View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8958_low_9 (Length: 409)

Name: NF8958_low_9
Description: NF8958
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8958_low_9
NF8958_low_9
[»] chr8 (31 HSPs)
chr8 (163-388)||(8103068-8103295)
chr8 (1-76)||(8102942-8103017)
chr8 (8-76)||(5973105-5973173)
chr8 (1-76)||(7944520-7944595)
chr8 (28-74)||(34868177-34868223)
chr8 (1-62)||(42600812-42600873)
chr8 (8-64)||(5860754-5860810)
chr8 (8-64)||(45475854-45475910)
chr8 (6-61)||(3048530-3048585)
chr8 (29-76)||(8646263-8646310)
chr8 (9-76)||(11290222-11290289)
chr8 (17-76)||(15078804-15078863)
chr8 (1-64)||(23606639-23606702)
chr8 (1-64)||(37430168-37430231)
chr8 (1-76)||(41879211-41879286)
chr8 (29-74)||(9108551-9108596)
chr8 (1-62)||(10917421-10917482)
chr8 (8-64)||(2952231-2952287)
chr8 (8-64)||(23798271-23798327)
chr8 (8-64)||(30883366-30883422)
chr8 (27-64)||(5721615-5721652)
chr8 (35-76)||(15167413-15167454)
chr8 (19-60)||(23941105-23941146)
chr8 (1-74)||(39332405-39332478)
chr8 (8-64)||(13534697-13534752)
chr8 (8-64)||(13624237-13624292)
chr8 (17-73)||(25561496-25561551)
chr8 (1-76)||(41677171-41677247)
chr8 (1-64)||(34789872-34789935)
chr8 (28-74)||(30674403-30674449)
chr8 (35-76)||(38009150-38009191)
[»] chr7 (34 HSPs)
chr7 (1-77)||(7398481-7398557)
chr7 (1-64)||(19692124-19692187)
chr7 (5-62)||(18201171-18201228)
chr7 (1-62)||(33162350-33162411)
chr7 (3-75)||(23744828-23744900)
chr7 (9-76)||(2611259-2611326)
chr7 (3-64)||(26254025-26254086)
chr7 (15-76)||(27237420-27237481)
chr7 (8-64)||(8171548-8171604)
chr7 (1-61)||(9021812-9021872)
chr7 (8-64)||(12596296-12596352)
chr7 (9-77)||(12981364-12981432)
chr7 (8-64)||(18776775-18776831)
chr7 (1-73)||(36902924-36902996)
chr7 (28-74)||(6765680-6765726)
chr7 (1-67)||(38414882-38414948)
chr7 (1-62)||(20091292-20091353)
chr7 (3-72)||(23859105-23859174)
chr7 (8-76)||(8239724-8239792)
chr7 (32-76)||(12419492-12419536)
chr7 (8-64)||(29077257-29077313)
chr7 (9-64)||(10955522-10955577)
chr7 (9-63)||(28749747-28749801)
chr7 (1-62)||(48983855-48983916)
chr7 (32-64)||(21763596-21763628)
chr7 (8-64)||(24525694-24525750)
chr7 (17-64)||(10329419-10329466)
chr7 (32-74)||(9014177-9014219)
chr7 (121-157)||(18201283-18201319)
chr7 (32-60)||(20153262-20153290)
chr7 (28-76)||(23020481-23020529)
chr7 (32-76)||(36891639-36891683)
chr7 (4-60)||(38971286-38971341)
chr7 (1-64)||(47984978-47985042)
[»] chr3 (32 HSPs)
chr3 (8-76)||(8420366-8420434)
chr3 (1-76)||(42453437-42453512)
chr3 (1-74)||(32319155-32319228)
chr3 (8-76)||(3953894-3953962)
chr3 (1-63)||(9878698-9878760)
chr3 (8-76)||(8073336-8073404)
chr3 (8-76)||(21582811-21582879)
chr3 (8-64)||(36716035-36716091)
chr3 (8-64)||(54619213-54619269)
chr3 (1-64)||(34290646-34290709)
chr3 (1-64)||(37168400-37168463)
chr3 (9-64)||(53149324-53149379)
chr3 (1-63)||(789969-790031)
chr3 (1-62)||(50939245-50939306)
chr3 (28-76)||(26279602-26279650)
chr3 (12-64)||(42098845-42098897)
chr3 (8-64)||(47467724-47467780)
chr3 (8-76)||(54574825-54574893)
chr3 (1-64)||(44708510-44708573)
chr3 (1-64)||(53506894-53506957)
chr3 (1-64)||(54407168-54407231)
chr3 (10-76)||(23641316-23641382)
chr3 (10-64)||(38681103-38681157)
chr3 (10-64)||(43207248-43207302)
chr3 (8-64)||(36606004-36606061)
chr3 (1-74)||(49393123-49393195)
chr3 (28-64)||(18372543-18372579)
chr3 (12-64)||(27078579-27078631)
chr3 (12-64)||(27084376-27084428)
chr3 (8-64)||(50258633-50258689)
chr3 (3-74)||(25855457-25855527)
chr3 (17-64)||(28689371-28689418)
[»] chr5 (38 HSPs)
chr5 (3-76)||(34425935-34426008)
chr5 (1-64)||(27079041-27079104)
chr5 (8-76)||(36868871-36868939)
chr5 (1-64)||(7338029-7338092)
chr5 (3-76)||(2024637-2024710)
chr5 (28-76)||(606211-606259)
chr5 (10-74)||(14318382-14318446)
chr5 (8-64)||(19523236-19523292)
chr5 (8-64)||(34756373-34756429)
chr5 (1-64)||(9364321-9364384)
chr5 (1-64)||(28822349-28822412)
chr5 (9-64)||(30854367-30854422)
chr5 (28-70)||(24395796-24395838)
chr5 (4-76)||(1366521-1366593)
chr5 (28-76)||(10407518-10407566)
chr5 (1-73)||(22648734-22648806)
chr5 (12-64)||(31194619-31194671)
chr5 (8-64)||(36187886-36187942)
chr5 (1-64)||(16799334-16799397)
chr5 (1-76)||(33037810-33037885)
chr5 (1-64)||(38869370-38869433)
chr5 (32-74)||(26718946-26718988)
chr5 (32-74)||(26988690-26988732)
chr5 (32-76)||(11242313-11242357)
chr5 (8-64)||(15480096-15480152)
chr5 (31-75)||(27530543-27530587)
chr5 (1-61)||(27924112-27924172)
chr5 (29-64)||(2274948-2274983)
chr5 (1-64)||(16198801-16198864)
chr5 (32-63)||(22875003-22875034)
chr5 (17-64)||(31881441-31881488)
chr5 (1-64)||(40389543-40389606)
chr5 (32-74)||(2412149-2412191)
chr5 (28-74)||(10543730-10543776)
chr5 (35-76)||(35080765-35080806)
chr5 (32-64)||(2530904-2530936)
chr5 (8-64)||(16592081-16592137)
chr5 (32-76)||(40794322-40794366)
[»] chr1 (35 HSPs)
chr1 (8-64)||(38547045-38547101)
chr1 (8-64)||(5027597-5027653)
chr1 (8-64)||(5316728-5316784)
chr1 (8-64)||(6771839-6771895)
chr1 (8-64)||(14146348-14146404)
chr1 (8-64)||(23185475-23185531)
chr1 (1-64)||(16140096-16140159)
chr1 (3-64)||(1366887-1366948)
chr1 (8-64)||(4971627-4971683)
chr1 (17-76)||(39134719-39134779)
chr1 (8-64)||(44655789-44655845)
chr1 (28-76)||(45758562-45758610)
chr1 (17-64)||(3406475-3406522)
chr1 (17-64)||(3440298-3440345)
chr1 (1-64)||(9173032-9173095)
chr1 (1-64)||(9181014-9181077)
chr1 (1-64)||(17168997-17169060)
chr1 (1-64)||(27559678-27559741)
chr1 (1-64)||(50881471-50881534)
chr1 (1-62)||(19955758-19955819)
chr1 (1-62)||(40501801-40501862)
chr1 (8-64)||(21740946-21741002)
chr1 (12-76)||(35392322-35392385)
chr1 (28-64)||(38853590-38853626)
chr1 (1-64)||(22865470-22865532)
chr1 (1-76)||(50146337-50146412)
chr1 (124-158)||(39134637-39134671)
chr1 (31-60)||(26804016-26804045)
chr1 (27-64)||(27906738-27906775)
chr1 (17-76)||(5533369-5533429)
chr1 (10-74)||(6221728-6221791)
chr1 (32-64)||(6889683-6889715)
chr1 (32-64)||(6891529-6891561)
chr1 (32-76)||(17322620-17322664)
chr1 (32-64)||(41697146-41697178)
[»] chr2 (29 HSPs)
chr2 (1-76)||(16097037-16097112)
chr2 (1-76)||(24035543-24035618)
chr2 (1-74)||(42029174-42029247)
chr2 (8-64)||(12337458-12337514)
chr2 (8-64)||(34694011-34694067)
chr2 (8-64)||(34716423-34716479)
chr2 (1-64)||(3155246-3155309)
chr2 (1-64)||(10762575-10762638)
chr2 (1-62)||(27506752-27506813)
chr2 (8-64)||(4505930-4505986)
chr2 (8-76)||(8907077-8907145)
chr2 (17-73)||(38400843-38400899)
chr2 (8-75)||(13800543-13800610)
chr2 (8-63)||(16227379-16227434)
chr2 (1-64)||(24410466-24410529)
chr2 (10-76)||(21665698-21665764)
chr2 (8-64)||(3953042-3953098)
chr2 (8-64)||(6965043-6965099)
chr2 (12-64)||(7162824-7162876)
chr2 (1-76)||(9046058-9046134)
chr2 (1-64)||(26716157-26716221)
chr2 (8-64)||(40636174-40636230)
chr2 (1-64)||(29939872-29939935)
chr2 (28-74)||(10252472-10252518)
chr2 (34-76)||(22727455-22727497)
chr2 (8-53)||(5952736-5952781)
chr2 (28-76)||(28425708-28425756)
chr2 (17-76)||(7742131-7742191)
chr2 (38-74)||(11952588-11952624)
[»] scaffold1590 (1 HSPs)
scaffold1590 (8-76)||(256-324)
[»] chr6 (20 HSPs)
chr6 (8-76)||(33774157-33774225)
chr6 (9-64)||(24711009-24711064)
chr6 (1-64)||(34397890-34397953)
chr6 (8-64)||(13727409-13727465)
chr6 (8-64)||(21280585-21280641)
chr6 (8-64)||(21479534-21479590)
chr6 (1-64)||(19737702-19737765)
chr6 (1-64)||(20711730-20711793)
chr6 (10-64)||(1155859-1155913)
chr6 (1-63)||(27788699-27788761)
chr6 (8-64)||(2477594-2477650)
chr6 (3-63)||(21183686-21183746)
chr6 (8-64)||(30832534-30832590)
chr6 (1-64)||(28075816-28075879)
chr6 (17-74)||(30121811-30121868)
chr6 (8-64)||(17353994-17354050)
chr6 (9-64)||(27314188-27314244)
chr6 (1-51)||(4036981-4037031)
chr6 (10-64)||(6159480-6159534)
chr6 (28-64)||(20611850-20611886)
[»] chr4 (44 HSPs)
chr4 (8-64)||(32915427-32915483)
chr4 (8-76)||(47129029-47129097)
chr4 (8-64)||(51691924-51691980)
chr4 (16-76)||(52468336-52468396)
chr4 (1-64)||(54780812-54780875)
chr4 (3-76)||(39329389-39329462)
chr4 (4-76)||(10041997-10042069)
chr4 (8-64)||(10428206-10428262)
chr4 (8-64)||(36118467-36118523)
chr4 (8-64)||(38209600-38209656)
chr4 (8-64)||(48209282-48209338)
chr4 (1-76)||(2790738-2790813)
chr4 (8-63)||(17679442-17679497)
chr4 (9-60)||(24396977-24397028)
chr4 (9-64)||(37514702-37514757)
chr4 (1-64)||(37777232-37777295)
chr4 (1-64)||(43455540-43455603)
chr4 (1-75)||(39655252-39655326)
chr4 (8-64)||(10978942-10978998)
chr4 (8-64)||(27112072-27112128)
chr4 (8-64)||(34768583-34768639)
chr4 (1-64)||(1105567-1105630)
chr4 (28-63)||(2135331-2135366)
chr4 (10-64)||(9578673-9578728)
chr4 (31-74)||(24614018-24614061)
chr4 (33-76)||(30507119-30507162)
chr4 (1-64)||(32128619-32128682)
chr4 (1-64)||(34027614-34027677)
chr4 (3-62)||(54083253-54083312)
chr4 (17-63)||(5128852-5128898)
chr4 (31-64)||(15735155-15735188)
chr4 (121-158)||(51691837-51691874)
chr4 (1-53)||(4167911-4167963)
chr4 (28-64)||(13460269-13460305)
chr4 (4-76)||(35465145-35465216)
chr4 (1-53)||(35779345-35779397)
chr4 (28-64)||(36178734-36178770)
chr4 (17-76)||(36362868-36362927)
chr4 (17-60)||(45656226-45656269)
chr4 (10-60)||(11906904-11906954)
chr4 (27-64)||(19498563-19498600)
chr4 (28-64)||(23508519-23508556)
chr4 (28-61)||(40217294-40217327)
chr4 (27-64)||(55255318-55255355)
[»] scaffold1320 (1 HSPs)
scaffold1320 (17-76)||(1400-1459)
[»] scaffold0182 (1 HSPs)
scaffold0182 (8-63)||(24004-24059)
[»] scaffold0039 (1 HSPs)
scaffold0039 (1-76)||(106568-106643)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-64)||(173520-173583)
[»] scaffold0012 (1 HSPs)
scaffold0012 (8-74)||(206489-206555)
[»] scaffold0097 (1 HSPs)
scaffold0097 (28-64)||(38982-39018)
[»] scaffold0070 (1 HSPs)
scaffold0070 (8-64)||(1380-1436)
[»] scaffold0227 (1 HSPs)
scaffold0227 (29-64)||(16123-16158)
[»] scaffold0022 (2 HSPs)
scaffold0022 (8-75)||(40122-40191)
scaffold0022 (8-75)||(138182-138251)
[»] scaffold0007 (1 HSPs)
scaffold0007 (36-76)||(230857-230897)
[»] scaffold0001 (1 HSPs)
scaffold0001 (32-64)||(183121-183153)


Alignment Details
Target: chr8 (Bit Score: 180; Significance: 4e-97; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 163 - 388
Target Start/End: Original strand, 8103068 - 8103295
Alignment:
Q  163 cctattgcctgaaaactgtttcccggtcgatgaactaatgaccttacctgccccatgcgcaaaaagttgaactattctttctataataggttggatgagt 262  Q
    |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  8103068 cctattgcctgaaaaccgtttccgggtcgatgaactaatgaccttacctgccccatgcgcaaaaagttgaactattctttttataataggttggataagt 8103167  T
Q  263 gaattataacaatttttggggagattgatttgctaaggacgttttccatgaaatattttcttatcgttacnnnnnnnggttttgtcta--tgtgtaaact 360  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||  ||||||||||    
T  8103168 gaattataacaatttttggggagattgatttgctaaggacgttttccatgaaatattttcttatcgttactttttttggttttgtctatttgtgtaaact 8103267  T
Q  361 tgtaataatataaatttctctcacaatt 388  Q
    ||||||||||||||||||||||||||||    
T  8103268 tgtaataatataaatttctctcacaatt 8103295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 8102942 - 8103017
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||| ||||| |||||    
T  8102942 acctttaggtgtaccgcatatatactgcaccttgtatttatcttttaaaaaatttaaatataacattattatttta 8103017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 5973173 - 5973105
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    ||||||| |||||||||   ||||||||||||||||||||||||||||||||||||| || ||||||||    
T  5973173 ggtgtacaacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttta 5973105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 7944595 - 7944520
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||| ||||||| |||||||||  ||||||||||||||| |||||||||||||||||| ||| || ||||||||    
T  7944595 acctttgggtgtacaacatatatacggcaccttgtatttattttttaaaaaatttaaataaaacattgttctttta 7944520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 34868223 - 34868177
Alignment:
Q  28 caccttgtatttatcttttaaaaaatttaaatagaacgttattcttt 74  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  34868223 caccttgtatttatcttttaaaaaatttaaatagaacattattcttt 34868177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 42600812 - 42600873
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaataga 62  Q
    |||||| |||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||    
T  42600812 acctttgggtgtaccacatatatacggcaccttatatttatcttttaaaaaatataaataga 42600873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 5860810 - 5860754
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  5860810 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 5860754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 45475854 - 45475910
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  45475854 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 45475910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 3048585 - 3048530
Alignment:
Q  6 taggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatag 61  Q
    |||||||||| ||||||||  ||||||||||||||||||||||||||| |||||||    
T  3048585 taggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatag 3048530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 8646263 - 8646310
Alignment:
Q  29 accttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||    
T  8646263 accttgtatttatcttttaaaaaatttaaatagaacattgttctttta 8646310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 11290222 - 11290289
Alignment:
Q  9 gtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||| |||||||||   ||||||||||||||||||||||||||||||||| ||| || ||||||||    
T  11290222 gtgtacaacatatatacgacaccttgtatttatcttttaaaaaatttaaataaaacattgttctttta 11290289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 15078804 - 15078863
Alignment:
Q  17 catatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    ||||||||  ||||||| ||||||||||||||||| |||||||||||| |||||||||||    
T  15078804 catatatacagcaccttatatttatcttttaaaaattttaaatagaacattattctttta 15078863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 23606702 - 23606639
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| |||||||| ||||||||  ||||||| ||||||||||||||||||| ||||||||||    
T  23606702 acctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaac 23606639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 37430231 - 37430168
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||| |||||||| | ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  37430231 acctctaggtgtaacgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 37430168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 41879211 - 41879286
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||| | |||||| ||||||||  | ||||||||||||||||||||||||| |||||||||| || ||||||||    
T  41879211 acctttggatgtaccgcatatatacggtaccttgtatttatcttttaaaaaatataaatagaacattgttctttta 41879286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 9108551 - 9108596
Alignment:
Q  29 accttgtatttatcttttaaaaaatttaaatagaacgttattcttt 74  Q
    |||||||||||||||||||||||||||||||||||| || ||||||    
T  9108551 accttgtatttatcttttaaaaaatttaaatagaacattgttcttt 9108596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 10917421 - 10917482
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaataga 62  Q
    |||||| |||||||| ||||||||  ||||||| ||||||||||||||||||| ||||||||    
T  10917421 acctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaataga 10917482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 2952287 - 2952231
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  |||| |||||||||||||||||||||| ||||||||||    
T  2952287 ggtgtaccgcatatatacggcactttgtatttatcttttaaaaaatataaatagaac 2952231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 23798327 - 23798271
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  ||||||| ||||||||||||||||||| ||||||||||    
T  23798327 ggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaac 23798271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 30883366 - 30883422
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  |||| |||||||||||||||||||||| ||||||||||    
T  30883366 ggtgtaccgcatatatacggcacattgtatttatcttttaaaaaatataaatagaac 30883422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 5721615 - 5721652
Alignment:
Q  27 gcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||||||||||||||||||||| |||||||||||    
T  5721615 gcaccttgtatttatcttttaaaaaaattaaatagaac 5721652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 15167454 - 15167413
Alignment:
Q  35 tatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||||||||||||||||||||||||||| || ||||||||    
T  15167454 tatttatcttttaaaaaatttaaatagaacattgttctttta 15167413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 23941146 - 23941105
Alignment:
Q  19 tatatattgcaccttgtatttatcttttaaaaaatttaaata 60  Q
    |||||||  |||||||||||||||||||||||||||||||||    
T  23941146 tatatatgacaccttgtatttatcttttaaaaaatttaaata 23941105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 39332478 - 39332405
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattcttt 74  Q
    |||||| | |||||| | |||||||  ||||||||||||||||||| ||||| ||||||||||| || ||||||    
T  39332478 acctttggatgtaccgcttatatatgacaccttgtatttatctttttaaaaaattaaatagaacattgttcttt 39332405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 13534752 - 13534697
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  |||| |||||||||||||||||||||| ||||||||||    
T  13534752 ggtgtaccgcatatatacggcac-ttgtatttatcttttaaaaaatataaatagaac 13534697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 13624292 - 13624237
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  |||| |||||||||||||||||||||| ||||||||||    
T  13624292 ggtgtaccgcatatatacggcac-ttgtatttatcttttaaaaaatataaatagaac 13624237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 25561551 - 25561496
Alignment:
Q  17 catatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctt 73  Q
    ||||||||  ||||||||||||||||||| |||| ||||||||||||| ||||||||    
T  25561551 catatatacggcaccttgtatttatcttt-aaaagatttaaatagaacattattctt 25561496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 41677247 - 41677171
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaa-aaaatttaaatagaacgttattctttta 76  Q
    |||||||| |||| | ||||||||   || |||||||||||||||||| |||||||||||||||| || ||||||||    
T  41677247 acctttagatgtatcgcatatatacgacatcttgtatttatcttttaaaaaaatttaaatagaacattgttctttta 41677171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 34789935 - 34789872
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| ||||||| |||||||||   || |||||||||||||||||| | |||||||||||||    
T  34789935 acctttgggtgtacaacatatatacgacatcttgtatttatcttttaagagatttaaatagaac 34789872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 30674449 - 30674403
Alignment:
Q  28 caccttgtatttatcttttaaaaaatttaaatagaacgttattcttt 74  Q
    |||||| |||||||||||||||| ||||||||||||| || ||||||    
T  30674449 caccttatatttatcttttaaaacatttaaatagaacattgttcttt 30674403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 38009191 - 38009150
Alignment:
Q  35 tatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    ||||||||||||||||| |||||||||||| || ||||||||    
T  38009191 tatttatcttttaaaaattttaaatagaacattgttctttta 38009150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 7398481 - 7398557
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattcttttat 77  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||| || |||||||||    
T  7398481 acctttaggtgtatcacatatatatggcaccttgtatttatctttcaaaaaatttaaatagaacattgttcttttat 7398557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 19692124 - 19692187
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    ||||||||||||||| ||||||||| ||||||| ||||||||||||||||||| ||||||||||    
T  19692124 acctttaggtgtaccgcatatatatggcaccttatatttatcttttaaaaaatataaatagaac 19692187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 18201171 - 18201228
Alignment:
Q  5 ttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaataga 62  Q
    ||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  18201171 ttaggtgtaccacatatatatggcatcttgtatttatattttaaaaaatttaaataga 18201228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 33162411 - 33162350
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaataga 62  Q
    ||||||||||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||    
T  33162411 acctttaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataga 33162350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 23744828 - 23744900
Alignment:
Q  3 ctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttt 75  Q
    ||||||||||||| |||||||   ||||||||||||||||||||||||||||||| |||||| || |||||||    
T  23744828 ctttaggtgtaccgcatatatgcggcaccttgtatttatcttttaaaaaatttaattagaacattgttctttt 23744900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 2611326 - 2611259
Alignment:
Q  9 gtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    ||||||| ||||||||   ||||||||||||||||||||||||||||||||||||| || ||||||||    
T  2611326 gtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttta 2611259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 26254025 - 26254086
Alignment:
Q  3 ctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||| |||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  26254025 ctttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 26254086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 27237481 - 27237420
Alignment:
Q  15 cacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    ||||||||||   ||||||||||||||||||||||||||||||||||||| || ||||||||    
T  27237481 cacatatatacaacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttta 27237420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 8171604 - 8171548
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  8171604 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 8171548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9021872 - 9021812
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatag 61  Q
    |||||| |||||||| ||||||||  |||| ||||||||||||||||||||||||||||||    
T  9021872 acctttgggtgtaccgcatatatacggcacattgtatttatcttttaaaaaatttaaatag 9021812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 12596352 - 12596296
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||||||||||||  ||||||||||||||||||| ||||||| ||||||||||    
T  12596352 ggtgtaccacatatatacggcaccttgtatttatctttaaaaaaatataaatagaac 12596296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 77
Target Start/End: Original strand, 12981364 - 12981432
Alignment:
Q  9 gtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattcttttat 77  Q
    ||||||| | ||||||| | |||||||||||||||||||||||| ||||||||||| || |||||||||    
T  12981364 gtgtaccgcgtatatatggaaccttgtatttatcttttaaaaaaattaaatagaacattcttcttttat 12981432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 18776831 - 18776775
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  18776831 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 18776775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 36902996 - 36902924
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctt 73  Q
    |||||||||||||| |||||||||   || ||||||||||||| |||||||||||||||||||| || |||||    
T  36902996 acctttaggtgtacaacatatatacgacatcttgtatttatctattaaaaaatttaaatagaacattgttctt 36902924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 6765726 - 6765680
Alignment:
Q  28 caccttgtatttatcttttaaaaaatttaaatagaacgttattcttt 74  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||    
T  6765726 caccttgtatttatcttttaaaaaatttaaatagaacattgttcttt 6765680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 38414948 - 38414882
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgtt 67  Q
    |||||| |||||||||||||||||   |||||| |||||||||||||||||||  ||||||||||||    
T  38414948 acctttgggtgtaccacatatatacgtcaccttatatttatcttttaaaaaatacaaatagaacgtt 38414882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20091353 - 20091292
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaataga 62  Q
    |||||| |||||||| ||||||||  ||||||| ||||||||||||||||||| ||||||||    
T  20091353 acctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaataga 20091292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 23859105 - 23859174
Alignment:
Q  3 ctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattct 72  Q
    |||| |||||| | ||||||||  | || ||||||||||||||||||||||||||||||||| |||||||    
T  23859105 ctttgggtgtatcgcatatatacggtacattgtatttatcttttaaaaaatttaaatagaacattattct 23859174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 8239724 - 8239792
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||||||||||||||  |||| || ||||||| ||||||||||| |||||||||| ||| |||||||    
T  8239724 ggtgtaccacatatatacggcacattatatttattttttaaaaaatataaatagaacattactctttta 8239792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 12419536 - 12419492
Alignment:
Q  32 ttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    ||||||||||||||||||||||||||||||||| || ||||||||    
T  12419536 ttgtatttatcttttaaaaaatttaaatagaacattgttctttta 12419492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 29077257 - 29077313
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||   |||||||||||||||||||||||||| ||||||||||    
T  29077257 ggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaac 29077313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 10955522 - 10955577
Alignment:
Q  9 gtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    ||||||| ||||||||  ||||||| ||||||||||||||||||| ||||||||||    
T  10955522 gtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaac 10955577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 28749747 - 28749801
Alignment:
Q  9 gtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaa 63  Q
    ||||||| ||||||||  |||||||||||||||||||| |||||| |||||||||    
T  28749747 gtgtaccgcatatatacggcaccttgtatttatcttttcaaaaatataaatagaa 28749801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 48983916 - 48983855
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaataga 62  Q
    |||||| |||||||| ||||||||   |||||| ||||||||||||||||||| ||||||||    
T  48983916 acctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaataga 48983855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 64
Target Start/End: Complemental strand, 21763628 - 21763596
Alignment:
Q  32 ttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||||||||||||||||||||||||||||    
T  21763628 ttgtatttatcttttaaaaaatttaaatagaac 21763596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 24525750 - 24525694
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| |||||| |  ||||||| ||||||||||||||||||| ||||||||||    
T  24525750 ggtgtaccgcatatacacggcaccttatatttatcttttaaaaaatataaatagaac 24525694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 10329466 - 10329419
Alignment:
Q  17 catatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    ||||||||  ||||||| ||||||||||||||||||| ||||||||||    
T  10329466 catatatacggcaccttatatttatcttttaaaaaatataaatagaac 10329419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 9014219 - 9014177
Alignment:
Q  32 ttgtatttatcttttaaaaaatttaaatagaacgttattcttt 74  Q
    ||||||||||||||||||||||||||||| ||| || ||||||    
T  9014219 ttgtatttatcttttaaaaaatttaaataaaacattgttcttt 9014177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 121 - 157
Target Start/End: Original strand, 18201283 - 18201319
Alignment:
Q  121 gcagagccgagcctccggattcgtaggaactgccctg 157  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  18201283 gcagagccgagcctccggattcgtgggaacggccctg 18201319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 60
Target Start/End: Original strand, 20153262 - 20153290
Alignment:
Q  32 ttgtatttatcttttaaaaaatttaaata 60  Q
    |||||||||||||||||||||||||||||    
T  20153262 ttgtatttatcttttaaaaaatttaaata 20153290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 23020529 - 23020481
Alignment:
Q  28 caccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||| ||||||||||||||||||| |||||  |||||| ||||||||    
T  23020529 caccttatatttatcttttaaaaaatctaaatgaaacgttgttctttta 23020481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 36891639 - 36891683
Alignment:
Q  32 ttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    ||||||| ||| |||||||||| |||||||||| |||||||||||    
T  36891639 ttgtattcatcatttaaaaaatataaatagaacattattctttta 36891683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 38971286 - 38971341
Alignment:
Q  4 tttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaata 60  Q
    ||||||||||  |||||||||   ||||||||||||||||||| |||||||||||||    
T  38971286 tttaggtgtataacatatatacgacaccttgtatttatctttt-aaaaatttaaata 38971341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 47985042 - 47984978
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaa-aaaatttaaatagaac 64  Q
    |||||| |||||||| ||||||||  ||||||| ||||| |||||||| ||||| ||||||||||    
T  47985042 acctttgggtgtaccgcatatatacggcaccttatatttttcttttaaaaaaatataaatagaac 47984978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 3e-21; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 8420366 - 8420434
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    ||||||| |||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  8420366 ggtgtacaacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattattctttta 8420434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 42453437 - 42453512
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    ||||||||||||| | |||||||||  |||||||||||||||||||||||||||||||| |||| || ||||||||    
T  42453437 acctttaggtgtatcgcatatatatgacaccttgtatttatcttttaaaaaatttaaattgaacattgttctttta 42453512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 32319228 - 32319155
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattcttt 74  Q
    |||||| |||||||| ||||||||   ||| ||||||||||||||||||||||||||||||||| |||||||||    
T  32319228 acctttgggtgtaccgcatatatacaacactttgtatttatcttttaaaaaatttaaatagaacattattcttt 32319155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 3953962 - 3953894
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| |||||||||| || ||||||||    
T  3953962 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgttctttta 3953894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 9878760 - 9878698
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaa 63  Q
    |||||| |||||||| |||||||| |||||||| ||||||||||||||||||| |||||||||    
T  9878760 acctttgggtgtaccgcatatatactgcaccttatatttatcttttaaaaaatataaatagaa 9878698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 8073404 - 8073336
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||||| ||||||||   |||||||||||||||||||||||||| |||||||||| ||| |||||||    
T  8073404 ggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaacattactctttta 8073336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 21582811 - 21582879
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| |||||| ||| || ||||||||    
T  21582811 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaataaaacattgttctttta 21582879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 36716091 - 36716035
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  36716091 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 36716035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 54619269 - 54619213
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  54619269 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 54619213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 34290709 - 34290646
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| |||||||| ||||||||  ||||||| ||||||||||||||||||| ||||||||||    
T  34290709 acctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaac 34290646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 37168400 - 37168463
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| ||| |||||||||||||  ||||||| ||||||||||||||||||| ||||||||||    
T  37168400 acctttgggtataccacatatatacggcaccttatatttatcttttaaaaaatataaatagaac 37168463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 53149379 - 53149324
Alignment:
Q  9 gtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    ||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  53149379 gtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 53149324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 789969 - 790031
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaa 63  Q
    |||||| ||||||| ||||||||||  ||||||||||||||  ||||||||||||||||||||    
T  789969 acctttgggtgtacaacatatatatgacaccttgtatttattgtttaaaaaatttaaatagaa 790031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 50939306 - 50939245
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaataga 62  Q
    |||||| ||||||||| |||||||  ||||||| ||||||||||||||||||| ||||||||    
T  50939306 acctttgggtgtaccatatatatacggcaccttatatttatcttttaaaaaatataaataga 50939245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 26279602 - 26279650
Alignment:
Q  28 caccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||| |||||||||||||||||||||||||||||| || ||||||||    
T  26279602 caccttctatttatcttttaaaaaatttaaatagaacattgttctttta 26279650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 42098845 - 42098897
Alignment:
Q  12 taccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  42098845 taccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 42098897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 47467724 - 47467780
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| | ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  47467724 ggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 47467780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 54574893 - 54574825
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||||| ||||||||  | ||||||||||||| |||| ||||||||||||||||| || ||||||||    
T  54574893 ggtgtaccgcatatatacggtaccttgtatttatattttgaaaaatttaaatagaacattgttctttta 54574825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 44708510 - 44708573
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| ||||||||  |||||||  ||||||| ||||||||||||||||||| ||||||||||    
T  44708510 acctttgggtgtaccggatatatacggcaccttatatttatcttttaaaaaatataaatagaac 44708573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 53506957 - 53506894
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| |||||||| ||||||||  | ||||| ||||||||||||||||||| ||||||||||    
T  53506957 acctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatataaatagaac 53506894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 54407231 - 54407168
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| | |||||| ||||||||  ||||||| ||||||||||||||||||| ||||||||||    
T  54407231 acctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaac 54407168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 23641382 - 23641316
Alignment:
Q  10 tgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||| ||||||||   ||| |||||||||||||||||||||| ||||||||| ||| ||||||||    
T  23641382 tgtaccgcatatatacgacacattgtatttatcttttaaaaaatataaatagaatgttgttctttta 23641316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 38681157 - 38681103
Alignment:
Q  10 tgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| |||| |||  ||||||||||||||||||||||||||| ||||||||||    
T  38681157 tgtaccgcatacatacggcaccttgtatttatcttttaaaaaatataaatagaac 38681103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 43207302 - 43207248
Alignment:
Q  10 tgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| ||||||||  ||||||| ||||||||||||||||||| ||||||||||    
T  43207302 tgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaac 43207248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 36606004 - 36606061
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatc-ttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  |||||||||||||||| ||||||||||| ||||||||||    
T  36606004 ggtgtaccgcatatatacggcaccttgtatttatctttttaaaaaatataaatagaac 36606061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 49393123 - 49393195
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattcttt 74  Q
    |||||| ||||||| |||||||||   | ||||||||||||||||||||||||||||| ||||| || ||||||    
T  49393123 acctttgggtgtac-acatatatacgacgccttgtatttatcttttaaaaaatttaaagagaacattgttcttt 49393195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 18372543 - 18372579
Alignment:
Q  28 caccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||||||||||||||||||||| ||||||||||    
T  18372543 caccttgtatttatcttttaaaaaatataaatagaac 18372579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 27078631 - 27078579
Alignment:
Q  12 taccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||| ||||||||  |||| |||||||||||||||||||||| ||||||||||    
T  27078631 taccgcatatatacggcactttgtatttatcttttaaaaaatataaatagaac 27078579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 27084428 - 27084376
Alignment:
Q  12 taccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||| ||||||||  |||| |||||||||||||||||||||| ||||||||||    
T  27084428 taccgcatatatacggcactttgtatttatcttttaaaaaatataaatagaac 27084376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 50258689 - 50258633
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||   |||||||||||||| ||||||||||| ||||||||||    
T  50258689 ggtgtaccgcatatatacgacaccttgtatttattttttaaaaaatataaatagaac 50258633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 25855457 - 25855527
Alignment:
Q  3 ctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattcttt 74  Q
    |||| |||| || |||||||||   ||||||||||| ||||||||||||||||||||||||| || ||||||    
T  25855457 ctttgggtgcactacatatatacgacaccttgtatt-atcttttaaaaaatttaaatagaacattgttcttt 25855527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 28689418 - 28689371
Alignment:
Q  17 catatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    ||||||||  ||||||||||||||||||||  ||||||||||||||||    
T  28689418 catatatacggcaccttgtatttatctttttgaaaatttaaatagaac 28689371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 34425935 - 34426008
Alignment:
Q  3 ctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    ||||||||||| ||||||||||  |||||||||||||||||||||||||||| ||||||||| || ||||||||    
T  34425935 ctttaggtgtatcacatatatacggcaccttgtatttatcttttaaaaaattgaaatagaacattgttctttta 34426008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 27079041 - 27079104
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    ||||||||||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  27079041 acctttaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 27079104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 36868939 - 36868871
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||||||||||||||   ||||||||||||||||||||||||| ||||||||||| || ||||||||    
T  36868939 ggtgtaccacatatatacgacaccttgtatttatcttttaaaaaaattaaatagaacattgttctttta 36868871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 7338029 - 7338092
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    ||||||||||||||| ||||||||   |||||||||||||||||||||||||| ||||||||||    
T  7338029 acctttaggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaac 7338092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 2024710 - 2024637
Alignment:
Q  3 ctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||| |||||| ||||||||||  |||| |||||||||||||| |||||||||||||||||| || ||||||||    
T  2024710 ctttgggtgtatcacatatatacggcacattgtatttatctttaaaaaaatttaaatagaacattgttctttta 2024637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 606211 - 606259
Alignment:
Q  28 caccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||    
T  606211 caccttgtatttatcttttaaaaaatttaaatagaacattgttctttta 606259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 14318446 - 14318382
Alignment:
Q  10 tgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattcttt 74  Q
    |||| ||||||||||   ||||||||||||||||||||||||||||||||||||| || ||||||    
T  14318446 tgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttcttt 14318382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 19523236 - 19523292
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  19523236 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 19523292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 34756429 - 34756373
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  34756429 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 34756373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 9364321 - 9364384
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| |||||||| ||||||||  ||||||| ||||||||||||||||||| ||||||||||    
T  9364321 acctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaac 9364384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 28822412 - 28822349
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| |||||||| ||||||||  ||||||| ||||||||||||||||||| ||||||||||    
T  28822412 acctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaac 28822349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 30854367 - 30854422
Alignment:
Q  9 gtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    ||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  30854367 gtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 30854422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 28 - 70
Target Start/End: Original strand, 24395796 - 24395838
Alignment:
Q  28 caccttgtatttatcttttaaaaaatttaaatagaacgttatt 70  Q
    ||||||||||||||||||||||||||||||||||||| |||||    
T  24395796 caccttgtatttatcttttaaaaaatttaaatagaacattatt 24395838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 1366593 - 1366521
Alignment:
Q  4 tttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||||||| | ||||||||   || |||||||||||||| ||||||||||||||||||| || ||||||||    
T  1366593 tttaggtgtatcgcatatataccacatcttgtatttatcttataaaaaatttaaatagaacattgttctttta 1366521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 10407518 - 10407566
Alignment:
Q  28 caccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||||| |||||||||||||||||||||||||||| || ||||||||    
T  10407518 caccttgtgtttatcttttaaaaaatttaaatagaacattgttctttta 10407566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 22648806 - 22648734
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctt 73  Q
    |||||| | ||| |||||||||||   ||| ||||||||||||||||||||||||||||||||| || |||||    
T  22648806 acctttggatgtgccacatatatacgacacattgtatttatcttttaaaaaatttaaatagaacattgttctt 22648734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 31194671 - 31194619
Alignment:
Q  12 taccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  31194671 taccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 31194619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 36187942 - 36187886
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  ||||||||||||||| ||||||||||| ||||||||||    
T  36187942 ggtgtaccgcatatatacggcaccttgtatttatattttaaaaaatataaatagaac 36187886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 16799397 - 16799334
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| |||||||| ||||||||  ||||||| ||||||| ||||||||||| ||||||||||    
T  16799397 acctttgggtgtaccgcatatatacggcaccttatatttattttttaaaaaatataaatagaac 16799334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 33037810 - 33037885
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||| ||||||| |||||||||    | |||||||||||||||||||||||||||||| ||| || ||||||||    
T  33037810 acctttgggtgtacaacatatatacgatatcttgtatttatcttttaaaaaatttaaataaaacattgttctttta 33037885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 38869433 - 38869370
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| |||||||| ||||||||   |||||| ||||||||||||||||||| ||||||||||    
T  38869433 acctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaac 38869370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 26718988 - 26718946
Alignment:
Q  32 ttgtatttatcttttaaaaaatttaaatagaacgttattcttt 74  Q
    |||||||||||||||||||| |||||||||||| |||||||||    
T  26718988 ttgtatttatcttttaaaaattttaaatagaacattattcttt 26718946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 74
Target Start/End: Complemental strand, 26988732 - 26988690
Alignment:
Q  32 ttgtatttatcttttaaaaaatttaaatagaacgttattcttt 74  Q
    |||||||||||||||||||| |||||||||||| |||||||||    
T  26988732 ttgtatttatcttttaaaaattttaaatagaacattattcttt 26988690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 11242357 - 11242313
Alignment:
Q  32 ttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    ||||||||||||||||||||| ||||||||||| || ||||||||    
T  11242357 ttgtatttatcttttaaaaaaattaaatagaacattgttctttta 11242313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 15480152 - 15480096
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||   || ||||||||||||||||||||||| ||||||||||    
T  15480152 ggtgtaccgcatatatacgacatcttgtatttatcttttaaaaaatataaatagaac 15480096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 27530543 - 27530587
Alignment:
Q  31 cttgtatttatcttttaaaaaatttaaatagaacgttattctttt 75  Q
    |||||||| ||||||||||||||||||||||||| || |||||||    
T  27530543 cttgtattaatcttttaaaaaatttaaatagaacattgttctttt 27530587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 27924112 - 27924172
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatag 61  Q
    |||||| | |||||| ||||||||  ||||||| ||||||||||||||||||| |||||||    
T  27924112 acctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatag 27924172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 2274948 - 2274983
Alignment:
Q  29 accttgtatttatcttttaaaaaatttaaatagaac 64  Q
    ||||||||||||||||||||||||| ||||||||||    
T  2274948 accttgtatttatcttttaaaaaatataaatagaac 2274983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 16198864 - 16198801
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| |||||| | ||||||||   |||||| ||||||||||||||||||| ||||||||||    
T  16198864 acctttgggtgtatcgcatatatacgacaccttatatttatcttttaaaaaatataaatagaac 16198801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 32 - 63
Target Start/End: Original strand, 22875003 - 22875034
Alignment:
Q  32 ttgtatttatcttttaaaaaatttaaatagaa 63  Q
    ||||||||||||||||||||||||||||||||    
T  22875003 ttgtatttatcttttaaaaaatttaaatagaa 22875034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 31881488 - 31881441
Alignment:
Q  17 catatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    ||||||||  ||||| ||||||||||||||||||||| ||||||||||    
T  31881488 catatatacggcaccgtgtatttatcttttaaaaaatataaatagaac 31881441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 40389606 - 40389543
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| | |||||| ||||||||   |||||| ||||||||||||||||||| ||||||||||    
T  40389606 acctttggatgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaac 40389543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 2412149 - 2412191
Alignment:
Q  32 ttgtatttatcttttaaaaaatttaaatagaacgttattcttt 74  Q
    |||||||||| |||||||||||||||||||||| || ||||||    
T  2412149 ttgtatttattttttaaaaaatttaaatagaacattgttcttt 2412191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 10543730 - 10543776
Alignment:
Q  28 caccttgtatttatcttttaaaaaatttaaatagaacgttattcttt 74  Q
    |||||| ||||||||||||||||||||||| | |||| |||||||||    
T  10543730 caccttatatttatcttttaaaaaatttaagtggaacattattcttt 10543776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 35080806 - 35080765
Alignment:
Q  35 tatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||||||||||||||||||||||| ||| || ||||||||    
T  35080806 tatttatcttttaaaaaatttaaataaaacattgttctttta 35080765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 64
Target Start/End: Complemental strand, 2530936 - 2530904
Alignment:
Q  32 ttgtatttatcttttaaaaaatttaaatagaac 64  Q
    ||||||||||||||||||||| |||||||||||    
T  2530936 ttgtatttatcttttaaaaaacttaaatagaac 2530904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 16592137 - 16592081
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||   |||| ||||||||||||||| ||||| ||||||||||    
T  16592137 ggtgtaccgcatatatacgacaccctgtatttatcttttagaaaatataaatagaac 16592081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 40794366 - 40794322
Alignment:
Q  32 ttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||||| |||||||||||||||||||| ||| || ||||||||    
T  40794366 ttgtatttgtcttttaaaaaatttaaataaaacattgttctttta 40794322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 7e-19; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 38547101 - 38547045
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  38547101 ggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatttaaatagaac 38547045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 5027597 - 5027653
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  5027597 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 5027653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 5316728 - 5316784
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  5316728 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 5316784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 6771839 - 6771895
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  6771839 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 6771895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 14146348 - 14146404
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  14146348 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 14146404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 23185475 - 23185531
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  23185475 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 23185531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 16140096 - 16140159
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||| |||||||||| ||||||||   |||||||||||||||||||||||||| ||||||||||    
T  16140096 acctctaggtgtaccgcatatatacaacaccttgtatttatcttttaaaaaatataaatagaac 16140159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 1366948 - 1366887
Alignment:
Q  3 ctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||| |||||||| ||||||||  ||||||| ||||||||||||||||||| ||||||||||    
T  1366948 ctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaac 1366887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 4971683 - 4971627
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  | ||||||||||||||||||||||||| ||||||||||    
T  4971683 ggtgtaccgcatatatacggtaccttgtatttatcttttaaaaaatataaatagaac 4971627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 39134779 - 39134719
Alignment:
Q  17 catatatattgcaccttgtatttatctttt-aaaaaatttaaatagaacgttattctttta 76  Q
    ||||||||  |||||||||||||||||||| |||||||||||||||||| || ||||||||    
T  39134779 catatatacagcaccttgtatttatctttttaaaaaatttaaatagaacattgttctttta 39134719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 44655789 - 44655845
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||   |||||||||||||||||||||||||| ||||||||||    
T  44655789 ggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaac 44655845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 45758562 - 45758610
Alignment:
Q  28 caccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    ||||||| ||||||||||||||||||||||||||||| || ||||||||    
T  45758562 caccttgcatttatcttttaaaaaatttaaatagaacattgttctttta 45758610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 3406475 - 3406522
Alignment:
Q  17 catatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  3406475 catatatacggcaccttgtatttatcttttaaaaaatataaatagaac 3406522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 3440345 - 3440298
Alignment:
Q  17 catatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  3440345 catatatacggcaccttgtatttatcttttaaaaaatataaatagaac 3440298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 9173095 - 9173032
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| | |||||| ||||||||  ||||||| ||||||||||||||||||| ||||||||||    
T  9173095 acctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaac 9173032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 9181077 - 9181014
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| | |||||| ||||||||  ||||||| ||||||||||||||||||| ||||||||||    
T  9181077 acctttggatgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaac 9181014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 17168997 - 17169060
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| |||||||| ||||||||   |||||| ||||||||||||||||||| ||||||||||    
T  17168997 acctttgggtgtaccgcatatatacaacaccttatatttatcttttaaaaaatataaatagaac 17169060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 27559678 - 27559741
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| |||||||| ||||||||   |||||| ||||||||||||||||||| ||||||||||    
T  27559678 acctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaac 27559741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 50881471 - 50881534
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||| ||| |||||| ||||||||   |||||||||||||||||||||||||| ||||||||||    
T  50881471 acctctagatgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaac 50881534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 19955758 - 19955819
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaataga 62  Q
    |||||| |||||||| ||||||||  | ||||| ||||||||||||||||||| ||||||||    
T  19955758 acctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatataaataga 19955819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 40501862 - 40501801
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaataga 62  Q
    |||||| |||||||| ||||||||   |||||| ||||||||||||||||||| ||||||||    
T  40501862 acctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaataga 40501801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 21741002 - 21740946
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| | ||||||||  |||||||||||||||||||||||||||  |||||||||    
T  21741002 ggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaatacaaatagaac 21740946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 35392322 - 35392385
Alignment:
Q  12 taccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||| ||||||||  |||||||||||||||| || |||||||||||||| ||| |||||||||||    
T  35392322 taccgcatatatacggcaccttgtatttatcctt-aaaaaatttaaataaaacattattctttta 35392385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 38853590 - 38853626
Alignment:
Q  28 caccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    ||||||||||||||| |||||||||||||||||||||    
T  38853590 caccttgtatttatcatttaaaaaatttaaatagaac 38853626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 22865532 - 22865470
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| ||||||||  |||||||  ||| ||||||||||||||||||||||| ||||||||||    
T  22865532 acctttgggtgtaccg-atatatagagcatcttgtatttatcttttaaaaaatataaatagaac 22865470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 50146337 - 50146412
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||| ||| || |||||||| |  |||||||| |||||||||| ||||| |||||||||||| || ||||||||    
T  50146337 acctttgggtctatcacatatacacggcaccttgcatttatctttcaaaaagtttaaatagaacattgttctttta 50146412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 158
Target Start/End: Complemental strand, 39134671 - 39134637
Alignment:
Q  124 gagccgagcctccggattcgtaggaactgccctgt 158  Q
    ||||||||||||||||||||||||||| |||||||    
T  39134671 gagccgagcctccggattcgtaggaacggccctgt 39134637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 60
Target Start/End: Original strand, 26804016 - 26804045
Alignment:
Q  31 cttgtatttatcttttaaaaaatttaaata 60  Q
    ||||||||||||||||||||||||||||||    
T  26804016 cttgtatttatcttttaaaaaatttaaata 26804045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 64
Target Start/End: Complemental strand, 27906775 - 27906738
Alignment:
Q  27 gcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    ||||||||||||||||||||||||||| ||||| ||||    
T  27906775 gcaccttgtatttatcttttaaaaaatataaatggaac 27906738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 5533369 - 5533429
Alignment:
Q  17 catatatattgcaccttgtatttatctttt-aaaaaatttaaatagaacgttattctttta 76  Q
    ||||||||  ||||||||| |||||||||| |||||||||||||||||  || ||||||||    
T  5533369 catatatacggcaccttgtgtttatcttttaaaaaaatttaaatagaatattgttctttta 5533429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 6221728 - 6221791
Alignment:
Q  10 tgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattcttt 74  Q
    |||||| | ||||||  |||| ||||||||||||||| ||||||||||||||||| || ||||||    
T  6221728 tgtaccgcttatatacggcacattgtatttatctttt-aaaaatttaaatagaacattgttcttt 6221791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 64
Target Start/End: Original strand, 6889683 - 6889715
Alignment:
Q  32 ttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||||||||||||||||| ||||||||||    
T  6889683 ttgtatttatcttttaaaaaatataaatagaac 6889715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 64
Target Start/End: Original strand, 6891529 - 6891561
Alignment:
Q  32 ttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||||||||||||||||| ||||||||||    
T  6891529 ttgtatttatcttttaaaaaatataaatagaac 6891561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 17322664 - 17322620
Alignment:
Q  32 ttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||||||||||| ||||||| |||||||||| || ||||||||    
T  17322664 ttgtatttatctttaaaaaaatataaatagaacattgttctttta 17322620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 64
Target Start/End: Complemental strand, 41697178 - 41697146
Alignment:
Q  32 ttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||||||||||||||||| ||||||||||    
T  41697178 ttgtatttatcttttaaaaaatataaatagaac 41697146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 16097037 - 16097112
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||| |||||||  ||||||||  |||||||||||||||||||||||||||||||||||||| || ||||||||    
T  16097037 acctttgggtgtacatcatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgttctttta 16097112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 24035618 - 24035543
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    ||||||||||||| | ||| ||||  |||||||||||||||||||||||||||||||||||||| || ||||||||    
T  24035618 acctttaggtgtatcgcatttatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgttctttta 24035543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 42029174 - 42029247
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattcttt 74  Q
    |||||||||||||| |||| |||||  |||||| |||||||||||||||||||||||||||||| || ||||||    
T  42029174 acctttaggtgtacaacatgtatatgacaccttatatttatcttttaaaaaatttaaatagaacattgttcttt 42029247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 12337514 - 12337458
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    ||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||    
T  12337514 ggtgtaccacatatatatgacaccttgtatttatcttttaaaaaatataaatagaac 12337458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 34694011 - 34694067
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  34694011 ggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 34694067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 34716423 - 34716479
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  34716423 ggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 34716479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 3155246 - 3155309
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||| |||||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  3155246 acctctaggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 3155309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 10762638 - 10762575
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| |||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||||    
T  10762638 acctttgggtgtaccacatatataccgcaccttatatttatcttttaaaaaatataaatagaac 10762575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 27506813 - 27506752
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaataga 62  Q
    |||||| |||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||    
T  27506813 acctttgggtgtaccacatatatacggcaccttatatttatcttttaaaaaatataaataga 27506752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 4505930 - 4505986
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  4505930 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 4505986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 8907145 - 8907077
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||||| ||||||||  || |||||||||||||||||||||||| |||||||||| ||| |||||||    
T  8907145 ggtgtaccgcatatatacggcgccttgtatttatcttttaaaaaatataaatagaacattactctttta 8907077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 38400843 - 38400899
Alignment:
Q  17 catatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctt 73  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||| || |||||    
T  38400843 catatatatgacaccttgtatttatcttttaaaaaatttaaatagaacattgttctt 38400899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 13800610 - 13800543
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttt 75  Q
    |||||| | ||||||||  ||||||| |||||||||||||||||||||||||||||| || |||||||    
T  13800610 ggtgtatcgcatatatacggcaccttatatttatcttttaaaaaatttaaatagaacattgttctttt 13800543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 16227434 - 16227379
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaa 63  Q
    |||||| ||||||||||   ||||||||||||||||||||||||||||||||||||    
T  16227434 ggtgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaa 16227379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 24410466 - 24410529
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| |||||||| ||||||||  ||||||| ||||||||||||||||||| ||||||||||    
T  24410466 acctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaac 24410529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 21665764 - 21665698
Alignment:
Q  10 tgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||| ||||||||||   |||| |||||||||||||||||||||||||||||||| || ||||||||    
T  21665764 tgtatcacatatatacgacaccgtgtatttatcttttaaaaaatttaaatagaacattgttctttta 21665698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 3953042 - 3953098
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||| ||||  ||||||||||||||||||||||||||| ||||||||||    
T  3953042 ggtgtaccgcatgtatacggcaccttgtatttatcttttaaaaaatataaatagaac 3953098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 6965043 - 6965099
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  |||| |||||||||||||||||||||| ||||||||||    
T  6965043 ggtgtaccgcatatatacggcactttgtatttatcttttaaaaaatataaatagaac 6965099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 7162824 - 7162876
Alignment:
Q  12 taccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  7162824 taccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 7162876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 9046058 - 9046134
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatctttt-aaaaaatttaaatagaacgttattctttta 76  Q
    |||||| |||||||| ||||||||  ||||||| |||||||||||| ||||||| |||||||||| || ||||||||    
T  9046058 acctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaaatataaatagaacattgttctttta 9046134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 26716157 - 26716221
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatctttt-aaaaaatttaaatagaac 64  Q
    |||||| |||||||| ||||||||| ||||||| |||||||||||| ||||||| ||||||||||    
T  26716157 acctttgggtgtaccgcatatatatggcaccttatatttatcttttaaaaaaatataaatagaac 26716221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 40636174 - 40636230
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||   |||||||||||||||||||||||||| ||||||||||    
T  40636174 ggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaac 40636230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 29939935 - 29939872
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| |||||||| ||||||||   ||||||||||||||||| |||||||| ||||||||||    
T  29939935 acctttgggtgtaccgcatatatacgacaccttgtatttatcttgtaaaaaatataaatagaac 29939872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 10252472 - 10252518
Alignment:
Q  28 caccttgtatttatcttttaaaaaatttaaatagaacgttattcttt 74  Q
    |||||||||||||||||||||||||||||||| |||| || ||||||    
T  10252472 caccttgtatttatcttttaaaaaatttaaattgaacatttttcttt 10252518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 22727497 - 22727455
Alignment:
Q  34 gtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    ||||||||||||||||||||||||||||||| || ||||||||    
T  22727497 gtatttatcttttaaaaaatttaaatagaacattgttctttta 22727455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 5952781 - 5952736
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaat 53  Q
    |||||||| ||||||||  |||||||||||||||||||||||||||    
T  5952781 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaat 5952736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 28425756 - 28425708
Alignment:
Q  28 caccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||||||||||||||||||||  |||||||||||| || ||||||||    
T  28425756 caccttgtatttatcttttaaaatttttaaatagaacattgttctttta 28425708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 7742191 - 7742131
Alignment:
Q  17 catatatattgcaccttgtatttatcttttaa-aaaatttaaatagaacgttattctttta 76  Q
    |||||||||  ||| ||||||||||||||||| ||||| |||||||||| || ||||||||    
T  7742191 catatatatgacacattgtatttatcttttaaaaaaatataaatagaacattgttctttta 7742131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 11952624 - 11952588
Alignment:
Q  38 ttatcttttaaaaaatttaaatagaacgttattcttt 74  Q
    ||||||||||||||||||||||||||| || ||||||    
T  11952624 ttatcttttaaaaaatttaaatagaacattgttcttt 11952588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 324 - 256
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||||| ||||||||   ||||||||||||||||||||||||||||||||||||| || ||||||||    
T  324 ggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaacattgttctttta 256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 33774157 - 33774225
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| |||||||||| ||| |||||||    
T  33774157 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattactctttta 33774225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 24711064 - 24711009
Alignment:
Q  9 gtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    ||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  24711064 gtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 24711009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 34397890 - 34397953
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    ||||||||||||||| ||||||||   |||||||||||||||||||||||||| ||||||||||    
T  34397890 acctttaggtgtaccgcatatatacgtcaccttgtatttatcttttaaaaaatataaatagaac 34397953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 13727465 - 13727409
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  13727465 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 13727409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 21280585 - 21280641
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  21280585 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 21280641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 21479534 - 21479590
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  21479534 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 21479590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 19737765 - 19737702
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||| |||||||||| ||||||||  ||||||||||||||||||| ||||||| ||||||||||    
T  19737765 acctctaggtgtaccgcatatatacggcaccttgtatttatctttaaaaaaatataaatagaac 19737702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 20711793 - 20711730
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| |||||||| ||||||||  ||||||| ||||||||||||||||||| ||||||||||    
T  20711793 acctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaac 20711730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 1155913 - 1155859
Alignment:
Q  10 tgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| |||||||||  |||||||||||||||||||||||||| ||||||||||    
T  1155913 tgtaccgcatatatatgacaccttgtatttatcttttaaaaaatataaatagaac 1155859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 27788761 - 27788699
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaa 63  Q
    |||||| |||||||| ||||||||  ||||||| ||||||||||||||||||| |||||||||    
T  27788761 acctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaa 27788699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 2477650 - 2477594
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| | |||||||||  |||||||||||||||||||||||||||||||| ||||    
T  2477650 ggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaatttaaattgaac 2477594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 21183746 - 21183686
Alignment:
Q  3 ctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaa 63  Q
    |||| |||||||||||||||||    || ||||||||||||||||||||||||||||||||    
T  21183746 ctttgggtgtaccacatatatacgctactttgtatttatcttttaaaaaatttaaatagaa 21183686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 30832590 - 30832534
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||||||||||||  ||| ||||||||||| ||||||||||| ||||||||||    
T  30832590 ggtgtaccacatatatacggcatcttgtatttattttttaaaaaatgtaaatagaac 30832534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 28075816 - 28075879
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| |||||| | ||||||||  ||||||| ||||||||||||||||||| ||||||||||    
T  28075816 acctttgggtgtatcgcatatatacggcaccttatatttatcttttaaaaaatataaatagaac 28075879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 30121811 - 30121868
Alignment:
Q  17 catatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattcttt 74  Q
    |||||||||  |||||||||||||| |||||||||||||||||| ||| || ||||||    
T  30121811 catatatatgacaccttgtatttattttttaaaaaatttaaataaaacattgttcttt 30121868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 17353994 - 17354050
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||   |||||| ||||||||||||||||||| ||||||||||    
T  17353994 ggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaac 17354050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 64
Target Start/End: Complemental strand, 27314244 - 27314188
Alignment:
Q  9 gtgtaccacatatatattgcaccttgtatttatc-ttttaaaaaatttaaatagaac 64  Q
    ||||||| ||||||||  |||||||||||||||| ||||||||||| ||||||||||    
T  27314244 gtgtaccgcatatatacggcaccttgtatttatctttttaaaaaatataaatagaac 27314188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 4036981 - 4037031
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaa 51  Q
    |||||| ||||||||| |||||||  ||||||||||||||||| |||||||    
T  4036981 acctttgggtgtaccatatatatacggcaccttgtatttatctcttaaaaa 4037031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 64
Target Start/End: Original strand, 6159480 - 6159534
Alignment:
Q  10 tgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| ||||||||   ||| |||||||||||||||||||||| ||||||||||    
T  6159480 tgtaccgcatatatacgacacattgtatttatcttttaaaaaatataaatagaac 6159534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 20611850 - 20611886
Alignment:
Q  28 caccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    ||||||||||||||| |||||||||||||| ||||||    
T  20611850 caccttgtatttatcgtttaaaaaatttaagtagaac 20611886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 2e-16; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 32915427 - 32915483
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  32915427 ggtgtaccacatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 32915483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 47129029 - 47129097
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| |||||||||| || ||||||||    
T  47129029 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaacattgttctttta 47129097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 51691980 - 51691924
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||    
T  51691980 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatttaaatagaac 51691924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 52468336 - 52468396
Alignment:
Q  16 acatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||| || ||||||||    
T  52468336 acatatatacggcaccttgtatttatcttttaaaaaatttaaatagaacattgttctttta 52468396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 54780812 - 54780875
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| |||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  54780812 acctttgggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 54780875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 39329462 - 39329389
Alignment:
Q  3 ctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||| |||||| ||||||||||   ||||||||||||||||||||||||||||||| ||||| || ||||||||    
T  39329462 ctttgggtgtatcacatatatacaacaccttgtatttatcttttaaaaaatttaaagagaacattgttctttta 39329389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 10042069 - 10041997
Alignment:
Q  4 tttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||||||| |||||| |||  ||||||||||||||| |||| ||||||||||||||||| || ||||||||    
T  10042069 tttaggtgtatcacatacatacggcaccttgtatttatttttttaaaaatttaaatagaacattgttctttta 10041997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 10428262 - 10428206
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  10428262 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 10428206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 36118523 - 36118467
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| ||||||||||   |||||||||||||||||||||||||||||||||||||    
T  36118523 ggtgtatcacatatatacgacaccttgtatttatcttttaaaaaatttaaatagaac 36118467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 38209656 - 38209600
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  38209656 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 38209600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 48209282 - 48209338
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  48209282 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 48209338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 2790813 - 2790738
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||| |||||||| ||||||||  | ||||| ||||||||||||||||||| |||||||||| || ||||||||    
T  2790813 acctttgggtgtaccgcatatatacggtaccttatatttatcttttaaaaaatataaatagaacattgttctttta 2790738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 17679442 - 17679497
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaa 63  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||| |||||||||    
T  17679442 ggtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaa 17679497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 24396977 - 24397028
Alignment:
Q  9 gtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaata 60  Q
    ||||| |||||||||| |||||||| ||||||||||||||||||||||||||    
T  24396977 gtgtatcacatatatactgcaccttatatttatcttttaaaaaatttaaata 24397028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 37514702 - 37514757
Alignment:
Q  9 gtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    ||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  37514702 gtgtaccgcatatatacggcaccttgtatttatcttttaaaaaatataaatagaac 37514757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 37777295 - 37777232
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| |||||||| ||||||||  ||||||| ||||||||||||||||||| ||||||||||    
T  37777295 acctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaac 37777232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 43455603 - 43455540
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| |||||||| ||||||||  ||||||| ||||||||||||||||||| ||||||||||    
T  43455603 acctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaac 43455540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 39655326 - 39655252
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttt 75  Q
    |||||| |||||||| |||||||   | || ||||||||||||||||||||||||||||||||| || |||||||    
T  39655326 acctttgggtgtaccgcatatatgcggaactttgtatttatcttttaaaaaatttaaatagaacattgttctttt 39655252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 10978942 - 10978998
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||   |||||||||||||||||||||||||| ||||||||||    
T  10978942 ggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatataaatagaac 10978998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 27112072 - 27112128
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| | |||||||||  |||||||||||||||||||||||||||||||| ||||    
T  27112072 ggtgtatcgcatatatatgtcaccttgtatttatcttttaaaaaatttaaattgaac 27112128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 34768639 - 34768583
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  ||||||| ||||||||||||||||||| ||||||||||    
T  34768639 ggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaatagaac 34768583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 1105567 - 1105630
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||| |||||||||| ||||||||    ||||||||||||||||||||||||| ||||||||||    
T  1105567 acctctaggtgtaccgcatatatacgataccttgtatttatcttttaaaaaatataaatagaac 1105630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 2135366 - 2135331
Alignment:
Q  28 caccttgtatttatcttttaaaaaatttaaatagaa 63  Q
    ||||||||||||||||||||||||||||||||||||    
T  2135366 caccttgtatttatcttttaaaaaatttaaatagaa 2135331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 9578728 - 9578673
Alignment:
Q  10 tgtaccacatatatattgc-accttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| ||||||||| || ||||||||||||||||||||||||| ||||||||||    
T  9578728 tgtaccgcatatatatggctaccttgtatttatcttttaaaaaatataaatagaac 9578673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 24614018 - 24614061
Alignment:
Q  31 cttgtatttatcttttaaaaaatttaaatagaacgttattcttt 74  Q
    |||||||||||||||||||||||||||||||||| || ||||||    
T  24614018 cttgtatttatcttttaaaaaatttaaatagaacattgttcttt 24614061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 30507162 - 30507119
Alignment:
Q  33 tgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||||||||||||||||||||||||||||| || ||||||||    
T  30507162 tgtatttatcttttaaaaaatttaaatagaacattgttctttta 30507119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 32128619 - 32128682
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| |||||||| ||||||||   |||||| ||||||||||||||||||| ||||||||||    
T  32128619 acctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaac 32128682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 34027614 - 34027677
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| |||||||| ||||||||   |||||| ||||||||||||||||||| ||||||||||    
T  34027614 acctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaac 34027677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 54083312 - 54083253
Alignment:
Q  3 ctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaataga 62  Q
    |||| |||||||| ||||||||  ||||||| ||||||||||||||||||| ||||||||    
T  54083312 ctttgggtgtaccgcatatatacggcaccttatatttatcttttaaaaaatataaataga 54083253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 5128898 - 5128852
Alignment:
Q  17 catatatattgcaccttgtatttatcttttaaaaaatttaaatagaa 63  Q
    ||||||||  ||||||||||||||||||||||||||| |||||||||    
T  5128898 catatatacggcaccttgtatttatcttttaaaaaatataaatagaa 5128852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 31 - 64
Target Start/End: Original strand, 15735155 - 15735188
Alignment:
Q  31 cttgtatttatcttttaaaaaatttaaatagaac 64  Q
    ||||||||||||||||||||||||||||||||||    
T  15735155 cttgtatttatcttttaaaaaatttaaatagaac 15735188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 158
Target Start/End: Complemental strand, 51691874 - 51691837
Alignment:
Q  121 gcagagccgagcctccggattcgtaggaactgccctgt 158  Q
    |||||||||||||||||||||||||||||| |||||||    
T  51691874 gcagagccgagcctccggattcgtaggaacggccctgt 51691837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 4167963 - 4167911
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaat 53  Q
    |||||| |||||| | ||||||||  |||||||||||||||||||||||||||    
T  4167963 acctttgggtgtatcgcatatatacggcaccttgtatttatcttttaaaaaat 4167911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 13460269 - 13460305
Alignment:
Q  28 caccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||||||||||||||||||||| ||||||||||    
T  13460269 caccttgtatttatcttttaaaaaatataaatagaac 13460305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 35465145 - 35465216
Alignment:
Q  4 tttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||||||||| ||||||||  ||||||| |||||||||| |||||||| |||||| ||| || ||||||||    
T  35465145 tttaggtgtaccgcatatata-cgcaccttttatttatcttgtaaaaaatataaatataacattgttctttta 35465216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 35779397 - 35779345
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaat 53  Q
    |||||| |||||||| ||||||||   ||||||||||||||||||||||||||    
T  35779397 acctttgggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaat 35779345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 36178734 - 36178770
Alignment:
Q  28 caccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||||||||||||||||| ||||||||||||||    
T  36178734 caccttgtatttatcttttaaataatttaaatagaac 36178770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 36362927 - 36362868
Alignment:
Q  17 catatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    ||||||||  |||| ||||||||||||||||||||||||||| ||| | || ||||||||    
T  36362927 catatatacggcactttgtatttatcttttaaaaaatttaaacagagcattgttctttta 36362868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 45656226 - 45656269
Alignment:
Q  17 catatatattgcaccttgtatttatcttttaaaaaatttaaata 60  Q
    |||||||||  ||||||| |||||||||||||||||||||||||    
T  45656226 catatatatgacaccttgcatttatcttttaaaaaatttaaata 45656269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 11906954 - 11906904
Alignment:
Q  10 tgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaata 60  Q
    |||||||||||||||  | |||||||||||||||||  |||||||||||||    
T  11906954 tgtaccacatatatacggtaccttgtatttatctttataaaaatttaaata 11906904  T

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Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 19498563 - 19498600
Alignment:
Q  27 gcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  19498563 gcaccttatatttatcttttaaaaaatataaatagaac 19498600  T

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Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 23508556 - 23508519
Alignment:
Q  28 caccttgtatttatcttttaaaaaatt-taaatagaac 64  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  23508556 caccttgtatttatcttttaaaaaattataaatagaac 23508519  T

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Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 40217294 - 40217327
Alignment:
Q  28 caccttgtatttatcttttaaaaaatttaaatag 61  Q
    |||||| |||||||||||||||||||||||||||    
T  40217294 caccttatatttatcttttaaaaaatttaaatag 40217327  T

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Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 55255318 - 55255355
Alignment:
Q  27 gcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    ||||||||||||||||||||||||||| ||||| ||||    
T  55255318 gcaccttgtatttatcttttaaaaaatataaatggaac 55255355  T

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Target: scaffold1320 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 1400 - 1459
Alignment:
Q  17 catatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    ||||||||  ||||||| ||||||||||||||||| |||||||||||| |||||||||||    
T  1400 catatatacagcaccttatatttatcttttaaaaattttaaatagaacattattctttta 1459  T

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Target: scaffold0182 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 24059 - 24004
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaa 63  Q
    |||||||| ||||||||   ||||||||||||||||||||||||||||||||||||    
T  24059 ggtgtaccgcatatatacgacaccttgtatttatcttttaaaaaatttaaatagaa 24004  T

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Target: scaffold0039 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 106568 - 106643
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    |||||| |||||||| ||||||||   |||||| ||||||||||||||||||| |||||||||| || ||||||||    
T  106568 acctttgggtgtaccgcatatatacgacaccttatatttatcttttaaaaaatataaatagaacattgttctttta 106643  T

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Target: scaffold0018 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 173583 - 173520
Alignment:
Q  1 acctttaggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||| |||||| | ||||||||  | ||||||||||||||||||||||||||||||||||||    
T  173583 acctttgggtgtatcgcatatatacggtaccttgtatttatcttttaaaaaatttaaatagaac 173520  T

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Target: scaffold0012 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 206555 - 206489
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaacgttattcttt 74  Q
    |||||||| ||||||||   |||||||||||||||||||| |||||||||||||||| || ||||||    
T  206555 ggtgtaccgcatatatacgacaccttgtatttatcttttacaaaatttaaatagaacattcttcttt 206489  T

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Target: scaffold0097 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 38982 - 39018
Alignment:
Q  28 caccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||||||||||||||||||||||||||||||||    
T  38982 caccttgtatttatcttttaaaaaatttaaatagaac 39018  T

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Target: scaffold0070 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 1380 - 1436
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||| ||||||||  ||| ||||||||||||||||||||||| ||||||||||    
T  1380 ggtgtaccgcatatatacggcagcttgtatttatcttttaaaaaatataaatagaac 1436  T

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Target: scaffold0227 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 16123 - 16158
Alignment:
Q  29 accttgtatttatcttttaaaaaatttaaatagaac 64  Q
    ||||||||||||||||||||||||||||||||||||    
T  16123 accttgtatttatcttttaaaaaatttaaatagaac 16158  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 40122 - 40191
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatctttt--aaaaaatttaaatagaacgttattctttt 75  Q
    ||||||| ||||| |||  ||||||||||||||||||||  |||||| ||||||||||| || |||||||    
T  40122 ggtgtacaacataaatacggcaccttgtatttatcttttaaaaaaaaattaaatagaacattgttctttt 40191  T

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Target: scaffold0022; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 75
Target Start/End: Original strand, 138182 - 138251
Alignment:
Q  8 ggtgtaccacatatatattgcaccttgtatttatctttt--aaaaaatttaaatagaacgttattctttt 75  Q
    ||||||| ||||| |||  ||||||||||||||||||||  |||||| ||||||||||| || |||||||    
T  138182 ggtgtacaacataaatacggcaccttgtatttatcttttaaaaaaaaattaaatagaacattgttctttt 138251  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 230897 - 230857
Alignment:
Q  36 atttatcttttaaaaaatttaaatagaacgttattctttta 76  Q
    ||||||||||||| ||||||||||||||| || ||||||||    
T  230897 atttatcttttaacaaatttaaatagaacattgttctttta 230857  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 32 - 64
Target Start/End: Original strand, 183121 - 183153
Alignment:
Q  32 ttgtatttatcttttaaaaaatttaaatagaac 64  Q
    |||||||||||||||||||||| ||||||||||    
T  183121 ttgtatttatcttttaaaaaatataaatagaac 183153  T

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