaagaagaaacataagcatgcaacaa 6200670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 3006590 - 3006536
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat 57  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||||||||    
T  3006590 caaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagat 3006536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 5803264 - 5803210
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat 57  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||||||||    
T  5803264 caaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagat 5803210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 33068379 - 33068420
Alignment:
Q  66 tattacattaactctaatattgccaatttattacaaaataaa 107  Q
    |||||||||||||||||||||||||| ||||||||| |||||    
T  33068379 tattacattaactctaatattgccaacttattacaagataaa 33068420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 9012860 - 9012816
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggttt 47  Q
    ||||||||||||||||||||||| |||| |||||| |||||||||    
T  9012860 caaaccaaaccaatgcggtttgggttggatcggttggtgcggttt 9012816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 361 - 404
Target Start/End: Original strand, 19539686 - 19539729
Alignment:
Q  361 ggtttggtttggtttggttcggttgttgagatacaaaccgcaaa 404  Q
    ||||||||||||||||||||||||| | ||||| ||||||||||    
T  19539686 ggtttggtttggtttggttcggttgataagataaaaaccgcaaa 19539729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 40436498 - 40436540
Alignment:
Q  5 aaccaaaccaatgcggtttggattggttcggtttgtgcggttt 47  Q
    ||||||||||||||||||||| |||| |||||| |||||||||    
T  40436498 aaccaaaccaatgcggtttgggttggatcggttggtgcggttt 40436540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 38926452 - 38926415
Alignment:
Q  5 aaccaaaccaatgcggtttggattggttcggtttgtgc 42  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  38926452 aaccaaaccaatgtggtttggattggttcggttggtgc 38926415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 223; Significance: 1e-122; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 142 - 540
Target Start/End: Original strand, 48996292 - 48996690
Alignment:
Q  142 ttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaaggaga 241  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||  ||| ||||| |||| || |||| |||| || |||     
T  48996292 ttatatcaaaataggtaaaattaagaagaaacataagtatgaaacaaattattgagaagaaaatgaaacaaatttatcactgaaaataaattgaaagagg 48996391  T
Q  242 tggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaag 341  Q
    |||||||||||||||||||||  ||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||    
T  48996392 tggaaaggaattagaatcgaatttgatggtgcaacaatgaaaaaatcgaatcaaaagagattattcttaggctatgtaattaggctagtacatgtttaag 48996491  T
Q  342 taatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatcc 441  Q
    |||||||  ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  48996492 taatattcattattcttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaatcaaaccgaaccgcgcggttcattgcaaaagtcatcc 48996591  T
Q  442 aaattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacacccctaa 540  Q
     |||| |||  |||||||||||||||||| |||| ||||||| ||||  ||| |||| |  ||||||| |||  ||| ||||||||| |||||||||||    
T  48996592 gaattgatccgaaccaagtgcgattttttgcggtttcgatttggattggtttggtttgcagtttttctattgggttggtttggttttgaacacccctaa 48996690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 139 - 470
Target Start/End: Complemental strand, 40899957 - 40899626
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||| ||| |||| |||||||||||||| |||||||||||| || |    
T  40899957 aacttatatcaaaataggtaaaattaagaagaaatataagcatgaatcaaattattggtaagtaaaggaaataaattcatcactggaaatgaatttaaag 40899858  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    |||||||||||||||||||| |||  ||||||| |||||||||||||||||||| |||||||||||| ||| |||||||||||||||||| |||| ||||    
T  40899857 agatggaaaggaattagaattgaatttgatggtgcaacaatggaaaaatcgaatcaaaagagattatccttgggctatgtaattgggctattacatgttt 40899758  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    |||||| |||  ||||||||||||||||||||||||||||||||||| |||||| ||||||||||| | |||| |||| |||||||||| ||||||||||    
T  40899757 aagtaacattcattattcttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccaaaccgcgcggttcagcgcaaaagtca 40899658  T
Q  439 tccaaattcatctaaaccaagtgcgatttttt 470  Q
    ||| ||||||||  ||||||||||||||||||    
T  40899657 tccgaattcatccgaaccaagtgcgatttttt 40899626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 139 - 540
Target Start/End: Original strand, 32136902 - 32137306
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||| |||||||||| | |||||||||| || |    
T  32136902 aacttatataaaaataggtaaaattaagaagaaacataagcatgaaacaaatgattgggaagtaaaggaaacaaattcatcacttgaaatgaattgaaag 32137001  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    |||||||||||||||| |||||||| ||||||| |||||||| ||||||||||| |||||| |||||||||| |||||||||||||||||||||| ||||    
T  32137002 agatggaaaggaattaaaatcgaacctgatggtgcaacaatgaaaaaatcgaataaaaagaaattattcttaagctatgtaattgggctagtacatgttt 32137101  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||  | ||||||| ||||||||||| ||||||||||||| |||||| ||||||||||| ||||||||||| | ||||||| |||||||||||    
T  32137102 aagtaatattcatcattcttgtggtttggtttgatttggttcggttgctgagatgcaaaccgcaaaccaaaccgaaccgcacggttcattgcaaaagtca 32137201  T
Q  439 tc---caaattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacacc 535  Q
    ||    |||||||||  || ||||||||||||||| |||| ||| ||| ||||  ||| |||| || ||||||| |||  ||| || |||||| |||||     
T  32137202 tctgaaaaattcatccgaatcaagtgcgattttttgcggtttcggtttggattggtttggtttgcggtttttctattgggttggttcggttttgaacact 32137301  T
Q  536 cctaa 540  Q
    |||||    
T  32137302 cctaa 32137306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 139 - 539
Target Start/End: Complemental strand, 30193853 - 30193453
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||| || ||||||||| || |    
T  30193853 aacttatatcaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagtaaaggaaacaaattcatcactgtaaatgaattgaaag 30193754  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    |||||||||||||||| |||||||| ||||||| |||||||||||||||||||| |||||| |||||||||  |||||||||||||| || ||||  |||    
T  30193753 agatggaaaggaattaaaatcgaacctgatggtgcaacaatggaaaaatcgaatcaaaagaaattattcttgagctatgtaattgggataatacatattt 30193654  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||  ||||||||||||| ||||||||||||||||||||| |||||| ||||| |||||   ||||||||| | ||||||| |||||||||||    
T  30193653 aagtaatattcattattcttgcggtatggtttggtttggttcggttgctgagatgcaaactgcaaactgaaccgaaccgcacggttcattgcaaaagtca 30193554  T
Q  439 tccaaattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacacccct 538  Q
    | | ||||||||  || || ||||| ||||||||||| ||| ||| ||||  ||| |||| |  ||||||| |||| ||| || |||||| |||||||||    
T  30193553 tacgaattcatccgaatcatgtgcggttttttacggtttcggtttggattggtttggtttgcagtttttctattgagttggttcggttttgaacacccct 30193454  T
Q  539 a 539  Q
    |    
T  30193453 a 30193453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 141 - 488
Target Start/End: Complemental strand, 8176473 - 8176136
Alignment:
Q  141 cttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaaggag 240  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||| | || |||||||||||| |||    
T  8176473 cttatatcaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaaagaaaaaaattcataactgaaaatgaattaaaagag 8176374  T
Q  241 atggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaa 340  Q
    ||||||||||||||| ||||||| ||||||| |||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||||    
T  8176373 atggaaaggaattaggatcgaacctgatggtgcaacaatggaaaaatcgaatcaaaagagattatttttgggctatgtaattgggctagtacatgtttaa 8176274  T
Q  341 gtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatc 440  Q
    ||||| ||  ||||||||||||||||||||          ||||| |||||| ||||||||||||| ||||||||  ||||||||||||||||||||||     
T  8176273 gtaatcttcattattcttgcggtttggttt----------ggttgctgagatgcaaaccgcaaatcgaaccgaacgacgcggttcagtgcaaaagtcatt 8176184  T
Q  441 caaattcatctaaaccaagtgcgattttttacggtatcgatttagatt 488  Q
    | | ||||||  ||||||||||| |||||| |||| ||||||| ||||    
T  8176183 cgagttcatccgaaccaagtgcggttttttgcggtttcgatttggatt 8176136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 172; E-Value: 6e-92
Query Start/End: Original strand, 142 - 440
Target Start/End: Original strand, 6333529 - 6333832
Alignment:
Q  142 ttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaaggaga 241  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||| |||||||||||| || ||||    
T  6333529 ttatatcaaaatatgtaaaattaagaagaaacataagcatgaaacaaattattgggaagtaaaggaaacaaattcatcactggaaatgaattgaaagaga 6333628  T
Q  242 tggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaag 341  Q
    |||||| ||||||||||||||| ||||||| |||| |||||||||| |||| ||||||||||||||||  ||||||||||||||||||||||  ||||||    
T  6333629 tggaaatgaattagaatcgaacctgatggtgcaacgatggaaaaattgaatcaaaagagattattcttgagctatgtaattgggctagtacatatttaag 6333728  T
Q  342 taatatttcttattcttgcg-----gtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagt 436  Q
    |||||||  |||||||||||     |||||||||||||||||||||||| | |||| ||| ||||||||| ||||||| | |||||||||||| ||||||    
T  6333729 taatattcattattcttgcggtttagtttggtttggtttggttcggttgctaagatgcaagccgcaaatcgaaccgaatcgcgcggttcagtgtaaaagt 6333828  T
Q  437 catc 440  Q
    ||||    
T  6333829 catc 6333832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 169; E-Value: 4e-90
Query Start/End: Original strand, 139 - 441
Target Start/End: Complemental strand, 40806690 - 40806396
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||| ||| ||||| ||||||||||||||||| || |    
T  40806690 aacttatatcaaaataggtaaagttaagaagaaacataagcatgaaacaaattattggaaagtaaaggaaacaaatttatcattggaaatgaattgaaag 40806591  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    ||||||||||||||||||||||||| || ||   |||||||| ||||||||||| ||||||||||||||||  |||||||||||| |||||||||  |||    
T  40806590 agatggaaaggaattagaatcgaacctgttg---caacaatgaaaaaatcgaatcaaaagagattattcttgagctatgtaattgagctagtacatattt 40806494  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||  |||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||      ||||||||||| ||||||||    
T  40806493 aagtaatattcattattcttgcggtttggtttggtttggttcagttgctgagatgcaaaccgcaaatcaaaccg-----tgcggttcagtgtaaaagtca 40806399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 139 - 539
Target Start/End: Original strand, 10218893 - 10219283
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||  ||| |||||||||| || ||||||||| || |    
T  10218893 aacttatatcaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgagaagtaaaagaaacaaattcatcactgaaaatgaattgaaag 10218992  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    |||||||||||||||||||||||||  |||||| |||||||||||||||| ||| ||| ||||||||||||  |||||||||||||||||||||| ||||    
T  10218993 agatggaaaggaattagaatcgaaccagatggtgcaacaatggaaaaatctaatcaaatgagattattcttgagctatgtaattgggctagtacatgttt 10219092  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||  ||||||||||||||||||||          |||  ||||||| ||||||||||| ||||||||||| |||||||||||| ||||||||    
T  10219093 aagtaatattcattattcttgcggtttggttt----------ggtacttgagatgcaaaccgcaaaccaaaccgaaccgcgcggttcagtgtaaaagtca 10219182  T
Q  439 tccaaattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacacccct 538  Q
    ||| | |||||   ||||||||||  |||||| |||| ||| ||| ||||  ||| |||| || ||||||| |||  ||  || |||||| |||||||||    
T  10219183 tccgagttcattcgaaccaagtgcagttttttgcggtttcggtttggattggtttggtttgcggtttttctattgggttcgttcggttttgaacacccct 10219282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 118 - 539
Target Start/End: Original strand, 31301586 - 31301999
Alignment:
Q  118 ctaaccagattaaaatcaaacaa--cttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaatt 215  Q
    |||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||    
T  31301586 ctaaccagattaaaatcaaacaaaacttatatcaaaataggtaaaattaagaagaaacataagcatgaaacaaattattggaaagaaaaggaaacaaatt 31301685  T
Q  216 catcattggaaatgaattaaaggagatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaat-taaaagagattattcttaggct 314  Q
    ||||| |||||||||||| ||||||||||||| ||||||||||||||  ||||||| |||||||| |||| ||||||  |||| | |||||||||  | |    
T  31301686 catcactggaaatgaattgaaggagatggaaatgaattagaatcgaaactgatggtgcaacaatgaaaaagtcgaataaaaaaaaaattattcttgagtt 31301785  T
Q  315 atgtaattgggctagtacaagtttaagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaa 414  Q
    |||||||||||||| |||||||||||||||||||  ||||||||||          ||||||||||||||| |||||| ||||||||||| | ||| |||    
T  31301786 atgtaattgggctaatacaagtttaagtaatattgattattcttgc----------ggtttggttcggttgctgagatgcaaaccgcaaaccgaactgaa 31301875  T
Q  415 cctcgcggttcagtgcaaaagtcatccaaattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttga 514  Q
    ||  | ||||||||| ||||||||||  ||||||||  ||||||||||| |||||| | || ||| | | ||||  ||| |||| || ||||||| |||     
T  31301876 ccatgtggttcagtg-aaaagtcatctgaattcatccgaaccaagtgcggttttttgcagtttcggtctggattggtttggtttgcggtttttctattgg 31301974  T
Q  515 cttgatttggttttaaacaccccta 539  Q
     ||| || |||||| ||||||||||    
T  31301975 gttggttcggttttgaacaccccta 31301999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 141 - 404
Target Start/End: Complemental strand, 23937393 - 23937130
Alignment:
Q  141 cttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaaggag 240  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||  ||| |||||||||| | |||||||||| || |||    
T  23937393 cttatatcaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaaataaatgaaacaaattcatcactagaaatgaattgaaagag 23937294  T
Q  241 atggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaa 340  Q
    |||||||||||||||||| |||| ||||||| |||||||||||||||| |||  |||||||||||||||  | ||||||||||| |||||| | ||||||    
T  23937293 atggaaaggaattagaatagaacatgatggtgcaacaatggaaaaatcaaatctaaagagattattcttgagttatgtaattggactagtatatgtttaa 23937194  T
Q  341 gtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaa 404  Q
    ||||||||| ||||||||||||||| |||||||||||||| ||||||||||| |||||| ||||    
T  23937193 gtaatatttattattcttgcggtttagtttggtttggttcagttgttgagatgcaaaccacaaa 23937130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 153 - 438
Target Start/End: Original strand, 52344932 - 52345216
Alignment:
Q  153 taggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaaggagatggaaaggaat 252  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||| |||||||||| || | ||||||| || ||| ||||||  | |    
T  52344932 taggtaaaattaagaagaaacataagcatgaaacaaattattggaaagtaaaggaaacaaattcatcagtgaatatgaattgaaagagttggaaataagt 52345031  T
Q  253 tagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaagtaatatttctt 352  Q
    ||||||||||| ||||| | ||| |||||||||||| ||| ||||| || |||||||  |||||| ||| || |||||||| ||||||||||||||  ||    
T  52345032 tagaatcgaacctgatg-tgcaataatggaaaaatcaaatcaaaagcgactattcttgagctatgcaatcggactagtacatgtttaagtaatattcatt 52345130  T
Q  353 attcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||| | |||||||||  ||||||||||||||||||||    
T  52345131 attcttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtca 52345216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 153 - 392
Target Start/End: Original strand, 43630775 - 43630996
Alignment:
Q  153 taggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaaggagatggaaaggaat 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||| || ||||||||| || |||||||||||||||    
T  43630775 taggtaaaattaagaagaaacataagcatgaaacaaattattgggaagtaaaggaaacaaattcatcactgcaaatgaattgaaagagatggaaaggaat 43630874  T
Q  253 tagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaagtaatatttctt 352  Q
    ||||||||||| | ||||| |||||||| ||||                  ||||||  |||||||| |||||||| ||||  |||||||||||||  ||    
T  43630875 tagaatcgaacttaatggtgcaacaatgaaaaa------------------attcttgagctatgtagttgggctattacatttttaagtaatattcatt 43630956  T
Q  353 attcttgcggtttggtttggtttggttcggttgttgagat 392  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  43630957 attcttgcggtttggtttggtttggttcggttgctgagat 43630996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 336 - 475
Target Start/End: Complemental strand, 26477869 - 26477730
Alignment:
Q  336 tttaagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaag 435  Q
    |||||||||||||  ||||||||| || |||||||||||||||||||||| |||||| ||||||||||| ||||||||||| | ||||| ||| ||||||    
T  26477869 tttaagtaatattcattattcttgtggattggtttggtttggttcggttgctgagatgcaaaccgcaaaccaaaccgaaccgcacggtttagtacaaaag 26477770  T
Q  436 tcatccaaattcatctaaaccaagtgcgattttttacggt 475  Q
    |||||| ||||||||  ||||||||||| |||||||||||    
T  26477769 tcatccgaattcatccgaaccaagtgcggttttttacggt 26477730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 198 - 302
Target Start/End: Original strand, 29639724 - 29639828
Alignment:
Q  198 aagaaaagaaaataaattcatcattggaaatgaattaaaggagatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaa 297  Q
    |||||||  ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||     
T  29639724 aagaaaatgaaacaaattcatcattggaaatgaattgaaggagatggaaaggaattagaatcgaacctgatgatgcaacaatggaaaaatcgaattaaag 29639823  T
Q  298 gagat 302  Q
    |||||    
T  29639824 gagat 29639828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 352 - 544
Target Start/End: Complemental strand, 50570682 - 50570490
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||||| |||||||||||  ||||||||||| || |||||     
T  50570682 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 50570583  T
Q  452 aaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacacccctaaaaac 544  Q
     ||||||||||| |||||| |||| ||| ||| ||||  ||  |||| || ||||||| |||  ||| || |||||| |||||||||| ||||    
T  50570582 gaaccaagtgcggttttttgcggtttcggtttggattggttcggtttgcggtttttctattgggttggttcggttttgaacacccctagaaac 50570490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 40900106 - 40899998
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||        |||||||||||||||||||||||||| ||||||||||    
T  40900106 caaaccaaaccaatgcggtttggattggtttggtttgtgcggtttatcgcgagat--aaaaaatattacattaactctaatattgccaacttattacaaa 40900009  T
Q  103 ataaacatagg 113  Q
    |||||||||||    
T  40900008 ataaacatagg 40899998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 352 - 540
Target Start/End: Original strand, 29639994 - 29640182
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||||| |||||||||||  ||||||||||| || |||||     
T  29639994 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 29640093  T
Q  452 aaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacacccctaa 540  Q
     ||||||||||| |||||| |||| ||| ||| | ||  ||  |||| || ||||||| |||  ||| || |||||| |||||||||||    
T  29640094 gaaccaagtgcggttttttgcggtttcggtttgggttggttcggtttgcggtttttctattgggttggttcggttttgaacacccctaa 29640182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 352 - 539
Target Start/End: Original strand, 42558082 - 42558269
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||||| | |||||||||  ||||||||||| || |||||     
T  42558082 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcacggttcagtctaaaagtcatccgaactcatcc 42558181  T
Q  452 aaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacaccccta 539  Q
     ||||||||||| |||||| |||| ||| ||| ||||  ||  |||| || ||||||| |||  ||| || |||||| ||||||||||    
T  42558182 gaaccaagtgcggttttttgcggtttcggtttggattggttcggtttgcggtttttctattgggttggttcggttttgaacaccccta 42558269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 10218743 - 10218853
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||        |||||||||||||||||||||||||| || |||||||    
T  10218743 caaaccaaaccaatgcggtttggattggttcggtttgtacggtttatcgcgagat-gaaaaaatattacattaactctaatattgccaacttgttacaaa 10218841  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  10218842 ataaacatagga 10218853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 30194003 - 30193893
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||||||        |||||||||||||||||||||||||| || |||||||    
T  30194003 caaaccaaaccaatgcggtttggattggttcggtttatgcggtttatcgcgagat-aaaaaaatattacattaactctaatattgccaacttgttacaaa 30193905  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  30193904 ataaacatagga 30193893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 351 - 488
Target Start/End: Complemental strand, 5261516 - 5261379
Alignment:
Q  351 ttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatc 450  Q
    |||||||||| |||||||||| ||||||||| ||  |||||| ||||||||||| | ||||||||| |||||||||||||||||||||||  ||||||||    
T  5261516 ttattcttgcagtttggtttgatttggttcgatttctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtgcaaaagtcatctgaattcatc 5261417  T
Q  451 taaaccaagtgcgattttttacggtatcgatttagatt 488  Q
      || ||||||||||||||| |||| ||| ||| ||||    
T  5261416 cgaatcaagtgcgattttttgcggtttcggtttggatt 5261379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 6333376 - 6333486
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||         |||||||||||||||||||| |||| || |||||||    
T  6333376 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttatcgcgagataaaaaaaa-attacattaactctaatattaccaacttgttacaaa 6333474  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  6333475 ataaacatagga 6333486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 23937546 - 23937435
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||||| | |||||||||||||||||||||||||| | |||||||        ||||||||||||||||||||||| || || |||||||    
T  23937546 caaaccaaaccaatgcagcttggattggttcggtttgtgcggtttattgcgagattaaaaaaatattacattaactctaatattgcaaacttgttacaaa 23937447  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  23937446 ataaacatagga 23937435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 40806841 - 40806730
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||||| |||||||||||||||||||||||||||| || ||||||        |||||||||||||||||||||| ||| || ||||| |    
T  40806841 caaaccaaaccaatgcagtttggattggttcggtttgtgcggtttatcacgagataaaaaaaatattacattaactctaatattgtcaacttgttacata 40806742  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  40806741 ataaacatagga 40806730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 32136752 - 32136862
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||        |||||||||||||||||||||| ||| || | |||||    
T  32136752 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttatcgtgagat-aaaaaaatattacattaactctaatattgtcaacttgtaacaaa 32136850  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  32136851 ataaacatagga 32136862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 352 - 470
Target Start/End: Original strand, 36078683 - 36078801
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||| |||||   ||||||||| |||||||||||  ||||||||||| || |||||     
T  36078683 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaactgcaaactgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 36078782  T
Q  452 aaaccaagtgcgatttttt 470  Q
     ||||||||||| ||||||    
T  36078783 gaaccaagtgcggtttttt 36078801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 352 - 475
Target Start/End: Complemental strand, 29643431 - 29643308
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||| || |||| | ||||||||| |||||||||||  ||||||||||| || |||||     
T  29643431 tatttttgcggtttggtttggtttggttcggttgctgagatgcaagccacaaaccgaaccgaaccgcgcggttcagtttaaaagtcatccgaactcatcc 29643332  T
Q  452 aaaccaagtgcgattttttacggt 475  Q
     |||||| |||| |||||| ||||    
T  29643331 gaaccaaatgcggttttttgcggt 29643308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 48996139 - 48996249
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| |||| ||||        |||||||||||||||||||||| ||| || | |||||    
T  48996139 caaaccaaaccaatgcggcttggattggttcgatttgtgcggtttatcgcaagat-aaaaaaatattacattaactctaatattgtcaacttgtcacaaa 48996237  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  48996238 ataaacatagga 48996249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 8176624 - 8176515
Alignment:
Q  4 aaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaaa 103  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||| || ||        |||||||||||||||||||||||| | || ||||||||    
T  8176624 aaaccaaaccaatgcggcttggattggttcggtttgtgcggtttatcgtgaaat-aaaaaaatattacattaactctaatattgcccacttgttacaaaa 8176526  T
Q  104 taaacatagga 114  Q
    |||||| ||||    
T  8176525 taaacacagga 8176515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 52344787 - 52344888
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||||||| |||||||||||||||||||||||||| || | ||||        |||| ||||||||||||||||||||| || |||||||    
T  52344787 caaaccaaaccaatgcggattggattggttcggtttgtgcggtttatcacaagat-aaaaaaatattccattaactctaatattgccaacttgttacaaa 52344885  T
Q  103 ata 105  Q
    |||    
T  52344886 ata 52344888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 294 - 441
Target Start/End: Original strand, 52345216 - 52345353
Alignment:
Q  294 aaaagagattattcttaggctatgtaattgggctagtacaagtttaagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagata 393  Q
    ||||| || |||||||  |||||| ||||||||||||||| ||||||||||||||  ||||||||||||||          ||||||||||| ||||||     
T  52345216 aaaagcgactattcttgagctatgcaattgggctagtacatgtttaagtaatattcattattcttgcggtt----------tggttcggttgctgagatg 52345305  T
Q  394 caaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatcc 441  Q
    |||||| |||| | |||||||||  ||| |||||| ||||||||||||    
T  52345306 caaaccacaaaccgaaccgaaccatgcgattcagtacaaaagtcatcc 52345353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 43630632 - 43630742
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||| ||||||||||||| ||||||||||||||||||||| |||| ||| |||||         ||||||||||||||||||||||  |||| |||| ||    
T  43630632 caaatcaaaccaatgcggcttggattggttcggtttgtgcagtttatcgtgagataaaaaaaa-attacattaactctaatattgcatatttgttacgaa 43630730  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  43630731 ataaacatagga 43630742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 51394773 - 51394883
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||||||||| |  || ||||||||| |||  |||||||| |||||||||        ||||||||||| |||||||||||||| ||||||||||    
T  51394773 caaaccaaaccaatgtgactttgattggttcagttgatgcggtttatcgcgagataaaaaaa-tattacattaattctaatattgccaacttattacaaa 51394871  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  51394872 ataaacatagga 51394883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 361 - 540
Target Start/End: Complemental strand, 1564669 - 1564490
Alignment:
Q  361 ggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatctaaaccaagt 460  Q
    |||||||||||||||||||| |||| | | ||  |||||||||| | |||| ||||  |||||| | |  || | | |||| ||| ||||  |||||| |    
T  1564669 ggtttggtttggtttggttcagttggtaaaatcaaaaccgcaaaccgaaccaaaccatgcggttaactaaaagaattatcccaatacatccgaaccaaat 1564570  T
Q  461 gcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacacccctaa 540  Q
    ||| |||||| | || |||||||  ||| ||| |||||||||||||||| |||  ||| |||||||||||||||||||||    
T  1564569 gcggttttttgcagtttcgatttgaattgattcagtttacgatttttcttttggattggtttggttttaaacacccctaa 1564490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 5261992 - 5261887
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||||||||   | ||||||||||||||||  |||||||| |||||||||        |||||||||||||||||||||||||| || ||| |||    
T  5261992 caaaccaaaccaatttagcttggattggttcggttgatgcggtttatcgcgagattaaaaa--tattacattaactctaatattgccaacttgttaaaaa 5261895  T
Q  103 ataaacat 110  Q
    ||||||||    
T  5261894 ataaacat 5261887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 20986486 - 20986530
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggttt 47  Q
    |||||||||||||||||||||||||||  ||||||||||||||||    
T  20986486 caaaccaaaccaatgcggtttggattgaatcggtttgtgcggttt 20986530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 114
Target Start/End: Original strand, 31301309 - 31301409
Alignment:
Q  15 atgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnnta-ttacattaactctaatattgccaatttattacaaaataaacatagg 113  Q
    ||||||||||| |||||||| || ||||||||| |||||||||         | || ||||||||||||||||||||| || ||||||||||||||||||    
T  31301309 atgcggtttggtttggttcgattagtgcggtttatcgcgagataaaaaaaaaaattccattaactctaatattgccaacttgttacaaaataaacatagg 31301408  T
Q  114 a 114  Q
    |    
T  31301409 a 31301409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 29636838 - 29636892
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat 57  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||||||||    
T  29636838 caaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagat 29636892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 42557789 - 42557843
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat 57  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||||||||    
T  42557789 caaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagat 42557843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 50570976 - 50570922
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat 57  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||||||||    
T  50570976 caaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagat 50570922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 18319589 - 18319545
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggttt 47  Q
    ||||||||||||||||||||||| |||| |||||| |||||||||    
T  18319589 caaaccaaaccaatgcggtttgggttggatcggttggtgcggttt 18319545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 18399092 - 18399136
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggttt 47  Q
    ||||||||||||||||||||||| |||| |||||| |||||||||    
T  18399092 caaaccaaaccaatgcggtttgggttggatcggttggtgcggttt 18399136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 23625919 - 23625875
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggttt 47  Q
    ||||||||| |||||||||||||||||| |||||| |||||||||    
T  23625919 caaaccaaatcaatgcggtttggattggatcggttggtgcggttt 23625875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 33
Target Start/End: Complemental strand, 29644143 - 29644113
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttc 33  Q
    |||||||||||||||||||||||||||||||    
T  29644143 caaaccaaaccaatgcggtttggattggttc 29644113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29700780 - 29700826
Alignment:
Q  1 aacaaaccaaaccaatgcggtttggattggttcggtttgtgcggttt 47  Q
    |||||||||||||||||||| ||| |||||||||||| |||| ||||    
T  29700780 aacaaaccaaaccaatgcggcttgtattggttcggttggtgcagttt 29700826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 36077627 - 36077681
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat 57  Q
    |||||||||||||| |||||||||||||||| |||  |||||||  |||||||||    
T  36077627 caaaccaaaccaatacggtttggattggttcagttgatgcggttaatcgcgagat 36077681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 48602545 - 48602503
Alignment:
Q  5 aaccaaaccaatgcggtttggattggttcggtttgtgcggttt 47  Q
    ||||||||||||||||||||| |||| |||||| |||||||||    
T  48602545 aaccaaaccaatgcggtttgggttggatcggttggtgcggttt 48602503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 37
Target Start/End: Complemental strand, 54274043 - 54274009
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtt 37  Q
    ||||||||||||||| |||||||||||||||||||    
T  54274043 caaaccaaaccaatgtggtttggattggttcggtt 54274009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 41325147 - 41325184
Alignment:
Q  5 aaccaaaccaatgcggtttggattggttcggtttgtgc 42  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  41325147 aaccaaaccaatgcggtttggattggatcggttcgtgc 41325184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 352 - 381
Target Start/End: Original strand, 51395253 - 51395282
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcg 381  Q
    ||||||||||||||||||||||||||||||    
T  51395253 tattcttgcggtttggtttggtttggttcg 51395282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 213; Significance: 1e-116; HSPs: 3)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 139 - 539
Target Start/End: Complemental strand, 69408 - 69008
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||| |||| |||||||||||| || |    
T  69408 aacttatgtcaaaataagtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaatgaaacaaatttatcactggaaatgaattgaaag 69309  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||||||||||| ||||||||||||| || |||||||||||| |||||||||| ||||    
T  69308 agatggaaaggaattagaatcgaatttgatggtgcaacaatggaaaaatcgaatcaaaagagattattattgggctatgtaattaggctagtacatgttt 69209  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||  |||||||||||| ||| |||||||||||||||||| |||||| ||||||||||| ||||||||||| ||||||||| |||||||||||    
T  69208 aagtaatattcattattcttgcgggttgttttggtttggttcggttgctgagatgcaaaccgcaaaccaaaccgaaccgcgcggttcattgcaaaagtca 69109  T
Q  439 tccaaattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacacccct 538  Q
    ||| |||||||| ||||||| |||  |||||| |||| | | ||| |||| |||| ||||  | ||||||| |||  ||| || ||||||||||||||||    
T  69108 tccgaattcatccaaaccaaatgctgttttttgcggtttaggtttggattgatttggtttttggtttttctattgggttggttcggttttaaacacccct 69009  T
Q  539 a 539  Q
    |    
T  69008 a 69008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 254 - 539
Target Start/End: Complemental strand, 77399 - 77114
Alignment:
Q  254 agaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaagtaatatttctta 353  Q
    |||||||||  ||||||| |||||||||||||||||||| ||||| ||||||| || |||||||||||| |||||||||| ||||||||||||||  |||    
T  77399 agaatcgaatttgatggtgcaacaatggaaaaatcgaatcaaaagtgattattattgggctatgtaattaggctagtacatgtttaagtaatattcatta 77300  T
Q  354 ttcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatctaa 453  Q
    ||||||||| ||| |||||||||||||||||| |||||| ||||||||||| ||||||||||| ||||||||| |||||||||||||| |||||||| ||    
T  77299 ttcttgcgggttgttttggtttggttcggttgctgagatgcaaaccgcaaaccaaaccgaaccgcgcggttcattgcaaaagtcatccgaattcatccaa 77200  T
Q  454 accaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacaccccta 539  Q
    ||||| |||  |||||| |||| | | ||| |||| |||| ||||  | ||||||| |||  ||| || |||||||||||||||||    
T  77199 accaaatgctgttttttgcggtttaggtttggattgatttggtttttggtttttctattgggttggttcggttttaaacaccccta 77114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #3
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 69558 - 69448
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||| ||||| || ||||||||||||||||| |||||||| |||||||||        ||||| |||||||||||||||||||| || |||||||    
T  69558 caaaccaaatcaatgtggcttggattggttcggtttatgcggtttatcgcgagataaaaaaa-tattatattaactctaatattgccaacttgttacaaa 69460  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  69459 ataaacatagga 69448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 212; Significance: 1e-116; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 139 - 470
Target Start/End: Complemental strand, 39256508 - 39256177
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||| ||||||||||||||||||||||| || |    
T  39256508 aacttatatcaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaaataaaggaaacaaattcatcattggaaatgaattgaaag 39256409  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||| ||||||||| |  ||||||||||| |||||||||| ||||    
T  39256408 agatggaaaggaattagaatcgaacctgatggtgcaacaatggaaaaatcgaatcgaaaaagattattcgtgagctatgtaatttggctagtacatgttt 39256309  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||| |||||| ||||||||||| | |||| |||| ||| |||||||||||||||||    
T  39256308 aagtaatattcattattcttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccaaaccgcgcagttcagtgcaaaagtca 39256209  T
Q  439 tccaaattcatctaaaccaagtgcgatttttt 470  Q
    ||||||||||||  |||||||| || ||||||    
T  39256208 tccaaattcatccgaaccaagtacggtttttt 39256177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 149 - 539
Target Start/End: Complemental strand, 33910639 - 33910249
Alignment:
Q  149 aaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaaggagatggaaag 248  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||| | |||||||||| || ||||||||||     
T  33910639 aaaattggtaaaattaagaagaaacataagcatgaaacaaattattgggaagtaaaggaaacaaattcatcacttgaaatgaattgaaagagatggaaaa 33910540  T
Q  249 gaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaagtaatatt 348  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||| ||||||||||||||||| | ||||||||||||||||||||  |||||||||||||    
T  33910539 gaattagaatcgaacctgatggtgcaacattggaaaaatcgaatcaaaagagattattcttaagttatgtaattgggctagtacatatttaagtaatatt 33910440  T
Q  349 tcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattca 448  Q
      ||||||||||||||||||||||||||||| | ||  |||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  33910439 cattattcttgcggtttggtttggtttggtttgattactgagatgcaaaccgcaaaccaaaccgaaccgcgcggttcagtgcaaaagtcatccaaattca 33910340  T
Q  449 tctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacaccccta 539  Q
    ||  ||||||||||| |||||| || | ||| ||| ||||  |||  ||| || ||||||| |||  ||| || |||||| ||||||||||    
T  33910339 tccgaaccaagtgcggttttttgcgatttcggtttggattggtttgatttgcggtttttctattgggttggttcggttttgaacaccccta 33910249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 139 - 475
Target Start/End: Complemental strand, 24910926 - 24910590
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||| | |||||||||| |  |    
T  24910926 aacttatatcaaaataggtaatattaagaagaaacataagcatgaaacaaattattgggaagtaaaggaaacaaattcatcactcgaaatgaattgagag 24910827  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    |||||||||| |||||||||||||| ||||||| ||||||| ||||||||||||  |||||||||||||||  |||||||||||||||||||||| ||||    
T  24910826 agatggaaagaaattagaatcgaacctgatggtgcaacaattgaaaaatcgaatcgaaagagattattcttgagctatgtaattgggctagtacatgttt 24910727  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||  |||||||| |||||||||||||||||||||||||| |||||| |||||| ||||   ||||||||  | ||||||| |||||||||||    
T  24910726 aagtaatattcattattcttccggtttggtttggtttggttcggttgctgagatgcaaaccacaaactgaaccgaactgcacggttcaatgcaaaagtca 24910627  T
Q  439 tccaaattcatctaaaccaagtgcgattttttacggt 475  Q
    ||| ||||||||  ||||||||||| |||||| ||||    
T  24910626 tccgaattcatccgaaccaagtgcggttttttgcggt 24910590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 183; E-Value: 2e-98
Query Start/End: Original strand, 139 - 441
Target Start/End: Original strand, 33474651 - 33474953
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||| ||| |||||||||| |||||||||||| || |    
T  33474651 aacttatatcaaaataagtaaaattaagaagaaacataagcatgaaacaaattattgggatgtaaaggaaacaaattcatcactggaaatgaattgaaag 33474750  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    ||||||||||||||||||||||||| |||||   |||||||| ||||||| ||| ||||||||||||||||  ||||||||||||||||||||||  |||    
T  33474751 agatggaaaggaattagaatcgaacctgatgacgcaacaatgaaaaaatcaaatcaaaagagattattcttgagctatgtaattgggctagtacatattt 33474850  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||  |||||||||| |||||||||||||||||||||||| |||||| |||| | |||| | ||||||||| |||||||||||||||||||||    
T  33474851 aagtaatattcgttattcttgcagtttggtttggtttggttcggttgatgagatgcaaatcacaaaccgaaccgaaccgcgcggttcagtgcaaaagtca 33474950  T
Q  439 tcc 441  Q
    |||    
T  33474951 tcc 33474953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 139 - 542
Target Start/End: Complemental strand, 51252293 - 51251900
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||| || | |||||||||||| || |    
T  51252293 aacttatgtcaaaataagtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaatgaaacaaatttataactggaaatgaattgaaag 51252194  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    ||||||||||||||||||||||||  ||||||| |||||||||||||||||||| ||||||||||||| || |||||||||||| |||||||||| ||||    
T  51252193 agatggaaaggaattagaatcgaatttgatggtgcaacaatggaaaaatcgaatcaaaagagattattatttggctatgtaattaggctagtacatgttt 51252094  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||  |||||||||||| |||||||          ||||| |||||| ||||||||||| ||||||||||  ||||||||| |||||||||||    
T  51252093 aagtaatattcattattcttgcgggttggttt----------ggttgctgagatgcaaaccgcaaaccaaaccgaactgcgcggttcattgcaaaagtca 51252004  T
Q  439 tccaaattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacacccct 538  Q
    ||| ||||||||  |||||| |||| |||||| |||| | ||||| |||| || | |||| || ||||||| |||  ||| || ||||||||||||||||    
T  51252003 tccgaattcatccgaaccaaatgcggttttttgcggtttagatttggattgatatggtttgcggtttttctattggattggttcggttttaaacacccct 51251904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 178; E-Value: 2e-95
Query Start/End: Original strand, 139 - 540
Target Start/End: Original strand, 45692006 - 45692402
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||| | |||||||||||  || ||||||||| || |    
T  45692006 aacttatatcaaaataggtaaaattaagaagaaacataagcatgaagcaaattattaggaagtaaaggatataaattcatctctgtaaatgaattgaaag 45692105  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    ||||||||||||||||||||||||| | ||||| |||||||| |||||| |||| ||||||||||||||||  | ||||||||||| ||||||||  |||    
T  45692106 agatggaaaggaattagaatcgaacctaatggtgcaacaatgaaaaaattgaatcaaaagagattattcttgagttatgtaattggactagtacatattt 45692205  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||| ||||||||||     |||||| ||||||||||||| |||||| ||||||||||| | |||||||||  ||||||||||||||||||||    
T  45692206 aagtaatatttattattcttgc-----ggtttgttttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagtca 45692300  T
Q  439 tccaaattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacacccct 538  Q
    ||||||||||||  ||||||||||  |||||| | || ||||||| ||||  |||  |||  ||||||||| ||   ||| |||| ||||||||||||||    
T  45692301 tccaaattcatccgaaccaagtgcagttttttgccgtttcgatttggattggtttgatttgtgatttttctatttggttggtttgattttaaacacccct 45692400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 177; E-Value: 6e-95
Query Start/End: Original strand, 139 - 534
Target Start/End: Complemental strand, 16529367 - 16528970
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaa---gaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaa 235  Q
    |||||||| || ||||||||||||||||||   |||||||||||||||||||||||||| |||||||||| ||| ||||| |||  |||||||||||| |    
T  16529367 aacttatatcataataggtaaaattaagaaaaagaaacataagcatgaaacaaattatttggaagaaaaggaaacaaattgatccctggaaatgaattga 16529268  T
Q  236 aggagatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaag 335  Q
    | |||||||||||||||||||||||||| ||||||| |||||||| |||| |||||| |||||||||||||||| |||||||||||||||||| |||| |    
T  16529267 aagagatggaaaggaattagaatcgaacctgatggtgcaacaatgaaaaattcgaatcaaaagagattattcttgggctatgtaattgggctattacatg 16529168  T
Q  336 tttaagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaag 435  Q
    |||||||||||||   |||||||||||||||||||||||||||| ||||| |||||| ||||||||| |  |||||||||  ||| ||||||||||||||    
T  16529167 tttaagtaatattcactattcttgcggtttggtttggtttggtttggttgctgagatgcaaaccgcatactaaaccgaactgcgctgttcagtgcaaaag 16529068  T
Q  436 tcatccaaattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacac 534  Q
     ||||| |||||||   ||||||||||  |||||| | || ||||||| ||||  |||||||| |  ||||||| |||| ||  ||||||||| |||||    
T  16529067 ccatccgaattcatacgaaccaagtgcagttttttgcagtttcgatttggatt-gtttagtttgcagtttttctattgagttagtttggttttgaacac 16528970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 139 - 441
Target Start/End: Original strand, 32954289 - 32954586
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||| |||| ||| |||||||||| || ||||||||| || |    
T  32954289 aacttatatcaaaataggtaaaattaagaagaaacataagcatgaaacaaattattatgaagtaaaggaaacaaattcatcactgaaaatgaattgaaag 32954388  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    || ||||||| ||||||||| |||| ||||||| ||||||||||||||||||||  ||||| |||||||||  |||||||||||||||| ||||| ||||    
T  32954389 agttggaaagtaattagaattgaacctgatggtgcaacaatggaaaaatcgaatcgaaagaaattattcttgagctatgtaattgggcttgtacatgttt 32954488  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||  |||||||     | ||||||||||||||||||||| |||||| |||||||| || | ||| |||||  |||||| |||||||||||||    
T  32954489 aagtaatattcattattct-----tatggtttggtttggttcggttgctgagatgcaaaccgcgaaccgaacggaaccgtgcggtttagtgcaaaagtca 32954583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 139 - 462
Target Start/End: Complemental strand, 1160890 - 1160583
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||| ||| |||||| |||||||||||| || |    
T  1160890 aacttatatcaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaaataaaggaaacaaaatcatcactggaaatgaattgaaag 1160791  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    |||||||||||||||||||||| || ||||| | ||||||||||||||| ||||  ||| |||||||||||  ||||||||||| ||||||             
T  1160790 agatggaaaggaattagaatcgtacctgatgttgcaacaatggaaaaattgaatcgaaaaagattattcttgagctatgtaatttggctag--------- 1160700  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
          ||||  ||||||||||||||||||||||||||||||||||| |||||| | ||||||||||| ||||||| |  ||||||||||||||||||||    
T  1160699 ------tattcattattcttgcggtttggtttggtttggttcggttgctgagatgc-aaccgcaaatcgaaccgaatcgtgcggttcagtgcaaaagtca 1160607  T
Q  439 tccaaattcatctaaaccaagtgc 462  Q
    ||  ||||||||| ||||||||||    
T  1160606 tctgaattcatctgaaccaagtgc 1160583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 142 - 514
Target Start/End: Original strand, 44918754 - 44919112
Alignment:
Q  142 ttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaaggaga 241  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||| ||||| |||| |||||||||||  || ||||    
T  44918754 ttatatcaaaataggtaaaattaagaagaaatataagcatgaaacaaattattgggaagtaaaggaaacaaattaatcactggaaatgaatcgaaagaga 44918853  T
Q  242 tggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaag 341  Q
    |||||| ||||||||||||||| ||||||  |||||||||||||||| ||| |||| |||||||||||  ||||||||||||| |||||||| |||||||    
T  44918854 tggaaaagaattagaatcgaacttgatggagcaacaatggaaaaatcaaatcaaaaaagattattcttgagctatgtaattggactagtacatgtttaag 44918953  T
Q  342 taatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatcc 441  Q
    |||||||  ||||||||||||| |               |||||  ||||| ||||||||||| |||||| |||| ||| ||||||||||||||| ||||    
T  44918954 taatattcattattcttgcggtct---------------ggttgcagagatgcaaaccgcaaaccaaaccaaaccgcgcagttcagtgcaaaagttatcc 44919038  T
Q  442 aaattcatctaaaccaagtgc-gattttttacggtatcgatttagattaatttagtttacgatttttctgttga 514  Q
     |||||||| ||| ||||||| | ||||||||||| || |||| | || ||||  ||| |||||||||| ||||    
T  44919039 gaattcatccaaatcaagtgcggtttttttacggtttcaatttgggttgatttgatttgcgatttttctattga 44919112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 139 - 309
Target Start/End: Original strand, 29389242 - 29389412
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||  ||| || ||||||  ||||||||| || || |    
T  29389242 aacttatatcaaaataggtaaaattaagaagaaatataagcatgaaacaaattattgggaagtaaaagaaacaagttcatccctggaaatgagttgaaag 29389341  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattctt 309  Q
    ||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  29389342 agatggagaggaattagaatcgaacctgatggtgcaacaatggaaaaatcgaattaaaagagattattctt 29389412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 257 - 473
Target Start/End: Original strand, 11899367 - 11899584
Alignment:
Q  257 atcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaagtaatatttcttattc 356  Q
    ||||||| ||||||| |||||||||||||||| ||| |||| |||||||||||  |||||||||||| |||||||||  |||||||||||||  ||||||    
T  11899367 atcgaacatgatggtgcaacaatggaaaaatcaaatcaaaaaagattattcttgagctatgtaattgagctagtacatatttaagtaatattcattattc 11899466  T
Q  357 ttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcat-ctaaac 455  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||||||||||| |||     | || |||||||||||||||  ||||||| | |||     
T  11899467 ttgcggtttggtttggtttgattcggttgctgagatgcaaaccgcaaatcaaaccaaactgtatgttttagtgcaaaagtcatctgaattcatccgaaat 11899566  T
Q  456 caagtgcgattttttacg 473  Q
    ||||| ||||||||||||    
T  11899567 caagtacgattttttacg 11899584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 24911076 - 24910966
Alignment:
Q  4 aaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaaa 103  Q
    ||||||||||||||| |||||||||||||||||||||||||||| | |||||||        |||||||||||||||||||||||||| || ||||||||    
T  24911076 aaaccaaaccaatgcagtttggattggttcggtttgtgcggtttattgcgagataaaaaaaatattacattaactctaatattgccaacttgttacaaaa 24910977  T
Q  104 taaacatagga 114  Q
    |||||||||||    
T  24910976 taaacatagga 24910966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 33474502 - 33474609
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||         ||||||||||||||||||||||||| || |||||||    
T  33474502 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttatcgcgagataaaaaaa--attacattaactctaatattgccaacttgttacaaa 33474599  T
Q  103 ataaacatag 112  Q
    ||||||||||    
T  33474600 ataaacatag 33474609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 299 - 454
Target Start/End: Complemental strand, 6722529 - 6722380
Alignment:
Q  299 agattattcttaggctatgtaattgggctagtacaagtttaagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaac 398  Q
    |||||||||||  ||||||||||||||  |||||| ||||||||||||||  ||| ||||||     |||||||||||||||||||| |||||| |||||    
T  6722529 agattattcttgagctatgtaattgggtcagtacatgtttaagtaatattcatta-tcttgc-----ggtttggtttggttcggttgctgagatgcaaac 6722436  T
Q  399 cgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatctaaa 454  Q
    |||||||| || |||||| |   ||||| |||||||||||||||||||||||||||    
T  6722435 cgcaaatcgaatcgaaccgcaaagttcaatgcaaaagtcatccaaattcatctaaa 6722380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 44918603 - 44918711
Alignment:
Q  4 aaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaaa 103  Q
    ||||||||||||| |||||||||||||||||||||||||||||| || ||||||        |||||||||||||||||||||||||| || ||||||||    
T  44918603 aaaccaaaccaatacggtttggattggttcggtttgtgcggtttatcacgagat--aaaaaatattacattaactctaatattgccaacttgttacaaaa 44918700  T
Q  104 taaacatagga 114  Q
    |||||||||||    
T  44918701 taaacatagga 44918711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 32954107 - 32954217
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||| |||||        |||||||||||||||||||||||||| || |||| ||    
T  32954107 caaaccaaaccaatgcggcttggattggttcggtttgtgcggtttatcgtgagataaaaaaaatattacattaactctaatattgccaacttgttac-aa 32954205  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  32954206 ataaacatagga 32954217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 352 - 441
Target Start/End: Original strand, 8211639 - 8211728
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatcc 441  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||||| |||||||||||  |||||||||||    
T  8211639 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatcc 8211728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 352 - 441
Target Start/End: Original strand, 20494094 - 20494183
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatcc 441  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||| ||||||| ||||||||| |||||||||||  |||||||||||    
T  20494094 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaacagcaaatcgaaccgaaccgcgcggttcagtctaaaagtcatcc 20494183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 45691858 - 45691966
Alignment:
Q  4 aaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaaa 103  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||| |||||        |||||||||||||||||||||| ||| || ||||||||    
T  45691858 aaaccaaactaatgcggtttggattggttcggtttgtgcggtttatcgtgagat--aaaaaatattacattaactctaatattggcaacttgttacaaaa 45691955  T
Q  104 taaacatagga 114  Q
    |||||||||||    
T  45691956 taaacatagga 45691966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 1161770 - 1161664
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||||| | || ||||||||||||||||||||||| ||| |||||        |||||||||||||||||||||||||| ||||||||||    
T  1161770 caaaccaaaccaatgcagcttcgattggttcggtttgtgcggtttatcgtgagataaaaaa--tattacattaactctaatattgccaacttattacaaa 1161673  T
Q  103 ataaacata 111  Q
    |||||||||    
T  1161672 ataaacata 1161664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 16529518 - 16529407
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| |||| ||||        ||| |||||||||||||||||| ||| || |||||||    
T  16529518 caaaccaaaccaatgcggcttgaattggttcggtttgtgcggtttatcgcaagataaaaaaaatatgacattaactctaatattgtcaacttgttacaaa 16529419  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  16529418 ataaacatagga 16529407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 352 - 475
Target Start/End: Complemental strand, 29707801 - 29707683
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| ||||||||||||||||||||||||||||| |||||| |||||||     |||||||||||  ||||||||||  ||||||||||| || |||||     
T  29707801 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccg-----caaaccgaaccgtgcggttcagtctaaaagtcatccgaactcatcc 29707707  T
Q  452 aaaccaagtgcgattttttacggt 475  Q
     |||||||||||||||||| ||||    
T  29707706 gaaccaagtgcgattttttgcggt 29707683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 51252443 - 51252333
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||| |||||||| ||| |||||||||||||||||||||| || ||||||        |||||||||||||||||||||||||| || |||||||    
T  51252443 caaaccaaatcaatgcggcttgaattggttcggtttgtgcggtttatcacgagataaaaaga-tattacattaactctaatattgccaacttgttacaaa 51252345  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  51252344 ataaacatagga 51252333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 352 - 441
Target Start/End: Complemental strand, 5155057 - 5154968
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatcc 441  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||||| | |||||||||  ||||||||||  |||||||||||    
T  5155057 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtctaaaagtcatcc 5154968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 11899070 - 11899181
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat--nnnnnnnntattacattaactctaatattgccaatttattaca 100  Q
    ||||| |||||||| |||||||||||||||||||||||||||||| |||||||||          ||||||||||||||||||||| |||| || |||||    
T  11899070 caaactaaaccaatacggtttggattggttcggtttgtgcggtttatcgcgagataaaaaaaaaatattacattaactctaatatttccaaattgttaca 11899169  T
Q  101 aaataaacatag 112  Q
    ||||||||||||    
T  11899170 aaataaacatag 11899181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 29389092 - 29389202
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||| |||||||||||||||||||||||||| ||| |||| |||| ||||        ||||||||||  |||||||||||||| || |||||||    
T  29389092 caaaccaaatcaatgcggtttggattggttcggtttatgcagtttatcgcaagat-aaaaaaatattacattagttctaatattgccaaattgttacaaa 29389190  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  29389191 ataaacatagga 29389202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 39256659 - 39256549
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||| ||| |||||||||||||||||||||||||| ||| | |||        |||||||||||||||||||||||||| || |||| ||    
T  39256659 caaaccaaaccaatacggcttggattggttcggtttgtgcggtttatcgtgtgat-aaaaaaatattacattaactctaatattgccaacttgttaccaa 39256561  T
Q  103 ataaacatagga 114  Q
    |||||| |||||    
T  39256560 ataaacttagga 39256549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 383 - 441
Target Start/End: Original strand, 29390133 - 29390191
Alignment:
Q  383 ttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatcc 441  Q
    |||||||||| ||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  29390133 ttgttgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtgcaaaagtcatcc 29390191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 33910799 - 33910689
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||| |||||||||||||||| |||||||||||||| |||||||| ||  |||||        |||||||||||| ||| ||||||||| || |||||||    
T  33910799 caaatcaaaccaatgcggttttgattggttcggtttatgcggtttatcatgagataaaaaaa-tattacattaaccctattattgccaacttgttacaaa 33910701  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  33910700 ataaacatagga 33910689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 11899224 - 11899301
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaac-ataagcatgaaacaaattattgggaagaaaagaaaataaatt 215  Q
    |||| ||| ||||||||||||||||||||||||   ||||||||||||||||||||||| ||| |||| ||| |||||    
T  11899224 aactcatatcaaaataggtaaaattaagaagaatttataagcatgaaacaaattattggaaagtaaaggaaacaaatt 11899301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 5155351 - 5155297
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat 57  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||||||||    
T  5155351 caaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagat 5155297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 8211343 - 8211397
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat 57  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||||||||    
T  8211343 caaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagat 8211397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 26345075 - 26345033
Alignment:
Q  4 aaaccaaaccaatgcggtttggattggttcggtttgtgcggtt 46  Q
    ||||||||||||||||||||||||||| |||||| ||||||||    
T  26345075 aaaccaaaccaatgcggtttggattggatcggttggtgcggtt 26345033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 357 - 411
Target Start/End: Complemental strand, 45949151 - 45949097
Alignment:
Q  357 ttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaacc 411  Q
    ||||||||| ||||||||||||||||||| | | ||| |||||||||||||||||    
T  45949151 ttgcggttttgtttggtttggttcggttggtaaaataaaaaccgcaaatcaaacc 45949097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 40095439 - 40095395
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggttt 47  Q
    ||||||||||||||| |||||||||||| |||||| |||||||||    
T  40095439 caaaccaaaccaatgtggtttggattggatcggttggtgcggttt 40095395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 20493813 - 20493856
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtt 46  Q
    ||||||||||||||||||||||||||||||| |||  |||||||    
T  20493813 caaaccaaaccaatgcggtttggattggttcagttgatgcggtt 20493856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 361 - 475
Target Start/End: Original strand, 17652198 - 17652312
Alignment:
Q  361 ggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatctaaaccaagt 460  Q
    ||||||||||||||||||||||||| | | ||  ||||| ||||||||||  ||||  |||||| ||   |||||| |||| ||| |||| ||| ||| |    
T  17652198 ggtttggtttggtttggttcggttggtaaaatgaaaaccccaaatcaaacaaaaccatgcggttgaggaaaaaagtgatccgaatacatccaaatcaaat 17652297  T
Q  461 gcgattttttacggt 475  Q
    |||||||||| ||||    
T  17652298 gcgattttttgcggt 17652312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 33
Target Start/End: Original strand, 33769937 - 33769967
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttc 33  Q
    |||||||||||||||||||||||||||||||    
T  33769937 caaaccaaaccaatgcggtttggattggttc 33769967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 210; Significance: 1e-114; HSPs: 4)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 139 - 539
Target Start/End: Original strand, 106244 - 106645
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaaga-aaataaattcatcattggaaatgaattaaag 237  Q
    |||||||  ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||   ||| ||||| |||| |||||||||||| ||     
T  106244 aacttatgtcaaaataagtaaaattaagaagaaacataagcatgaaacaaattattcggaagaaaaatgaaacaaatttatcactggaaatgaattgaaa 106343  T
Q  238 gagatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtt 337  Q
    |||||||||||||||||||||||||  ||||||| |||||||||||||||||||| |||||| |||||| ||||||||||||||| |||||||||| |||    
T  106344 gagatggaaaggaattagaatcgaatttgatggtgcaacaatggaaaaatcgaataaaaagaaattattattaggctatgtaattaggctagtacatgtt 106443  T
Q  338 taagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtc 437  Q
    |||||||||||  |||||||||||| |||||| |||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||| ||||||||||    
T  106444 taagtaatattcattattcttgcgggttggttgggtttggttcggttgttgagatgcaaaccgcaaaccaaaccgaaccgcgcggttcattgcaaaagtc 106543  T
Q  438 atccaaattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacacccc 537  Q
    |||| ||||||||  |||||| |||| |||||| |||| | | ||| |||| |||| |||| | |||||||| |||  ||| || |||||||||||||||    
T  106544 atccgaattcatccgaaccaaatgcggttttttgcggtttaggtttggattgatttggtttgctatttttctattgggttggttcggttttaaacacccc 106643  T
Q  538 ta 539  Q
    ||    
T  106644 ta 106645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 139 - 379
Target Start/End: Original strand, 128851 - 129092
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaaga-aaataaattcatcattggaaatgaattaaag 237  Q
    |||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||   ||| ||||| |||| || ||||||||| ||     
T  128851 aacttatgtcaaaataagtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaaatgaaacaaatttatcactgaaaatgaattgaaa 128950  T
Q  238 gagatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtt 337  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||||||||||||  |||||||||||| || |||||||||||| |||||||||| |||    
T  128951 gagatggaaaggaattagaatcgaatttgatggtgcaacaatggaaaaatcgaatataaagagattattattgggctatgtaattaggctagtacatgtt 129050  T
Q  338 taagtaatatttcttattcttgcggtttggtttggtttggtt 379  Q
    |||||||||||  |||||||||||| ||||||||||||||||    
T  129051 taagtaatattcattattcttgcgggttggtttggtttggtt 129092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 128701 - 128811
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||| |||||||| |||||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||| || | |||||    
T  128701 caaaccaaatcaatgcggcttggattggttcggtttgtgcggtttatcgcgagat-aaaaaaatattacattaactctaatattgccaacttgtaacaaa 128799  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  128800 ataaacatagga 128811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 106094 - 106204
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||| |||||||| ||| |||||||||||||||||||||| ||| |||||        |||||||||||||||||||||||||| || |||||||    
T  106094 caaaccaaatcaatgcggcttgaattggttcggtttgtgcggtttatcgagagataaaaaaa-tattacattaactctaatattgccaacttgttacaaa 106192  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  106193 ataaacatagga 106204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 139 - 475
Target Start/End: Complemental strand, 44979648 - 44979312
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    ||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||| |||||||||| ||||||||||||||| |    
T  44979648 aacttatattaaaataggtaaaattaagaagaaacataagcatgaagcaaattattggaaagaaaaggaaacaaattcatcactggaaatgaattaaaag 44979549  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    |||||||||||||||||||| |||| | ||||| |||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||| ||||    
T  44979548 agatggaaaggaattagaattgaacctcatggtgcaacaatggaaaaatcgaatcaaaagagattattcctgggctatgtaattgggctagtacatgttt 44979449  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    |||||| |||  ||||||||||||||||||||||||||||||||| | |||||| ||||||||||| |||| | |||| ||||||||||||||||| |||    
T  44979448 aagtaacattcattattcttgcggtttggtttggtttggttcggtagctgagatgcaaaccgcaaaccaaatcaaaccgcgcggttcagtgcaaaattca 44979349  T
Q  439 tccaaattcatctaaaccaagtgcgattttttacggt 475  Q
    ||| ||||||||  ||||||||||| |||||| ||||    
T  44979348 tccgaattcatccgaaccaagtgcggttttttgcggt 44979312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 139 - 536
Target Start/End: Complemental strand, 25298129 - 25297732
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    ||||||||  ||||||||||||||||||||||  |||||||||||||||||||||||||||| |||  ||| |||||||||| ||||||| |||| || |    
T  25298129 aacttatattaaaataggtaaaattaagaagaggcataagcatgaaacaaattattgggaagtaaatgaaacaaattcatcactggaaataaattgaaag 25298030  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    |||||||||| |||||||||||||| ||||||| |||||||||||||||||||| ||||| ||||||||||  |||||||||||||||||||||| ||||    
T  25298029 agatggaaagaaattagaatcgaacctgatggtgcaacaatggaaaaatcgaatcaaaagcgattattcttgagctatgtaattgggctagtacatgttt 25297930  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||| |||||| |||||| |||| |||||||||||  ||||||||  ||||||||||    
T  25297929 aagtaatattcattattcttgcggtttggtttggtttggttcggttgctgagatgcaaaccacaaaccaaaccgaaccgtgcggttcaaagcaaaagtca 25297830  T
Q  439 tccaaattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacaccc 536  Q
    ||| ||||||||  || |||||||| ||||||||||| ||  ||| ||||  |||||||| |||||||||| |||  ||| || |||||| |||||||    
T  25297829 tccgaattcatccgaatcaagtgcggttttttacggtttcagtttggattggtttagtttgcgatttttctattgggttggttcggttttgaacaccc 25297732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 139 - 441
Target Start/End: Original strand, 44035519 - 44035821
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||||| |||| ||||| |||| ||| |||||||||| |||||||||||| || |    
T  44035519 aacttatatcaaaataggtaaaattaagaagaaacataagcaagaaacaaaatatttggaagtaaaggaaacaaattcatcactggaaatgaattgaaag 44035618  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    ||||||||||||||||||||||||| |||| || |||||||| ||||||||||| ||||||||||||||||  | ||||||| || ||||||||| ||||    
T  44035619 agatggaaaggaattagaatcgaacttgatcgtgcaacaatgaaaaaatcgaatcaaaagagattattcttgagttatgtaactgagctagtacatgttt 44035718  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||  ||||| ||||||||||||||||||||||||||||| |||||| ||||||| ||| ||||||||||| |||||||||||||||||||||    
T  44035719 aagtaatattcattatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgtaaaccaaaccgaaccgcgcggttcagtgcaaaagtca 44035818  T
Q  439 tcc 441  Q
    |||    
T  44035819 tcc 44035821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 163 - 469
Target Start/End: Original strand, 11376120 - 11376421
Alignment:
Q  163 taagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaaggagatggaaaggaattagaatcgaa 262  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||| |||||||||||| || |||||||||||||||||||||||||    
T  11376120 taagaagaaacataagcatgaaacaaattattgggaagtaaaggaaacaaattcatcactggaaatgaattgaaagagatggaaaggaattagaatcgaa 11376219  T
Q  263 cgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaagtaatatttcttattcttgcgg 362  Q
    | ||||||| |||||||||||||||||||| ||||| |||||||||| ||||||| ||||| ||||||||| ||||||||||||||   |||||||||||    
T  11376220 cctgatggtgcaacaatggaaaaatcgaatcaaaagcgattattcttgggctatgcaattgagctagtacatgtttaagtaatattcagtattcttgcgg 11376319  T
Q  363 tttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatctaaaccaagtgc 462  Q
    ||     ||||||||||| |||| |||||| ||||| ||||| | ||||||||| |||||||||||||||||||||||  ||||||||  ||||||||||    
T  11376320 tt-----tggtttggttcagttgctgagatgcaaactgcaaaccgaaccgaaccgcgcggttcagtgcaaaagtcatctgaattcatccgaaccaagtgc 11376414  T
Q  463 gattttt 469  Q
    | |||||    
T  11376415 ggttttt 11376421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 170; E-Value: 9e-91
Query Start/End: Original strand, 142 - 416
Target Start/End: Complemental strand, 17916730 - 17916454
Alignment:
Q  142 ttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaaggaga 241  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||| |||||||||||| || ||||    
T  17916730 ttatatcaaaataggtaaaattaagaagaaacataagcatgaaacaaattatttggaagtaaagaaaacaaattcatcactggaaatgaattgaaagaga 17916631  T
Q  242 tggaaaggaattagaatcgaacgt--gatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttta 339  Q
    ||||||||||||| |||||||| |  |||||| ||| ||||||||||  |||| ||||||||||||||||  |||||||||||||||||||||| |||||    
T  17916630 tggaaaggaattataatcgaacctctgatggtgcaataatggaaaaaatgaatcaaaagagattattcttgagctatgtaattgggctagtacatgttta 17916531  T
Q  340 agtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacc 416  Q
    |||||||||  ||||||||||||||||||||||||||| ||||||| |||||| |||||| |||| |||||||||||    
T  17916530 agtaatattcattattcttgcggtttggtttggtttggctcggttgctgagatgcaaaccacaaaccaaaccgaacc 17916454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 170; E-Value: 9e-91
Query Start/End: Original strand, 142 - 539
Target Start/End: Complemental strand, 19936990 - 19936598
Alignment:
Q  142 ttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaaggaga 241  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||| || |||||||||||| || ||||    
T  19936990 ttatatcaaaataagtaaaattaagaagaaacataagcatgaaacaaattattgggaagtaaaggaaacaaattcagcactggaaatgaattgaatgaga 19936891  T
Q  242 tggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaag 341  Q
    ||||||| |||||||||||||| ||||||| |||||||| ||||||||||| |||| | |||||||||  |||||||| ||| ||||||||| || ||||    
T  19936890 tggaaagaaattagaatcgaacatgatggtgcaacaatgaaaaaatcgaatcaaaatatattattcttgagctatgtatttgagctagtacatgtataag 19936791  T
Q  342 taatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatcc 441  Q
    |||||||  |||||||||||||||||||||||||||||     | |||||||||||| ||||| | ||||||||| ||| |||||||| ||||| ||||     
T  19936790 taatattcattattcttgcggtttggtttggtttggtt-----gctgagatacaaactgcaaaccgaaccgaaccgcgcagttcagtgaaaaagacatct 19936696  T
Q  442 aaattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacaccccta 539  Q
     ||||||||  ||||||||||| |||||| |||| ||| ||| ||||  ||| ||| ||| ||||||| |||  ||| || |||||| ||||||||||    
T  19936695 gaattcatccgaaccaagtgcggttttttgcggtttcggtttggattggtttggttcacggtttttctattgggttggttcggttttgaacaccccta 19936598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 139 - 493
Target Start/End: Original strand, 34910518 - 34910873
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaa-gaaaagaaaataaattcatcattggaaatgaattaaag 237  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||  | ||||||||| |      
T  34910518 aacttatatcaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaaagaaaaggaaacaaattcatcacagaaaatgaattgaga 34910617  T
Q  238 gagatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtt 337  Q
    || ||| ||| ||||||||||||||| ||||||| |||||||||||||||||||| |||||| ||||||||| ||||||||||||||| ||||||| |||    
T  34910618 gaaatgaaaacgaattagaatcgaacttgatggtgcaacaatggaaaaatcgaatcaaaagatattattcttgggctatgtaattgggttagtacatgtt 34910717  T
Q  338 taagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaac-----ctcgcggttcagtgcaa 432  Q
    |||||||||||  ||||||||||||||     ||||||| |||||||| | |||| ||||||| ||| ||||||||||     | ||||||| | |||||    
T  34910718 taagtaatattcattattcttgcggtt-----tggtttgtttcggttgctcagattcaaaccgtaaaccaaaccgaaccgaaacgcgcggtttattgcaa 34910812  T
Q  433 aagtcatccaaattcatctaaaccaagtgcgattttttacggtatcgatttagattaattt 493  Q
    ||||||||  ||||||||  ||||||||| |||||||||| || | | |||| ||||||||    
T  34910813 aagtcatctgaattcatccgaaccaagtgtgattttttacagttttggtttacattaattt 34910873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 244 - 536
Target Start/End: Original strand, 18360115 - 18360407
Alignment:
Q  244 gaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaagta 343  Q
    ||||| |||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  18360115 gaaagaaattagaatcgaacatgatggtgcaacaatggaaaaatcgaatcaaaagagattattttcgggctatgtaattgggctagtacaagtttaagta 18360214  T
Q  344 atatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaa 443  Q
    |||||  ||||||||||||||||||||||||||||||||||| |||||| ||||| | ||| ||||||||||| || |||||| |||||||||||| | |    
T  18360215 atattgattattcttgcggtttggtttggtttggttcggttgctgagatgcaaactgtaaaccaaaccgaaccgcgtggttcaatgcaaaagtcattcga 18360314  T
Q  444 attcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacaccc 536  Q
    ||| |||  ||||||||||| ||||||    | ||| ||| ||||  |||||||| || ||||||| |||  ||| || ||||||||||||||    
T  18360315 atttatccgaaccaagtgcggttttttggaatttcggtttggattggtttagtttgcggtttttctattgggttggttcggttttaaacaccc 18360407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 118 - 302
Target Start/End: Original strand, 20420386 - 20420572
Alignment:
Q  118 ctaaccagattaaaatcaaaca--acttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaatt 215  Q
    ||||||| |||||| |||||||  |||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||| |||||    
T  20420386 ctaaccatattaaattcaaacacaacttatattaaaataggtaaaattaagaagaaacataagcatgaatcaaattattgggaagaaaatgaaacaaatt 20420485  T
Q  216 catcattggaaatgaattaaaggagatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagat 302  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||| ||||| | |||||||||||||||||||||||| |||||    
T  20420486 catcattggaaatgaattgaaggagatggaaaggaattagaatcaaacctgatgatgcaacaatggaaaaatcgaattaaaggagat 20420572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 118 - 248
Target Start/End: Original strand, 18357457 - 18357589
Alignment:
Q  118 ctaaccagattaaaatcaaacaac--ttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaatt 215  Q
    ||||||| ||||| |||||||||   |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||    
T  18357457 ctaaccaaattaagatcaaacaaaatttatataaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaatgaaacaaatt 18357556  T
Q  216 catcattggaaatgaattaaaggagatggaaag 248  Q
    ||||| |||||||||||| ||| ||||||||||    
T  18357557 catcactggaaatgaattgaagaagatggaaag 18357589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 352 - 539
Target Start/End: Original strand, 9811739 - 9811926
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||||| |||||||||||  ||||||||||| || |||||     
T  9811739 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 9811838  T
Q  452 aaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacaccccta 539  Q
     ||||||||||| |||||| |||| ||| ||| ||||  ||  |||| || ||||||| |||  ||| || |||||| ||||||||||    
T  9811839 gaaccaagtgcggttttttgcggtttcggtttggattggttcggtttgcggtttttctattgggttggttcggttttgaacaccccta 9811926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 44979797 - 44979689
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||        |||||||||||||||||||||||||| ||||||||||    
T  44979797 caaaccaaaccaatgcggtttggattggttcggcttgtgcggtttatcgcgagat--aaaaaatattacattaactctaatattgccaacttattacaaa 44979700  T
Q  103 ataaacatagg 113  Q
    |||||||||||    
T  44979699 ataaacatagg 44979689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 365 - 540
Target Start/End: Original strand, 16579002 - 16579177
Alignment:
Q  365 tggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatctaaaccaagtgcga 464  Q
    |||||||||||||||| |||| |||||| ||||||||||| | ||||||||| |||||||||||  ||||||||||| || |||||  ||||||||||||    
T  16579002 tggtttggtttggttcagttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtgcga 16579101  T
Q  465 ttttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacacccctaa 540  Q
    |||||| |||| ||| ||| ||||  ||  |||| || ||||||| |||  ||| || |||||| |||||||||||    
T  16579102 ttttttgcggtttcggtttggattggttcggtttgcggtttttctattgggttggttcggttttgaacacccctaa 16579177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 352 - 475
Target Start/End: Original strand, 20420777 - 20420900
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| ||||||||||||||||||||||||| ||| |||||| ||||||||||| | ||||||||| |||||||||||  ||||||||||| || |||||     
T  20420777 tatttttgcggtttggtttggtttggttcgattgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 20420876  T
Q  452 aaaccaagtgcgattttttacggt 475  Q
     ||||||||||| |||||| ||||    
T  20420877 gaaccaagtgcggttttttgcggt 20420900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 34910367 - 34910478
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||||||| ||||||| ||||||||||| |||||| | |||||||         |||||||||||||||||||||||||||| |||||||    
T  34910367 caaaccaaaccaatgcggcttggattagttcggtttgtacggtttattgcgagataaaaaaaacattacattaactctaatattgccaatttgttacaaa 34910466  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  34910467 ataaacatagga 34910478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 352 - 475
Target Start/End: Complemental strand, 36413021 - 36412898
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| ||||||||||||||||||||||||| ||| |||||| ||||||||||| | ||||||||| | |||||||||  ||||||||||| || |||||     
T  36413021 tatttttgcggtttggtttggtttggttcgattgctgagatgcaaaccgcaaaccgaaccgaaccgcacggttcagtctaaaagtcatccgaactcatcc 36412922  T
Q  452 aaaccaagtgcgattttttacggt 475  Q
     ||||||||||| |||||| ||||    
T  36412921 gaaccaagtgcggttttttgcggt 36412898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 42785652 - 42785545
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||||||||||||||||||||| ||  |||||||| |||||||||        |||||||||||||||||||||||||| ||||||||||    
T  42785652 caaaccaaaccaatgcggtttggattggttcgattgatgcggtttatcgcgagataaaaaaa-tattacattaactctaatattgccaaattattacaaa 42785554  T
Q  103 ataaacata 111  Q
    |||||||||    
T  42785553 ataaacata 42785545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 25298279 - 25298169
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||| ||| |||||||||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||| || || ||||    
T  25298279 caaaccaaactaatacggtttggattggttcggtttgtgcggtttatcgcgagat-gaaaaaatattacattaactctaatattgccaacttgttgcaaa 25298181  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  25298180 ataaacatagga 25298169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 351 - 441
Target Start/End: Complemental strand, 42785191 - 42785101
Alignment:
Q  351 ttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatcc 441  Q
    |||||||| |||||||||||||||||||||||||  |||||| ||||||||||| ||||||||||| || |||||| ||||||||||||||    
T  42785191 ttattcttacggtttggtttggtttggttcggtttctgagatgcaaaccgcaaaccaaaccgaaccgcgtggttcaatgcaaaagtcatcc 42785101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 18356958 - 18357066
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||||||| |||||||||||| |||  |||||||| |||||||||        |||||||||||||||||||||||||| || |||||||    
T  18356958 caaaccaaaccaatgcggcttggattggttctgttgatgcggtttatcgcgagataaaaaaaatattacattaactctaatattgccaacttgttacaaa 18357057  T
Q  103 ataaacata 111  Q
    |||||||||    
T  18357058 ataaacata 18357066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 7 - 114
Target Start/End: Complemental strand, 17916880 - 17916773
Alignment:
Q  7 ccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaaataa 106  Q
    |||||||||||||| ||||||||||||||||||||| |||| |||||||||        |||||| ||||||||||| ||||||| || |||||||||||    
T  17916880 ccaaaccaatgcggcttggattggttcggtttgtgcagtttatcgcgagataaaaaaaatattacgttaactctaatgttgccaacttgttacaaaataa 17916781  T
Q  107 acatagga 114  Q
    ||||||||    
T  17916780 acatagga 17916773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 19937143 - 19937036
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||| ||||||||||||||||||||||||| ||| |||||||||| ||| |||||        |||||||||||||||||||||||||| || |||||||    
T  19937143 caaagcaaaccaatgcggtttggattggtttggtgtgtgcggtttatcgtgagatacaaaaa-tattacattaactctaatattgccaacttgttacaaa 19937045  T
Q  103 ataaacata 111  Q
    |||||||||    
T  19937044 ataaacata 19937036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 44035372 - 44035471
Alignment:
Q  5 aaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaaat 104  Q
    ||||||||||||| ||||| ||||||||||||||||| ||||| |||||||||        |||||||||||||||||||||||||| || |||||||||    
T  44035372 aaccaaaccaatggggttttgattggttcggtttgtgtggtttatcgcgagat--aaaaaatattacattaactctaatattgccaacttgttacaaaat 44035469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 111
Target Start/End: Original strand, 11375956 - 11376063
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||||||| |||||||| |||| |||||||||||| |||| ||||        |||| ||||||||||||||||| ||| || |||||||    
T  11375956 caaaccaaaccaatgcggattggattgattcgttttgtgcggtttatcgcaagat-aaaaaaatatttcattaactctaatattgtcaacttgttacaaa 11376054  T
Q  103 ataaacata 111  Q
    |||||||||    
T  11376055 ataaacata 11376063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 361 - 475
Target Start/End: Original strand, 41166625 - 41166739
Alignment:
Q  361 ggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatctaaaccaagt 460  Q
    ||||||||||||||||||||||||| | | ||  |||||||||| |||| | ||||  |||||| |||| |||||| |||  ||| |||| ||||||| |    
T  41166625 ggtttggtttggtttggttcggttggtaaaatgaaaaccgcaaaccaaatcaaaccatgcggttgagtgaaaaagtgatctgaatgcatccaaaccaaat 41166724  T
Q  461 gcgattttttacggt 475  Q
    ||| |||||||||||    
T  41166725 gcggttttttacggt 41166739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 357 - 541
Target Start/End: Original strand, 44085956 - 44086139
Alignment:
Q  357 ttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatctaaacc 456  Q
    ||||||||||||||||||||||||||||| ||| ||  ||||| |||| |||||| ||||  ||||||||| | |||| | |||  | | |||| |||||    
T  44085956 ttgcggtttggtttggtttggttcggttggtgaaatgaaaaccacaaaccaaaccaaaccatgcggttcagaggaaaa-taatctgattacatcaaaacc 44086054  T
Q  457 aagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacacccctaaa 541  Q
    || ||||||||||| | || ||  ||| | ||||||   |||||| ||||||| |||  |||||| | |||||||||| ||||||    
T  44086055 aaatgcgattttttgcagtttcagtttgggttaattcgatttacggtttttctattgggttgattcgattttaaacacacctaaa 44086139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 9811445 - 9811499
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat 57  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||||||||    
T  9811445 caaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagat 9811499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 16578700 - 16578754
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat 57  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||||||||    
T  16578700 caaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagat 16578754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 36413658 - 36413604
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat 57  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||||||||    
T  36413658 caaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagat 36413604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 41461141 - 41461185
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggttt 47  Q
    |||||||||||||||||||||||||||  |||||| |||||||||    
T  41461141 caaaccaaaccaatgcggtttggattgaatcggttggtgcggttt 41461185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 201; Significance: 1e-109; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 139 - 539
Target Start/End: Original strand, 43429378 - 43429778
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||||| ||||||||| ||| |||| ||| ||||||||||||||||||||||  || |    
T  43429378 aacttatatcaaaattggtaaaattaagaagaaatataagcatgaaactaattattggaaagtaaaggaaacaaattcatcattggaaatgaatcgaaag 43429477  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    |||||||||||||||||||| |||| ||||||| |||||||||||||||||||| |||||||||| |||||  ||||||||||||| | |||||| ||||    
T  43429478 agatggaaaggaattagaattgaacctgatggtgcaacaatggaaaaatcgaatcaaaagagatttttcttgagctatgtaattggacgagtacacgttt 43429577  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    |||||||| |  ||||||||||||||||||||||||||||||||||| |||||| ||||||||||| | |||||||||  |||||| |||||||||||||    
T  43429578 aagtaatagtcattattcttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccatgcggtttagtgcaaaagtca 43429677  T
Q  439 tccaaattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacacccct 538  Q
    ||| ||||||||  ||||||||||| |||||| |||| ||| ||| ||||  ||| |||| || ||||||| |||  ||| || |||||| |||||||||    
T  43429678 tccgaattcatccgaaccaagtgcggttttttgcggtttcggtttggattggtttggtttgcggtttttctattgggttggttcggttttgaacacccct 43429777  T
Q  539 a 539  Q
    |    
T  43429778 a 43429778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 183; E-Value: 2e-98
Query Start/End: Original strand, 139 - 488
Target Start/End: Original strand, 22366660 - 22366999
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||| |||||||||||| || |    
T  22366660 aacttatatcaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagtaaaggaaacaaattcatcactggaaatgaattgaaag 22366759  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||| |||||| |||||||||||||||  |||||||||||||||||||||| ||||    
T  22366760 agatggaaaggaattagaatcgaacctgatggtgcaacaatggaaaaaccgaattgaaagagattattcttgagctatgtaattgggctagtacatgttt 22366859  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
     |||||||||  ||||||||||||||||||||          ||||| | |||| ||||||||||| | |||| || | | ||||| |||||||||||||    
T  22366860 gagtaatattcattattcttgcggtttggttt----------ggttgctaagatgcaaaccgcaaaccgaaccaaatcgcacggtttagtgcaaaagtca 22366949  T
Q  439 tccaaattcatctaaaccaagtgcgattttttacggtatcgatttagatt 488  Q
    ||| ||||||||| ||||||||||| |||||| |||| ||||||| ||||    
T  22366950 tccgaattcatctgaaccaagtgcggttttttgcggtttcgatttggatt 22366999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 183; E-Value: 2e-98
Query Start/End: Original strand, 139 - 488
Target Start/End: Complemental strand, 24361166 - 24360819
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||| |||||||||||| || |    
T  24361166 aacttatatcaaaatatgtaaaattaagaagaaacataagcatgaaacaaattattgggaagtaaaggaaacaaattcatcactggaaatgaattgaaag 24361067  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    | |||||||||||||||||| |||| ||||||| |||||||| ||||||||||| ||||| ||||||||||  ||||||||||||||||||||||  |||    
T  24361066 aaatggaaaggaattagaattgaacttgatggtgcaacaatgaaaaaatcgaatcaaaagggattattcttgagctatgtaattgggctagtacatattt 24360967  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    |||||||| |  ||||||||||||||||||||||||||||||||||| |||||  |||||||  || | ||||||||   | ||||| ||||||||||||    
T  24360966 aagtaatagtcattattcttgcggtttggtttggtttggttcggttgctgagacgcaaaccg--aaccgaaccgaactgtgtggttctgtgcaaaagtca 24360869  T
Q  439 tccaaattcatctaaaccaagtgcgattttttacggtatcgatttagatt 488  Q
    ||| |||||||| |||||||||||| |||||| |||| ||| ||| ||||    
T  24360868 tccgaattcatccaaaccaagtgcggttttttgcggtttcggtttggatt 24360819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 177; E-Value: 6e-95
Query Start/End: Original strand, 139 - 538
Target Start/End: Original strand, 32823806 - 32824195
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||| ||| |||  ||| |||||||||| ||  |||||||| ||      
T  32823806 aacttatatcaaaataggtaaaattaagaagaaacataaacatgaagcaaattattggaaagtaaatgaaacaaattcatcagtgagaatgaattgaaat 32823905  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||| ||||||||||||  |||||||||||||||||||||| ||||    
T  32823906 agatggaaaggaattagaatcgaacctgatggtgcaacaatggaaaaatcgaatcaaaggagattattcttgagctatgtaattgggctagtacatgttt 32824005  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||  |||||| |||||||||||||          ||||| |||||| ||||||||||| | |||||||||  ||||||||||||||||| ||    
T  32824006 aagtaatattcattattcatgcggtttggttt----------ggttgctgagatgcaaaccgcaaaccgaaccgaaccgtgcggttcagtgcaaaagcca 32824095  T
Q  439 tccaaattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacacccct 538  Q
    ||| |||||||| |||||||||||| ||||||||||| ||||||| |||| ||||  |||  | ||||||| |||  ||| || ||||||||||||||||    
T  32824096 tccgaattcatccaaaccaagtgcggttttttacggtttcgatttggattgatttgatttgtggtttttctattgggttggttcggttttaaacacccct 32824195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 139 - 450
Target Start/End: Complemental strand, 31876514 - 31876208
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| |||||||||||||||||||||||||||||||||  |||||||||||| ||||| |||| ||| ||| |||||| ||||||||||||||| |    
T  31876514 aacttatatcaaaataggtaaaattaagaagaaacataagcaaaaaacaaattatttggaagtaaaggaaacaaagtcatcactggaaatgaattaaaag 31876415  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    ||||||||| ||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||| ||||    
T  31876414 agatggaaaagaattagaatcgaatctgatggtgcaacaatggaaaaatcgaattaaaagagattattcttgagctatgtaactgggctagtacatgttt 31876315  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||  ||||| |||||||||||||||||||||||     | |||||| ||||||||||| |||| |||||| | ||||||| |||||||||||    
T  31876314 aagtaatattcattatttttgcggtttggtttggtttggtt-----gctgagatgcaaaccgcaaaccaaatcgaaccgcacggttcattgcaaaagtca 31876220  T
Q  439 tccaaattcatc 450  Q
    ||| ||||||||    
T  31876219 tccgaattcatc 31876208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 174; E-Value: 4e-93
Query Start/End: Original strand, 139 - 475
Target Start/End: Original strand, 13852518 - 13852852
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||| ||| |||||||||| || ||||||||| || |    
T  13852518 aacttatatcaaaataggtaaagttaagaagaaacataagcatgaaacaaattattggaaagtaaaggaaacaaattcatcactgtaaatgaattgaaag 13852617  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    |||||||||||||||| |||||||| ||||||||  |||||| ||||||||||| ||||||||||||||||  |||||||||||| | |||||||  |||    
T  13852618 agatggaaaggaattataatcgaacctgatggta--acaatgaaaaaatcgaatcaaaagagattattcttgagctatgtaattgagttagtacatattt 13852715  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    || |||||||  |||||||||| ||||||||||||||||||| |||| |||||| |||||||||||   ||||||||| | |||||||||||||||||||    
T  13852716 aaataatattcattattcttgcagtttggtttggtttggttcagttgctgagatgcaaaccgcaaacagaaccgaaccactcggttcagtgcaaaagtca 13852815  T
Q  439 tccaaattcatctaaaccaagtgcgattttttacggt 475  Q
    ||| ||||||||  ||||||||||  |||||| ||||    
T  13852816 tccgaattcatccgaaccaagtgctgttttttgcggt 13852852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 165; E-Value: 9e-88
Query Start/End: Original strand, 142 - 539
Target Start/End: Complemental strand, 36921423 - 36921029
Alignment:
Q  142 ttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaaggaga 241  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||  ||| ||||| ||||||| ||||||||| || ||||    
T  36921423 ttatatcaaaataggtaaaattaagaagaaacataagtatgaaacaaattattgggaagtaaaagaaacaaatttatcattgaaaatgaattgaaagaga 36921324  T
Q  242 tggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaatt--gggctagtacaagttta 339  Q
    |||||| ||||||||||||||| ||||||| |||||||| ||||||||||| ||||| ||||||||||  |||||||||||  ||| ||||||| |||||    
T  36921323 tggaaaagaattagaatcgaacctgatggtgcaacaatgaaaaaatcgaatcaaaagcgattattcttgagctatgtaattgggggttagtacatgttta 36921224  T
Q  340 agtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcat 439  Q
    |||||||||  ||||||||||     |||||||||||||||||||| |||||| ||||| ||||| ||||||||||| || |||||| ||||||||| ||    
T  36921223 agtaatattcattattcttgc-----ggtttggtttggttcggttgctgagatgcaaactgcaaaccaaaccgaaccgcgtggttcaatgcaaaagtaat 36921129  T
Q  440 ccaaattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacaccccta 539  Q
    || ||||||||  ||||||||||| ||||||   || ||| ||| ||||  ||| |||| || ||||||| |||  ||| || |||||| ||||||||||    
T  36921128 ccgaattcatccgaaccaagtgcggttttttgtagtttcggtttggattggtttggtttgcggtttttctattgggttggttcggttttgaacaccccta 36921029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 222 - 540
Target Start/End: Complemental strand, 42910466 - 42910153
Alignment:
Q  222 tggaaatgaattaaaggagatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaat 321  Q
    |||||||||||| || ||||||||||||||||||||||| || ||||||| |||||||||||||||| ||| ||||||||||||||||  ||||||||||    
T  42910466 tggaaatgaattgaaagagatggaaaggaattagaatcggacctgatggtgcaacaatggaaaaatcaaatcaaaagagattattcttgagctatgtaat 42910367  T
Q  322 tgggctagtacaagtttaagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcg 421  Q
    |||||||||||| ||||||||||||||  ||||||||||||||||||||     |||||||||| |||||| ||||||||||| | ||||||||| | ||    
T  42910366 tgggctagtacatgtttaagtaatattcattattcttgcggtttggttt-----ggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcacg 42910272  T
Q  422 gttcagtgcaaaagtcatccaaattcatctaaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatt 521  Q
    |||||||||||||||||||| ||||||||  ||||||||||| |||||| | || ||||||| ||||  ||| |||| || ||||||| |||  ||| ||    
T  42910271 gttcagtgcaaaagtcatccgaattcatccgaaccaagtgcggttttttgcagtttcgatttggattggtttggtttgcggtttttctattgggttggtt 42910172  T
Q  522 tggttttaaacacccctaa 540  Q
     |||||| |||||||||||    
T  42910171 cggttttgaacacccctaa 42910153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 182 - 488
Target Start/End: Original strand, 10069816 - 10070112
Alignment:
Q  182 gaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaaggagatggaaaggaattagaatcgaacgtgatggtacaacaatgg 281  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||| |||||||||    
T  10069816 gaaacaaattattgggaagaaaaggaaacaaattcatcattggaaatgaattgaaggagatggaaaggaattagaatcaaacctgatggtgcaacaatgg 10069915  T
Q  282 aaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaagtaatatttcttattcttgcggtttggtttggtttggttcg 381  Q
    ||||||| ||| |||| ||||||||||| ||||||||||||||||  ||||||||||||||||||||  ||||||||||||||||||||          |    
T  10069916 aaaaatcaaatcaaaaaagattattcttgggctatgtaattgggccggtacaagtttaagtaatattgattattcttgcggtttggttt----------g 10070005  T
Q  382 gttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatctaaaccaagtgcgattttttacggtatcgat 481  Q
    |||| |||||| |||| |||||| | ||| ||||   ||||||||||||||||||||||| ||||||||  ||||||||||| |||||| |||| ||| |    
T  10070006 gttgctgagatgcaaatcgcaaaccgaactgaactgtgcggttcagtgcaaaagtcatccgaattcatccgaaccaagtgcggttttttgcggtttcggt 10070105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 139 - 488
Target Start/End: Original strand, 47903444 - 47903778
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||| |||||||||| |||||||||||| || |    
T  47903444 aacttatatgaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaaataaaggaaacaaattcatcactggaaatgaattgaaag 47903543  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    | ||||||| |||||| |||||||| ||||||| |||||||| |||||||||||  ||| | | |||||||  ||||||||||| ||||||             
T  47903544 atatggaaatgaattataatcgaacctgatggtgcaacaatgaaaaaatcgaatcgaaaaatagtattcttgagctatgtaatttggctag--------- 47903634  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
          ||||  ||||||||| ||||||| ||| ||||||||||||| |||||| ||||||||||| | || |||||  |||||||||||||||||||||    
T  47903635 ------tattcattattcttgtggtttgggttgttttggttcggttgctgagatgcaaaccgcaaaccgaaacgaactgcgcggttcagtgcaaaagtca 47903728  T
Q  439 tccaaattcatctaaaccaagtgcgattttttacggtatcgatttagatt 488  Q
    ||| ||||||||  ||||||||||| |||||| |||| ||| ||||||||    
T  47903729 tccgaattcatccgaaccaagtgcggttttttgcggtttcggtttagatt 47903778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 142 - 385
Target Start/End: Original strand, 48675325 - 48675568
Alignment:
Q  142 ttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaaggaga 241  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||| ||| |||||||||| || ||||||||| || ||||    
T  48675325 ttatatcaaaataggtaaaattaagaagaaacataaacatgaaacaaattattaggaagtaaaggaaacaaattcatcactgaaaatgaattcaaagaga 48675424  T
Q  242 tggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaag 341  Q
    |||||| ||||||||||| ||| ||||||| ||||||||||| |||| ||  ||||||| ||||| ||  ||||||||||| ||||| |||| |||||||    
T  48675425 tggaaatgaattagaatcaaacctgatggtgcaacaatggaataatcaaaccaaaagaggttattttttagctatgtaattaggctaatacatgtttaag 48675524  T
Q  342 taatatttcttattcttgcggtttggtttggtttggttcggttg 385  Q
    |||||||| |||||||| ||||||| ||| ||||||||| ||||    
T  48675525 taatatttattattcttacggtttgattttgtttggttcagttg 48675568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 118 - 475
Target Start/End: Complemental strand, 31982543 - 31982208
Alignment:
Q  118 ctaaccagattaaaatcaaacaa--cttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaatt 215  Q
    ||||||| ||||||| |||||||  |||||| |||||||  |||||||||||||||| |||| ||||||||||||||||||||||||||| ||| |||||    
T  31982543 ctaaccaaattaaaaccaaacaaaacttatatcaaaatatttaaaattaagaagaaatataaacatgaaacaaattattgggaagaaaaggaaacaaatt 31982444  T
Q  216 catcattggaaatgaattaaaggagatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggcta 315  Q
    ||||| || |||||||              |||||||||||||||||  ||||||| |||||||||||||||| ||| |||||||||||||||| |||||    
T  31982443 catcactgaaaatgaa--------------aaggaattagaatcgaatttgatggtgcaacaatggaaaaatcaaatcaaaagagattattcttgggcta 31982358  T
Q  316 tgtaattgggctagtacaagtttaagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaac 415  Q
    |||||||||||| |||||| |||||||||||||  ||||| ||||||||||||||          ||||| | |||| |||||||||||||||||| |||    
T  31982357 tgtaattgggctggtacaaatttaagtaatattgattatttttgcggtttggttt----------ggttgctaagatgcaaaccgcaaatcaaaccaaac 31982268  T
Q  416 ctcgcggttcagtgcaaaagtcatccaaattcatctaaaccaagtgcgattttttacggt 475  Q
    | ||| |||||||||||||||||||  ||||||||  || |||||||  |||||| ||||    
T  31982267 cgcgcagttcagtgcaaaagtcatctgaattcatccgaatcaagtgcagttttttgcggt 31982208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 257 - 541
Target Start/End: Complemental strand, 27054483 - 27054198
Alignment:
Q  257 atcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaagtaatatttcttattc 356  Q
    ||||||| ||||||| |||||||| ||||||||||| ||||||||||||||||  | ||||||||||||||||||||  |||||||||||||  ||||||    
T  27054483 atcgaacatgatggtgcaacaatgaaaaaatcgaatcaaaagagattattcttgagttatgtaattgggctagtacatatttaagtaatattcattattc 27054384  T
Q  357 ttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcat-ctaaac 455  Q
    ||| ||||||||||||||||||||| ||| ||| || ||||||||||| |||||| || | | ||||| |||||||||||||||  ||||||| | ||||    
T  27054383 ttgtggtttggtttggtttggttcgattgctgatatgcaaaccgcaaaccaaaccaaatcgcacggtttagtgcaaaagtcatctgaattcatccgaaac 27054284  T
Q  456 caagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacacccctaaa 541  Q
    |||||||| ||||||||||| ||| ||| ||||  ||| |||| || ||||||| |||  |  ||| |||||| ||||||||||||    
T  27054283 caagtgcggttttttacggtttcggtttggattggtttggtttgcggtttttctattgggtacattcggttttgaacacccctaaa 27054198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 266 - 470
Target Start/End: Complemental strand, 18672966 - 18672762
Alignment:
Q  266 gatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagtttaagtaatatttcttattcttgcggttt 365  Q
    |||||| ||||||| |||||||| ||| |||||||||||||| |  |||||||||||||||||||||||||||||||||||||  ||||| |||||||||    
T  18672966 gatggtgcaacaatagaaaaatctaatcaaaagagattattcctgtgctatgtaattgggctagtacaagtttaagtaatattgattattattgcggttt 18672867  T
Q  366 ggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatctaaaccaagtgcgat 465  Q
    |||||||||||||||||||| |||||| |||||| |||| | ||||||||  |||||| || ||||||| |||||| ||||||||| ||| || |||| |    
T  18672866 ggtttggtttggttcggttgctgagatgcaaaccacaaaccgaaccgaactgcgcggtccaatgcaaaaatcatccgaattcatctgaactaaatgcggt 18672767  T
Q  466 ttttt 470  Q
    |||||    
T  18672766 ttttt 18672762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 3 - 244
Target Start/End: Complemental strand, 18673218 - 18672962
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||| ||||| || |||||||||||||||| ||||||||| |||||||||        |||||||||||||||||||||| ||| || || ||||    
T  18673218 caaaccaaaacaatgtggcttggattggttcggttggtgcggtttatcgcgagataaaaaa--tattacattaactctaatattgacaacttgttccaaa 18673121  T
Q  103 ataaacataggagttctaaccagattaaaat---------------caaacaa--cttataacaaaataggtaaaattaagaagaaacataagcatgaaa 185  Q
    ||||||||||||||||||||||||||||||                |||||||  |||||| ||||||| ||||||||||||||||||||||||||||||    
T  18673120 ataaacataggagttctaaccagattaaaactaacgagattaaaaccaaacaaaacttatatcaaaataagtaaaattaagaagaaacataagcatgaaa 18673021  T
Q  186 caaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaaggagatgg 244  Q
    ||||||||| |||||||||| ||| |||||||||| |||||||||||| ||||||||||    
T  18673020 caaattatttggaagaaaaggaaacaaattcatcaatggaaatgaattgaaggagatgg 18672962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 139 - 470
Target Start/End: Original strand, 5932854 - 5933159
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| ||||||| ||||||||||||||||||||||||| |||| |||||||| | ||| |||| ||| |||||||||| || |||||             
T  5932854 aacttatatcaaaatatgtaaaattaagaagaaacataagcaagaaataaattattagaaagtaaaggaaacaaattcatcactgaaaatg--------- 5932944  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
               |||||||||| ||  ||||||| |||||||||||||||||     |||||||||||||||  |||||||||||||||||||||| ||||    
T  5932945 -----------aattagaatcaaatctgatggtgcaacaatggaaaaatcg-----aaagagattattcttgagctatgtaattgggctagtacatgttt 5933028  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgca-----aatcaaaccgaacctcgcggttcagtgcaaa 433  Q
    |||| |      |||||||| || ||||||||||||||||||||||| ||||||||||||||||     || | ||||||||| ||||||||||||||||    
T  5933029 aagtca------ttattcttacgatttggtttggtttggttcggttgctgagatacaaaccgcaaaccgaaccgaaccgaaccgcgcggttcagtgcaaa 5933122  T
Q  434 agtcatccaaattcatctaaaccaagtgcgatttttt 470  Q
    |||||||  |||| |||  ||||||||||| ||||||    
T  5933123 agtcatctgaatttatccgaaccaagtgcggtttttt 5933159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 352 - 539
Target Start/End: Original strand, 47070027 - 47070214
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||||| |||||||||||  ||||||||||| || |||||     
T  47070027 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 47070126  T
Q  452 aaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacaccccta 539  Q
     ||||||||||| |||||| |||| ||| ||| ||||  ||  |||| || ||||||| |||  ||| ||||||||| ||||||||||    
T  47070127 gaaccaagtgcggttttttgcggtttcggtttggattggttcggtttgcggtttttctattgggttggtttggttttgaacaccccta 47070214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 352 - 483
Target Start/End: Complemental strand, 3211866 - 3211735
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||||| |||||||||||  ||||||||||| || |||||     
T  3211866 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 3211767  T
Q  452 aaaccaagtgcgattttttacggtatcgattt 483  Q
     ||||||||||| |||||| |||| |||||||    
T  3211766 gaaccaagtgcggttttttgcggtttcgattt 3211735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 352 - 539
Target Start/End: Original strand, 10672178 - 10672365
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||||| | |||||||||  ||||||||||| || |||||     
T  10672178 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcacggttcagtctaaaagtcatccgaactcatcc 10672277  T
Q  452 aaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacaccccta 539  Q
     ||||||||||| |||||| |||| ||| ||| ||||  ||  |||| || ||||||| |||  ||| ||||||||| ||||||||||    
T  10672278 gaaccaagtgcggttttttgcggtttcggtttggattggttcggtttgcggtttttctattgggttggtttggttttgaacaccccta 10672365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 118 - 263
Target Start/End: Original strand, 36508876 - 36509024
Alignment:
Q  118 ctaaccagattaaaatcaaacaa--cttataacaaaa-taggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaat 214  Q
    ||||||||||||||| |||||||  |||||| ||||| ||| ||||||||||||||| ||||||| ||||||||||||||||| ||||||| ||| ||||    
T  36508876 ctaaccagattaaaaccaaacaaaacttatatcaaaaatagataaaattaagaagaagcataagcctgaaacaaattattggggagaaaaggaaacaaat 36508975  T
Q  215 tcatcattggaaatgaattaaaggagatggaaaggaattagaatcgaac 263  Q
    ||||||  | |||| |||| |||||||||||||| || |||||||||||    
T  36508976 tcatcaccgaaaattaattgaaggagatggaaagcaaatagaatcgaac 36509024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 32823658 - 32823767
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||| || |||||||    
T  32823658 caaaccaaatcaatgcggtttggattggttcggtttgtgcggtttatcgcgagat--aaaaaatattacattaactctaatattgccaacttgttacaaa 32823755  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  32823756 ataaacatagga 32823767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 27054760 - 27054652
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||        ||||||||||||||||||||| |||| || |||||||    
T  27054760 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttatcacgagataaaaaaaatattacattaactctaatatttccaacttgttacaaa 27054661  T
Q  103 ataaacata 111  Q
    |||||||||    
T  27054660 ataaacata 27054652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 22366510 - 22366620
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||||||| ||||||||||| |||||||||||||| |||| ||||         |||||||||||||||||||||||||||| |||||||    
T  22366510 caaaccaaaccaatgcggcttggattggtttggtttgtgcggtttatcgcaagataaaaaaaa-attacattaactctaatattgccaatttgttacaaa 22366608  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  22366609 ataaacatagga 22366620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 24361316 - 24361206
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||| |||||||||||||||||||||||||||||||||| || ||||||        |||||||||||||||||||||| ||| || |||||||    
T  24361316 caaaccaaactaatgcggtttggattggttcggtttgtgcggtttatcacgagat-aaaaaaatattacattaactctaatattgtcaacttgttacaaa 24361218  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  24361217 ataaacatagga 24361206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 24361522 - 24361412
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||  |||||        |||||||||||||||||||||| ||| || |||||||    
T  24361522 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttatcatgagat-aaaaaaatattacattaactctaatattgtcaacttgttacaaa 24361424  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  24361423 ataaacatagga 24361412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 366 - 539
Target Start/End: Complemental strand, 8768376 - 8768203
Alignment:
Q  366 ggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatctaaaccaagtgcgat 465  Q
    |||||||||||||||||||| |||||| |||||| |||| | ||||||||| |||||||||||  ||||||||||| || |||||  ||||||||||| |    
T  8768376 ggtttggtttggttcggttgctgagatgcaaaccacaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtgcggt 8768277  T
Q  466 tttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacaccccta 539  Q
    ||||| |||| ||| ||| ||||  ||  |||| || ||||||| |||  ||| || |||||| ||||||||||    
T  8768276 tttttgcggtttcggtttggattggttcggtttgcggtttttctattgggttggttcggttttgaacaccccta 8768203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 371 - 539
Target Start/End: Complemental strand, 11206083 - 11205915
Alignment:
Q  371 ggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatctaaaccaagtgcgatttttt 470  Q
    ||||||||||||||| |||||| ||||||||||| | ||||||||| |||||||||||  ||||||||||| || |||||  ||||||||||| ||||||    
T  11206083 ggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatccgaaccaagtgcggtttttt 11205984  T
Q  471 acggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacaccccta 539  Q
     |||| ||| ||| ||||  ||  |||| || ||||||| |||  ||| || |||||| ||||||||||    
T  11205983 gcggtttcggtttggattggttcggtttgcggtttttctattgggttggttcggttttgaacaccccta 11205915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 352 - 540
Target Start/End: Original strand, 12117959 - 12118147
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| ||||||||| ||||||||||||| ||||| |||||| |||| |||||| | ||||||||| |||||||||||  ||||||||||| || |||||     
T  12117959 tatttttgcggtttagtttggtttggtttggttgctgagatgcaaatcgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatccgaactcatcc 12118058  T
Q  452 aaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacacccctaa 540  Q
     ||||||||| | |||||||| || ||| ||| | || |||  |||| || ||||||| |||  ||| || |||||| |||||||||||    
T  12118059 gaaccaagtgtggttttttacagtttcggtttgggttgattcggtttgcggtttttctattgggttggttcggttttgaacacccctaa 12118147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 352 - 440
Target Start/End: Complemental strand, 47204181 - 47204093
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatc 440  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||||| |||||||||||  ||||||||||    
T  47204181 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcatc 47204093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 48675171 - 48675282
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||| |||||||| |||||| ||||||||||||||||||| |||||||||        ||||| |||||||||||||||| |||||| |||||||    
T  48675171 caaaccaaatcaatgcggcttggatcggttcggtttgtgcggtttatcgcgagataaaaaaaatattatattaactctaatattgtcaatttgttacaaa 48675270  T
Q  103 ataaacatagga 114  Q
    ||||| ||||||    
T  48675271 ataaatatagga 48675282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 8 - 114
Target Start/End: Complemental strand, 31876658 - 31876554
Alignment:
Q  8 caaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaaataaa 107  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||||        |||||||||||||||||||||||||| || |||||||||||     
T  31876658 caaaccaatgcggtttggattggttcaatttgtgcggtttatcgcgagat--aaaaaatattacattaactctaatattgccaacttgttacaaaataat 31876561  T
Q  108 catagga 114  Q
    |||||||    
T  31876560 catagga 31876554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 31983024 - 31982912
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnn-tattacattaactctaatattgccaatttattacaa 101  Q
    ||||||||||||| | || |||||||||||||||| ||||||||| | |||||||         |||||||||||||||||||||||||| |||||||||    
T  31983024 caaaccaaaccaacgtgggttggattggttcggttggtgcggtttattgcgagataaaaaaatatattacattaactctaatattgccaacttattacaa 31982925  T
Q  102 aataaacatagga 114  Q
    |||||||||||||    
T  31982924 aataaacatagga 31982912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 1335377 - 1335487
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||| |||||||| ||||||| |||||||| ||||||||| |||| || |        |||||||||||||||||||||||||| ||||||||||    
T  1335377 caaaccaaatcaatgcggcttggattagttcggttggtgcggtttatcgcaag-ttaaaaaaatattacattaactctaatattgccaacttattacaaa 1335475  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  1335476 ataaacatagga 1335487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 13852368 - 13852478
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| || ||||||        |||||||||||||| ||||||| ||| ||  ||||||    
T  13852368 caaaccaaaccaatgcggtttggattggttcggtttgtgaggtttatcacgagat-aaaaaaatattacattaactccaatattgtcaacttggtacaaa 13852466  T
Q  103 ataaacatagga 114  Q
    ||||||||||||    
T  13852467 ataaacatagga 13852478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 311 - 470
Target Start/End: Original strand, 36509028 - 36509173
Alignment:
Q  311 ggctatgtaattgggctagtacaagtttaagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaac 410  Q
    ||||||||||||||||| |||||| |||||||||||||  ||||||||||          ||||||||||| ||| ||    |||||||||||| |||||    
T  36509028 ggctatgtaattgggctcgtacaaatttaagtaatattgattattcttgc----------ggtttggttcgattgctg----acaaaccgcaaaccaaac 36509113  T
Q  411 cgaacctcgcggttcagtgcaaaagtcatccaaattcatctaaaccaagtgcgatttttt 470  Q
    |||||| | ||||||| ||||||||||||   ||||||||  ||||||||||| ||||||    
T  36509114 cgaaccgcacggttcaatgcaaaagtcatatgaattcatccgaaccaagtgcggtttttt 36509173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 114
Target Start/End: Original strand, 43429253 - 43429338
Alignment:
Q  28 tggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaaataaacatagga 114  Q
    ||||| |||||||||||||| |||||||||        |||||||||||||||||||||||||| || |||||||||||||||||||    
T  43429253 tggttgggtttgtgcggtttatcgcgagataaaaaaa-tattacattaactctaatattgccaacttgttacaaaataaacatagga 43429338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 5932766 - 5932814
Alignment:
Q  66 tattacattaactctaatattgccaatttattacaaaataaacatagga 114  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||    
T  5932766 tattacattaactctaatattgccaacttgttacaaaataaacatagga 5932814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 110
Target Start/End: Original strand, 10069327 - 10069371
Alignment:
Q  66 tattacattaactctaatattgccaatttattacaaaataaacat 110  Q
    |||||||||||||||||||||||||| || |||||||||||||||    
T  10069327 tattacattaactctaatattgccaacttgttacaaaataaacat 10069371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 357 - 509
Target Start/End: Original strand, 40849325 - 40849477
Alignment:
Q  357 ttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatctaaacc 456  Q
    ||||||||||||||||||||||||||||| | | ||  |||||||||| |||||| ||||  |||||| |||  |||||| |||| ||| |||| ||| |    
T  40849325 ttgcggtttggtttggtttggttcggttggtaaaatgaaaaccgcaaaccaaaccaaaccatgcggttgagtaaaaaagtgatccgaatacatccaaatc 40849424  T
Q  457 aagtgcgattttttacggtatcgatttagattaatttagtttacgatttttct 509  Q
    || || | |||||| |||| ||| ||| | ||| || ||||| || |||||||    
T  40849425 aaatgtggttttttgcggtttcggtttgggttagttcagtttgcggtttttct 40849477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 413 - 488
Target Start/End: Original strand, 1335884 - 1335959
Alignment:
Q  413 aacctcgcggttcagtgcaaaagtcatccaaattcatctaaaccaagtgcgattttttacggtatcgatttagatt 488  Q
    |||| ||||||| |||||||||||||||  |||||||| |||||||||||| |||||| |||| | ||||| ||||    
T  1335884 aaccgcgcggtttagtgcaaaagtcatctgaattcatccaaaccaagtgcggttttttgcggttttgatttggatt 1335959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 2408988 - 2408945
Alignment:
Q  4 aaaccaaaccaatgcggtttggattggttcggtttgtgcggttt 47  Q
    |||||||| |||||||||||||||||||| ||||||||||||||    
T  2408988 aaaccaaatcaatgcggtttggattggtttggtttgtgcggttt 2408945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 10069763 - 10069821
Alignment:
Q  118 ctaaccagattaaaatcaaacaa--cttataacaaaataggtaaaattaagaagaaaca 174  Q
    |||||||| ||||| ||||||||  |||||| |||||||||||||||||||||||||||    
T  10069763 ctaaccaggttaaattcaaacaaaacttatatcaaaataggtaaaattaagaagaaaca 10069821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 3213240 - 3213186
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat 57  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||||||||    
T  3213240 caaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagat 3213186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 11206386 - 11206332
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat 57  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||||||||    
T  11206386 caaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagat 11206332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 12117659 - 12117713
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat 57  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||||||||    
T  12117659 caaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagat 12117713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 47069733 - 47069787
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat 57  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||||||||    
T  47069733 caaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagat 47069787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 357 - 458
Target Start/End: Complemental strand, 524484 - 524383
Alignment:
Q  357 ttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatctaaacc 456  Q
    ||||||||||||||||||||||||||||| | | ||  |||||||||| |||||| ||||  |||||| ||   |||||| |||| ||| |||| |||||    
T  524484 ttgcggtttggtttggtttggttcggttggtaaaatgaaaaccgcaaaccaaaccaaaccatgcggttgagcaaaaaagtgatccgaatacatccaaacc 524385  T
Q  457 aa 458  Q
    ||    
T  524384 aa 524383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 33
Target Start/End: Original strand, 10671885 - 10671915
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttc 33  Q
    |||||||||||||||||||||||||||||||    
T  10671885 caaaccaaaccaatgcggtttggattggttc 10671915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 36508001 - 36508035
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtt 37  Q
    |||||||||||||||||| ||||||||||||||||    
T  36508001 caaaccaaaccaatgcggcttggattggttcggtt 36508035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 7760226 - 7760271
Alignment:
Q  66 tattacattaactctaatattgccaatttattacaaaataaacata 111  Q
    |||| ||||||||||||||||||| | || ||||||||||||||||    
T  7760226 tatttcattaactctaatattgccgacttgttacaaaataaacata 7760271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 215
Target Start/End: Complemental strand, 27054590 - 27054549
Alignment:
Q  174 ataagcatgaaacaaattattgggaagaaaagaaaataaatt 215  Q
    ||||||||||||||||||||||||||| |||| ||| |||||    
T  27054590 ataagcatgaaacaaattattgggaagtaaaggaaacaaatt 27054549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 458
Target Start/End: Original strand, 29628680 - 29628781
Alignment:
Q  357 ttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatctaaacc 456  Q
    ||||||||||||||||||||||||||||| | | ||  ||| |||||| |||||| ||||  |||||| ||   |||||| |||| ||| |||| |||||    
T  29628680 ttgcggtttggtttggtttggttcggttggtaaaatgaaaatcgcaaaccaaaccaaaccatgcggttaaggaaaaaagtgatccgaatacatccaaacc 29628779  T
Q  457 aa 458  Q
    ||    
T  29628780 aa 29628781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 47903356 - 47903401
Alignment:
Q  66 tattacattaactctaatattgccaatttattacaaaataaacata 111  Q
    |||||| ||||||||||||||||||  || ||||||||||||||||    
T  47903356 tattactttaactctaatattgccaggttgttacaaaataaacata 47903401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 180; Significance: 1e-96; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 180; E-Value: 1e-96
Query Start/End: Original strand, 139 - 470
Target Start/End: Complemental strand, 40447 - 40116
Alignment:
Q  139 aacttataacaaaataggtaaaattaagaagaaacataagcatgaaacaaattattgggaagaaaagaaaataaattcatcattggaaatgaattaaagg 238  Q
    |||||||| |||||||  ||||||||||||||||||||||||| ||||||||||| |||||| |||| |||||||||||||| | |||||||||| || |    
T  40447 aacttatatcaaaataaataaaattaagaagaaacataagcattaaacaaattatggggaagtaaagtaaataaattcatcacttgaaatgaattgaaag 40348  T
Q  239 agatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagagattattcttaggctatgtaattgggctagtacaagttt 338  Q
    |||||||||  ||||||||| |||| ||||| | |||||||||| |||| |||| |||||| |||||||||  |||||||||||||||||||| | ||||    
T  40347 agatggaaataaattagaatggaacctgatgttgcaacaatggacaaattgaatcaaaagaaattattcttgagctatgtaattgggctagtagatgttt 40248  T
Q  339 aagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtca 438  Q
    ||||||||||  ||||||||| ||||||||||||||||||||||||||||||||  ||||| |||| |||||||| || |||||||||||||||||||||    
T  40247 aagtaatattcattattcttgtggtttggtttggtttggttcggttgttgagatgaaaaccacaaaccaaaccgagccacgcggttcagtgcaaaagtca 40148  T
Q  439 tccaaattcatctaaaccaagtgcgatttttt 470  Q
    ||| ||||||||  ||||||||||| ||||||    
T  40147 tccgaattcatccgaaccaagtgcggtttttt 40116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 202 - 470
Target Start/End: Complemental strand, 47580 - 47312
Alignment:
Q  202 aaagaaaataaattcatcattggaaatgaattaaaggagatggaaaggaattagaatcgaacgtgatggtacaacaatggaaaaatcgaattaaaagaga 301  Q
    |||| ||| |||||||||| | |||||||||| || ||||||||||  ||||||||| |||| ||||| | |||||||||| ||||||||| |||||| |    
T  47580 aaagtaaacaaattcatcacttgaaatgaattgaaagagatggaaataaattagaatggaacctgatgttgcaacaatggacaaatcgaatcaaaagaaa 47481  T
Q  302 ttattcttaggctatgtaattgggctagtacaagtttaagtaatatttcttattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgc 401  Q
    ||||||||  |||||||||||||||||||| | ||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||  ||||| |    
T  47480 ttattcttgagctatgtaattgggctagtagatgtttaagtaatattcattattcttgtggtttggtttggtttggttcggttgttgagatgaaaaccac 47381  T
Q  402 aaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatctaaaccaagtgcgatttttt 470  Q
    ||| |||||||| ||  ||||||||||||||||||||||| ||||||||  ||||||||||| ||||||    
T  47380 aaaccaaaccgagccatgcggttcagtgcaaaagtcatccgaattcatccgaaccaagtgcggtttttt 47312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 40598 - 40491
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagatnnnnnnnntattacattaactctaatattgccaatttattacaaa 102  Q
    |||||||||||||||||||||||||||||||| | |||||||||| |||||||||        ||||||||| ||||||||||| |||| || |||||||    
T  40598 caaaccaaaccaatgcggtttggattggttcgatatgtgcggtttatcgcgagat-aaaaaaatattacattgactctaatattaccaacttgttacaaa 40500  T
Q  103 ataaacata 111  Q
    |||||||||    
T  40499 ataaacata 40491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 65; Significance: 4e-28; HSPs: 2)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 352 - 540
Target Start/End: Complemental strand, 5577 - 5389
Alignment:
Q  352 tattcttgcggtttggtttggtttggttcggttgttgagatacaaaccgcaaatcaaaccgaacctcgcggttcagtgcaaaagtcatccaaattcatct 451  Q
    |||| ||||||||||||||||||||||||||||| |||||| ||||||||||| | ||||||||| |||||||||||  ||||||||| | || |||||     
T  5577 tatttttgcggtttggtttggtttggttcggttgctgagatgcaaaccgcaaaccgaaccgaaccgcgcggttcagtctaaaagtcattcgaactcatcc 5478  T
Q  452 aaaccaagtgcgattttttacggtatcgatttagattaatttagtttacgatttttctgttgacttgatttggttttaaacacccctaa 540  Q
     |||||| |||| |||||| |||| ||| ||||| ||  ||  |||| || ||||||| |||  ||| || |||||| |||||||||||    
T  5477 gaaccaaatgcggttttttgcggtttcggtttaggttggttcggtttgcggtttttctattgggttggttcggttttgaacacccctaa 5389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 5911 - 5857
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgcggtttgtcgcgagat 57  Q
    ||||||||||||||||||||||||||||||| |||  |||||||  |||||||||    
T  5911 caaaccaaaccaatgcggtttggattggttcagttgatgcggttaatcgcgagat 5857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 6060 - 6099
Alignment:
Q  3 caaaccaaaccaatgcggtttggattggttcggtttgtgc 42  Q
    ||||||||||||||||||||||| |||| |||||||||||    
T  6060 caaaccaaaccaatgcggtttgggttggatcggtttgtgc 6099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University