View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8957_low_71 (Length: 273)
Name: NF8957_low_71
Description: NF8957
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8957_low_71 |
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Alignment Details
Target: chr7 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 20 - 262
Target Start/End: Original strand, 42989579 - 42989821
Alignment:
| Q |
20 |
ggaattcaaaggaacacgtaactcacatgtaatctttggcttcatcttccttgtcttaaaaactcccaacttaaacctcactttaagatacatcttcaca |
119 |
Q |
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| T |
42989579 |
ggaattcaaaggaacacgtaactcacatgtaatctttggcttcatcttccttgtcttaaaaactcccaacttaaacctcactttaagatacatcttcaca |
42989678 |
T |
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| Q |
120 |
tcaatctcataaacacctgaatccttctctttattcagctccaaactttgatcgctactaagaacaacaactttctgacccttaaaggaagggttcaaaa |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42989679 |
tcaatctcataaacacctgaatccttctctttattcagctccaaactttgatcgctactaagaacaacaactttctgacccttaaaggaagggttcaaaa |
42989778 |
T |
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| Q |
220 |
aatgagttgttttgtgtccttgataaaaaggatcaagaataat |
262 |
Q |
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| T |
42989779 |
aatgagttgttttgtgtccttgataaaaaggatcaagaataat |
42989821 |
T |
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