View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8957_low_56 (Length: 329)
Name: NF8957_low_56
Description: NF8957
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8957_low_56 |
 | |
|
| [»] chr7 (14 HSPs) |
| |
|
Alignment Details
Target: chr7 (Bit Score: 325; Significance: 0; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 1 - 329
Target Start/End: Complemental strand, 31438984 - 31438656
Alignment:
| Q |
1 |
aattcttgaaatacaaccttgatgtaagtactctagtcctctagcaatgctaattgcaatatggaacattgtgttccaatccaaatcacaaatagcattt |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31438984 |
aattcttgaaatacaaccttgatgtaagtactctagtcctctagcaatgctaattgcaatatggaacattgtgttccaatccaaatcacaaatagcattt |
31438885 |
T |
|
| Q |
101 |
ggaaatccacttctatatatgaacttatctaatgacccattggacatgaattcatatatcaatgcacttttgttcttttcataacaaaaacccaaaagtg |
200 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31438884 |
ggaaatccacttttatatatgaacttatctaatgacccattggacatgaattcatatatcaatgcacttttgttcttttcataacaaaaacccaaaagtg |
31438785 |
T |
|
| Q |
201 |
agacaatgttcacatgtgatgttttacttatgcttgcaacttcatttataaattcttctccgtctcccttgcactcacttattactttcaccgcaacatg |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31438784 |
agacaatgttcacatgtgatgttttacttatgcttgcaacttcatttataaattcttctccgtctcccttgcactcacttattactttcaccgcaacatg |
31438685 |
T |
|
| Q |
301 |
acggccatcaggtaaacttgctttgtaca |
329 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
31438684 |
acggccatcaggtaaacttgctttgtaca |
31438656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 5 - 329
Target Start/End: Complemental strand, 31572804 - 31572483
Alignment:
| Q |
5 |
cttgaaatacaaccttgatgtaagtactctagtcctctagcaatgctaattgcaatatggaacattgtgttccaatccaaatcacaaatagcatttggaa |
104 |
Q |
| |
|
||||||||||| ||||| || ||||| || ||||||||||| |||| |||||||| || ||| |||||||||||||||| ||||| ||| | |||| |
|
|
| T |
31572804 |
cttgaaatacatccttgttgcaagtattcgagtcctctagctatgcctattgcaattcggtacaacgtgttccaatccaaattacaaagtgcactaggaa |
31572705 |
T |
|
| Q |
105 |
atccacttctatatatgaacttatctaatgacccattggacatgaattcatatatcaatgcacttttgttcttttcataacaaaaacccaaaagtgagac |
204 |
Q |
| |
|
|||||||| || | |||||||| |||| ||| ||||| | ||||||||||||||| | ||| |||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
31572704 |
atccacttttaaagatgaacttgtctagtgaaccatttggcatgaattcatatattagtgctcttttgttct---cataacagaaacccaaaagtgagac |
31572608 |
T |
|
| Q |
205 |
aatgttcacatgtgatgttttacttatgcttgcaacttcatttataaattcttctccgtctcccttgcactcacttattactttcaccgcaacatgacgg |
304 |
Q |
| |
|
||||||||||||||||||| |||| ||||| |||||||||||||| ||||||||||| |||||||| | || |||||||||| ||||| || |||| |
|
|
| T |
31572607 |
aatgttcacatgtgatgttctactaatgctagcaacttcatttatgaattcttctccatctcccttagattcgtttattactttaaccgccacttgacaa |
31572508 |
T |
|
| Q |
305 |
ccatcaggtaaacttgctttgtaca |
329 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
31572507 |
ccatcaggtaaacttgctttgtaca |
31572483 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 56 - 329
Target Start/End: Complemental strand, 33305083 - 33304808
Alignment:
| Q |
56 |
gcaatatggaacattgtgttccaatccaaatcacaaatagcatttggaaatccacttctatatatgaacttatctaatgacccattggacatgaattcat |
155 |
Q |
| |
|
||||| ||| ||||||||||||||||||||||||||||||||| ||| |||||||| ||| ||||||||||| ||||| || |||| ||||||||||| |
|
|
| T |
33305083 |
gcaatttggtacattgtgttccaatccaaatcacaaatagcatcaggagatccacttatatggatgaacttatccaatgatcctttgggcatgaattcat |
33304984 |
T |
|
| Q |
156 |
atatcaatgcacttttgttcttttcataacaaaaacccaaaagtgagacaatgttcacatgtgatgt-----tttacttatgcttgcaacttcatttata |
250 |
Q |
| |
|
|||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||| || | |||| ||||| ||||||||||||||| |
|
|
| T |
33304983 |
atatcagagctcttttgttct---cataacaaaaacccaaaagtgagacaatgttcacatgtgacgtgacgttctactaatgctagcaacttcatttata |
33304887 |
T |
|
| Q |
251 |
aattcttctccgtctcccttgcactcacttattactttcaccgcaacatgacggccatcaggtaaacttgctttgtaca |
329 |
Q |
| |
|
||||||||||| | ||||||| |||| ||||||||||||| || || ||||| ||||||||||| ||||||||||||| |
|
|
| T |
33304886 |
aattcttctccatttcccttggactcttttattactttcactgccacttgacgaccatcaggtaagcttgctttgtaca |
33304808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 17 - 327
Target Start/End: Original strand, 31576277 - 31576587
Alignment:
| Q |
17 |
ccttgatgtaagtactctagtcctctagcaatgctaattgcaatatggaacattgtgttccaatccaaatcacaaatagcatttggaaatccacttctat |
116 |
Q |
| |
|
||||| || ||||||||||| ||||||||||||| |||||| || ||||||| ||||||||||| |||||||||||||| || |||||| ||||| ||| |
|
|
| T |
31576277 |
ccttggtgcaagtactctagacctctagcaatgccaattgctatttggaacaaagtgttccaatcaaaatcacaaatagcgttaggaaattcacttttat |
31576376 |
T |
|
| Q |
117 |
atatgaacttatctaatgacccattggacatgaattcatatatcaatgcacttttgttcttttcataacaaaaacccaaaagtgagacaatgttcacatg |
216 |
Q |
| |
|
| ||||||||||| ||||| ||||||| ||||||||||||||| | ||| ||||||| | ||||||||||| || ||||| || |||||||||| || |
|
|
| T |
31576377 |
agatgaacttatccaatgatccattgggcatgaattcatatattagtgctcttttgtccacctcataacaaaagcctaaaagggacacaatgttcatgtg |
31576476 |
T |
|
| Q |
217 |
tgatgttttacttatgcttgcaacttcatttataaattcttctccgtctcccttgcactcacttattactttcaccgcaacatgacggccatcaggtaaa |
316 |
Q |
| |
|
||||||| ||| ||||| |||||||||||||| ||||||||||| | ||| ||| | ||| |||||||||||||||| || ||||| |||||| |||| |
|
|
| T |
31576477 |
tgatgttcgactaatgctagcaacttcatttatgaattcttctccatttcctttggattcatttattactttcaccgccacttgacgaccatcaattaaa |
31576576 |
T |
|
| Q |
317 |
cttgctttgta |
327 |
Q |
| |
|
||||||||||| |
|
|
| T |
31576577 |
cttgctttgta |
31576587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 17 - 327
Target Start/End: Original strand, 31604943 - 31605253
Alignment:
| Q |
17 |
ccttgatgtaagtactctagtcctctagcaatgctaattgcaatatggaacattgtgttccaatccaaatcacaaatagcatttggaaatccacttctat |
116 |
Q |
| |
|
||||| || ||||||||||| ||||||||||||| |||||| || ||||||| ||||||||||| |||||||||||||| || |||||| ||||| ||| |
|
|
| T |
31604943 |
ccttggtgcaagtactctagacctctagcaatgccaattgctatttggaacaaagtgttccaatcaaaatcacaaatagcgttaggaaattcacttttat |
31605042 |
T |
|
| Q |
117 |
atatgaacttatctaatgacccattggacatgaattcatatatcaatgcacttttgttcttttcataacaaaaacccaaaagtgagacaatgttcacatg |
216 |
Q |
| |
|
| ||||||||||| ||||| ||||||| ||||||||||||||| | ||| ||||||| | ||||||||||| || ||||| || |||||||||| || |
|
|
| T |
31605043 |
agatgaacttatccaatgatccattgggcatgaattcatatattagtgctcttttgtccacctcataacaaaagcctaaaagggacacaatgttcatgtg |
31605142 |
T |
|
| Q |
217 |
tgatgttttacttatgcttgcaacttcatttataaattcttctccgtctcccttgcactcacttattactttcaccgcaacatgacggccatcaggtaaa |
316 |
Q |
| |
|
||||||| ||| ||||| |||||||||||||| ||||||||||| | ||| ||| | ||| |||||||||||||||| || ||||| |||||| |||| |
|
|
| T |
31605143 |
tgatgttcgactaatgctagcaacttcatttatgaattcttctccatttcctttggattcatttattactttcaccgccacttgacgaccatcaattaaa |
31605242 |
T |
|
| Q |
317 |
cttgctttgta |
327 |
Q |
| |
|
||||||||||| |
|
|
| T |
31605243 |
cttgctttgta |
31605253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 327
Target Start/End: Original strand, 31541283 - 31541606
Alignment:
| Q |
1 |
aattcttgaaatacaaccttgatgtaagtactctagtcctctagcaatgctaattgcaatatggaacattgtgttccaatccaaatcacaaatagcattt |
100 |
Q |
| |
|
||||||||||||||| |||||||| ||||| |||||||||| |||||| | |||||||| ||| ||| ||| |||||||||||| ||||||||||| |
|
|
| T |
31541283 |
aattcttgaaatacatccttgatgcaagtattctagtcctcgagcaattccgattgcaatttggtacaatgtcttccaatccaaactacaaatagcatca |
31541382 |
T |
|
| Q |
101 |
ggaaatccacttctatatatgaacttatctaatgacccattggacatgaattcatatatcaatgcacttttgttcttttcataacaaaaacccaaaagtg |
200 |
Q |
| |
|
||||||||||| || ||||||||||| ||||| || |||| || ||| |||||||| | ||| |||||||||| |||||||||| |||||||||| |
|
|
| T |
31541383 |
tgaaatccacttttaagaatgaacttatccaatgatcctttgggcaagaactcatatattagtgctcttttgttct---cataacaaaatcccaaaagtg |
31541479 |
T |
|
| Q |
201 |
agacaatgttcacatgtgatgttttacttatgcttgcaacttcatttataaattcttctccgtctcccttgcactcacttattactttcaccgcaacatg |
300 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||| |||||||||||||| || |||||||| | |||||| ||||| |||| | |||||| || || || |
|
|
| T |
31541480 |
agacaatgttcacatgtgatgttctactaatgctagcaacttcatttatgaaatcttctccatttcccttagactcatttataattttcactgctacttg |
31541579 |
T |
|
| Q |
301 |
acggccatcaggtaaacttgctttgta |
327 |
Q |
| |
|
||| ||||||||||| |||||||||| |
|
|
| T |
31541580 |
acgaccatcaggtaagtttgctttgta |
31541606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 21 - 329
Target Start/End: Original strand, 31614815 - 31615123
Alignment:
| Q |
21 |
gatgtaagtactctagtcctctagcaatgctaattgcaatatggaacattgtgttccaatccaaatcacaaatagcatttggaaatccacttctatatat |
120 |
Q |
| |
|
|||| ||||||||||| |||||||| |||| ||||||||| ||||||| |||||||||| ||||||||||||||||| |||||| ||||| | || || |
|
|
| T |
31614815 |
gatgcaagtactctagacctctagcgatgccaattgcaatttggaacaaagtgttccaattaaaatcacaaatagcattaggaaattcacttttgtagat |
31614914 |
T |
|
| Q |
121 |
gaacttatctaatgacccattggacatgaattcatatatcaatgcacttttgttcttttcataacaaaaacccaaaagtgagacaatgttcacatgtgat |
220 |
Q |
| |
|
||| |||| ||||| || |||||||||||||||||||| | ||| ||||||||| ||||||||||| || ||||| || |||||||||| ||| || |
|
|
| T |
31614915 |
gaaactatccaatgatcctttggacatgaattcatatattagtgctcttttgttcacctcataacaaaagcctaaaagggatacaatgttcatgtgtaat |
31615014 |
T |
|
| Q |
221 |
gttttacttatgcttgcaacttcatttataaattcttctccgtctcccttgcactcacttattactttcaccgcaacatgacggccatcaggtaaacttg |
320 |
Q |
| |
|
||| ||| ||||| |||||||||||||| ||||||||||| | |||||| ||||| ||| |||||||||||| |||||||| |||||| |||||||| |
|
|
| T |
31615015 |
gttcgactaatgctagcaacttcatttatgaattcttctccatttccctttgactcatttagtactttcaccgccacatgacgaccatcaattaaacttg |
31615114 |
T |
|
| Q |
321 |
ctttgtaca |
329 |
Q |
| |
|
||||||||| |
|
|
| T |
31615115 |
ctttgtaca |
31615123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 12 - 329
Target Start/End: Original strand, 31585682 - 31585999
Alignment:
| Q |
12 |
tacaaccttgatgtaagtactctagtcctctagcaatgctaattgcaatatggaacattgtgttccaatccaaatcacaaatagcatttggaaatccact |
111 |
Q |
| |
|
|||| |||||||| || ||||||| ||||||||||||| || |||||| ||||||| ||||||||||| |||||| | |||||||| |||||| || |
|
|
| T |
31585682 |
tacatccttgatgcaaatactctaaacctctagcaatgccaactgcaatttggaacaaagtgttccaatcaaaatcatatatagcattaggaaattggct |
31585781 |
T |
|
| Q |
112 |
tctatatatgaacttatctaatgacccattggacatgaattcatatatcaatgcacttttgttcttttcataacaaaaacccaaaagtgagacaatgttc |
211 |
Q |
| |
|
|||||| || |||||| | ||||| || |||||||||||||||||||||||||| ||||||||| ||||| ||||| || |||||||| |||||||| |
|
|
| T |
31585782 |
tctatagataaacttacccaatgatcctttggacatgaattcatatatcaatgctcttttgttcacctcatagcaaaagcctaaaagtgatacaatgttg |
31585881 |
T |
|
| Q |
212 |
acatgtgatgttttacttatgcttgcaacttcatttataaattcttctccgtctcccttgcactcacttattactttcaccgcaacatgacggccatcag |
311 |
Q |
| |
|
| ||||||||| |||| ||||| | |||||||||||| ||||||||||| | |||||| ||| |||||||||||||||| |||||||| |||||| |
|
|
| T |
31585882 |
atgtgtgatgttctactaatgctagaaacttcatttatgaattcttctccatttcccttagtttcatttattactttcaccgccacatgacgaccatcac |
31585981 |
T |
|
| Q |
312 |
gtaaacttgctttgtaca |
329 |
Q |
| |
|
||||| ||||||||||| |
|
|
| T |
31585982 |
ttaaacatgctttgtaca |
31585999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 5 - 327
Target Start/End: Original strand, 31618535 - 31618857
Alignment:
| Q |
5 |
cttgaaatacaaccttgatgtaagtactctagtcctctagcaatgctaattgcaatatggaacattgtgttccaatccaaatcacaaatagcatttggaa |
104 |
Q |
| |
|
|||||| |||| |||||||| ||||||||||| ||| ||||||||| ||||||||| | |||| ||||||||||| ||||||||||| ||||| |||| |
|
|
| T |
31618535 |
cttgaactacatccttgatgcaagtactctagacctttagcaatgccaattgcaattcgaaacaaagtgttccaatcaaaatcacaaatggcattaggaa |
31618634 |
T |
|
| Q |
105 |
atccacttctatatatgaacttatctaatgacccattggacatgaattcatatatcaatgcacttttgttcttttcataacaaaaacccaaaagtgagac |
204 |
Q |
| |
|
|| ||||| | || ||||||||||| ||||| || |||| ||||||||||||||| | || |||||||||| ||| |||||| | || ||||| || || |
|
|
| T |
31618635 |
attcacttttgtagatgaacttatccaatgatcctttgggcatgaattcatatattagcgctcttttgttctcttcgtaacaatatcctaaaagcgacac |
31618734 |
T |
|
| Q |
205 |
aatgttcacatgtgatgttttacttatgcttgcaacttcatttataaattcttctccgtctcccttgcactcacttattactttcaccgcaacatgacgg |
304 |
Q |
| |
|
|||||||| ||||||||| |||| ||||| |||||||||||||| ||||||||||| | |||||| ||| |||||||||||||| || || ||||| |
|
|
| T |
31618735 |
aatgttcatatgtgatgtcctactaatgctagcaacttcatttatgaattcttctccatttccctttgtctcgcttattactttcactgccacttgacga |
31618834 |
T |
|
| Q |
305 |
ccatcaggtaaacttgctttgta |
327 |
Q |
| |
|
| || | ||||||||||||||| |
|
|
| T |
31618835 |
ctattatataaacttgctttgta |
31618857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 5 - 327
Target Start/End: Original strand, 31532630 - 31532949
Alignment:
| Q |
5 |
cttgaaatacaaccttgatgtaagtactctagtcctctagcaatgctaattgcaatatggaacattgtgttccaatccaaatcacaaatagcatttggaa |
104 |
Q |
| |
|
|||||| |||| |||||||| ||||| ||||||||| |||||||| |||||||| ||| ||| || ||||||||| ||| ||||||||||| || | |
|
|
| T |
31532630 |
cttgaattacatccttgatgcaagtattctagtccttgagcaatgccgattgcaatttggtacaatgcgttccaatctaaactacaaatagcatcaggca |
31532729 |
T |
|
| Q |
105 |
atccacttctatatatgaacttatctaatgacccattggacatgaattcatatatcaatgcacttttgttcttttcataacaaaaacccaaaagtgagac |
204 |
Q |
| |
|
| |||||| | ||||| ||||||||||| || ||||||||||||||||||| | ||| |||||||||| |||| ||||||||||||||||| || |
|
|
| T |
31532730 |
acccacttttgaggatgaatttatctaatgatcctctggacatgaattcatatattagtgctcttttgttct---catagcaaaaacccaaaagtgaaac |
31532826 |
T |
|
| Q |
205 |
aatgttcacatgtgatgttttacttatgcttgcaacttcatttataaattcttctccgtctcccttgcactcacttattactttcaccgcaacatgacgg |
304 |
Q |
| |
|
|||||||||||||||||| |||| |||||||||||||||||| | |||||||||| | |||||| |||| |||||||||||||||| || | ||| |
|
|
| T |
31532827 |
gatgttcacatgtgatgttctactaatgcttgcaacttcatttgtgaattcttctctatttccctttgactcgtttattactttcaccgccacttcacga |
31532926 |
T |
|
| Q |
305 |
ccatcaggtaaacttgctttgta |
327 |
Q |
| |
|
||||||||||| |||||||||| |
|
|
| T |
31532927 |
ccatcaggtaagtttgctttgta |
31532949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 5 - 329
Target Start/End: Original strand, 31595322 - 31595646
Alignment:
| Q |
5 |
cttgaaatacaaccttgatgtaagtactctagtcctctagcaatgctaattgcaatatggaacattgtgttccaatccaaatcacaaatagcatttggaa |
104 |
Q |
| |
|
|||||| |||| |||||||| |||||||||| ||||||||||||| || ||||| ||||||| |||||| |||| |||||||||| ||| | |||| |
|
|
| T |
31595322 |
cttgaactacatccttgatgcaagtactctaaacctctagcaatgccgatagcaatttggaacaaagtgttcgaatcaaaatcacaaacagcgtcaggaa |
31595421 |
T |
|
| Q |
105 |
atccacttctatatatgaacttatctaatgacccattggacatgaattcatatatcaatgcacttttgttcttttcataacaaaaacccaaaagtgagac |
204 |
Q |
| |
|
|||||||| |||| ||||| || |||| ||| || |||| |||||| |||||||| | ||| ||||| || || |||||| |||| |||||||| || |
|
|
| T |
31595422 |
atccacttttatagatgaatttgtctagtgatcctttgggcatgaactcatatattagtgctcttttatttgcctcgtaacaataacctaaaagtgacac |
31595521 |
T |
|
| Q |
205 |
aatgttcacatgtgatgttttacttatgcttgcaacttcatttataaattcttctccgtctcccttgcactcacttattactttcaccgcaacatgacgg |
304 |
Q |
| |
|
|||||||| ||||||||| |||| ||||| |||||||||||||| || ||||| || | ||| || |||| ||||||||||||| || || ||||| |
|
|
| T |
31595522 |
aatgttcatgtgtgatgttctactgatgctagcaacttcatttatgaactcttccccatttccttttgactcgtttattactttcactgccacttgacga |
31595621 |
T |
|
| Q |
305 |
ccatcaggtaaacttgctttgtaca |
329 |
Q |
| |
|
||||| | ||||||||||||||||| |
|
|
| T |
31595622 |
ccatccgttaaacttgctttgtaca |
31595646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 5 - 329
Target Start/End: Original strand, 31608525 - 31608849
Alignment:
| Q |
5 |
cttgaaatacaaccttgatgtaagtactctagtcctctagcaatgctaattgcaatatggaacattgtgttccaatccaaatcacaaatagcatttggaa |
104 |
Q |
| |
|
|||||| |||| |||||||| |||||||| || ||||||||||||| || |||| ||||||| ||||||||||| |||||||||| ||| | |||| |
|
|
| T |
31608525 |
cttgaactacatccttgatgcaagtactcgagacctctagcaatgccgatagcaacttggaacaaagtgttccaatcaaaatcacaaacagcgtcaggaa |
31608624 |
T |
|
| Q |
105 |
atccacttctatatatgaacttatctaatgacccattggacatgaattcatatatcaatgcacttttgttcttttcataacaaaaacccaaaagtgagac |
204 |
Q |
| |
|
||||||| |||| ||||||||||| | || || |||| |||| |||||||||| | || ||||| ||| |||||||||||||| || ||||| || |
|
|
| T |
31608625 |
atccactcttatagatgaacttatccagggatcctttgggcatgtattcatatattagcgctcttttattcacctcataacaaaaacctaagagtgacac |
31608724 |
T |
|
| Q |
205 |
aatgttcacatgtgatgttttacttatgcttgcaacttcatttataaattcttctccgtctcccttgcactcacttattactttcaccgcaacatgacgg |
304 |
Q |
| |
|
|||||||| ||||||||| |||| ||||| |||||||||||||| || ||||| || | ||| || |||| ||||||||||||| || || ||||| |
|
|
| T |
31608725 |
aatgttcaggtgtgatgttctactgatgctagcaacttcatttatgaactcttccccatttccttttgactcgtttattactttcactgccacttgacga |
31608824 |
T |
|
| Q |
305 |
ccatcaggtaaacttgctttgtaca |
329 |
Q |
| |
|
||||| | ||||||||||||||||| |
|
|
| T |
31608825 |
ccatccgttaaacttgctttgtaca |
31608849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 179 - 292
Target Start/End: Original strand, 32351743 - 32351856
Alignment:
| Q |
179 |
tcataacaaaaacccaaaagtgagacaatgttcacatgtgatgttttacttatgcttgcaacttcatttataaattcttctccgtctcccttgcactcac |
278 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| ||| || | || || | ||||||||||| || |||| ||| |||||||| | ||| |
|
|
| T |
32351743 |
tcataacaaaaacccaaaagtgaaacaatgttcacatgtgaggttctagtaattctatctacttcatttatgaaatcttttccatctccctttgaatcat |
32351842 |
T |
|
| Q |
279 |
ttattactttcacc |
292 |
Q |
| |
|
|||||| ||||||| |
|
|
| T |
32351843 |
ttattattttcacc |
32351856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 32355875 - 32355827
Alignment:
| Q |
179 |
tcataacaaaaacccaaaagtgagacaatgttcacatgtgatgttttac |
227 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| |||||| ||||||| |
|
|
| T |
32355875 |
tcataacaaaaacccaaaagtgaaacaatgttcatatgtgaggttttac |
32355827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 327
Target Start/End: Complemental strand, 15063331 - 15063005
Alignment:
| Q |
1 |
aattcttgaaatacaaccttgatgtaagtactctagtcctctagcaatgctaattgcaatatggaacattgtgttccaatccaaatcacaaatagcattt |
100 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| |||| |||||||| |||| | || ||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
15063331 |
aattcttgaaatacaaccttgatgtaaatactctagacctcgagcaatgccaattacgatttggaataatgtgttccaatccaaatcacaaatagcattt |
15063232 |
T |
|
| Q |
101 |
ggaaatccacttctatatatgaacttatctaatgacccattggacatgaattcatatatcaatgcacttttgttcttttcataacaaaaacccaaaagtg |
200 |
Q |
| |
|
|||||||||||| | |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |
|
|
| T |
15063231 |
ggaaatccacttttgtatatgaacttatctaatgatccattggacatgaattcatatatcaatgctcttttgttcttctcataacaaaaacccaaaagtg |
15063132 |
T |
|
| Q |
201 |
agacaatgttcacatgtgatgttttacttatgcttgcaacttcatttataaattcttctccgtctcccttgcactcacttattactttcaccgcaacatg |
300 |
Q |
| |
|
| |||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| ||||| |
|
|
| T |
15063131 |
aaacaacgttcatatgtgatgtttttgttatgcttgcaacttcatttataaattcttctccgtttcccttgcactcgcttatcactttcaccgctacatg |
15063032 |
T |
|
| Q |
301 |
acggccatcaggtaaacttgctttgta |
327 |
Q |
| |
|
|||||||||||||||||| |||||||| |
|
|
| T |
15063031 |
acggccatcaggtaaactggctttgta |
15063005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 123; Significance: 4e-63; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 5 - 327
Target Start/End: Complemental strand, 52174274 - 52173952
Alignment:
| Q |
5 |
cttgaaatacaaccttgatgtaagtactctagtcctctagcaatgctaattgcaatatggaacattgtgttccaatccaaatcacaaatagcatttggaa |
104 |
Q |
| |
|
|||||| |||| |||||||| ||||||||||||||| ||||||||| ||||||||| ||||||| |||||||||| |||||||||| ||| | | || |
|
|
| T |
52174274 |
cttgaactacatccttgatgcaagtactctagtcctttagcaatgccaattgcaatttggaacaaagtgttccaattaaaatcacaaacagcttcagaaa |
52174175 |
T |
|
| Q |
105 |
atccacttctatatatgaacttatctaatgacccattggacatgaattcatatatcaatgcacttttgttcttttcataacaaaaacccaaaagtgagac |
204 |
Q |
| |
|
|||||||| |||| ||||||| ||| ||||| || | | ||||||||||||||| | ||| ||||||||| ||||||||| | || |||||||| || |
|
|
| T |
52174174 |
atccacttttatagatgaactgatccaatgatccttggcgcatgaattcatatattagtgctcttttgttcacctcataacaatagcctaaaagtgacac |
52174075 |
T |
|
| Q |
205 |
aatgttcacatgtgatgttttacttatgcttgcaacttcatttataaattcttctccgtctcccttgcactcacttattactttcaccgcaacatgacgg |
304 |
Q |
| |
|
||||||||| ||||||||| |||| ||||| |||||||||||||| ||||||||||| || ||||| |||| |||||||||| || || || ||||| |
|
|
| T |
52174074 |
aatgttcacgtgtgatgttctactaatgctagcaacttcatttatgaattcttctccatccccctttaactcgtttattactttaacagccacttgacga |
52173975 |
T |
|
| Q |
305 |
ccatcaggtaaacttgctttgta |
327 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
52173974 |
ccatcaggtaaacttgctttgta |
52173952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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