View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8957_low_90 (Length: 213)
Name: NF8957_low_90
Description: NF8957
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8957_low_90 |
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Alignment Details
Target: chr2 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 17 - 196
Target Start/End: Complemental strand, 43601179 - 43601000
Alignment:
| Q |
17 |
cagaagaatgaatcctatagcacagaacaaggatagtccaccaacacaaaggtaggcaacccccaagaatctatttttcccaccaatccaagttgtagtt |
116 |
Q |
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| T |
43601179 |
cagaagaatgaatcctatagcacagaacaaggatagtccaccaacacaaaggtaggcaacccccaagaatctatttttcccaccaatccaagttgtagtt |
43601080 |
T |
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| Q |
117 |
gatagaaccaacttcttcctaccttgaaactcgtatgtgttgtaattgttctgaattagtatttctatctcatcgttaac |
196 |
Q |
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| T |
43601079 |
gatagaaccaacttcttcctaccttgaaactcgtatgtgttgtaattgttctgaattagtatttctatctcatcgttaac |
43601000 |
T |
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