View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8957_low_36 (Length: 451)

Name: NF8957_low_36
Description: NF8957
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8957_low_36
NF8957_low_36
[»] chr7 (40 HSPs)
chr7 (161-432)||(31438977-31439248)
chr7 (161-383)||(31541068-31541290)
chr7 (161-383)||(33305109-33305331)
chr7 (172-412)||(31608277-31608517)
chr7 (161-395)||(31576034-31576268)
chr7 (161-395)||(31604700-31604934)
chr7 (170-395)||(31585444-31585669)
chr7 (173-412)||(31614558-31614797)
chr7 (172-395)||(31618304-31618527)
chr7 (170-412)||(31595074-31595316)
chr7 (161-368)||(31572801-31573007)
chr7 (244-412)||(31532416-31532584)
chr7 (126-161)||(2751438-2751473)
chr7 (126-161)||(16374161-16374196)
chr7 (126-161)||(22120055-22120090)
chr7 (126-161)||(28089986-28090021)
chr7 (126-161)||(40542909-40542944)
chr7 (127-161)||(3851924-3851958)
chr7 (127-161)||(7275444-7275478)
chr7 (126-160)||(27312320-27312354)
chr7 (127-161)||(31712902-31712936)
chr7 (126-159)||(11998018-11998051)
chr7 (127-160)||(18044275-18044308)
chr7 (127-160)||(41907514-41907547)
chr7 (127-159)||(17196950-17196982)
chr7 (128-160)||(32849759-32849791)
chr7 (126-161)||(654704-654739)
chr7 (126-161)||(7175861-7175896)
chr7 (126-161)||(13332433-13332468)
chr7 (126-161)||(21217832-21217867)
chr7 (126-161)||(21835318-21835353)
chr7 (126-161)||(22299969-22300004)
chr7 (128-159)||(22638457-22638488)
chr7 (126-161)||(23092263-23092298)
chr7 (126-160)||(31197758-31197792)
chr7 (127-161)||(36772303-36772337)
chr7 (126-164)||(43785298-43785336)
chr7 (126-159)||(29861839-29861872)
chr7 (126-159)||(31274082-31274115)
chr7 (127-159)||(27009529-27009561)
[»] chr4 (27 HSPs)
chr4 (161-412)||(15063324-15063575)
chr4 (176-263)||(29084010-29084098)
chr4 (126-161)||(5609201-5609236)
chr4 (126-161)||(19660531-19660566)
chr4 (126-161)||(27528794-27528829)
chr4 (126-161)||(34844757-34844792)
chr4 (126-161)||(40058851-40058886)
chr4 (127-161)||(23639787-23639821)
chr4 (127-161)||(23645445-23645479)
chr4 (127-161)||(34723962-34723996)
chr4 (126-159)||(45787703-45787736)
chr4 (128-161)||(52983782-52983815)
chr4 (129-161)||(20077986-20078018)
chr4 (127-159)||(24672305-24672337)
chr4 (127-159)||(52494653-52494685)
chr4 (126-157)||(32986364-32986395)
chr4 (126-161)||(43719086-43719121)
chr4 (127-161)||(33289217-33289251)
chr4 (127-161)||(51595185-51595219)
chr4 (126-159)||(4912091-4912124)
chr4 (127-160)||(20566514-20566547)
chr4 (126-159)||(23131435-23131468)
chr4 (126-159)||(44343679-44343712)
chr4 (127-159)||(12824565-12824597)
chr4 (127-163)||(13871340-13871376)
chr4 (127-159)||(35229333-35229365)
chr4 (131-159)||(42245840-42245868)
[»] scaffold0394 (1 HSPs)
scaffold0394 (194-412)||(1959-2177)
[»] chr3 (39 HSPs)
chr3 (10-161)||(1178333-1178484)
chr3 (126-164)||(46576508-46576546)
chr3 (126-161)||(3747744-3747779)
chr3 (126-161)||(8097278-8097313)
chr3 (126-161)||(10083818-10083853)
chr3 (126-161)||(10190741-10190776)
chr3 (126-161)||(24165714-24165749)
chr3 (126-161)||(26174276-26174311)
chr3 (126-161)||(30807152-30807187)
chr3 (126-161)||(53424176-53424211)
chr3 (126-161)||(53848433-53848468)
chr3 (127-161)||(7485531-7485565)
chr3 (126-160)||(15566499-15566533)
chr3 (127-161)||(24407424-24407458)
chr3 (127-161)||(39041852-39041886)
chr3 (127-161)||(49258262-49258296)
chr3 (127-161)||(52821636-52821670)
chr3 (127-164)||(25017648-25017685)
chr3 (126-159)||(25289714-25289747)
chr3 (126-159)||(40133448-40133481)
chr3 (128-161)||(48105040-48105073)
chr3 (127-164)||(54475841-54475878)
chr3 (127-159)||(32151589-32151621)
chr3 (126-161)||(8456149-8456184)
chr3 (126-161)||(11390765-11390800)
chr3 (126-161)||(30257787-30257822)
chr3 (126-161)||(52455648-52455683)
chr3 (127-161)||(4048113-4048147)
chr3 (127-161)||(18176887-18176921)
chr3 (127-161)||(21363106-21363140)
chr3 (127-161)||(26108441-26108475)
chr3 (127-160)||(1692997-1693030)
chr3 (128-161)||(25379924-25379957)
chr3 (126-159)||(32094756-32094789)
chr3 (127-160)||(50731237-50731270)
chr3 (127-160)||(50781584-50781617)
chr3 (126-162)||(15022587-15022623)
chr3 (127-159)||(33398468-33398500)
chr3 (127-159)||(48972714-48972746)
[»] chr1 (22 HSPs)
chr1 (161-412)||(52174271-52174522)
chr1 (128-164)||(34778499-34778535)
chr1 (126-161)||(4621236-4621271)
chr1 (126-161)||(14603959-14603994)
chr1 (127-161)||(24122186-24122220)
chr1 (126-159)||(15059401-15059434)
chr1 (128-161)||(17935932-17935965)
chr1 (127-159)||(23041687-23041719)
chr1 (127-159)||(36155888-36155920)
chr1 (126-161)||(27454863-27454898)
chr1 (126-161)||(48699922-48699957)
chr1 (127-161)||(5315494-5315528)
chr1 (127-161)||(7197247-7197281)
chr1 (126-164)||(8254751-8254789)
chr1 (127-161)||(9500355-9500389)
chr1 (127-161)||(26513148-26513182)
chr1 (219-255)||(10906864-10906900)
chr1 (219-255)||(10992951-10992987)
chr1 (219-255)||(11026407-11026443)
chr1 (219-255)||(11041110-11041146)
chr1 (127-159)||(24674558-24674590)
chr1 (212-256)||(49710778-49710822)
[»] chr6 (19 HSPs)
chr6 (126-164)||(1345095-1345133)
chr6 (126-161)||(3222635-3222670)
chr6 (126-161)||(14213045-14213080)
chr6 (126-161)||(15360097-15360132)
chr6 (126-161)||(21982320-21982355)
chr6 (126-161)||(34147509-34147544)
chr6 (126-161)||(34160125-34160160)
chr6 (127-161)||(9690638-9690672)
chr6 (127-164)||(4797257-4797294)
chr6 (126-159)||(7491665-7491698)
chr6 (128-161)||(9239138-9239171)
chr6 (126-161)||(9844101-9844136)
chr6 (126-161)||(21148510-21148545)
chr6 (127-161)||(654146-654180)
chr6 (127-161)||(28672230-28672264)
chr6 (166-239)||(30955226-30955299)
chr6 (127-159)||(5360071-5360103)
chr6 (127-159)||(11841065-11841097)
chr6 (193-269)||(31189570-31189646)
[»] chr2 (23 HSPs)
chr2 (126-164)||(33827572-33827610)
chr2 (126-161)||(27290737-27290772)
chr2 (126-161)||(43374329-43374364)
chr2 (126-161)||(44946052-44946087)
chr2 (127-161)||(11941210-11941244)
chr2 (126-160)||(15038123-15038157)
chr2 (127-161)||(25293322-25293356)
chr2 (127-161)||(30466830-30466864)
chr2 (126-159)||(18692125-18692158)
chr2 (127-164)||(44929846-44929883)
chr2 (126-161)||(2140485-2140520)
chr2 (126-161)||(8259060-8259095)
chr2 (126-161)||(19054189-19054224)
chr2 (126-161)||(28669036-28669071)
chr2 (126-161)||(34516413-34516448)
chr2 (126-161)||(35171963-35171998)
chr2 (126-161)||(39957921-39957956)
chr2 (127-161)||(27269344-27269378)
chr2 (126-159)||(1845048-1845081)
chr2 (127-160)||(9400961-9400994)
chr2 (126-159)||(18976454-18976487)
chr2 (127-159)||(6714295-6714327)
chr2 (127-159)||(13266654-13266686)
[»] chr8 (28 HSPs)
chr8 (126-163)||(18532263-18532300)
chr8 (126-161)||(2639410-2639445)
chr8 (126-161)||(3734622-3734657)
chr8 (126-161)||(4718812-4718847)
chr8 (126-161)||(8765525-8765560)
chr8 (126-161)||(34237654-34237689)
chr8 (127-161)||(9713621-9713655)
chr8 (126-164)||(14633118-14633156)
chr8 (127-161)||(21603397-21603431)
chr8 (128-161)||(28193641-28193674)
chr8 (126-159)||(34610686-34610719)
chr8 (126-159)||(42328173-42328206)
chr8 (126-158)||(10544924-10544956)
chr8 (126-161)||(2618353-2618388)
chr8 (126-161)||(32879446-32879481)
chr8 (126-161)||(33747049-33747084)
chr8 (126-161)||(39349423-39349458)
chr8 (127-161)||(6953008-6953042)
chr8 (127-161)||(20470083-20470117)
chr8 (126-159)||(19471779-19471812)
chr8 (126-159)||(19542703-19542736)
chr8 (126-159)||(19589960-19589993)
chr8 (126-159)||(20306077-20306110)
chr8 (126-159)||(21092710-21092743)
chr8 (127-159)||(264400-264432)
chr8 (127-159)||(651489-651521)
chr8 (127-159)||(837224-837256)
chr8 (127-159)||(42643118-42643150)
[»] scaffold0576 (1 HSPs)
scaffold0576 (126-161)||(5081-5116)
[»] scaffold0070 (1 HSPs)
scaffold0070 (126-161)||(40487-40522)
[»] chr5 (25 HSPs)
chr5 (126-161)||(8484660-8484695)
chr5 (126-161)||(10631288-10631323)
chr5 (126-161)||(18207370-18207405)
chr5 (126-161)||(19456210-19456245)
chr5 (126-161)||(27498730-27498765)
chr5 (126-161)||(37495217-37495252)
chr5 (126-161)||(41351103-41351138)
chr5 (127-161)||(11926501-11926535)
chr5 (127-161)||(22693098-22693132)
chr5 (127-160)||(25750613-25750646)
chr5 (127-159)||(7151468-7151500)
chr5 (126-161)||(7085625-7085660)
chr5 (126-161)||(30485991-30486026)
chr5 (126-161)||(33709502-33709537)
chr5 (126-161)||(35425176-35425211)
chr5 (126-161)||(38630978-38631013)
chr5 (126-161)||(38684370-38684405)
chr5 (126-160)||(21236361-21236395)
chr5 (126-160)||(22392852-22392886)
chr5 (127-161)||(27487554-27487588)
chr5 (126-159)||(25548533-25548566)
chr5 (127-159)||(6014280-6014312)
chr5 (127-159)||(28614486-28614518)
chr5 (127-159)||(34310307-34310339)
chr5 (127-159)||(36895590-36895622)
[»] scaffold0102 (1 HSPs)
scaffold0102 (126-161)||(39255-39290)
[»] scaffold0051 (1 HSPs)
scaffold0051 (126-161)||(52870-52905)
[»] scaffold0019 (1 HSPs)
scaffold0019 (126-161)||(161972-162007)
[»] scaffold0217 (1 HSPs)
scaffold0217 (127-161)||(7309-7343)
[»] scaffold0199 (1 HSPs)
scaffold0199 (127-161)||(8451-8485)
[»] scaffold0328 (1 HSPs)
scaffold0328 (127-160)||(13047-13080)


Alignment Details
Target: chr7 (Bit Score: 252; Significance: 1e-140; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 161 - 432
Target Start/End: Original strand, 31438977 - 31439248
Alignment:
161 caagaattttgcatcttgatatcaaatctcaaaacattcttttagatgaagatttttgtccaaaaatatctgattttggtctagctaaaatatgtcaaaa 260  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
31438977 caagaattttgcatcttgatatcaaacctcaaaacattcttttagatgaagatttttgtccaaaaatatctgattttggtctagctaaaatatgtcaaaa 31439076  T
261 gaaagagagtgttgtttccctacttggcgcgagaggaactataggcttcatagcacccgaggtattcaatcgagcatttggtggagtttcttctaagtct 360  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
31439077 gaaagagagtgttgtttccctacttggcacaagaggaactataggcttcatagcacccgaggtattcagtcgagcatttggtggagtttcttctaagtct 31439176  T
361 gatgtatacagttatggcatgttgactctcgaaataactggagaaagaaagagtcgtgatactagagggtct 432  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
31439177 gatgtatacagttatggcatgttgactctcgaaataaccggagaaagaaagagtcgtgatactagagggtct 31439248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 161 - 383
Target Start/End: Complemental strand, 31541290 - 31541068
Alignment:
161 caagaattttgcatcttgatatcaaatctcaaaacattcttttagatgaagatttttgtccaaaaatatctgattttggtctagctaaaatatgtcaaaa 260  Q
    |||||||||||||||||||||||||| | |||||||||||||| |||||| ||||||| || ||||| ||||||||||| ||||||||| |||| ||||     
31541290 caagaattttgcatcttgatatcaaaccacaaaacattcttttggatgaaaatttttgccccaaaatctctgattttggactagctaaagtatgccaaag 31541191  T
261 gaaagagagtgttgtttccctacttggcgcgagaggaactataggcttcatagcacccgaggtattcaatcgagcatttggtggagtttcttctaagtct 360  Q
    ||| || ||| |||| ||  |||||||| | |||||||||||||| |  |||||||| || |||||||  ||| ||| |||||||||||||  |||||||    
31541190 gaatgatagtattgtgtctttacttggcacaagaggaactataggatatatagcaccagaagtattcagccgaacatatggtggagtttctcataagtct 31541091  T
361 gatgtatacagttatggcatgtt 383  Q
    |||||||| |||||||| |||||    
31541090 gatgtatatagttatggtatgtt 31541068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 161 - 383
Target Start/End: Original strand, 33305109 - 33305331
Alignment:
161 caagaattttgcatcttgatatcaaatctcaaaacattcttttagatgaagatttttgtccaaaaatatctgattttggtctagctaaaatatgtcaaaa 260  Q
    |||| ||||||||||||||| ||||| | |||||||||||||| ||| |||||||||| |||||||| || |||||||| |||||| ||||||||||||     
33305109 caaggattttgcatcttgatgtcaaaccccaaaacattcttttggattaagatttttgcccaaaaatctcagattttggactagctcaaatatgtcaaag 33305208  T
261 gaaagagagtgttgtttccctacttggcgcgagaggaactataggcttcatagcacccgaggtattcaatcgagcatttggtggagtttcttctaagtct 360  Q
    ||| || ||  |||| ||| |||||||  | |||||||||||||| | ||||||||| || ||||| | |||| |||||||||||||||||  ||||||     
33305209 gaaggatagcattgtatccatacttggtacaagaggaactataggatacatagcaccggaagtatttagtcgaacatttggtggagtttctcataagtcc 33305308  T
361 gatgtatacagttatggcatgtt 383  Q
    ||||||||||||||||| |||||    
33305309 gatgtatacagttatggtatgtt 33305331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 172 - 412
Target Start/End: Complemental strand, 31608517 - 31608277
Alignment:
172 catcttgatatcaaatctcaaaacattcttttagatgaagatttttgtccaaaaatatctgattttggtctagctaaaatatgtcaaaagaaagagagtg 271  Q
    ||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||| || |||||||||||||||| ||| || |||     
31608517 catcttgatatcaaacctcaaaacattcttttggatgaagacttttgtccaaaaatatctgattttggacttgctaaaatatgtcaaaggaaggacagta 31608418  T
272 ttgtttccctacttggcgcgagaggaactataggcttcatagcacccgaggtattcaatcgagcatttggtggagtttcttctaagtctgatgtatacag 371  Q
    |||| ||  || | ||  |  ||||||||||||| |  || || || || ||||| | | ||||||||||||| |||||||  || ||||||||||| ||    
31608417 ttgtgtcaatattggggacacgaggaactataggatatatggcgccagaagtatttagtagagcatttggtggtgtttcttacaaatctgatgtatatag 31608318  T
372 ttatggcatgttgactctcgaaataactggagaaagaaaga 412  Q
    |||||||||||||| ||| ||||| | ||||| ||| ||||    
31608317 ttatggcatgttgattcttgaaatgattggaggaaggaaga 31608277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 161 - 395
Target Start/End: Complemental strand, 31576268 - 31576034
Alignment:
161 caagaattttgcatcttgatatcaaatctcaaaacattcttttagatgaagatttttgtccaaaaatatctgattttggtctagctaaaatatgtcaaaa 260  Q
    |||| ||| ||||||||||||| ||| |||||||||||||||| ||||| |||||||| |||||||| ||||||||||| ||||| |||||||| |||||    
31576268 caaggattctgcatcttgatataaaacctcaaaacattcttttggatgatgatttttgcccaaaaatctctgattttggactagcgaaaatatgccaaaa 31576169  T
261 gaaagagagtgttgtttccctacttggcgcgagaggaactataggcttcatagcacccgaggtattcaatcgagcatttggtggagtttcttctaagtct 360  Q
    ||| || ||| |||| ||  || | || || |||||||| ||||| |  || ||||| || | ||| ||| || ||||||||||||||||||  || |||    
31576168 gaaggatagtattgtgtcaatattaggggcaagaggaacaataggatatatggcaccagaagcatttaatagatcatttggtggagtttcttacaaatct 31576069  T
361 gatgtatacagttatggcatgttgactctcgaaat 395  Q
    |||||||| |||||||||||||||| ||| |||||    
31576068 gatgtatatagttatggcatgttgattcttgaaat 31576034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 161 - 395
Target Start/End: Complemental strand, 31604934 - 31604700
Alignment:
161 caagaattttgcatcttgatatcaaatctcaaaacattcttttagatgaagatttttgtccaaaaatatctgattttggtctagctaaaatatgtcaaaa 260  Q
    |||| ||| ||||||||||||| ||| |||||||||||||||| ||||| |||||||| |||||||| ||||||||||| ||||| |||||||| |||||    
31604934 caaggattctgcatcttgatataaaacctcaaaacattcttttggatgatgatttttgcccaaaaatctctgattttggactagcgaaaatatgccaaaa 31604835  T
261 gaaagagagtgttgtttccctacttggcgcgagaggaactataggcttcatagcacccgaggtattcaatcgagcatttggtggagtttcttctaagtct 360  Q
    ||| || ||| |||| ||  || | || || |||||||| ||||| |  || ||||| || | ||| ||| || ||||||||||||||||||  || |||    
31604834 gaaggatagtattgtgtcaatattaggggcaagaggaacaataggatatatggcaccagaagcatttaatagatcatttggtggagtttcttacaaatct 31604735  T
361 gatgtatacagttatggcatgttgactctcgaaat 395  Q
    |||||||| |||||||||||||||| ||| |||||    
31604734 gatgtatatagttatggcatgttgattcttgaaat 31604700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 170 - 395
Target Start/End: Complemental strand, 31585669 - 31585444
Alignment:
170 tgcatcttgatatcaaatctcaaaacattcttttagatgaagatttttgtccaaaaatatctgattttggtctagctaaaatatgtcaaaagaaagagag 269  Q
    ||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||| | |||||| || ||    
31585669 tgcatcttgatatcaaaccccaaaacattcttttggatgaagatttttgtccaaaaatatctgattttggactagcaaaaatatgccgaaagaaggatag 31585570  T
270 tgttgtttccctacttggcgcgagaggaactataggcttcatagcacccgaggtattcaatcgagcatttggtggagtttcttctaagtctgatgtatac 369  Q
    |  ||| ||  | || || || |||||||||||||| |  || ||||| ||  |||||| | |||| |||||||||||||||   ||||||||||| ||     
31585569 tactgtgtcaatgctaggggcaagaggaactataggatatatggcaccagaaatattcattagagcctttggtggagtttctcacaagtctgatgtgtat 31585470  T
370 agttatggcatgttgactctcgaaat 395  Q
    |||||||||||| ||| ||| |||||    
31585469 agttatggcatgctgattctagaaat 31585444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 173 - 412
Target Start/End: Complemental strand, 31614797 - 31614558
Alignment:
173 atcttgatatcaaatctcaaaacattcttttagatgaagatttttgtccaaaaatatctgattttggtctagctaaaatatgtcaaaagaaagagagtgt 272  Q
    ||||||||| |||| |||||||||||||||| |||||||||||||| |||||||| ||||||||||| ||||| |||||||| |||||||| || ||| |    
31614797 atcttgataccaaacctcaaaacattcttttggatgaagatttttgcccaaaaatctctgattttggactagcgaaaatatgccaaaagaaggatagtat 31614698  T
273 tgtttccctacttggcgcgagaggaactataggcttcatagcacccgaggtattcaatcgagcatttggtggagtttcttctaagtctgatgtatacagt 372  Q
    ||| ||  || | ||  | |||||||||||||| |  || ||||| || ||||| |   |||||||||| ||||||||||  || ||||||||||| |||    
31614697 tgtgtcaatattaggtacaagaggaactataggatatatggcaccagaagtatttagcagagcatttggcggagtttcttacaaatctgatgtatatagt 31614598  T
373 tatggcatgttgactctcgaaataactggagaaagaaaga 412  Q
    ||||| ||||||| ||| ||||| | ||||| ||||||||    
31614597 tatggaatgttgattcttgaaatgattggaggaagaaaga 31614558  T

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Target: chr7; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 172 - 395
Target Start/End: Complemental strand, 31618527 - 31618304
Alignment:
172 catcttgatatcaaatctcaaaacattcttttagatgaagatttttgtccaaaaatatctgattttggtctagctaaaatatgtcaaaagaaagagagtg 271  Q
    ||||||||||| ||| |||||||||||||||| ||||||||||||||||||||||| || |||||||| |||||||||||||| |||| ||| || |||     
31618527 catcttgatataaaacctcaaaacattcttttggatgaagatttttgtccaaaaatctcagattttggactagctaaaatatgccaaaggaaggatagta 31618428  T
272 ttgtttccctacttggcgcgagaggaactataggcttcatagcacccgaggtattcaatcgagcatttggtggagtttcttctaagtctgatgtatacag 371  Q
    |||| ||  || | || || |||||||||||||| | ||| ||||| ||  |||| | | |||| |||||||||||||| |  |  ||||||||||| ||    
31618427 ttgtgtcaatattaggggcaagaggaactataggatacatggcaccagaaatatttagtagagcgtttggtggagtttcgtacagatctgatgtatatag 31618328  T
372 ttatggcatgttgactctcgaaat 395  Q
    |||||||||||||| ||| |||||    
31618327 ttatggcatgttgattcttgaaat 31618304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 170 - 412
Target Start/End: Complemental strand, 31595316 - 31595074
Alignment:
170 tgcatcttgatatcaaatctcaaaacattcttttagatgaagatttttgtccaaaaatatctgattttggtctagctaaaatatgtcaaaagaaagagag 269  Q
    ||||||||||||||||| |||||||||||||||| || ||| | ||||| |||||||| ||||||||||| ||||| ||||||||||||| ||| || ||    
31595316 tgcatcttgatatcaaacctcaaaacattcttttggacgaaaacttttgcccaaaaatctctgattttggactagcaaaaatatgtcaaatgaatgatag 31595217  T
270 tgttgtttccctacttggcgcgagaggaactataggcttcatagcacccgaggtattcaatcgagcatttggtggagtttcttctaagtctgatgtatac 369  Q
    | |||| ||  |||  ||  | |||||||||||||| |  || || || || ||||| |   ||||||||||||| |||||||  || ||||||||||||    
31595216 tattgtgtcaataccggggacaagaggaactataggatatatggcgccagaagtatttagcagagcatttggtggtgtttcttacaaatctgatgtatac 31595117  T
370 agttatggcatgttgactctcgaaataactggagaaagaaaga 412  Q
    |||||||| ||||||| ||| ||||| | ||||| ||||||||    
31595116 agttatggtatgttgattcttgaaatgattggaggaagaaaga 31595074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 161 - 368
Target Start/End: Original strand, 31572801 - 31573007
Alignment:
161 caagaattttgcatcttgatatcaaatctcaaaacattcttttagatgaagatttttgtccaaaaatatctgattttggtctagctaaaatatgtcaaaa 260  Q
    |||| ||||||||||||||||| ||| | |||||||||||||| |||||||||||||| |||||||| ||||||||||| |||||| ||||||| ||||     
31572801 caaggattttgcatcttgatataaaacc-caaaacattcttttggatgaagatttttgcccaaaaatctctgattttggactagctcaaatatgccaaag 31572899  T
261 gaaagagagtgttgtttccctacttggcgcgagaggaactataggcttcatagcacccgaggtattcaatcgagcatttggtggagtttcttctaagtct 360  Q
    ||| || ||| |||| ||| |||||||| | || ||||||||||| | |||||| || || ||||| |   |||  |||||||||||||||   ||||||    
31572900 gaaggatagtattgtgtccatacttggcacaaggggaactataggatacatagctcctgaagtatttagcagagtgtttggtggagtttctcacaagtct 31572999  T
361 gatgtata 368  Q
    ||||||||    
31573000 gatgtata 31573007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 244 - 412
Target Start/End: Complemental strand, 31532584 - 31532416
Alignment:
244 gctaaaatatgtcaaaagaaagagagtgttgtttccctacttggcgcgagaggaactataggcttcatagcacccgaggtattcaatcgagcatttggtg 343  Q
    ||||||||||| |||||||| || ||| |||| ||  |||||||| | |||||||| ||||| | ||||||||| || || || | |||| ||| |||||    
31532584 gctaaaatatgccaaaagaatgacagtattgtgtctatacttggcacaagaggaaccataggatacatagcaccagaagtgtttagtcgaacatatggtg 31532485  T
344 gagtttcttctaagtctgatgtatacagttatggcatgttgactctcgaaataactggagaaagaaaga 412  Q
    ||||||||   ||||||||||||||||||||||| ||||| | ||| ||||| | ||||| ||||||||    
31532484 gagtttctcacaagtctgatgtatacagttatgggatgttaattctagaaatgattggaggaagaaaga 31532416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 2751473 - 2751438
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
2751473 gaaaactcggtatccgatccaagaatcgactaatcc 2751438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 16374196 - 16374161
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
16374196 gaaaactcggtatccgatccaagaatcgactaatcc 16374161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 22120090 - 22120055
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
22120090 gaaaactcggtatccgatccaagaatcgactaatcc 22120055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 28090021 - 28089986
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
28090021 gaaaactcggtatccgatccaagaatcgactaatcc 28089986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 40542909 - 40542944
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
40542909 gaaaactcggtatccgatccaagaatcgactaatcc 40542944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 3851958 - 3851924
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||||||||||||||||||    
3851958 aaaactcggtatccgatccaagaatcgactaatcc 3851924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 7275478 - 7275444
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||||||||||||||||||    
7275478 aaaactcggtatccgatccaagaatcgactaatcc 7275444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 160
Target Start/End: Complemental strand, 27312354 - 27312320
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatc 160  Q
    |||||||||||||||||||||||||||||||||||    
27312354 gaaaactcggtatccgatccaagaatcgactaatc 27312320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 31712902 - 31712936
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||||||||||||||||||    
31712902 aaaactcggtatccgatccaagaatcgactaatcc 31712936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 159
Target Start/End: Complemental strand, 11998051 - 11998018
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaat 159  Q
    ||||||||||||||||||||||||||||||||||    
11998051 gaaaactcggtatccgatccaagaatcgactaat 11998018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 18044308 - 18044275
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatc 160  Q
    ||||||||||||||||||||||||||||||||||    
18044308 aaaactcggtatccgatccaagaatcgactaatc 18044275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 41907514 - 41907547
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatc 160  Q
    ||||||||||||||||||||||||||||||||||    
41907514 aaaactcggtatccgatccaagaatcgactaatc 41907547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 159
Target Start/End: Original strand, 17196950 - 17196982
Alignment:
127 aaaactcggtatccgatccaagaatcgactaat 159  Q
    |||||||||||||||||||||||||||||||||    
17196950 aaaactcggtatccgatccaagaatcgactaat 17196982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 128 - 160
Target Start/End: Complemental strand, 32849791 - 32849759
Alignment:
128 aaactcggtatccgatccaagaatcgactaatc 160  Q
    |||||||||||||||||||||||||||||||||    
32849791 aaactcggtatccgatccaagaatcgactaatc 32849759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 654704 - 654739
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||| ||||||||||    
654704 gaaaactcggtatccgatccaagaaccgactaatcc 654739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 7175861 - 7175896
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||| |||||||||||||||||||||||||||    
7175861 gaaaactcagtatccgatccaagaatcgactaatcc 7175896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 13332433 - 13332468
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||| |||||||||||||||||||||    
13332433 gaaaactcggtatctgatccaagaatcgactaatcc 13332468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 21217832 - 21217867
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||| ||||||||    
21217832 gaaaactcggtatccgatccaagaatcaactaatcc 21217867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 21835353 - 21835318
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||| ||||||||||||||||||||||||||    
21835353 gaaaactcgatatccgatccaagaatcgactaatcc 21835318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 22300004 - 22299969
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||| |||||||||||||||||    
22300004 gaaaactcggtatccgattcaagaatcgactaatcc 22299969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 159
Target Start/End: Complemental strand, 22638488 - 22638457
Alignment:
128 aaactcggtatccgatccaagaatcgactaat 159  Q
    ||||||||||||||||||||||||||||||||    
22638488 aaactcggtatccgatccaagaatcgactaat 22638457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 23092298 - 23092263
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||| ||||||||||||||    
23092298 gaaaactcggtatccgatccatgaatcgactaatcc 23092263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 160
Target Start/End: Complemental strand, 31197792 - 31197758
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatc 160  Q
    ||||||||| |||||||||||||||||||||||||    
31197792 gaaaactcgatatccgatccaagaatcgactaatc 31197758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 36772303 - 36772337
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||| ||||||||||||||||    
36772303 aaaactcggtatccgatcaaagaatcgactaatcc 36772337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 164
Target Start/End: Original strand, 43785298 - 43785336
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatccaag 164  Q
    |||| ||||||||||||||||| ||||||||||||||||    
43785298 gaaagctcggtatccgatccaaaaatcgactaatccaag 43785336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 159
Target Start/End: Complemental strand, 29861872 - 29861839
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaat 159  Q
    ||||||||||||||||||| ||||||||||||||    
29861872 gaaaactcggtatccgatctaagaatcgactaat 29861839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 159
Target Start/End: Complemental strand, 31274115 - 31274082
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaat 159  Q
    |||||||||||||||| |||||||||||||||||    
31274115 gaaaactcggtatccggtccaagaatcgactaat 31274082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 159
Target Start/End: Complemental strand, 27009561 - 27009529
Alignment:
127 aaaactcggtatccgatccaagaatcgactaat 159  Q
    |||||||||||||| ||||||||||||||||||    
27009561 aaaactcggtatccaatccaagaatcgactaat 27009529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 160; Significance: 4e-85; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 161 - 412
Target Start/End: Original strand, 15063324 - 15063575
Alignment:
161 caagaattttgcatcttgatatcaaatctcaaaacattcttttagatgaagatttttgtccaaaaatatctgattttggtctagctaaaatatgtcaaaa 260  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
15063324 caagaattttgcatcttgatatcaaacctcaaaacattcttttagatgaagatttttgcccaaaaatatctgattttggtcttgctaaaatatgtcaaaa 15063423  T
261 gaaagagagtgttgtttccctacttggcgcgagaggaactataggcttcatagcacccgaggtattcaatcgagcatttggtggagtttcttctaagtct 360  Q
    ||||||||||||||| ||| | |||||  | |||||||||||||||| |||| |||| || ||||| | |||||| ||||||| ||||||||||||||||    
15063424 gaaagagagtgttgtgtccatgcttgggacaagaggaactataggctacatatcaccggaagtatttagtcgagcttttggtgcagtttcttctaagtct 15063523  T
361 gatgtatacagttatggcatgttgactctcgaaataactggagaaagaaaga 412  Q
    ||||||||||||||||||||||||| ||| ||||| || |||| || |||||    
15063524 gatgtatacagttatggcatgttgattcttgaaatgaccggaggaaaaaaga 15063575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 176 - 263
Target Start/End: Complemental strand, 29084098 - 29084010
Alignment:
176 ttgatatcaaatctcaaaacattcttttagatgaagatttttgtccaaaaatatct--gattttggtctagctaaaatatgtcaaaagaa 263  Q
    ||||||||||| | |||||||||||||| ||||| |||||||| ||||||| ||||  |||||||| |||||||||||||||||| ||||    
29084098 ttgatatcaaaccccaaaacattcttttggatgacgatttttg-ccaaaaaaatctaagattttggactagctaaaatatgtcaagagaa 29084010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 5609201 - 5609236
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
5609201 gaaaactcggtatccgatccaagaatcgactaatcc 5609236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 19660531 - 19660566
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
19660531 gaaaactcggtatccgatccaagaatcgactaatcc 19660566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 27528794 - 27528829
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
27528794 gaaaactcggtatccgatccaagaatcgactaatcc 27528829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 34844757 - 34844792
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
34844757 gaaaactcggtatccgatccaagaatcgactaatcc 34844792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 40058851 - 40058886
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
40058851 gaaaactcggtatccgatccaagaatcgactaatcc 40058886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 23639821 - 23639787
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||||||||||||||||||    
23639821 aaaactcggtatccgatccaagaatcgactaatcc 23639787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 23645479 - 23645445
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||||||||||||||||||    
23645479 aaaactcggtatccgatccaagaatcgactaatcc 23645445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 34723996 - 34723962
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||||||||||||||||||    
34723996 aaaactcggtatccgatccaagaatcgactaatcc 34723962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 159
Target Start/End: Original strand, 45787703 - 45787736
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaat 159  Q
    ||||||||||||||||||||||||||||||||||    
45787703 gaaaactcggtatccgatccaagaatcgactaat 45787736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 161
Target Start/End: Complemental strand, 52983815 - 52983782
Alignment:
128 aaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||    
52983815 aaactcggtatccgatccaagaatcgactaatcc 52983782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 161
Target Start/End: Original strand, 20077986 - 20078018
Alignment:
129 aactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||||||||||||||||    
20077986 aactcggtatccgatccaagaatcgactaatcc 20078018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 159
Target Start/End: Original strand, 24672305 - 24672337
Alignment:
127 aaaactcggtatccgatccaagaatcgactaat 159  Q
    |||||||||||||||||||||||||||||||||    
24672305 aaaactcggtatccgatccaagaatcgactaat 24672337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 159
Target Start/End: Complemental strand, 52494685 - 52494653
Alignment:
127 aaaactcggtatccgatccaagaatcgactaat 159  Q
    |||||||||||||||||||||||||||||||||    
52494685 aaaactcggtatccgatccaagaatcgactaat 52494653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 157
Target Start/End: Complemental strand, 32986395 - 32986364
Alignment:
126 gaaaactcggtatccgatccaagaatcgacta 157  Q
    ||||||||||||||||||||||||||||||||    
32986395 gaaaactcggtatccgatccaagaatcgacta 32986364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 43719086 - 43719121
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||| ||||||||||||||||||||||||||||||    
43719086 gaaaattcggtatccgatccaagaatcgactaatcc 43719121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 33289251 - 33289217
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||| |||||||||||||||||||||||||||||    
33289251 aaaacccggtatccgatccaagaatcgactaatcc 33289217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 51595219 - 51595185
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||||||||||| ||||||    
51595219 aaaactcggtatccgatccaagaatcgattaatcc 51595185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 159
Target Start/End: Complemental strand, 4912124 - 4912091
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaat 159  Q
    |||||||||||||| |||||||||||||||||||    
4912124 gaaaactcggtatctgatccaagaatcgactaat 4912091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 20566547 - 20566514
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatc 160  Q
    |||||||| |||||||||||||||||||||||||    
20566547 aaaactcgatatccgatccaagaatcgactaatc 20566514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 159
Target Start/End: Original strand, 23131435 - 23131468
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaat 159  Q
    ||||||||||||||||||| ||||||||||||||    
23131435 gaaaactcggtatccgatcgaagaatcgactaat 23131468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 159
Target Start/End: Complemental strand, 44343712 - 44343679
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaat 159  Q
    |||||||||||||||||| |||||||||||||||    
44343712 gaaaactcggtatccgattcaagaatcgactaat 44343679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 159
Target Start/End: Complemental strand, 12824597 - 12824565
Alignment:
127 aaaactcggtatccgatccaagaatcgactaat 159  Q
    ||||||| |||||||||||||||||||||||||    
12824597 aaaactccgtatccgatccaagaatcgactaat 12824565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 13871376 - 13871340
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatccaa 163  Q
    |||| ||||||||||||| ||||||||||||||||||    
13871376 aaaattcggtatccgatctaagaatcgactaatccaa 13871340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 159
Target Start/End: Complemental strand, 35229365 - 35229333
Alignment:
127 aaaactcggtatccgatccaagaatcgactaat 159  Q
    |||| ||||||||||||||||||||||||||||    
35229365 aaaattcggtatccgatccaagaatcgactaat 35229333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 159
Target Start/End: Complemental strand, 42245868 - 42245840
Alignment:
131 ctcggtatccgatccaagaatcgactaat 159  Q
    |||||||||||||||||||||||||||||    
42245868 ctcggtatccgatccaagaatcgactaat 42245840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 131; Significance: 8e-68; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 194 - 412
Target Start/End: Complemental strand, 2177 - 1959
Alignment:
194 acattcttttagatgaagatttttgtccaaaaatatctgattttggtctagctaaaatatgtcaaaagaaagagagtgttgtttccctacttggcgcgag 293  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| | |||||  | ||    
2177 acattcttttagatgaagatttttgcccaaaaatatctgattttggtcttgctaaaatatgtcaaaagaaagagagtgttgtgtccatgcttgggacaag 2078  T
294 aggaactataggcttcatagcacccgaggtattcaatcgagcatttggtggagtttcttctaagtctgatgtatacagttatggcatgttgactctcgaa 393  Q
    |||||||||||||| |||| |||| || ||||| | |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||    
2077 aggaactataggctacatatcaccggaagtatttagtcgagcttttggtgcagtttcttctaagtctgatgtatacagttatggcatgttgattcttgaa 1978  T
394 ataactggagaaagaaaga 412  Q
    || || |||| || |||||    
1977 atgaccggaggaaaaaaga 1959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 123; Significance: 5e-63; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 10 - 161
Target Start/End: Complemental strand, 1178484 - 1178333
Alignment:
10 gaagcagagacagaaccaacttggtaatatgagaaaagatgataatgaagacttggataagagtgtggatgatgacaatgaatttcctttgtaagtatca 109  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
1178484 gaagcaaagacagaaccaacttggtaatatgagaaaagatgataatgaagacttggataagagtgtggatgatgacaatgaatttcctttgtaagtatca 1178385  T
110 ctttctttgnnnnnnngaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||       |||||||||||||||||||||||| |||||||||||    
1178384 ctttctttgtttttttgaaaactcggtatccgatccaagattcgactaatcc 1178333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 126 - 164
Target Start/End: Complemental strand, 46576546 - 46576508
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatccaag 164  Q
    |||||||||||||||||||||||||||||||||||||||    
46576546 gaaaactcggtatccgatccaagaatcgactaatccaag 46576508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 3747779 - 3747744
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
3747779 gaaaactcggtatccgatccaagaatcgactaatcc 3747744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 8097278 - 8097313
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
8097278 gaaaactcggtatccgatccaagaatcgactaatcc 8097313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 10083818 - 10083853
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
10083818 gaaaactcggtatccgatccaagaatcgactaatcc 10083853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 10190741 - 10190776
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
10190741 gaaaactcggtatccgatccaagaatcgactaatcc 10190776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 24165714 - 24165749
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
24165714 gaaaactcggtatccgatccaagaatcgactaatcc 24165749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 26174311 - 26174276
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
26174311 gaaaactcggtatccgatccaagaatcgactaatcc 26174276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 30807152 - 30807187
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
30807152 gaaaactcggtatccgatccaagaatcgactaatcc 30807187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 53424176 - 53424211
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
53424176 gaaaactcggtatccgatccaagaatcgactaatcc 53424211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 53848433 - 53848468
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
53848433 gaaaactcggtatccgatccaagaatcgactaatcc 53848468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 7485531 - 7485565
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||||||||||||||||||    
7485531 aaaactcggtatccgatccaagaatcgactaatcc 7485565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 160
Target Start/End: Original strand, 15566499 - 15566533
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatc 160  Q
    |||||||||||||||||||||||||||||||||||    
15566499 gaaaactcggtatccgatccaagaatcgactaatc 15566533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 24407458 - 24407424
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||||||||||||||||||    
24407458 aaaactcggtatccgatccaagaatcgactaatcc 24407424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 39041852 - 39041886
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||||||||||||||||||    
39041852 aaaactcggtatccgatccaagaatcgactaatcc 39041886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 49258262 - 49258296
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||||||||||||||||||    
49258262 aaaactcggtatccgatccaagaatcgactaatcc 49258296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 52821636 - 52821670
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||||||||||||||||||    
52821636 aaaactcggtatccgatccaagaatcgactaatcc 52821670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 164
Target Start/End: Complemental strand, 25017685 - 25017648
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatccaag 164  Q
    |||||||||||| |||||||||||||||||||||||||    
25017685 aaaactcggtattcgatccaagaatcgactaatccaag 25017648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 159
Target Start/End: Original strand, 25289714 - 25289747
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaat 159  Q
    ||||||||||||||||||||||||||||||||||    
25289714 gaaaactcggtatccgatccaagaatcgactaat 25289747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 159
Target Start/End: Original strand, 40133448 - 40133481
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaat 159  Q
    ||||||||||||||||||||||||||||||||||    
40133448 gaaaactcggtatccgatccaagaatcgactaat 40133481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 161
Target Start/End: Complemental strand, 48105073 - 48105040
Alignment:
128 aaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||    
48105073 aaactcggtatccgatccaagaatcgactaatcc 48105040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 164
Target Start/End: Complemental strand, 54475878 - 54475841
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatccaag 164  Q
    ||||||||||||| ||||||||||||||||||||||||    
54475878 aaaactcggtatctgatccaagaatcgactaatccaag 54475841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 159
Target Start/End: Complemental strand, 32151621 - 32151589
Alignment:
127 aaaactcggtatccgatccaagaatcgactaat 159  Q
    |||||||||||||||||||||||||||||||||    
32151621 aaaactcggtatccgatccaagaatcgactaat 32151589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 8456149 - 8456184
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||| |||||||||||||||||    
8456149 gaaaactcggtatccgattcaagaatcgactaatcc 8456184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 11390800 - 11390765
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||| |||||||||||||||||||||||||||    
11390800 gaaaactcagtatccgatccaagaatcgactaatcc 11390765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 30257822 - 30257787
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||| ||||||||||||||||||||||||||||||    
30257822 gaaaattcggtatccgatccaagaatcgactaatcc 30257787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 52455648 - 52455683
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||| ||||||||||||||||||||    
52455648 gaaaactcggtatccaatccaagaatcgactaatcc 52455683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 4048147 - 4048113
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||||||||| ||||||||    
4048147 aaaactcggtatccgatccaagaatcaactaatcc 4048113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 18176887 - 18176921
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||| |||||||||||||||||||||||||||    
18176887 aaaactctgtatccgatccaagaatcgactaatcc 18176921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 21363140 - 21363106
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||||||||||| ||||||    
21363140 aaaactcggtatccgatccaagaatcgattaatcc 21363106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 26108475 - 26108441
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||| |||||||||||||||||    
26108475 aaaactcggtatccgattcaagaatcgactaatcc 26108441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 1693030 - 1692997
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatc 160  Q
    ||||||||||||||||| ||||||||||||||||    
1693030 aaaactcggtatccgattcaagaatcgactaatc 1692997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 161
Target Start/End: Complemental strand, 25379957 - 25379924
Alignment:
128 aaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||| |||||||||||||||||||||||||||    
25379957 aaactcagtatccgatccaagaatcgactaatcc 25379924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 159
Target Start/End: Original strand, 32094756 - 32094789
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaat 159  Q
    ||||||||||||||||||||||||| ||||||||    
32094756 gaaaactcggtatccgatccaagaaccgactaat 32094789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 50731237 - 50731270
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatc 160  Q
    |||||||||||||||||||||| |||||||||||    
50731237 aaaactcggtatccgatccaaggatcgactaatc 50731270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 50781617 - 50781584
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatc 160  Q
    |||||||||||||||||||||| |||||||||||    
50781617 aaaactcggtatccgatccaaggatcgactaatc 50781584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 162
Target Start/End: Original strand, 15022587 - 15022623
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcca 162  Q
    ||||||||||||| |||| ||||||||||||||||||    
15022587 gaaaactcggtattcgatgcaagaatcgactaatcca 15022623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 159
Target Start/End: Original strand, 33398468 - 33398500
Alignment:
127 aaaactcggtatccgatccaagaatcgactaat 159  Q
    |||| ||||||||||||||||||||||||||||    
33398468 aaaattcggtatccgatccaagaatcgactaat 33398500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 159
Target Start/End: Original strand, 48972714 - 48972746
Alignment:
127 aaaactcggtatccgatccaagaatcgactaat 159  Q
    ||||||||||||||||| |||||||||||||||    
48972714 aaaactcggtatccgattcaagaatcgactaat 48972746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 7e-47; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 161 - 412
Target Start/End: Original strand, 52174271 - 52174522
Alignment:
161 caagaattttgcatcttgatatcaaatctcaaaacattcttttagatgaagatttttgtccaaaaatatctgattttggtctagctaaaatatgtcaaaa 260  Q
    |||| ||||||||||||||||||||| ||||||||||| |||| |||||||| ||||| ||||||||||||||||| || ||||| |||||||| ||||     
52174271 caaggattttgcatcttgatatcaaacctcaaaacattattttggatgaagacttttgcccaaaaatatctgatttcggactagcaaaaatatgccaaag 52174370  T
261 gaaagagagtgttgtttccctacttggcgcgagaggaactataggcttcatagcacccgaggtattcaatcgagcatttggtggagtttcttctaagtct 360  Q
    ||| || |||||||| ||  |||||||| | |||||||||||||| |  || || || || ||||  | | ||||||||||||| |||||||  || |||    
52174371 gaaggatagtgttgtgtcaatacttggcacaagaggaactataggatatatggcgccagaagtatatagtagagcatttggtggtgtttcttacaaatct 52174470  T
361 gatgtatacagttatggcatgttgactctcgaaataactggagaaagaaaga 412  Q
    ||| ||||||||||||||||||||| ||| ||||| | ||||| ||||||||    
52174471 gatatatacagttatggcatgttgattcttgaaatgattggaggaagaaaga 52174522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 34778535 - 34778499
Alignment:
128 aaactcggtatccgatccaagaatcgactaatccaag 164  Q
    |||||||||||||||||||||||||||||||||||||    
34778535 aaactcggtatccgatccaagaatcgactaatccaag 34778499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 4621236 - 4621271
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
4621236 gaaaactcggtatccgatccaagaatcgactaatcc 4621271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 14603994 - 14603959
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
14603994 gaaaactcggtatccgatccaagaatcgactaatcc 14603959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 24122220 - 24122186
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||||||||||||||||||    
24122220 aaaactcggtatccgatccaagaatcgactaatcc 24122186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 159
Target Start/End: Original strand, 15059401 - 15059434
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaat 159  Q
    ||||||||||||||||||||||||||||||||||    
15059401 gaaaactcggtatccgatccaagaatcgactaat 15059434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 161
Target Start/End: Complemental strand, 17935965 - 17935932
Alignment:
128 aaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||    
17935965 aaactcggtatccgatccaagaatcgactaatcc 17935932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 159
Target Start/End: Complemental strand, 23041719 - 23041687
Alignment:
127 aaaactcggtatccgatccaagaatcgactaat 159  Q
    |||||||||||||||||||||||||||||||||    
23041719 aaaactcggtatccgatccaagaatcgactaat 23041687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 159
Target Start/End: Original strand, 36155888 - 36155920
Alignment:
127 aaaactcggtatccgatccaagaatcgactaat 159  Q
    |||||||||||||||||||||||||||||||||    
36155888 aaaactcggtatccgatccaagaatcgactaat 36155920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 27454863 - 27454898
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||| ||||||||||||||||||||||||||||    
27454863 gaaaactaggtatccgatccaagaatcgactaatcc 27454898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 48699957 - 48699922
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||| ||||||||||||||||||||||||||    
48699957 gaaaactcgatatccgatccaagaatcgactaatcc 48699922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 5315528 - 5315494
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||||||||||||| ||||    
5315528 aaaactcggtatccgatccaagaatcgacttatcc 5315494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 7197247 - 7197281
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||| ||||||||||||||    
7197247 aaaactcggtatccgatccatgaatcgactaatcc 7197281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 164
Target Start/End: Original strand, 8254751 - 8254789
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatccaag 164  Q
    |||||||||||||||||| ||||||||||||||| ||||    
8254751 gaaaactcggtatccgattcaagaatcgactaattcaag 8254789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 9500355 - 9500389
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||| ||||||||||||||||||||||||||    
9500355 aaaactcgatatccgatccaagaatcgactaatcc 9500389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 26513148 - 26513182
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||| ||||||||||||||||||||||    
26513148 aaaactcggtattcgatccaagaatcgactaatcc 26513182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 10906864 - 10906900
Alignment:
219 tccaaaaatatctgattttggtctagctaaaatatgt 255  Q
    ||||||||||||||| ||||||||||||||| |||||    
10906864 tccaaaaatatctgactttggtctagctaaattatgt 10906900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 10992951 - 10992987
Alignment:
219 tccaaaaatatctgattttggtctagctaaaatatgt 255  Q
    ||||||||||||||| ||||||||||||||| |||||    
10992951 tccaaaaatatctgactttggtctagctaaattatgt 10992987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 11026407 - 11026443
Alignment:
219 tccaaaaatatctgattttggtctagctaaaatatgt 255  Q
    ||||||||||||||| ||||||||||||||| |||||    
11026407 tccaaaaatatctgactttggtctagctaaattatgt 11026443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 11041110 - 11041146
Alignment:
219 tccaaaaatatctgattttggtctagctaaaatatgt 255  Q
    ||||||||||| ||||||||||||||||||| |||||    
11041110 tccaaaaatatgtgattttggtctagctaaattatgt 11041146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 159
Target Start/End: Complemental strand, 24674590 - 24674558
Alignment:
127 aaaactcggtatccgatccaagaatcgactaat 159  Q
    |||| ||||||||||||||||||||||||||||    
24674590 aaaattcggtatccgatccaagaatcgactaat 24674558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 49710778 - 49710822
Alignment:
212 atttttgtccaaaaatatctgattttggtctagctaaaatatgtc 256  Q
    |||||||||||||||| || |||||||| || |||||||||||||    
49710778 atttttgtccaaaaatttcagattttggacttgctaaaatatgtc 49710822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 126 - 164
Target Start/End: Complemental strand, 1345133 - 1345095
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatccaag 164  Q
    |||||||||||||||||||||||||||||||||||||||    
1345133 gaaaactcggtatccgatccaagaatcgactaatccaag 1345095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 3222635 - 3222670
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
3222635 gaaaactcggtatccgatccaagaatcgactaatcc 3222670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 14213080 - 14213045
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
14213080 gaaaactcggtatccgatccaagaatcgactaatcc 14213045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 15360097 - 15360132
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
15360097 gaaaactcggtatccgatccaagaatcgactaatcc 15360132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 21982320 - 21982355
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
21982320 gaaaactcggtatccgatccaagaatcgactaatcc 21982355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 34147544 - 34147509
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
34147544 gaaaactcggtatccgatccaagaatcgactaatcc 34147509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 34160160 - 34160125
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
34160160 gaaaactcggtatccgatccaagaatcgactaatcc 34160125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 9690638 - 9690672
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||||||||||||||||||    
9690638 aaaactcggtatccgatccaagaatcgactaatcc 9690672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 164
Target Start/End: Complemental strand, 4797294 - 4797257
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatccaag 164  Q
    |||||||| |||||||||||||||||||||||||||||    
4797294 aaaactcgttatccgatccaagaatcgactaatccaag 4797257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 159
Target Start/End: Original strand, 7491665 - 7491698
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaat 159  Q
    ||||||||||||||||||||||||||||||||||    
7491665 gaaaactcggtatccgatccaagaatcgactaat 7491698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 161
Target Start/End: Complemental strand, 9239171 - 9239138
Alignment:
128 aaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||    
9239171 aaactcggtatccgatccaagaatcgactaatcc 9239138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 9844136 - 9844101
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||| ||||||||||||||||||||||||||    
9844136 gaaaactcgatatccgatccaagaatcgactaatcc 9844101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 21148510 - 21148545
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||| |||||||||||||||||    
21148510 gaaaactcggtatccgattcaagaatcgactaatcc 21148545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 654146 - 654180
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||| |||||||||||||    
654146 aaaactcggtatccgatccaataatcgactaatcc 654180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 28672264 - 28672230
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||| |||||||||||||||||||||    
28672264 aaaactcggtatctgatccaagaatcgactaatcc 28672230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 30955226 - 30955299
Alignment:
166 attttgcatcttgatatcaaatctcaaaacattcttttagatgaagatttttgtccaaaaatatctgattttgg 239  Q
    ||||| ||| ||||||| ||| | || |||||||||||||||||| |||| |||||||| || || ||||||||    
30955226 attttacattttgatataaaaccacataacattcttttagatgaaaatttatgtccaaagatttcagattttgg 30955299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 159
Target Start/End: Original strand, 5360071 - 5360103
Alignment:
127 aaaactcggtatccgatccaagaatcgactaat 159  Q
    |||||||||||||||||| ||||||||||||||    
5360071 aaaactcggtatccgatctaagaatcgactaat 5360103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 159
Target Start/End: Complemental strand, 11841097 - 11841065
Alignment:
127 aaaactcggtatccgatccaagaatcgactaat 159  Q
    ||||||||||||||||||||| |||||||||||    
11841097 aaaactcggtatccgatccaataatcgactaat 11841065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 269
Target Start/End: Complemental strand, 31189646 - 31189570
Alignment:
193 aacattcttttagatgaagatttttgtccaaaaatatctgattttggtctagctaaaatatgtcaaaagaaagagag 269  Q
    |||||||||||||||||  |||| ||||||||||| || |||||||| || || ||| | |||| ||| ||||||||    
31189646 aacattcttttagatgagaatttatgtccaaaaatttcagattttggacttgcaaaactctgtccaaaaaaagagag 31189570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 126 - 164
Target Start/End: Original strand, 33827572 - 33827610
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatccaag 164  Q
    |||||||||||||||||||||||||||||||||||||||    
33827572 gaaaactcggtatccgatccaagaatcgactaatccaag 33827610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 27290772 - 27290737
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
27290772 gaaaactcggtatccgatccaagaatcgactaatcc 27290737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 43374329 - 43374364
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
43374329 gaaaactcggtatccgatccaagaatcgactaatcc 43374364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 44946052 - 44946087
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
44946052 gaaaactcggtatccgatccaagaatcgactaatcc 44946087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 11941210 - 11941244
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||||||||||||||||||    
11941210 aaaactcggtatccgatccaagaatcgactaatcc 11941244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 160
Target Start/End: Complemental strand, 15038157 - 15038123
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatc 160  Q
    |||||||||||||||||||||||||||||||||||    
15038157 gaaaactcggtatccgatccaagaatcgactaatc 15038123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 25293356 - 25293322
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||||||||||||||||||    
25293356 aaaactcggtatccgatccaagaatcgactaatcc 25293322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 30466830 - 30466864
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||||||||||||||||||    
30466830 aaaactcggtatccgatccaagaatcgactaatcc 30466864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 159
Target Start/End: Complemental strand, 18692158 - 18692125
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaat 159  Q
    ||||||||||||||||||||||||||||||||||    
18692158 gaaaactcggtatccgatccaagaatcgactaat 18692125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 164
Target Start/End: Original strand, 44929846 - 44929883
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatccaag 164  Q
    ||||||||||||||||||||||||||||||||| ||||    
44929846 aaaactcggtatccgatccaagaatcgactaattcaag 44929883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 2140485 - 2140520
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||||| |||||||||||||    
2140485 gaaaactcggtatccgatccaataatcgactaatcc 2140520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 8259095 - 8259060
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||| |||||||||||||||||||||||||||    
8259095 gaaaactcagtatccgatccaagaatcgactaatcc 8259060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 19054224 - 19054189
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||| |||||||||||||||||||||    
19054224 gaaaactcggtatctgatccaagaatcgactaatcc 19054189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 28669071 - 28669036
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||||| |||||||||||||    
28669071 gaaaactcggtatccgatccaaaaatcgactaatcc 28669036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 34516413 - 34516448
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||| ||||||||||||||||||||||||||||    
34516413 gaaaacttggtatccgatccaagaatcgactaatcc 34516448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 35171998 - 35171963
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||| |||||||||||||||||    
35171998 gaaaactcggtatccgattcaagaatcgactaatcc 35171963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 39957956 - 39957921
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||| ||||||||||||||||||||    
39957956 gaaaactcggtatccaatccaagaatcgactaatcc 39957921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 27269344 - 27269378
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||| ||||||||||||||||||||    
27269344 aaaactcggtatcctatccaagaatcgactaatcc 27269378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 159
Target Start/End: Original strand, 1845048 - 1845081
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaat 159  Q
    ||||||||||||||||| ||||||||||||||||    
1845048 gaaaactcggtatccgagccaagaatcgactaat 1845081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 9400961 - 9400994
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatc 160  Q
    ||||||| ||||||||||||||||||||||||||    
9400961 aaaactcagtatccgatccaagaatcgactaatc 9400994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 159
Target Start/End: Original strand, 18976454 - 18976487
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaat 159  Q
    ||||| ||||||||||||||||||||||||||||    
18976454 gaaaattcggtatccgatccaagaatcgactaat 18976487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 159
Target Start/End: Original strand, 6714295 - 6714327
Alignment:
127 aaaactcggtatccgatccaagaatcgactaat 159  Q
    |||||||||||||| ||||||||||||||||||    
6714295 aaaactcggtatccaatccaagaatcgactaat 6714327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 159
Target Start/End: Complemental strand, 13266686 - 13266654
Alignment:
127 aaaactcggtatccgatccaagaatcgactaat 159  Q
    |||||||| ||||||||||||||||||||||||    
13266686 aaaactcgatatccgatccaagaatcgactaat 13266654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000003; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 126 - 163
Target Start/End: Complemental strand, 18532300 - 18532263
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatccaa 163  Q
    ||||||||||||||||||||||||||||||||||||||    
18532300 gaaaactcggtatccgatccaagaatcgactaatccaa 18532263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 2639410 - 2639445
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
2639410 gaaaactcggtatccgatccaagaatcgactaatcc 2639445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 3734622 - 3734657
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
3734622 gaaaactcggtatccgatccaagaatcgactaatcc 3734657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 4718847 - 4718812
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
4718847 gaaaactcggtatccgatccaagaatcgactaatcc 4718812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 8765525 - 8765560
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
8765525 gaaaactcggtatccgatccaagaatcgactaatcc 8765560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 34237654 - 34237689
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
34237654 gaaaactcggtatccgatccaagaatcgactaatcc 34237689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 9713655 - 9713621
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||||||||||||||||||    
9713655 aaaactcggtatccgatccaagaatcgactaatcc 9713621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 164
Target Start/End: Complemental strand, 14633156 - 14633118
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatccaag 164  Q
    ||||||| |||||||||||||||||||||||||||||||    
14633156 gaaaacttggtatccgatccaagaatcgactaatccaag 14633118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 21603431 - 21603397
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||||||||||||||||||    
21603431 aaaactcggtatccgatccaagaatcgactaatcc 21603397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 161
Target Start/End: Complemental strand, 28193674 - 28193641
Alignment:
128 aaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||    
28193674 aaactcggtatccgatccaagaatcgactaatcc 28193641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 159
Target Start/End: Original strand, 34610686 - 34610719
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaat 159  Q
    ||||||||||||||||||||||||||||||||||    
34610686 gaaaactcggtatccgatccaagaatcgactaat 34610719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 159
Target Start/End: Complemental strand, 42328206 - 42328173
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaat 159  Q
    ||||||||||||||||||||||||||||||||||    
42328206 gaaaactcggtatccgatccaagaatcgactaat 42328173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 126 - 158
Target Start/End: Original strand, 10544924 - 10544956
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaa 158  Q
    |||||||||||||||||||||||||||||||||    
10544924 gaaaactcggtatccgatccaagaatcgactaa 10544956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 2618388 - 2618353
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||| |||||||||||||||||||||||||    
2618388 gaaaactcggaatccgatccaagaatcgactaatcc 2618353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 32879481 - 32879446
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||| ||||||||||||||||||||    
32879481 gaaaactcggtatccaatccaagaatcgactaatcc 32879446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 33747084 - 33747049
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||| ||||||||||||    
33747084 gaaaactcggtatccgatccaaggatcgactaatcc 33747049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 39349458 - 39349423
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||| ||||||||||||||||||||||||||||    
39349458 gaaaacttggtatccgatccaagaatcgactaatcc 39349423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 6953008 - 6953042
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||| ||||||||||||||||||||||    
6953008 aaaactcggtattcgatccaagaatcgactaatcc 6953042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 20470117 - 20470083
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||| |||||||||||||    
20470117 aaaactcggtatccgatccaaaaatcgactaatcc 20470083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 159
Target Start/End: Complemental strand, 19471812 - 19471779
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaat 159  Q
    ||||||||||||||||||||||| ||||||||||    
19471812 gaaaactcggtatccgatccaagtatcgactaat 19471779  T

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Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 159
Target Start/End: Complemental strand, 19542736 - 19542703
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaat 159  Q
    ||||||||||||||||||||||| ||||||||||    
19542736 gaaaactcggtatccgatccaagtatcgactaat 19542703  T

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Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 159
Target Start/End: Original strand, 19589960 - 19589993
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaat 159  Q
    ||||||||||||||||||||||| ||||||||||    
19589960 gaaaactcggtatccgatccaagtatcgactaat 19589993  T

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Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 159
Target Start/End: Complemental strand, 20306110 - 20306077
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaat 159  Q
    ||||||||||||||||||||||| ||||||||||    
20306110 gaaaactcggtatccgatccaaggatcgactaat 20306077  T

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Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 159
Target Start/End: Complemental strand, 21092743 - 21092710
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaat 159  Q
    ||||||||||||||||||||||| ||||||||||    
21092743 gaaaactcggtatccgatccaaggatcgactaat 21092710  T

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Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 159
Target Start/End: Original strand, 264400 - 264432
Alignment:
127 aaaactcggtatccgatccaagaatcgactaat 159  Q
    |||| ||||||||||||||||||||||||||||    
264400 aaaattcggtatccgatccaagaatcgactaat 264432  T

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Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 159
Target Start/End: Complemental strand, 651521 - 651489
Alignment:
127 aaaactcggtatccgatccaagaatcgactaat 159  Q
    |||| ||||||||||||||||||||||||||||    
651521 aaaattcggtatccgatccaagaatcgactaat 651489  T

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Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 159
Target Start/End: Complemental strand, 837256 - 837224
Alignment:
127 aaaactcggtatccgatccaagaatcgactaat 159  Q
    |||| ||||||||||||||||||||||||||||    
837256 aaaattcggtatccgatccaagaatcgactaat 837224  T

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Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 159
Target Start/End: Original strand, 42643118 - 42643150
Alignment:
127 aaaactcggtatccgatccaagaatcgactaat 159  Q
    |||||||||||||||||||||||||| ||||||    
42643118 aaaactcggtatccgatccaagaatcaactaat 42643150  T

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Target: scaffold0576 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 5081 - 5116
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
5081 gaaaactcggtatccgatccaagaatcgactaatcc 5116  T

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Target: scaffold0070 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 40522 - 40487
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
40522 gaaaactcggtatccgatccaagaatcgactaatcc 40487  T

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Target: chr5 (Bit Score: 36; Significance: 0.00000000004; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 8484660 - 8484695
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
8484660 gaaaactcggtatccgatccaagaatcgactaatcc 8484695  T

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Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 10631288 - 10631323
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
10631288 gaaaactcggtatccgatccaagaatcgactaatcc 10631323  T

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Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 18207405 - 18207370
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
18207405 gaaaactcggtatccgatccaagaatcgactaatcc 18207370  T

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Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 19456210 - 19456245
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
19456210 gaaaactcggtatccgatccaagaatcgactaatcc 19456245  T

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Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 27498730 - 27498765
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
27498730 gaaaactcggtatccgatccaagaatcgactaatcc 27498765  T

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Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 37495252 - 37495217
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
37495252 gaaaactcggtatccgatccaagaatcgactaatcc 37495217  T

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Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 41351103 - 41351138
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||||||||||    
41351103 gaaaactcggtatccgatccaagaatcgactaatcc 41351138  T

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Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 11926501 - 11926535
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||||||||||||||||||    
11926501 aaaactcggtatccgatccaagaatcgactaatcc 11926535  T

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Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Complemental strand, 22693132 - 22693098
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||||||||||||||||||    
22693132 aaaactcggtatccgatccaagaatcgactaatcc 22693098  T

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Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 25750613 - 25750646
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatc 160  Q
    ||||||||||||||||||||||||||||||||||    
25750613 aaaactcggtatccgatccaagaatcgactaatc 25750646  T

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Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 159
Target Start/End: Complemental strand, 7151500 - 7151468
Alignment:
127 aaaactcggtatccgatccaagaatcgactaat 159  Q
    |||||||||||||||||||||||||||||||||    
7151500 aaaactcggtatccgatccaagaatcgactaat 7151468  T

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Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 7085625 - 7085660
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||| |||||||||||||||||    
7085625 gaaaactcggtatccgattcaagaatcgactaatcc 7085660  T

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Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 30486026 - 30485991
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||||||||||| |||||||||    
30486026 gaaaactcggtatccgatccaagaattgactaatcc 30485991  T

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Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 33709502 - 33709537
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||| |||||||||||||||||||||||||||||    
33709502 gaaaacacggtatccgatccaagaatcgactaatcc 33709537  T

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Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 35425211 - 35425176
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||| ||||||||||||||||||||||||||||||    
35425211 gaaaattcggtatccgatccaagaatcgactaatcc 35425176  T

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Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 38630978 - 38631013
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||||||||||||||||||||||||| ||||||    
38630978 gaaaactcggtatccgatccaagaatcgattaatcc 38631013  T

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Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 38684405 - 38684370
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||| ||||||||||||||||||||||||||||||    
38684405 gaaaaatcggtatccgatccaagaatcgactaatcc 38684370  T

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Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 160
Target Start/End: Original strand, 21236361 - 21236395
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatc 160  Q
    |||||||||||||||||| ||||||||||||||||    
21236361 gaaaactcggtatccgattcaagaatcgactaatc 21236395  T

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Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 160
Target Start/End: Complemental strand, 22392886 - 22392852
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatc 160  Q
    |||||||||||||||||||||| ||||||||||||    
22392886 gaaaactcggtatccgatccaaaaatcgactaatc 22392852  T

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Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 27487554 - 27487588
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    ||||||| |||||||||||||||||||||||||||    
27487554 aaaactctgtatccgatccaagaatcgactaatcc 27487588  T

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Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 159
Target Start/End: Original strand, 25548533 - 25548566
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaat 159  Q
    ||||||||||||| ||||||||||||||||||||    
25548533 gaaaactcggtattcgatccaagaatcgactaat 25548566  T

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Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 159
Target Start/End: Original strand, 6014280 - 6014312
Alignment:
127 aaaactcggtatccgatccaagaatcgactaat 159  Q
    |||||||| ||||||||||||||||||||||||    
6014280 aaaactcgatatccgatccaagaatcgactaat 6014312  T

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Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 159
Target Start/End: Original strand, 28614486 - 28614518
Alignment:
127 aaaactcggtatccgatccaagaatcgactaat 159  Q
    ||||||||||||||||||||| |||||||||||    
28614486 aaaactcggtatccgatccaaaaatcgactaat 28614518  T

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Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 159
Target Start/End: Complemental strand, 34310339 - 34310307
Alignment:
127 aaaactcggtatccgatccaagaatcgactaat 159  Q
    |||||||||||||||||||||||||||| ||||    
34310339 aaaactcggtatccgatccaagaatcgattaat 34310307  T

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Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 159
Target Start/End: Complemental strand, 36895622 - 36895590
Alignment:
127 aaaactcggtatccgatccaagaatcgactaat 159  Q
    |||||||||||||||||||||||| ||||||||    
36895622 aaaactcggtatccgatccaagaaccgactaat 36895590  T

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Target: scaffold0102 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 39290 - 39255
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||| |||||||||||||||||||||    
39290 gaaaactcggtatctgatccaagaatcgactaatcc 39255  T

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Target: scaffold0051 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 52870 - 52905
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||| |||||||||||||||||    
52870 gaaaactcggtatccgattcaagaatcgactaatcc 52905  T

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Target: scaffold0019 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 162007 - 161972
Alignment:
126 gaaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||| |||||||||||||||||||||    
162007 gaaaactcggtatctgatccaagaatcgactaatcc 161972  T

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Target: scaffold0217 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 7309 - 7343
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||| ||||||||||||||||||||||||||||    
7309 aaaacttggtatccgatccaagaatcgactaatcc 7343  T

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Target: scaffold0199 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 8451 - 8485
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatcc 161  Q
    |||||||||||||||||| ||||||||||||||||    
8451 aaaactcggtatccgatctaagaatcgactaatcc 8485  T

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Target: scaffold0328 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 13047 - 13080
Alignment:
127 aaaactcggtatccgatccaagaatcgactaatc 160  Q
    |||||||||||||||||||||||||| |||||||    
13047 aaaactcggtatccgatccaagaatcaactaatc 13080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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