View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8959_low_16 (Length: 496)

Name: NF8959_low_16
Description: NF8959
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8959_low_16
NF8959_low_16
[»] chr5 (53 HSPs)
chr5 (19-477)||(38341275-38341733)
chr5 (232-425)||(12576919-12577116)
chr5 (223-337)||(9235166-9235279)
chr5 (223-384)||(7359311-7359472)
chr5 (223-379)||(14749382-14749539)
chr5 (223-314)||(14667911-14668003)
chr5 (220-314)||(6889133-6889228)
chr5 (228-321)||(30588580-30588674)
chr5 (223-385)||(32516625-32516787)
chr5 (230-319)||(23980079-23980169)
chr5 (223-372)||(38684562-38684712)
chr5 (219-326)||(15252790-15252894)
chr5 (170-278)||(43557835-43557938)
chr5 (262-368)||(2713030-2713137)
chr5 (220-308)||(11675675-11675765)
chr5 (223-314)||(29922424-29922516)
chr5 (223-321)||(28015-28114)
chr5 (223-286)||(418084-418147)
chr5 (233-326)||(17340496-17340590)
chr5 (170-303)||(43475390-43475519)
chr5 (223-335)||(6859500-6859613)
chr5 (261-385)||(9917538-9917663)
chr5 (223-280)||(20367068-20367125)
chr5 (262-374)||(31636009-31636122)
chr5 (234-337)||(5305756-5305857)
chr5 (231-337)||(7678595-7678701)
chr5 (215-286)||(36200898-36200969)
chr5 (285-379)||(15489605-15489699)
chr5 (223-326)||(1275392-1275496)
chr5 (170-254)||(5860035-5860114)
chr5 (270-372)||(21952439-21952540)
chr5 (223-255)||(42504297-42504329)
chr5 (232-338)||(2066113-2066220)
chr5 (228-326)||(27998569-27998668)
chr5 (220-254)||(1104754-1104788)
chr5 (228-282)||(18350957-18351011)
chr5 (223-277)||(21193702-21193756)
chr5 (230-280)||(35615458-35615508)
chr5 (232-341)||(36123241-36123351)
chr5 (88-134)||(38341767-38341813)
chr5 (239-324)||(38501484-38501570)
chr5 (285-338)||(3775180-3775233)
chr5 (170-223)||(14665939-14665992)
chr5 (388-425)||(27249234-27249271)
chr5 (381-447)||(28676591-28676653)
chr5 (262-338)||(33667551-33667628)
chr5 (223-331)||(38685090-38685199)
chr5 (285-325)||(1001295-1001335)
chr5 (386-447)||(14667759-14667816)
chr5 (239-314)||(15168911-15168987)
chr5 (389-425)||(32516570-32516606)
chr5 (381-425)||(42199300-42199344)
chr5 (262-385)||(42199355-42199479)
[»] chr8 (60 HSPs)
chr8 (223-385)||(30559762-30559925)
chr8 (170-379)||(29520725-29520929)
chr8 (170-319)||(30198268-30198413)
chr8 (237-334)||(35643670-35643768)
chr8 (223-307)||(16035777-16035862)
chr8 (233-337)||(2216405-2216508)
chr8 (236-379)||(10079970-10080114)
chr8 (235-374)||(16917263-16917403)
chr8 (223-374)||(43904715-43904867)
chr8 (231-317)||(24399847-24399934)
chr8 (264-375)||(16351457-16351569)
chr8 (227-321)||(17491708-17491803)
chr8 (223-321)||(35914651-35914750)
chr8 (288-379)||(38178376-38178467)
chr8 (223-379)||(32931036-32931192)
chr8 (170-286)||(490504-490615)
chr8 (262-385)||(7531733-7531857)
chr8 (232-331)||(9904941-9905041)
chr8 (227-314)||(39967553-39967641)
chr8 (223-286)||(21425215-21425278)
chr8 (231-337)||(30783100-30783207)
chr8 (227-321)||(33827811-33827906)
chr8 (223-331)||(13589602-13589711)
chr8 (223-331)||(28169515-28169624)
chr8 (223-280)||(31715995-31716052)
chr8 (223-379)||(35362700-35362857)
chr8 (224-379)||(5908721-5908877)
chr8 (223-308)||(41444389-41444476)
chr8 (236-338)||(79143-79246)
chr8 (223-305)||(2518448-2518531)
chr8 (231-341)||(16994502-16994613)
chr8 (228-326)||(23023353-23023452)
chr8 (223-305)||(36069751-36069834)
chr8 (219-286)||(41971836-41971903)
chr8 (223-266)||(42584548-42584591)
chr8 (237-338)||(45512558-45512661)
chr8 (261-338)||(4011199-4011277)
chr8 (223-297)||(33076282-33076356)
chr8 (223-315)||(7615641-7615734)
chr8 (224-303)||(16705898-16705979)
chr8 (223-379)||(29700351-29700508)
chr8 (223-306)||(14459043-14459127)
chr8 (262-317)||(16971843-16971899)
chr8 (232-351)||(23492138-23492257)
chr8 (223-326)||(24558611-24558715)
chr8 (381-425)||(35643825-35643869)
chr8 (261-323)||(24739936-24739999)
chr8 (284-371)||(25985601-25985688)
chr8 (260-323)||(28269766-28269829)
chr8 (357-408)||(38668075-38668126)
chr8 (284-379)||(39953376-39953471)
chr8 (223-301)||(45041366-45041444)
chr8 (383-425)||(13171875-13171917)
chr8 (284-374)||(32043670-32043760)
chr8 (285-379)||(45331681-45331775)
chr8 (232-320)||(10108947-10109036)
chr8 (170-223)||(35324000-35324053)
chr8 (240-371)||(37826374-37826502)
chr8 (381-425)||(6483271-6483315)
chr8 (381-425)||(9695645-9695689)
[»] chr6 (26 HSPs)
chr6 (223-409)||(8364602-8364788)
chr6 (223-337)||(34555-34670)
chr6 (223-383)||(31818602-31818763)
chr6 (223-374)||(24665891-24666043)
chr6 (170-331)||(5095957-5096114)
chr6 (232-374)||(9593767-9593908)
chr6 (262-352)||(10617323-10617414)
chr6 (170-331)||(12890698-12890855)
chr6 (223-379)||(33997594-33997749)
chr6 (232-361)||(35199682-35199811)
chr6 (223-262)||(7513040-7513079)
chr6 (228-308)||(1748000-1748081)
chr6 (223-299)||(14389211-14389288)
chr6 (235-314)||(31831920-31832001)
chr6 (223-326)||(6055821-6055925)
chr6 (381-425)||(9593930-9593974)
chr6 (233-280)||(33080321-33080368)
chr6 (170-379)||(579493-579698)
chr6 (285-379)||(4948417-4948511)
chr6 (285-379)||(4955388-4955482)
chr6 (223-303)||(43102-43183)
chr6 (223-280)||(3210558-3210615)
chr6 (261-385)||(6906916-6907040)
chr6 (223-280)||(9568874-9568931)
chr6 (234-337)||(547111-547215)
chr6 (230-321)||(25493907-25493999)
[»] chr7 (61 HSPs)
chr7 (223-379)||(28627983-28628140)
chr7 (239-355)||(24549754-24549871)
chr7 (223-379)||(38135263-38135419)
chr7 (223-314)||(1569156-1569248)
chr7 (223-322)||(21517430-21517530)
chr7 (223-333)||(45601597-45601708)
chr7 (170-331)||(40979930-40980087)
chr7 (170-286)||(36101779-36101890)
chr7 (223-409)||(47796202-47796388)
chr7 (232-321)||(37976368-37976458)
chr7 (232-374)||(47848754-47848896)
chr7 (223-314)||(36239846-36239938)
chr7 (223-337)||(44401177-44401290)
chr7 (231-320)||(28858179-28858269)
chr7 (170-274)||(5418247-5418354)
chr7 (223-321)||(9210754-9210853)
chr7 (232-326)||(12966144-12966239)
chr7 (236-297)||(28542007-28542069)
chr7 (223-277)||(30814175-30814229)
chr7 (223-300)||(35922407-35922485)
chr7 (233-326)||(36136892-36136986)
chr7 (223-304)||(40391873-40391955)
chr7 (223-280)||(34341445-34341502)
chr7 (223-275)||(2882786-2882838)
chr7 (232-280)||(5577546-5577594)
chr7 (170-297)||(27893565-27893688)
chr7 (381-425)||(40169663-40169707)
chr7 (381-425)||(47848688-47848732)
chr7 (283-338)||(14593876-14593931)
chr7 (232-337)||(22174117-22174223)
chr7 (223-337)||(26741944-26742061)
chr7 (381-423)||(42187486-42187528)
chr7 (223-307)||(14057625-14057710)
chr7 (223-307)||(14367653-14367738)
chr7 (233-371)||(28359340-28359476)
chr7 (170-305)||(42187590-42187721)
chr7 (223-303)||(43281982-43282062)
chr7 (238-314)||(43282549-43282626)
chr7 (243-338)||(32368407-32368503)
chr7 (223-258)||(1758441-1758476)
chr7 (283-338)||(16013399-16013454)
chr7 (225-307)||(30664715-30664798)
chr7 (381-412)||(35713722-35713753)
chr7 (264-338)||(40830318-40830393)
chr7 (228-338)||(42177073-42177184)
chr7 (170-331)||(1011170-1011326)
chr7 (220-266)||(30997630-30997676)
chr7 (232-286)||(33732003-33732057)
chr7 (223-321)||(35713831-35713927)
chr7 (381-452)||(38920785-38920852)
chr7 (170-331)||(43491431-43491588)
chr7 (223-260)||(26332923-26332960)
chr7 (273-337)||(30814771-30814836)
chr7 (223-268)||(34926572-34926617)
chr7 (223-303)||(40138998-40139079)
chr7 (381-425)||(7189450-7189494)
chr7 (233-331)||(28562425-28562525)
chr7 (381-425)||(28628157-28628201)
chr7 (381-421)||(38135436-38135476)
chr7 (170-250)||(44951360-44951435)
chr7 (223-255)||(48515371-48515403)
[»] chr2 (61 HSPs)
chr2 (235-384)||(26784402-26784552)
chr2 (235-379)||(19235046-19235191)
chr2 (230-326)||(33287549-33287646)
chr2 (223-372)||(38435034-38435184)
chr2 (223-361)||(33504316-33504456)
chr2 (232-379)||(37470192-37470340)
chr2 (223-299)||(19336943-19337020)
chr2 (223-306)||(9496014-9496098)
chr2 (223-305)||(42149710-42149793)
chr2 (270-379)||(23714361-23714468)
chr2 (270-379)||(24102033-24102140)
chr2 (261-385)||(43832167-43832292)
chr2 (168-334)||(26670888-26671050)
chr2 (245-379)||(38860253-38860388)
chr2 (223-328)||(13149458-13149564)
chr2 (223-308)||(23915743-23915829)
chr2 (232-372)||(12141626-12141767)
chr2 (234-321)||(9556430-9556518)
chr2 (223-374)||(18958991-18959143)
chr2 (231-321)||(37452284-37452375)
chr2 (232-374)||(37481676-37481819)
chr2 (170-331)||(45543075-45543231)
chr2 (223-299)||(33625248-33625325)
chr2 (223-379)||(43751997-43752154)
chr2 (223-378)||(26850311-26850466)
chr2 (170-314)||(35755247-35755391)
chr2 (223-286)||(6219134-6219197)
chr2 (170-308)||(12734846-12734980)
chr2 (223-308)||(7134853-7134939)
chr2 (262-379)||(42543310-42543428)
chr2 (170-379)||(44437723-44437928)
chr2 (170-302)||(8197543-8197671)
chr2 (170-302)||(8202303-8202431)
chr2 (230-314)||(21834694-21834779)
chr2 (223-331)||(31959644-31959753)
chr2 (381-425)||(6218981-6219025)
chr2 (223-306)||(12882095-12882179)
chr2 (233-303)||(2377204-2377275)
chr2 (170-281)||(13474216-13474322)
chr2 (387-447)||(18958903-18958959)
chr2 (223-286)||(36650611-36650674)
chr2 (261-379)||(42092592-42092711)
chr2 (384-447)||(12141540-12141599)
chr2 (381-423)||(13240969-13241011)
chr2 (261-314)||(19024318-19024372)
chr2 (232-297)||(31254445-31254511)
chr2 (232-286)||(32402669-32402723)
chr2 (383-425)||(38860187-38860229)
chr2 (223-297)||(45077884-45077961)
chr2 (235-307)||(1626342-1626415)
chr2 (223-268)||(3720465-3720510)
chr2 (262-366)||(5759084-5759189)
chr2 (251-303)||(12443135-12443188)
chr2 (235-319)||(18188887-18188972)
chr2 (223-331)||(18424427-18424536)
chr2 (227-311)||(9578768-9578852)
chr2 (383-456)||(11412708-11412777)
chr2 (252-379)||(12026084-12026212)
chr2 (170-210)||(28960213-28960253)
chr2 (223-275)||(36366816-36366868)
chr2 (218-313)||(41545546-41545642)
[»] chr1 (78 HSPs)
chr1 (232-372)||(3818915-3819056)
chr1 (232-373)||(50806750-50806890)
chr1 (232-379)||(40416446-40416594)
chr1 (170-326)||(41560357-41560509)
chr1 (170-337)||(8796326-8796489)
chr1 (234-379)||(42501183-42501329)
chr1 (223-369)||(6025690-6025837)
chr1 (228-338)||(8342936-8343047)
chr1 (262-379)||(50771645-50771763)
chr1 (170-331)||(52561591-52561748)
chr1 (212-331)||(478801-478920)
chr1 (222-337)||(29577192-29577307)
chr1 (232-367)||(38868969-38869105)
chr1 (227-321)||(11941634-11941729)
chr1 (232-314)||(29128923-29129006)
chr1 (223-308)||(27520257-27520343)
chr1 (223-372)||(32404576-32404726)
chr1 (223-296)||(43375648-43375722)
chr1 (223-304)||(52532666-52532748)
chr1 (218-314)||(7762482-7762579)
chr1 (220-304)||(51812659-51812744)
chr1 (233-308)||(990518-990594)
chr1 (223-372)||(2544681-2544825)
chr1 (248-379)||(43423794-43423926)
chr1 (170-281)||(34444530-34444636)
chr1 (233-379)||(10569131-10569274)
chr1 (223-308)||(16142030-16142116)
chr1 (230-379)||(33560915-33561065)
chr1 (165-447)||(37462873-37463159)
chr1 (223-280)||(6084150-6084207)
chr1 (223-331)||(9599444-9599553)
chr1 (233-337)||(15577535-15577640)
chr1 (223-331)||(39318252-39318361)
chr1 (228-280)||(13827635-13827687)
chr1 (283-379)||(43898304-43898400)
chr1 (381-425)||(48431630-48431674)
chr1 (223-286)||(5338882-5338945)
chr1 (232-326)||(8203193-8203288)
chr1 (223-337)||(36339854-36339968)
chr1 (223-278)||(39776945-39777000)
chr1 (262-379)||(12261802-12261920)
chr1 (381-423)||(14226053-14226095)
chr1 (262-379)||(28528430-28528548)
chr1 (232-317)||(39515927-39516013)
chr1 (170-279)||(25715328-25715432)
chr1 (261-369)||(30834065-30834174)
chr1 (241-352)||(7921940-7922050)
chr1 (224-331)||(9509441-9509549)
chr1 (223-314)||(11331254-11331346)
chr1 (223-314)||(11489275-11489367)
chr1 (262-321)||(19969301-19969361)
chr1 (262-370)||(37263415-37263523)
chr1 (286-338)||(51584860-51584912)
chr1 (261-379)||(853873-853992)
chr1 (226-312)||(1661561-1661648)
chr1 (223-305)||(12930361-12930444)
chr1 (223-331)||(18469132-18469241)
chr1 (223-286)||(27072537-27072600)
chr1 (170-265)||(28090696-28090786)
chr1 (223-278)||(28511851-28511906)
chr1 (170-308)||(38807673-38807807)
chr1 (170-280)||(4707223-4707327)
chr1 (261-338)||(12231481-12231559)
chr1 (223-300)||(39140669-39140747)
chr1 (232-286)||(40920588-40920642)
chr1 (292-374)||(52160356-52160438)
chr1 (223-285)||(52900692-52900754)
chr1 (250-306)||(8676942-8676999)
chr1 (223-307)||(10200356-10200441)
chr1 (284-373)||(10272339-10272428)
chr1 (230-314)||(16272878-16272963)
chr1 (223-280)||(19908085-19908142)
chr1 (284-361)||(52442640-52442717)
chr1 (236-331)||(8628153-8628249)
chr1 (239-287)||(15438859-15438907)
chr1 (223-255)||(19822088-19822120)
chr1 (219-255)||(39896763-39896799)
chr1 (381-425)||(44905556-44905600)
[»] chr3 (58 HSPs)
chr3 (224-321)||(40116519-40116617)
chr3 (223-331)||(39600731-39600840)
chr3 (233-308)||(45289151-45289227)
chr3 (234-374)||(38430928-38431069)
chr3 (223-297)||(36304123-36304198)
chr3 (223-285)||(40116388-40116450)
chr3 (223-304)||(49841766-49841848)
chr3 (223-379)||(42026586-42026743)
chr3 (223-337)||(29475805-29475918)
chr3 (170-274)||(40106622-40106721)
chr3 (223-425)||(42510066-42510282)
chr3 (223-377)||(23534620-23534775)
chr3 (223-308)||(49042082-49042169)
chr3 (170-331)||(54128501-54128659)
chr3 (223-321)||(54365025-54365124)
chr3 (170-280)||(30797824-30797929)
chr3 (170-331)||(48508358-48508515)
chr3 (223-379)||(37598220-37598376)
chr3 (236-320)||(43308696-43308781)
chr3 (223-294)||(29601052-29601124)
chr3 (232-331)||(30294180-30294280)
chr3 (384-447)||(45289318-45289379)
chr3 (233-326)||(11284121-11284210)
chr3 (237-331)||(19162652-19162746)
chr3 (220-326)||(48953466-48953575)
chr3 (223-273)||(39208790-39208840)
chr3 (285-378)||(11581520-11581613)
chr3 (223-280)||(32170580-32170637)
chr3 (381-447)||(50960857-50960919)
chr3 (232-280)||(19758062-19758110)
chr3 (263-314)||(36820067-36820119)
chr3 (270-373)||(37351488-37351592)
chr3 (381-425)||(49503778-49503822)
chr3 (223-255)||(51027758-51027790)
chr3 (381-425)||(54128392-54128436)
chr3 (232-280)||(55244453-55244501)
chr3 (223-321)||(19676131-19676230)
chr3 (285-384)||(31261055-31261153)
chr3 (381-424)||(46431897-46431940)
chr3 (223-321)||(50960687-50960786)
chr3 (381-443)||(33272246-33272308)
chr3 (223-367)||(33755394-33755537)
chr3 (381-423)||(39235154-39235196)
chr3 (223-277)||(40991609-40991663)
chr3 (261-314)||(46431767-46431821)
chr3 (270-338)||(2340814-2340883)
chr3 (232-308)||(39235284-39235361)
chr3 (223-303)||(41842573-41842654)
chr3 (239-280)||(44571602-44571643)
chr3 (170-223)||(49503570-49503623)
chr3 (223-255)||(2195273-2195305)
chr3 (232-280)||(19737159-19737207)
chr3 (381-425)||(21200562-21200606)
chr3 (381-425)||(26490329-26490373)
chr3 (381-425)||(37534430-37534474)
chr3 (261-320)||(41452828-41452888)
chr3 (381-409)||(48734359-48734387)
chr3 (218-274)||(55384063-55384119)
[»] chr4 (83 HSPs)
chr4 (232-379)||(47147448-47147594)
chr4 (223-331)||(51421853-51421962)
chr4 (170-321)||(45204842-45204988)
chr4 (170-332)||(2557673-2557832)
chr4 (236-404)||(21945701-21945872)
chr4 (170-286)||(55007915-55008026)
chr4 (170-296)||(25574982-25575104)
chr4 (220-314)||(56439618-56439713)
chr4 (223-308)||(26024900-26024986)
chr4 (223-319)||(37488226-37488323)
chr4 (263-374)||(26356699-26356811)
chr4 (232-379)||(42639079-42639227)
chr4 (232-337)||(13805324-13805430)
chr4 (232-321)||(21107125-21107215)
chr4 (232-301)||(30621260-30621330)
chr4 (223-305)||(40420264-40420345)
chr4 (223-336)||(49987526-49987640)
chr4 (223-331)||(35690394-35690503)
chr4 (223-306)||(44384979-44385062)
chr4 (170-304)||(26037507-26037637)
chr4 (232-374)||(28351639-28351782)
chr4 (235-385)||(34233086-34233237)
chr4 (225-319)||(50680875-50680970)
chr4 (223-337)||(53540407-53540522)
chr4 (225-314)||(50662528-50662618)
chr4 (223-314)||(33225885-33225975)
chr4 (223-280)||(34208319-34208376)
chr4 (223-331)||(39708556-39708665)
chr4 (223-331)||(53518373-53518482)
chr4 (237-308)||(31043218-31043290)
chr4 (228-280)||(31339699-31339751)
chr4 (234-361)||(40018250-40018378)
chr4 (233-371)||(7681970-7682109)
chr4 (232-306)||(37042723-37042798)
chr4 (262-319)||(10209171-10209229)
chr4 (271-372)||(25967359-25967461)
chr4 (223-296)||(27049227-27049301)
chr4 (223-280)||(5306471-5306528)
chr4 (220-308)||(16003072-16003161)
chr4 (285-338)||(18966721-18966774)
chr4 (232-308)||(31403093-31403170)
chr4 (226-279)||(34379579-34379632)
chr4 (232-308)||(47372797-47372874)
chr4 (170-294)||(55388213-55388333)
chr4 (232-335)||(934490-934593)
chr4 (232-379)||(2589147-2589295)
chr4 (232-307)||(6843762-6843838)
chr4 (261-308)||(20047581-20047629)
chr4 (228-315)||(21214641-21214729)
chr4 (381-425)||(31459044-31459088)
chr4 (381-425)||(38570971-38571015)
chr4 (224-338)||(45184184-45184297)
chr4 (381-425)||(47611741-47611785)
chr4 (381-425)||(49987442-49987486)
chr4 (242-300)||(26024988-26025047)
chr4 (234-308)||(42293326-42293401)
chr4 (244-378)||(54470283-54470418)
chr4 (220-337)||(55768546-55768665)
chr4 (220-337)||(55832802-55832921)
chr4 (170-331)||(8286562-8286719)
chr4 (262-379)||(31897517-31897635)
chr4 (262-379)||(31961355-31961473)
chr4 (232-286)||(41192230-41192284)
chr4 (170-267)||(1095633-1095725)
chr4 (223-268)||(20601702-20601747)
chr4 (232-285)||(26510558-26510611)
chr4 (223-268)||(29398991-29399036)
chr4 (261-341)||(45569097-45569178)
chr4 (235-319)||(47612528-47612613)
chr4 (285-338)||(48033201-48033254)
chr4 (223-308)||(50967078-50967163)
chr4 (223-251)||(3979124-3979152)
chr4 (252-303)||(7544602-7544654)
chr4 (285-321)||(8599054-8599090)
chr4 (220-327)||(12494790-12494898)
chr4 (220-268)||(22873646-22873694)
chr4 (381-425)||(28236197-28236241)
chr4 (381-425)||(28497504-28497547)
chr4 (381-409)||(35690322-35690350)
chr4 (381-425)||(37773675-37773719)
chr4 (285-325)||(38903831-38903870)
chr4 (262-337)||(46372141-46372217)
chr4 (381-425)||(51252685-51252729)
[»] scaffold0018 (2 HSPs)
scaffold0018 (262-320)||(178509-178568)
scaffold0018 (381-447)||(44092-44154)
[»] scaffold0010 (1 HSPs)
scaffold0010 (223-313)||(160374-160465)
[»] scaffold0373 (1 HSPs)
scaffold0373 (232-307)||(2360-2436)
[»] scaffold0015 (1 HSPs)
scaffold0015 (223-321)||(66670-66770)
[»] scaffold0325 (1 HSPs)
scaffold0325 (270-338)||(11913-11982)
[»] scaffold0025 (1 HSPs)
scaffold0025 (220-273)||(39501-39554)
[»] scaffold0157 (1 HSPs)
scaffold0157 (220-327)||(25579-25687)
[»] scaffold0050 (1 HSPs)
scaffold0050 (223-255)||(58276-58308)


Alignment Details
Target: chr5 (Bit Score: 397; Significance: 0; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 397; E-Value: 0
Query Start/End: Original strand, 19 - 477
Target Start/End: Original strand, 38341275 - 38341733
Alignment:
Q  19 atcaaaatcatataaatcttaaccaggaatgaattcataaaaattgaaaaggtggacaaaaaggtaaacccaaaataacattaatcaattatttaattcc 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  38341275 atcaaaatcatataaatcttaaccaggaatgaattcataaaaattgaaaagggggacaaaaaggtaaacccaaaataacattaatcaattatttaattcc 38341374  T
Q  119 aaataatctaataacaaaagtaatttaacacaaaaaagaattcaagaaacaaacaacaaccaacccttatcccactaaatagtgtcgactacgtagatca 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  38341375 aaataatctaataacaaaagtaatttaacacaaaaaagaattcaagaaacaaacaacaaccaacccttatcccactaaatagcgtcgactacgtagatca 38341474  T
Q  219 aattaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagtttctcttatagttcttctaagtc 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38341475 aattaaattacgtcataatgttctatcataaaccatacttcgatccaa---attaatctctatatcttcttaatagtttctcttatagttcttctaagtc 38341571  T
Q  319 ttcatctaactctagtgattcgattgccctccatctggtctaccctccttactacataa-------tcaacatgcccaaaccacctaagcctattttcca 411  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||| ||||||||||||||||||||||||||    
T  38341572 ttcatctaactctagtgattcgattgccctccatctggtctaccctccttactacataatcaacattcaacatacccaaaccacctaagcctattttcca 38341671  T
Q  412 ctgtcttttctactgtctatagctgctaccccaacttcctctctagtctctaatgtcatttctaaa 477  Q
    ||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38341672 ctgtcttttcta----ctatagctgctaccccaacttcctctctagtctctaatgtcatttctaaa 38341733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 232 - 425
Target Start/End: Original strand, 12576919 - 12577116
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactc 330  Q
    ||||||| ||||||||| |||||| ||| || ||||| ||||||||||| ||||| ||||||||||| |||| ||||| ||||| |||||| |||  |||    
T  12576919 cataatggtctatcatataccatatttctattcaactcattaatctctagatctttcttaatagtttatcttgtagtttttctaggtcttcctctgcctc 12577018  T
Q  331 tagtgattcgattgccctccatctggtctaccctccttactacat-aatcaacatg--cccaaaccacctaagcctattttccactgtcttttctact 425  Q
    |||||||  || | ||||||||||| ||||| ||||||||||| |  ||| |||||  |||||||||| |||| ||| |||||||  |||||||||||    
T  12577019 tagtgataggactaccctccatctgatctactctccttactacttctatctacatgcccccaaaccacataagtctagtttccaccatcttttctact 12577116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 223 - 337
Target Start/End: Complemental strand, 9235279 - 9235166
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||| | |||||||||||||||||||||||| ||||||||| || ||||||||||||||| |||||||||||||||||  ||||| ||||| ||||||    
T  9235279 aaattatgccataatgttctatcataaaccatatttcgatccagctcattaatctctatatctttcttaatagtttctct--tagtttttctaggtcttc 9235182  T
Q  322 atctaactctagtgat 337  Q
     |||  ||||||||||    
T  9235181 ctctgcctctagtgat 9235166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 223 - 384
Target Start/End: Original strand, 7359311 - 7359472
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctata-tcttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||||||||||||| |||| ||||||||| |||||||||||| ||||||||||| | | |||| ||||||||||||||| ||| ||||| |  |||    
T  7359311 aaattacgtcataatgtt-tatcgtaaaccatatttcgatccaacttattaatctctagatttttctaaatagtttctcttatggtttttctaggctttc 7359409  T
Q  322 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatcaacat 384  Q
     |||  ||||||||||  || |  |||||||||| ||||| |||||||||||| |||| ||||    
T  7359410 ctctgcctctagtgatatgactatcctccatctgatctactctccttactacagaatctacat 7359472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 223 - 379
Target Start/End: Complemental strand, 14749539 - 14749382
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||| ||| |||| |||||||||| |||||||| ||| ||||||||  |||||||||| ||| ||||| |||||||||||||||||| ||||| ||||||    
T  14749539 aaatgacgccatagtgttctatcaaaaaccatatttctatccaactcgttaatctctagatccttcttgatagtttctcttatagtttttctaggtcttc 14749440  T
Q  322 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 379  Q
     |||  || |||||||| || | ||||||||||| || || |||||||| ||| ||||    
T  14749439 ctctgcctttagtgatttgactcccctccatctgatcgactctccttacaacagaatc 14749382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 223 - 314
Target Start/End: Complemental strand, 14668003 - 14667911
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttcta 314  Q
    |||||||  ||||||||||||||||||||||||||| ||||||||| ||||||||||| ||| |||||| ||| ||||||||||||| |||||    
T  14668003 aaattacaccataatgttctatcataaaccatacttggatccaactcattaatctctagatctttcttagtagcttctcttatagtttttcta 14667911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 220 - 314
Target Start/End: Complemental strand, 6889228 - 6889133
Alignment:
Q  220 attaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttcta 314  Q
    ||||||||||| |||||||||||||||||||||||| || |  |||||| ||||||||||| ||| ||| |||||||||||||||||||| |||||    
T  6889228 attaaattacgccataatgttctatcataaaccatattttggcccaactaattaatctctaaatctttcctaatagtttctcttatagtttttcta 6889133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 228 - 321
Target Start/End: Complemental strand, 30588674 - 30588580
Alignment:
Q  228 acgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    ||||||||||||||||| |||||||||| |||||||||||| ||| ||||||| ||| ||||||| | |||||||||||||| ||||| ||||||    
T  30588674 acgtcataatgttctattataaaccatatttcgatccaactcattcatctctagatctttcttaacaatttctcttatagtttttctaggtcttc 30588580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 223 - 385
Target Start/End: Complemental strand, 32516787 - 32516625
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttct-taatagtttctcttatagttcttctaagtcttc 321  Q
    ||||||||||||||| ||||||||||||||||| ||  ||||||||  |||||||||| |||| || |||||||||||||||||||| || || ||||||    
T  32516787 aaattacgtcataatattctatcataaaccatatttgaatccaacttgttaatctctaaatctgctctaatagtttctcttatagtt-ttttaggtcttc 32516689  T
Q  322 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatcaacatg 385  Q
     |||| |||| || ||  ||||  ||| |||| | ||||| |||| ||||||| |||| |||||    
T  32516688 ctctacctcttgtaatctgattatccttcatccgatctactctccatactacagaatctacatg 32516625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 230 - 319
Target Start/End: Complemental strand, 23980169 - 23980079
Alignment:
Q  230 gtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtct 319  Q
    |||||| ||||||||||||||||||| || ||||||||| |||||||| || ||| |||| ||||||||||||||| ||||||||| ||||    
T  23980169 gtcatattgttctatcataaaccatatttagatccaactcattaatctataaatcattctcaatagtttctcttattgttcttctaggtct 23980079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 372
Target Start/End: Complemental strand, 38684712 - 38684562
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||| ||| |||||||||||||||   |||||| ||| |||||||| ||||||||||| ||| ||||||| |||||||||| ||||| ||||| ||||||    
T  38684712 aaataacgccataatgttctatcaagtaccatatttctatccaactaattaatctctagatctttcttaaaagtttctcttgtagtttttctaggtcttc 38684613  T
Q  322 atctaactctagtgattcgattgccctccatctggtctaccctccttacta 372  Q
     | ||  |||||||||| || | ||||||||||  | ||| ||||||||||    
T  38684612 ctttacatctagtgattggaatcccctccatctaatatactctccttacta 38684562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 219 - 326
Target Start/End: Original strand, 15252790 - 15252894
Alignment:
Q  219 aattaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagtttctcttatagttcttctaagtc 318  Q
    ||||||| ||| |||||||||||||||||||||| || ||||||||||||  ||||||| |||   |||| | |||||||| |||||||||||| |||||    
T  15252790 aattaaactacatcataatgttctatcataaaccctatttcgatccaactcgttaatctatat---ttctcattagtttcttttatagttcttcgaagtc 15252886  T
Q  319 ttcatcta 326  Q
    ||| ||||    
T  15252887 ttcctcta 15252894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 170 - 278
Target Start/End: Original strand, 43557835 - 43557938
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||  |||||||||||||| | | |||| |||| |||||||| ||||     |||||||||||||||||||||||||| ||||||||||||     
T  43557835 aacaacaaccaggccttatcccactaagtggggtcggctacatagatcaacttaa-----gtcataatgttctatcataaaccatatttcgatccaactc 43557929  T
Q  270 attaatctc 278  Q
    | |||||||    
T  43557930 aataatctc 43557938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 262 - 368
Target Start/End: Complemental strand, 2713137 - 2713030
Alignment:
Q  262 tccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtcta 360  Q
    ||||||| ||| ||||||| ||| |||||||||||||||||||||||| ||||| ||||||  || |||||||||||| || |  |||||||||| ||||    
T  2713137 tccaactcattcatctctagatccttcttaatagtttctcttatagtttttctaggtcttcccctgactctagtgatttgactctcctccatctgatcta 2713038  T
Q  361 ccctcctt 368  Q
    | ||||||    
T  2713037 ctctcctt 2713030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 220 - 308
Target Start/End: Complemental strand, 11675765 - 11675675
Alignment:
Q  220 attaaattacgtcataatgttctatcataaaccatactt-cgatccaactgattaatctctatatct-tcttaatagtttctcttatagtt 308  Q
    |||||| |||| |||||||||||||||||||||||| ||   |||||||| ||||||||||| |||| || ||||||||||||||||||||    
T  11675765 attaaactacgccataatgttctatcataaaccatatttaaaatccaactcattaatctctaaatctgtcctaatagtttctcttatagtt 11675675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 223 - 314
Target Start/End: Complemental strand, 29922516 - 29922424
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttcta 314  Q
    |||||||| |||||||||||||| |||||||   |||  |||||||  |||||||||| ||||| |||||||||||||||||||||| |||||    
T  29922516 aaattacgccataatgttctatcgtaaaccaggtttcagtccaacttgttaatctctaaatctttcttaatagtttctcttatagtttttcta 29922424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 321
Target Start/End: Complemental strand, 28114 - 28015
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||| | |||| |||||||||| ||| |||| || ||||||||| ||||| ||||| ||||| | |||||||||||||||||||| ||||| ||||||    
T  28114 aaattatgccatagtgttctatcagaaatcatatttggatccaacttattaacctctaaatctttcctaatagtttctcttatagtttttctaggtcttc 28015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 286
Target Start/End: Original strand, 418084 - 418147
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt 286  Q
    |||||||| |||||||||||||||||||||| | || ||||||||| ||||||||||| |||||    
T  418084 aaattacgccataatgttctatcataaaccacatttggatccaactcattaatctctaaatctt 418147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 233 - 326
Target Start/End: Original strand, 17340496 - 17340590
Alignment:
Q  233 ataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatcta 326  Q
    |||||||| |||||||||||||| || |||| |||| ||||| ||||| ||| |||||||||||| |  ||||| || |||||||||||||||||    
T  17340496 ataatgttatatcataaaccatatttggatcaaactcattaacctctaaatctttcttaatagttacaattataatttttctaagtcttcatcta 17340590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 170 - 303
Target Start/End: Complemental strand, 43475519 - 43475390
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| |||||||||| ||| | | || | |||||| |||||||||| |      ||||| |||||| |||||| |||| ||||||||||||     
T  43475519 aacaacaaccaagccttatcccattaagtggagttggctacgtggatcaaattacac-----cataacgttctaccataaatcatatttcgatccaactc 43475425  T
Q  270 attaatctctatatc-ttcttaatagtttctctta 303  Q
    ||||||||||  ||| |||||||||||||||||||    
T  43475424 attaatctctggatctttcttaatagtttctctta 43475390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 335
Target Start/End: Complemental strand, 6859613 - 6859500
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||| | |||||||||||||||||||||||| || |  |||| | | |||||| || ||||| | |||||||||||||||||||| ||||| ||||||    
T  6859613 aaattatgccataatgttctatcataaaccatattttggcccaagtaactaatctgtaaatctttcctaatagtttctcttatagtttttctaggtcttc 6859514  T
Q  322 atctaactctagtg 335  Q
     |||  ||||||||    
T  6859513 ctcttcctctagtg 6859500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 385
Target Start/End: Original strand, 9917538 - 9917663
Alignment:
Q  261 atccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtct 359  Q
    |||||||| ||| ||||||||||||| || |||||||||||| |||||| ||||| ||| || |||  |||| |||||| || |  |||||||||| ||     
T  9917538 atccaactcattgatctctatatctttctaaatagtttctctaatagtttttctaggtcatcctctgtctcttgtgatttgactatcctccatctgatcg 9917637  T
Q  360 accctccttactacataatcaacatg 385  Q
    || ||| |||||||| ||||||||||    
T  9917638 actctctttactacaaaatcaacatg 9917663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 280
Target Start/End: Complemental strand, 20367125 - 20367068
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctcta 280  Q
    |||||||||||||||||| | |||||||||||| || ||||||||| |||||||||||    
T  20367125 aaattacgtcataatgttatgtcataaaccatatttggatccaactcattaatctcta 20367068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 262 - 374
Target Start/End: Original strand, 31636009 - 31636122
Alignment:
Q  262 tccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtcta 360  Q
    ||||||| ||| ||||||||||| ||||| ||||||||||| |||||| |||||  |||||  ||| ||||||||||| || | ||| ||||||  ||||    
T  31636009 tccaactcattgatctctatatccttcttgatagtttctctaatagtttttctagatcttcccctatctctagtgatttgactccccaccatctaatcta 31636108  T
Q  361 ccctccttactaca 374  Q
    | ||||||||||||    
T  31636109 ctctccttactaca 31636122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 5305857 - 5305756
Alignment:
Q  234 taatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagtttctcttatagttcttctaagtcttcatctaactctag 333  Q
    ||||||||||||||||||| || || ||||||||| ||||||| |  ||| ||| | |||||||||| ||||||| ||||| |||||| |||  ||||||    
T  5305857 taatgttctatcataaaccttatttggatccaactcattaatcac--tattttcatgatagtttctcatatagtttttctaggtcttcctctgcctctag 5305760  T
Q  334 tgat 337  Q
    ||||    
T  5305759 tgat 5305756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 337
Target Start/End: Complemental strand, 7678701 - 7678595
Alignment:
Q  231 tcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaact 329  Q
    |||||||||| ||| ||||||| || |||||||||||| ||||||||||| ||| |||| ||||||||||||||| ||| | |||  ||||| |||  ||    
T  7678701 tcataatgtt-tattataaaccgtatttcgatccaactcattaatctctagatctttctaaatagtttctcttatggttttactagatcttcctctgcct 7678603  T
Q  330 ctagtgat 337  Q
    ||||||||    
T  7678602 ctagtgat 7678595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 215 - 286
Target Start/End: Complemental strand, 36200969 - 36200898
Alignment:
Q  215 atcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt 286  Q
    ||||||| |||||||||||||| |||  ||||| ||||||| || ||||||||| ||||| |||||||||||    
T  36200969 atcaaatgaaattacgtcataaagtttgatcatgaaccatatttggatccaactcattaacctctatatctt 36200898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 285 - 379
Target Start/End: Original strand, 15489605 - 15489699
Alignment:
Q  285 ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 379  Q
    |||||||||||||||||||| ||| ||||| |||||| |||  |||||||||||| | |  |||||||||  ||||| ||||||| |||| ||||    
T  15489605 ttcttaatagtttctcttattgtttttctaggtcttcctctgcctctagtgattcaactatcctccatctaatctactctccttaatacaaaatc 15489699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 326
Target Start/End: Complemental strand, 1275496 - 1275392
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||| ||||||||||||||||||| | |||| | || ||| ||||||||||| ||||| || |||  |||| |||||||| |||||| ||||| ||||||    
T  1275496 aaatgacgtcataatgttctatcaaacaccaaatttggattcaactgattaacctctaaatcctttataatggtttctctaatagtttttctaggtcttc 1275397  T
Q  322 atcta 326  Q
     ||||    
T  1275396 ctcta 1275392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 170 - 254
Target Start/End: Complemental strand, 5860114 - 5860035
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccat 254  Q
    |||||||| ||| |||||||||||||| ||| |||| |||| ||||||||||||     || ||||||| |||||||||||||||    
T  5860114 aacaacaatcaagccttatcccactaagtagggtcggctacatagatcaaatta-----cgccataatggtctatcataaaccat 5860035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 372
Target Start/End: Complemental strand, 21952540 - 21952439
Alignment:
Q  270 attaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctcctt 368  Q
    ||||||||||| ||| |||| |||||||||||  |||||| ||||| ||||||  ||| ||||||||||| || | ||||||||||| ||||  ||||||    
T  21952540 attaatctctagatccttctcaatagtttctc--atagtttttctaggtcttcccctacctctagtgatttgactcccctccatctgatctattctcctt 21952443  T
Q  369 acta 372  Q
    ||||    
T  21952442 acta 21952439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 255
Target Start/End: Original strand, 42504297 - 42504329
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccata 255  Q
    |||||||||||||||||||||||||||||||||    
T  42504297 aaattacgtcataatgttctatcataaaccata 42504329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 338
Target Start/End: Complemental strand, 2066220 - 2066113
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactc 330  Q
    |||||| ||||||| ||||| ||| ||  |||||||| ||||||||||| ||| || ||| |||||||| ||||| || ||||| ||||||||  | |||    
T  2066220 cataattttctatcgtaaactataattttatccaactcattaatctctagatcttttttagtagtttcttttataatttttctaggtcttcatgcatctc 2066121  T
Q  331 tagtgatt 338  Q
    ||||||||    
T  2066120 tagtgatt 2066113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 27998668 - 27998569
Alignment:
Q  228 acgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatcta 326  Q
    |||||||||| |||||||||| | |||  | | ||| |||| |||||||| || ||||| |||| ||||||||||||||||| ||||| |||||| ||||    
T  27998668 acgtcataatattctatcatatatcatgttcctatctaactcattaatctgtagatctttcttagtagtttctcttatagtttttctaggtcttcctcta 27998569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 254
Target Start/End: Original strand, 1104754 - 1104788
Alignment:
Q  220 attaaattacgtcataatgttctatcataaaccat 254  Q
    ||||||||||| |||||||||||||||||||||||    
T  1104754 attaaattacgccataatgttctatcataaaccat 1104788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 282
Target Start/End: Original strand, 18350957 - 18351011
Alignment:
Q  228 acgtcataatgttctatcataaaccatacttcgatccaactgattaatctctata 282  Q
    |||||||||||||||| || | |||||| ||| |||||||| |||||||||||||    
T  18350957 acgtcataatgttctaacaaataccatatttctatccaactcattaatctctata 18351011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 277
Target Start/End: Original strand, 21193702 - 21193756
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatct 277  Q
    |||||| ||||||||| |||||||||||||||| ||| ||||||||  |||||||    
T  21193702 aaattatgtcataatgatctatcataaaccatatttctatccaactctttaatct 21193756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 280
Target Start/End: Complemental strand, 35615508 - 35615458
Alignment:
Q  230 gtcataatgttctatcataaaccatacttcgatccaactgattaatctcta 280  Q
    |||||||||||||||||||||| ||| ||  |||||||| |||||||||||    
T  35615508 gtcataatgttctatcataaactatatttttatccaactcattaatctcta 35615458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 341
Target Start/End: Original strand, 36123241 - 36123351
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactc 330  Q
    ||||||||||||||||| | |||||  | |   |||| ||||||||||| ||| ||||| || ||||| ||||||| | |||||||||||| | || |||    
T  36123241 cataatgttctatcatatatcatacccctacataactcattaatctctagatccttcttgatggtttcccttatagcttttctaagtcttcctttacctc 36123340  T
Q  331 tagtgattcga 341  Q
    |||||||||||    
T  36123341 tagtgattcga 36123351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 134
Target Start/End: Original strand, 38341767 - 38341813
Alignment:
Q  88 ccaaaataacattaatcaattatttaattccaaataatctaataaca 134  Q
    |||||||||||| |||||| |||||||||||||| | ||||||||||    
T  38341767 ccaaaataacatgaatcaactatttaattccaaagattctaataaca 38341813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 324
Target Start/End: Original strand, 38501484 - 38501570
Alignment:
Q  239 ttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttcatc 324  Q
    |||||||||||| |||| || ||||||||| ||| | ||||| || |||  ||||||||||| |||||||||| ||| |||||||||    
T  38501484 ttctatcataaatcatatttggatccaacttattgacctctaaatactttctaatagtttcttttatagttctcctaggtcttcatc 38501570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 338
Target Start/End: Original strand, 3775180 - 3775233
Alignment:
Q  285 ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgatt 338  Q
    ||||||||||||| |||||||||| ||||| |||||| |||  |||||||||||    
T  3775180 ttcttaatagtttatcttatagtttttctaggtcttcttctgcctctagtgatt 3775233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 14665992 - 14665939
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaatta 223  Q
    |||||||||||| |||||||||||||| | | |||| |||| ||||||||||||    
T  14665992 aacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaatta 14665939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 425
Target Start/End: Complemental strand, 27249271 - 27249234
Alignment:
Q  388 caaaccacctaagcctattttccactgtcttttctact 425  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  27249271 caaaccacctaagcctaatttccactttcttttctact 27249234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 447
Target Start/End: Complemental strand, 28676653 - 28676591
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctactgtctatagctgctaccccaact 447  Q
    ||||||| |||||||||||| |||||||||||  |||||||||    ||||||||||||||| ||||    
T  28676653 acatgccgaaaccacctaagactattttccaccatcttttcta----ctatagctgctacccgaact 28676591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 338
Target Start/End: Complemental strand, 33667628 - 33667551
Alignment:
Q  262 tccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgatt 338  Q
    ||||||| ||||||||||| ||| |||||||||  ||||||||||||| ||||| ||||||  |||  ||||||||||    
T  33667628 tccaactcattaatctctagatccttcttaataacttctcttatagtttttctaggtcttcccctacatctagtgatt 33667551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 331
Target Start/End: Complemental strand, 38685199 - 38685090
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||| ||| |||| ||||||||||||||||||| || ||||||||| ||| | ||||| || |||  |||| |||||||| |||||| | ||| ||||||    
T  38685199 aaatgacgccatattgttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttc 38685100  T
Q  322 atctaactct 331  Q
     |||| ||||    
T  38685099 ctctacctct 38685090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 285 - 325
Target Start/End: Original strand, 1001295 - 1001335
Alignment:
Q  285 ttcttaatagtttctcttatagttcttctaagtcttcatct 325  Q
    |||||||||||||| ||||||||| ||||| ||||||||||    
T  1001295 ttcttaatagtttcacttatagtttttctaggtcttcatct 1001335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 386 - 447
Target Start/End: Complemental strand, 14667816 - 14667759
Alignment:
Q  386 cccaaaccacctaagcctattttccactgtcttttctactgtctatagctgctaccccaact 447  Q
    ||||||||||||||| |||||||||||  |||||||||    |||||| |||||||||||||    
T  14667816 cccaaaccacctaagtctattttccaccatcttttcta----ctataggtgctaccccaact 14667759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 314
Target Start/End: Complemental strand, 15168987 - 15168911
Alignment:
Q  239 ttctatcataaaccatacttcgatccaactgattaatctctata-tcttcttaatagtttctcttatagttcttcta 314  Q
    |||||||||||||||||  | ||||||||| ||||| ||||| | | ||| ||| |||||||||||||||| |||||    
T  15168987 ttctatcataaaccatatctggatccaacttattaacctctaaatttttcctaacagtttctcttatagtttttcta 15168911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 425
Target Start/End: Complemental strand, 32516606 - 32516570
Alignment:
Q  389 aaaccacctaagcctattttccactgtcttttctact 425  Q
    ||||||||||||||||||||||||  |||||||||||    
T  32516606 aaaccacctaagcctattttccaccatcttttctact 32516570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 425
Target Start/End: Complemental strand, 42199344 - 42199300
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctact 425  Q
    |||||||||||||||||||| ||| |||||||  |||||||||||    
T  42199344 acatgcccaaaccacctaagtctagtttccaccatcttttctact 42199300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 385
Target Start/End: Complemental strand, 42199479 - 42199355
Alignment:
Q  262 tccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtcta 360  Q
    ||||||| |||||| |||| ||||| || |||||||| ||| |||||| ||||| |||||  |||  | ||||||||| || | | |||||| || ||||    
T  42199479 tccaactcattaatatctagatctttctaaatagtttgtctaatagtttttctaggtctttctctccccctagtgatttgactactctccatgtgatcta 42199380  T
Q  361 ccctccttactacataatcaacatg 385  Q
    | |||||||||||| |||| |||||    
T  42199379 ctctccttactacagaatctacatg 42199355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 6e-35; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 223 - 385
Target Start/End: Complemental strand, 30559925 - 30559762
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||||||||||||||||||||||||||||  | ||||||||| ||||||||||| ||| ||| | |||||||||||||||||| || |||||||||    
T  30559925 aaattacgtcataatgttctatcataaaccatatatggatccaactcattaatctctaaatctttcctgatagtttctcttatagtttttttaagtcttc 30559826  T
Q  322 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatcaacatg 385  Q
    ||||| |||||||||| ||| |  |||||||||| || ||  ||||||||||| |||| |||||    
T  30559825 atctatctctagtgatccgactatcctccatctgatccactgtccttactacaaaatctacatg 30559762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 170 - 379
Target Start/End: Complemental strand, 29520929 - 29520725
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| | |||||||||||||| | || | |||| | ||||||||||     || |||||||||||||||||||||||| || |||||||||     
T  29520929 aacaacaaccaagcattatcccactaaatggggtgggctacatggatcaaatta-----cgccataatgttctatcataaaccatatttggatccaactc 29520835  T
Q  270 attaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctcctt 368  Q
    ||||||||||| ||| ||| ||| |||||||||||||||| |||| || |||| |||| |||| |||||| || |  |||||||||| ||||| ||||||    
T  29520834 attaatctctaaatcgttcctaacagtttctcttatagtttttct-aggcttcctctacctcttgtgatttgactatcctccatctgatctactctcctt 29520736  T
Q  369 actacataatc 379  Q
    |||||| ||||    
T  29520735 actacaaaatc 29520725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 170 - 319
Target Start/End: Original strand, 30198268 - 30198413
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| |||||||||||||| | | |||| | || ||||||||| || |      |||||| ||||||||||||||||| | ||||||||||     
T  30198268 aacaacaaccaagccttatcccactaagtggggtcggcaacatagatcaaactacac-----cataatattctatcataaaccatattccgatccaactc 30198362  T
Q  270 attaatctctatatc-ttcttaatagtttctcttatagttcttctaagtct 319  Q
    ||||||||| ||||| ||||||||| |||||||||||||| ||||||||||    
T  30198363 attaatctcaatatctttcttaataatttctcttatagtttttctaagtct 30198413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 334
Target Start/End: Original strand, 35643670 - 35643768
Alignment:
Q  237 tgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagt 334  Q
    ||||||||||||||||||| |||||||||||| ||||||||||| ||| ||||||||| |||||||||||||| ||||| |||||| |||  |||||||    
T  35643670 tgttctatcataaaccatatttcgatccaactcattaatctctagatctttcttaataatttctcttatagtttttctaggtcttcctctgcctctagt 35643768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 223 - 307
Target Start/End: Original strand, 16035777 - 16035862
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagt 307  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||| | ||||||||| ||  ||||||| |||||||||||||||    
T  16035777 aaattacgtcataatgttctaccataaaccatatttcgatccaactaagtaatctctagatatttcttaacagtttctcttatagt 16035862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 233 - 337
Target Start/End: Complemental strand, 2216508 - 2216405
Alignment:
Q  233 ataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagtttctcttatagttcttctaagtcttcatctaactcta 332  Q
    ||||||||||||||||||| ||| |  ||||||||| ||| ||||||| |||||||||||||||||||||||  || ||||| |||||| |||| |||||    
T  2216508 ataatgttctatcataaac-atattaggatccaactcattgatctctaaatcttcttaatagtttctcttatgttttttctaggtcttcctctacctcta 2216410  T
Q  333 gtgat 337  Q
    |||||    
T  2216409 gtgat 2216405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 236 - 379
Target Start/End: Original strand, 10079970 - 10080114
Alignment:
Q  236 atgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagt 334  Q
    ||||||||||| | | |||| ||| |||||||| ||||||||||| ||||| ||||| ||||| ||||||||||  |||| |||||| |||| |||||||    
T  10079970 atgttctatcaaatatcatatttctatccaactcattaatctctagatctttcttaacagtttttcttatagtttctctaggtcttcctctacctctagt 10080069  T
Q  335 gattcgattgccctccatctggtctaccctccttactacataatc 379  Q
    |||| || | |||| ||| || ||||| |||||||||||| ||||    
T  10080070 gatttgactccccttcatttgatctactctccttactacaaaatc 10080114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 235 - 374
Target Start/End: Complemental strand, 16917403 - 16917263
Alignment:
Q  235 aatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctag 333  Q
    |||||||||||||| |||||| ||| |||||||| ||||||||||| ||||| ||| |||||||| | ||||| | ||||| |||||| |||| || |||    
T  16917403 aatgttctatcatataccatatttctatccaactcattaatctctaaatcttccttgatagtttcacctatagcttttctaggtcttcttctacctgtag 16917304  T
Q  334 tgattcgattgccctccatctggtctaccctccttactaca 374  Q
    ||||| || |  |||| ||||| ||||| ||||||||||||    
T  16917303 tgatttgactatcctcaatctgatctactctccttactaca 16917263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 223 - 374
Target Start/End: Original strand, 43904715 - 43904867
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatct-tcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||| |||||||||||||||||||||||| || ||||||||| ||||||||||| |||| || |||  ||||||||||||||  ||||| ||||||    
T  43904715 aaattacgccataatgttctatcataaaccatatttagatccaactcattaatctctaaatctctcataaccgtttctcttatagtatttctaggtcttc 43904814  T
Q  322 atctaactctagtgattcgattgccctccatctggtctaccctccttactaca 374  Q
     | || |||| || ||| || |  |||||||||| ||||  || |||||||||    
T  43904815 ctgtacctcttgtaatttgactatcctccatctgatctattcttcttactaca 43904867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 231 - 317
Target Start/End: Original strand, 24399847 - 24399934
Alignment:
Q  231 tcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagt 317  Q
    ||||||| ||||||||||||||||| ||| |||||||| ||||||||| | || |||||||||||||||||||||| || ||||||||    
T  24399847 tcataatattctatcataaaccatatttcaatccaactcattaatctcgagatccttcttaatagtttctcttataatttttctaagt 24399934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 264 - 375
Target Start/End: Complemental strand, 16351569 - 16351457
Alignment:
Q  264 caactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctacc 362  Q
    ||||| ||||||||||| ||| ||||||||||||||||| |||||| ||||| ||||||  ||| ||| ||||| | || | ||||||||||| |||||     
T  16351569 caactcattaatctctagatccttcttaatagtttctctaatagtttttctaggtcttctcctatctcaagtgacttgactcccctccatctgatctact 16351470  T
Q  363 ctccttactacat 375  Q
    |||||||||||||    
T  16351469 ctccttactacat 16351457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 227 - 321
Target Start/End: Original strand, 17491708 - 17491803
Alignment:
Q  227 tacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||| |||||||||||||||||||||||| || | ||||||| ||||||||| |  || ||||||||||||||||||| |||| ||||| ||||||    
T  17491708 tacgccataatgttctatcataaaccatattttggtccaactcattaatctccaagtctttcttaatagtttctcttacagtttttctaggtcttc 17491803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 223 - 321
Target Start/End: Original strand, 35914651 - 35914750
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||| |||||||||||||||||||||||| || | ||||||| ||||||||  |  || ||| |||||||||||||||||||| ||||| ||||||    
T  35914651 aaattacgccataatgttctatcataaaccatattttggtccaactcattaatcttcaagtctttcctaatagtttctcttatagtttttctatgtcttc 35914750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 288 - 379
Target Start/End: Original strand, 38178376 - 38178467
Alignment:
Q  288 ttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 379  Q
    ||||||||||||||||||||| ||||| |||||| |||| |||||| |||| || |  |||||||||| ||||| |||||||||||| ||||    
T  38178376 ttaatagtttctcttatagtttttctaggtcttcctctacctctagcgatttgactatcctccatctgatctactctccttactacaaaatc 38178467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 223 - 379
Target Start/End: Complemental strand, 32931192 - 32931036
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||| | ||||||||||||||||| |||||| |||| ||||||| |||||| || | ||| ||| ||||||||||||| |||||| || || ||||||    
T  32931192 aaattatgccataatgttctatcatacaccatatttcg-tccaactcattaatttcaaaatctttcctaatagtttctctgatagtttttttaggtcttc 32931094  T
Q  322 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 379  Q
     |||  ||||||||||  || |  |||||||||| ||||  |||||||||||| ||||    
T  32931093 ctctgcctctagtgatatgactatcctccatctgatctagtctccttactacagaatc 32931036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 170 - 286
Target Start/End: Complemental strand, 490615 - 490504
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||| ||| |||||||||||||| | | |||| |||| | ||||||||||     || |||||||||||||||||||||||| || |||||||||     
T  490615 aacaacaaacaagccttatcccactaagtggggtcggctacatggatcaaatta-----cgccataatgttctatcataaaccatatttggatccaactc 490521  T
Q  270 attaatctctatatctt 286  Q
    || |||||||| |||||    
T  490520 atcaatctctaaatctt 490504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 262 - 385
Target Start/End: Original strand, 7531733 - 7531857
Alignment:
Q  262 tccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtcta 360  Q
    ||||||| ||| ||||||| ||| ||| |||||||||||| ||||||| ||||| |||| |   || ||||||||||  || | ||||||||||| ||||    
T  7531733 tccaactcatttatctctagatccttcctaatagtttctcgtatagtttttctaggtctacccttacctctagtgatctgactcccctccatctgatcta 7531832  T
Q  361 ccctccttactacataatcaacatg 385  Q
    | ||||||||||||||||| |||||    
T  7531833 ctctccttactacataatccacatg 7531857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 232 - 331
Target Start/End: Original strand, 9904941 - 9905041
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttc-ttaatagtttctcttatagttcttctaagtcttcatctaactc 330  Q
    ||||||||| ||||||||||| || || ||||||| | |||||| |||| |||||  ||||||||||||||| ||||| ||||| ||||||||||| |||    
T  9904941 cataatgttttatcataaaccttattttgatccaaatcattaatttctaaatctttattaatagtttctcttgtagtttttctaggtcttcatctacctc 9905040  T
Q  331 t 331  Q
    |    
T  9905041 t 9905041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 314
Target Start/End: Original strand, 39967553 - 39967641
Alignment:
Q  227 tacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttcta 314  Q
    |||| |||||||||||| ||||||| |||  || |||||||| ||||||| ||| ||||| |||||||||||||||||||||| |||||    
T  39967553 tacgccataatgttctaacataaactatatctcaatccaactcattaatcgctagatctttcttaatagtttctcttatagtttttcta 39967641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 286
Target Start/End: Complemental strand, 21425278 - 21425215
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt 286  Q
    |||||| | ||||||| ||||||||||| |||| |||||||||||| |||||||||||||||||    
T  21425278 aaattatgccataatggtctatcataaatcatatttcgatccaactcattaatctctatatctt 21425215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 337
Target Start/End: Original strand, 30783100 - 30783207
Alignment:
Q  231 tcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaact 329  Q
    |||||||||| ||| ||||||| || |||||||||||| ||||||||||| ||| |||| ||||||||||||||| ||| | |||  ||||| |||  ||    
T  30783100 tcataatgttttattataaaccgtatttcgatccaactcattaatctctagatctttctaaatagtttctcttatggttttactagatcttcctctgcct 30783199  T
Q  330 ctagtgat 337  Q
    ||||||||    
T  30783200 ctagtgat 30783207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 321
Target Start/End: Original strand, 33827811 - 33827906
Alignment:
Q  227 tacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    ||||||||| ||||||||||||||||||| || ||||||| | |||||||| || ||  || ||||||||||||||||||||| || || ||||||    
T  33827811 tacgtcatattgttctatcataaaccatatttagatccaattcattaatctataaatattttttaatagtttctcttatagtttttatacgtcttc 33827906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 331
Target Start/End: Complemental strand, 13589711 - 13589602
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttct-taatagtttctcttatagttcttctaagtcttc 321  Q
    ||||| || |||| ||||||||   ||| |||| || ||| ||||| |||||||| || ||||| | |||||||||||||||||||| ||||||||||||    
T  13589711 aaattgcgccatattgttctatttaaaatcatattttgattcaactcattaatctttaaatcttttctaatagtttctcttatagtttttctaagtcttc 13589612  T
Q  322 atctaactct 331  Q
    ||||| ||||    
T  13589611 atctacctct 13589602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 331
Target Start/End: Complemental strand, 28169624 - 28169515
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||  |||||| || |||||||||||||| ||  |||||||| ||||||||| | ||| ||| |||||||||||||||||||| || || ||||||    
T  28169624 aaattacaccataatattttatcataaaccatatttgaatccaactcattaatctcaaaatctttcctaatagtttctcttatagtttttttaggtcttc 28169525  T
Q  322 atctaactct 331  Q
     |||| ||||    
T  28169524 ctctacctct 28169515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 280
Target Start/End: Complemental strand, 31716052 - 31715995
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctcta 280  Q
    |||||||| |||||||||||||| ||||||||| || ||||||||| |||||||||||    
T  31716052 aaattacgccataatgttctatcttaaaccatatttggatccaactaattaatctcta 31715995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 379
Target Start/End: Original strand, 35362700 - 35362857
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||| ||||||||||||||||| |||||| |||  ||||||| |||||| || | ||| ||| ||||||||||||  |||||| ||||| ||||||    
T  35362700 aaattacgccataatgttctatcatacaccatatttcagtccaactcattaatttccaaatctttcctaatagtttctccgatagtttttctaggtcttc 35362799  T
Q  322 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 379  Q
     |||  || ||| |||| || |  ||||||| || ||||| |||||| ||||| ||||    
T  35362800 ctctgcctatagggatttgactatcctccatttgatctactctccttgctacaaaatc 35362857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 224 - 379
Target Start/End: Complemental strand, 5908877 - 5908721
Alignment:
Q  224 aattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttca 322  Q
    |||||||  |||| ||||||||||||| |||| || ||||||||| |||||||  |  ||| || ||||||||||||||||||||| ||||| ||||||     
T  5908877 aattacgcaataaggttctatcataaatcatattttgatccaactcattaatccttggatcttttttaatagtttctcttatagtttttctaggtcttcc 5908778  T
Q  323 tctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 379  Q
    | |  ||||||||||  ||    |||||| ||| ||||| |||||||||||| ||||    
T  5908777 tatgtctctagtgatctgaccatcctccacctgatctactctccttactacaaaatc 5908721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 41444389 - 41444476
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctata--tcttcttaatagtttctcttatagtt 308  Q
    |||||||||  ||||||| |||||||||||||| || |||| |||  ||||||||||| |  | ||||||||||||||||||||||||    
T  41444389 aaattacgttgtaatgttatatcataaaccatattttgatcaaacccattaatctctaaaccttttcttaatagtttctcttatagtt 41444476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 236 - 338
Target Start/End: Complemental strand, 79246 - 79143
Alignment:
Q  236 atgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagt 334  Q
    ||||||||||| |  ||||| ||| ||||| || ||||||||||| ||||| |||||||||||||||||||||  ||||||| |||| |||   ||||||    
T  79246 atgttctatcacaggccatatttctatccagctcattaatctctagatctttcttaatagtttctcttatagtgtttctaagccttcctctgcttctagt 79147  T
Q  335 gatt 338  Q
    ||||    
T  79146 gatt 79143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 223 - 305
Target Start/End: Original strand, 2518448 - 2518531
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttata 305  Q
    |||||| | ||||||||||||||| ||| |||| ||||||| ||||||||||||| || ||||| || |||||||| |||||||    
T  2518448 aaattatgccataatgttctatcagaaatcatatttcgatcaaactgattaatctgtagatcttgctcaatagtttgtcttata 2518531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 231 - 341
Target Start/End: Original strand, 16994502 - 16994613
Alignment:
Q  231 tcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaact 329  Q
    |||||| ||||||| ||| | ||||  || |||||||| | ||||||||| ||| |||||||||||||||| ||||||| ||||| |||||| |||  ||    
T  16994502 tcataacgttctattatacatcatatctcaatccaactcaataatctctaaatcattcttaatagtttctcatatagtttttctaggtcttcctcttcct 16994601  T
Q  330 ctagtgattcga 341  Q
    | ||||||||||    
T  16994602 ccagtgattcga 16994613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 23023452 - 23023353
Alignment:
Q  228 acgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatcta 326  Q
    |||||||||| |||||||||| | |||  | | |||||||| |||||||| || ||||| |||| ||||||||||||||||| ||||| |||||| ||||    
T  23023452 acgtcataatattctatcatatatcatgttcctatccaactcattaatctgtagatctttcttagtagtttctcttatagtttttctaggtcttcctcta 23023353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 223 - 305
Target Start/End: Complemental strand, 36069834 - 36069751
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttata 305  Q
    |||||||| | |||||||||||||||||||||| ||| | |||||| ||||||||||| ||  || ||||||||||| ||||||    
T  36069834 aaattacgccgtaatgttctatcataaaccatatttctacccaactcattaatctctaaatatttgttaatagtttcccttata 36069751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 41971836 - 41971903
Alignment:
Q  219 aattaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt 286  Q
    ||||| |||| |||||||||||||||||||||| ||| |||  ||||||| ||||||||||| |||||    
T  41971836 aattatattaagtcataatgttctatcataaacaatatttcagtccaactcattaatctctaaatctt 41971903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 223 - 266
Target Start/End: Complemental strand, 42584591 - 42584548
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaa 266  Q
    ||||||||||||||||||||||||||||||||| || |||||||    
T  42584591 aaattacgtcataatgttctatcataaaccatatttggatccaa 42584548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 237 - 338
Target Start/End: Original strand, 45512558 - 45512661
Alignment:
Q  237 tgttctatcataaaccatacttcg-atccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagt 334  Q
    ||||||||||||||||||| || | ||| |||| ||||||||| |  |||| | |||||||||||||||||||| ||||| |||||| |||  |||||||    
T  45512558 tgttctatcataaaccatattttggatcgaactcattaatctccaagtctttcctaatagtttctcttatagtttttctaggtcttcctctgcctctagt 45512657  T
Q  335 gatt 338  Q
    ||||    
T  45512658 gatt 45512661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 338
Target Start/End: Complemental strand, 4011277 - 4011199
Alignment:
Q  261 atccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgatt 338  Q
    |||||||| |||||||| || ||||| |||||||||||||||||||||| ||||| |||||| |||  |||||| ||||    
T  4011277 atccaactcattaatctttagatctttcttaatagtttctcttatagtttttctaggtcttcctctgtctctagcgatt 4011199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 33076356 - 33076282
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagttt 297  Q
    ||||||| ||||||| |||||| |||||||||| || | | ||||| ||||||||||| ||||| ||||||||||    
T  33076356 aaattacatcataatattctattataaaccatattttggtacaactcattaatctctaaatctttttaatagttt 33076282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 223 - 315
Target Start/End: Original strand, 7615641 - 7615734
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctata-tcttcttaatagtttctcttatagttcttctaa 315  Q
    ||||||| ||||||| || |||||||||| ||| |||||||||||| |||||| | || | | ||||||||| ||||||||||| || ||||||    
T  7615641 aaattacatcataatattttatcataaactatatttcgatccaactcattaatttttaaatttttcttaatattttctcttataatttttctaa 7615734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 224 - 303
Target Start/End: Complemental strand, 16705979 - 16705898
Alignment:
Q  224 aattacgtcataatgttctatc-ataaaccatacttcgatccaactgattaatctcta-tatcttcttaatagtttctctta 303  Q
    ||||||| |||||||||| ||| ||| |||||| |||||||||||| |||||||||||   | |||||||||||||||||||    
T  16705979 aattacgccataatgttccatccatataccatatttcgatccaactcattaatctctagctttttcttaatagtttctctta 16705898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 223 - 379
Target Start/End: Complemental strand, 29700508 - 29700351
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||  |||||||||||||||||||| | | || | ||| ||| ||| ||||| |  |||| | || ||||||||||| ||||| ||||| ||||||    
T  29700508 aaattacaccataatgttctatcataaacaaaattttggtccgactcatttatctccaagtctttcctattagtttctcttttagtttttctaggtcttc 29700409  T
Q  322 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 379  Q
     |||| ||||||||||  || |  |||||||||  ||||| |||||||||||| ||||    
T  29700408 ctctacctctagtgatatgactatcctccatctaatctactctccttactacagaatc 29700351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 14459127 - 14459043
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatag 306  Q
    |||||||  |||||||||| ||||||||||||| || | || |||| ||||||||| | ||| ||| ||||||||||||||||||    
T  14459127 aaattacaccataatgttccatcataaaccatattttggtctaactcattaatctccaaatctttcctaatagtttctcttatag 14459043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 317
Target Start/End: Original strand, 16971843 - 16971899
Alignment:
Q  262 tccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagt 317  Q
    ||||||| |||||||| |||||| |||||||| ||||||||||||||| ||||||||    
T  16971843 tccaactcattaatctttatatccttcttaatcgtttctcttatagtttttctaagt 16971899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 351
Target Start/End: Complemental strand, 23492257 - 23492138
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactc 330  Q
    |||| |||||||||||| | |||| ||| |||||||| ||||||| ||| ||| |||| | |||||||||| |||||| ||||| |||||| ||||  ||    
T  23492257 catagtgttctatcatatatcatatttctatccaactcattaatcgctacatctttctgagtagtttctctaatagtt-ttctaggtcttcctctatatc 23492159  T
Q  331 tagtgattcgattgccctcca 351  Q
    |||||||| || | |||||||    
T  23492158 tagtgatttgactaccctcca 23492138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 326
Target Start/End: Complemental strand, 24558715 - 24558611
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    ||||||||||||||||||||||| | ||||||   ||  |||| || ||||||||||| ||| ||||||||| |||||||||| ||| ||||  ||||||    
T  24558715 aaattacgtcataatgttctatcgttaaccatgactcagtccagctcattaatctctaaatctttcttaataatttctcttattgtttttctcggtcttc 24558616  T
Q  322 atcta 326  Q
     ||||    
T  24558615 ctcta 24558611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 425
Target Start/End: Original strand, 35643825 - 35643869
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctact 425  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||    
T  35643825 acatgcccaaaccacctaagcatattttccaccatcttttctact 35643869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 323
Target Start/End: Original strand, 24739936 - 24739999
Alignment:
Q  261 atccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcat 323  Q
    |||||||||||||||||||| ||| |||| |||||||||||||||| || ||||| ||| ||||    
T  24739936 atccaactgattaatctctacatctttctcaatagtttctcttataatttttctaggtcgtcat 24739999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 371
Target Start/End: Complemental strand, 25985688 - 25985601
Alignment:
Q  284 cttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctccttact 371  Q
    ||||||||||||||| | | ||||| ||||| |||||| |||| ||||||||||| || | |||| |||||| ||||  |||||||||    
T  25985688 cttcttaatagtttcccatttagtttttctaggtcttcctctacctctagtgatttgactcccctacatctgatctagtctccttact 25985601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 323
Target Start/End: Original strand, 28269766 - 28269829
Alignment:
Q  260 gatccaactgattaatctctatatcttcttaatagtttctcttatagttcttctaagtcttcat 323  Q
    ||||||||| ||||| ||||| |||||  ||||||||||||||||| || ||||| ||||||||    
T  28269766 gatccaactcattaacctctaaatcttgctaatagtttctcttataatttttctaggtcttcat 28269829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 408
Target Start/End: Complemental strand, 38668126 - 38668075
Alignment:
Q  357 tctaccctccttactacataatcaacatgcccaaaccacctaagcctatttt 408  Q
    ||||| || |||||||||||||| ||||||||| ||||||||| ||||||||    
T  38668126 tctactcttcttactacataatctacatgcccagaccacctaaacctatttt 38668075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 379
Target Start/End: Original strand, 39953376 - 39953471
Alignment:
Q  284 cttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 379  Q
    |||| |||||||||||||| ||||| | ||| |||| |  ||| ||||||||||  ||||  ||| |||||| ||||| |||||||||||||||||    
T  39953376 cttcctaatagtttctcttttagttttcctaggtctacccctacctctagtgatctgattcgccttcatctgatctactctccttactacataatc 39953471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 45041366 - 45041444
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctct 301  Q
    |||||||| |||||||  ||||||||||||||| || ||||||||| ||||| ||||| ||| ||| |||||||||||||    
T  45041366 aaattacgccataatgcgctatcataaaccata-ttggatccaactcattaacctctaaatctttcctaatagtttctct 45041444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 425
Target Start/End: Original strand, 13171875 - 13171917
Alignment:
Q  383 atgcccaaaccacctaagcctattttccactgtcttttctact 425  Q
    ||||||||||||||||||| ||||||||||  |||||||||||    
T  13171875 atgcccaaaccacctaagcatattttccaccatcttttctact 13171917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 284 - 374
Target Start/End: Complemental strand, 32043760 - 32043670
Alignment:
Q  284 cttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctccttactaca 374  Q
    |||||| ||||||||||| |||||| || || ||||||  ||| ||||||||||| ||   ||||||||||| ||||  ||||||||||||    
T  32043760 cttcttgatagtttctctaatagtttttttaggtcttcccctacctctagtgatttgacacccctccatctgatctattctccttactaca 32043670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 379
Target Start/End: Original strand, 45331681 - 45331775
Alignment:
Q  285 ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 379  Q
    |||||||||| ||| || |||||| ||||| || ||| |||  ||| | ||||| |||  ||||||||||| ||||| |||||||||||||||||    
T  45331681 ttcttaataggttccctaatagtttttctaggttttcctctgcctcgattgatttgatgaccctccatctgatctactctccttactacataatc 45331775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 320
Target Start/End: Complemental strand, 10109036 - 10108947
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtctt 320  Q
    ||||||||||||||||| | ||||  || ||| ||||  |||||||||| ||||| |||| ||||||||||||| ||| ||||| |||||    
T  10109036 cataatgttctatcatataacatatctctatcaaactcgttaatctctagatctttcttattagtttctcttatggtttttctaggtctt 10108947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 35324053 - 35324000
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaatta 223  Q
    |||||||||||| |||||||||||||| | | |||| |||||| ||||||||||    
T  35324053 aacaacaaccaagccttatcccactaagtggggtcggctacgtggatcaaatta 35324000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 371
Target Start/End: Complemental strand, 37826502 - 37826374
Alignment:
Q  240 tctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattc 339  Q
    ||||||||| |||||| ||| ||||||||   ||||||||| |||||   |||||||||||||||||||  |||| |||| | |||  |||||||||||     
T  37826502 tctatcatataccatatttctatccaactcgctaatctctagatctt---aatagtttctcttatagtttatctaggtctccctctgcctctagtgattt 37826406  T
Q  340 gattgccctccatctggtctaccctccttact 371  Q
    || | | || |||||| |||||  ||||||||    
T  37826405 gactactcttcatctgatctactttccttact 37826374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 425
Target Start/End: Complemental strand, 6483315 - 6483271
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctact 425  Q
    |||||||||||||||||||||| | |||||||  |||||||||||    
T  6483315 acatgcccaaaccacctaagccaagtttccaccctcttttctact 6483271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 425
Target Start/End: Complemental strand, 9695689 - 9695645
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctact 425  Q
    |||||||||||||||||||||| | |||||||  |||||||||||    
T  9695689 acatgcccaaaccacctaagccgagtttccaccatcttttctact 9695645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 2e-32; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 223 - 409
Target Start/End: Complemental strand, 8364788 - 8364602
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||| |||||||||||||||||||||||  |||  ||||||| |||||| |||| ||||| |||||||||||||||||||||| || || ||||||    
T  8364788 aaattacgccataatgttctatcataaaccatgtttcagtccaacttattaatttctaaatctttcttaatagtttctcttatagtttttttaggtcttc 8364689  T
Q  322 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatcaacatgcccaaaccacctaagcctattttc 409  Q
    ||||  ||||||||||  ||    |||||||||| ||||| |||||  ||||||  || |||||||||||||||||||||||||||||    
T  8364688 atcttcctctagtgatctgacaatcctccatctgatctactctcctagctacat-ctctacatgcccaaaccacctaagcctattttc 8364602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 223 - 337
Target Start/End: Original strand, 34555 - 34670
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||| |||||||||||||||||||||||| ||| |||||||| |||||||| || ||| |||||||| ||||||||||||||| ||||| ||||||    
T  34555 aaattacgccataatgttctatcataaaccatatttcaatccaactcattaatctttagatctttcttaatggtttctcttatagtttttctaggtcttc 34654  T
Q  322 atctaactctagtgat 337  Q
     |||  ||||||||||    
T  34655 ctctgcctctagtgat 34670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 223 - 383
Target Start/End: Complemental strand, 31818763 - 31818602
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||| | | | ||| |||||||||||||||||||| ||||| ||||||    
T  31818763 aaattacgacataatgttctatcataaaccatactttgatccaactcattaatctccaaacctttcctaatagtttctcttatagtttttctaggtcttc 31818664  T
Q  322 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatcaaca 383  Q
      ||| || |||||||   | | |||||||| || |||||  |||||||| || ||||||||    
T  31818663 tcctacctttagtgatctcactaccctccatatgatctactttccttactgcagaatcaaca 31818602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 223 - 374
Target Start/End: Complemental strand, 24666043 - 24665891
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||| |||||||||||||||||||||||||| |||||||||||| ||| | ||||| ||  |||||||||||||||||| ||||| ||||| | ||||    
T  24666043 aaattaagtcataatgttctatcataaaccatatttcgatccaactcattgacctctaaatatttcttaatagtttctcttgtagttattctatgacttc 24665944  T
Q  322 atctaactctagtgattcgattgccctccatctggtctaccctccttactaca 374  Q
     |||  |||| ||||| ||| |   || |||||| ||||| ||||||||||||    
T  24665943 ctctgcctctggtgatccgactatgcttcatctgatctactctccttactaca 24665891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 170 - 331
Target Start/End: Complemental strand, 5096114 - 5095957
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| |||||||||||||| | |  ||| |||| ||||||||||||     || |||||||||||||||||||||||| || |||||||||     
T  5096114 aacaacaaccaaaccttatcccactaagtgggatcggctacatagatcaaatta-----cgccataatgttctatcataaaccatattttgatccaactc 5096020  T
Q  270 attaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactct 331  Q
    ||||| | ||| ||| ||| ||| |||||||||| ||||| ||||| |||||| |||| ||||    
T  5096019 attaaccactaaatctttcctaagagtttctcttctagtttttctaggtcttcctctacctct 5095957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 232 - 374
Target Start/End: Original strand, 9593767 - 9593908
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactc 330  Q
    |||||||||||||||||||||||| |  ||||||||| |||||||||||  || ||| ||||||||||||||||| || ||||| |||||| |||| |||    
T  9593767 cataatgttctatcataaaccatattgggatccaactcattaatctctaagtctttcctaatagtttctcttataatttttctaggtcttcctctacctc 9593866  T
Q  331 tagtgattcgattgccctccatctggtctaccctccttactaca 374  Q
    |  ||||| || |  |||||||||| ||||| || |||||||||    
T  9593867 t--tgatttgactctcctccatctgatctactcttcttactaca 9593908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 352
Target Start/End: Original strand, 10617323 - 10617414
Alignment:
Q  262 tccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccat 352  Q
    ||||||| ||||||||||| ||| |||||||| ||||||||||||||| ||||| || ||| |||| ||||||||||| || | ||||||||    
T  10617323 tccaactcattaatctctagatccttcttaatggtttctcttatagtttttctaggttttcttctacctctagtgatttgactcccctccat 10617414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 170 - 331
Target Start/End: Complemental strand, 12890855 - 12890698
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| |||||||||||||| | | |||| |||| | ||||||||||     || |||| ||||||||||||||||||| || |||| ||||     
T  12890855 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatta-----cgccatagtgttctatcataaaccatatttggatctaactc 12890761  T
Q  270 attaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttcatctaactct 331  Q
    ||| |  |||| || |||  |||| ||||||||||||||| | ||| ||||||||||| ||||    
T  12890760 attgacgtctaaatcctttctaatggtttctcttatagttttcctaggtcttcatctacctct 12890698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 223 - 379
Target Start/End: Original strand, 33997594 - 33997749
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctcta-tatcttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||| ||| |||||||||| |||||  |||||| ||| |||||||| |||||||||||   | |||||||||||||||||||||||| | | | ||||||    
T  33997594 aaatgacgccataatgttcaatcatgtaccatatttctatccaactcattaatctctaggcttttcttaatagtttctcttatagttttccaaggtcttc 33997693  T
Q  322 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 379  Q
     |||  |||||||| || || | |||||||||| | |||  |||||||||||| ||||    
T  33997694 ctctgcctctagtgttttgactaccctccatctagccta--ctccttactacaaaatc 33997749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 232 - 361
Target Start/End: Original strand, 35199682 - 35199811
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactc 330  Q
    ||||||||||||||||| || ||| ||| ||| |||| ||||||||||| ||||| | ||||||||||| ||||| || |||||| ||||  |||| |||    
T  35199682 cataatgttctatcatatac-atatttctatctaactcattaatctctagatctttcctaatagtttcttttataatttttctaattcttactctagctc 35199780  T
Q  331 tagtgattcgattgccctccatctggtctac 361  Q
    |||||||  || | ||||||||||| |||||    
T  35199781 tagtgatatgactaccctccatctgatctac 35199811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 7513040 - 7513079
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgat 262  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  7513040 aaattacgtcataatgttctatcataaaccatatttcgat 7513079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 228 - 308
Target Start/End: Original strand, 1748000 - 1748081
Alignment:
Q  228 acgtcataatgttctatcataaaccatacttcgatccaactgattaatctctata-tcttcttaatagtttctcttatagtt 308  Q
    ||||| ||||||||||||||| || ||| ||| |||||||| ||||||||||| | | |||||| |||||||||| ||||||    
T  1748000 acgtcgtaatgttctatcatatactatatttctatccaactcattaatctctaaatttttcttagtagtttctctaatagtt 1748081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 223 - 299
Target Start/End: Original strand, 14389211 - 14389288
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttct 299  Q
    |||||||| | ||||||| |||||||||||||| || |||| |||| ||||||||||| ||| ||||||| |||||||    
T  14389211 aaattacgccctaatgttatatcataaaccatatttggatctaacttattaatctctaaatctttcttaagagtttct 14389288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 235 - 314
Target Start/End: Original strand, 31831920 - 31832001
Alignment:
Q  235 aatgttctatcataaa-ccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttcta 314  Q
    |||||||||||||||| ||||  || ||||||||| | ||||||||| ||||| ||||||||||||||| |||||| |||||    
T  31831920 aatgttctatcataaaaccatgtttggatccaactcagtaatctctagatctttcttaatagtttctctgatagtttttcta 31832001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 326
Target Start/End: Original strand, 6055821 - 6055925
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||||| ||||||||||| ||| || ||| || |||| |||| ||||| ||||| ||| ||| ||||||||||||||| |||| || || ||||||    
T  6055821 aaattacgtcgtaatgttctattatacactatatttggatctaactcattaacctctaaatctttcataatagtttctcttaaagtttttataggtcttc 6055920  T
Q  322 atcta 326  Q
     ||||    
T  6055921 ctcta 6055925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 425
Target Start/End: Original strand, 9593930 - 9593974
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctact 425  Q
    ||||||||||||||||||||||||||||| ||  |||||||||||    
T  9593930 acatgcccaaaccacctaagcctattttctaccatcttttctact 9593974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 280
Target Start/End: Complemental strand, 33080368 - 33080321
Alignment:
Q  233 ataatgttctatcataaaccatacttcgatccaactgattaatctcta 280  Q
    |||||||| |||||||||||||| |||||| ||||| |||||||||||    
T  33080368 ataatgttatatcataaaccatatttcgatacaactcattaatctcta 33080321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 379
Target Start/End: Complemental strand, 579698 - 579493
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| | |||||||||||| | |  ||| |||| ||||||||||||     || |||||| |||  ||| |||||||| || ||| ||| |     
T  579698 aacaacaaccaagctttatcccactaagtgggatcggctacatagatcaaatta-----cgccataattttccttcagaaaccatattttgattcaagtc 579604  T
Q  270 attaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctcctt 368  Q
    | |||| |||||||||| ||||||||||||||||| |||| ||  | |||||  |||  ||||||||||  || |  |||||||||| || || ||||||    
T  579603 actaatttctatatctttcttaatagtttctcttacagttttttgaggtctttctctgcctctagtgatcagactatcctccatctgatcaactctcctt 579504  T
Q  369 actacataatc 379  Q
    |||| ||||||    
T  579503 actatataatc 579493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 379
Target Start/End: Original strand, 4948417 - 4948511
Alignment:
Q  285 ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 379  Q
    |||| |||||||| |||| ||||| || || |||||| |||| |||||||| || || |  | |||||||| ||||| |||||||||||||||||    
T  4948417 ttctcaatagtttttcttttagtttttgtaggtcttcctctacctctagtggtttgactatcttccatctgatctactctccttactacataatc 4948511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 379
Target Start/End: Original strand, 4955388 - 4955482
Alignment:
Q  285 ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 379  Q
    |||| |||||||| |||| ||||| || || |||||| |||| |||||||| || || |  | |||||||| ||||| |||||||||||||||||    
T  4955388 ttctcaatagtttttcttttagtttttgtaggtcttcctctacctctagtggtttgactatcttccatctgatctactctccttactacataatc 4955482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 303
Target Start/End: Original strand, 43102 - 43183
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctctta 303  Q
    |||||||  ||||||  |||||||||||| ||| || ||||||||| |||| |||||| ||| || ||||||||||||||||    
T  43102 aaattacaccataatactctatcataaactatattttgatccaactcattactctctagatctttattaatagtttctctta 43183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 280
Target Start/End: Original strand, 3210558 - 3210615
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctcta 280  Q
    |||||||  ||||||||||||||||||  |||| ||| |||||||| |||||||||||    
T  3210558 aaattacaccataatgttctatcataactcatatttccatccaactcattaatctcta 3210615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 385
Target Start/End: Original strand, 6906916 - 6907040
Alignment:
Q  261 atccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtct 359  Q
    ||||||||  ||||| |||| ||||| ||||||||| ||| |||||| | ||| |  |||||||||| |||| |||||| || | |||| |||||| |||    
T  6906916 atccaactcgttaatatctagatctttcttaatagtctct-ttatagcttttcaagatcttcatctacctctcgtgatttgactaccctgcatctgatct 6907014  T
Q  360 accctccttactacataatcaacatg 385  Q
    || |||||||||||| |||| |||||    
T  6907015 actctccttactacaaaatctacatg 6907040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 280
Target Start/End: Complemental strand, 9568931 - 9568874
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctcta 280  Q
    |||||||| ||||| | |||||||||||||||| || ||||||||| | |||||||||    
T  9568931 aaattacgccataacggtctatcataaaccatatttggatccaactcaataatctcta 9568874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 234 - 337
Target Start/End: Complemental strand, 547215 - 547111
Alignment:
Q  234 taatgttctatcataaaccatacttcgatccaactgattaatctctatatcttctt-aatagtttctcttatagttcttctaagtcttcatctaactcta 332  Q
    ||||||||||||||| |||||| ||   ||||||| |||||| | || || || || |||||||||||| |||||| |||| ||||||  ||| ||||||    
T  547215 taatgttctatcatacaccataatttagtccaactcattaatttttaaattttgtttaatagtttctctaatagtttttcttagtctttctctgactcta 547116  T
Q  333 gtgat 337  Q
    |||||    
T  547115 gtgat 547111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 230 - 321
Target Start/End: Original strand, 25493907 - 25493999
Alignment:
Q  230 gtcataatgttctatcataaaccatacttcgatccaactgattaatctctata-tcttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||| |||| |||| ||||||||| ||  || ||||| |||||||| || | | ||| | |||||||||||||||||||||||| ||||||    
T  25493907 gtcatattgttttatcgtaaaccatatttaaattcaactcattaatctataaacttttcctgatagtttctcttatagttcttctaggtcttc 25493999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 2e-31; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 223 - 379
Target Start/End: Original strand, 28627983 - 28628140
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||| |||||||||||||||||||||| | ||  |||||||| ||||||||||| ||||| | |||||||||||||||||||| ||||| ||||||    
T  28627983 aaattacgccataatgttctatcataaaccacatttgcatccaactcattaatctctaaatctttcctaatagtttctcttatagtttttctaggtcttc 28628082  T
Q  322 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 379  Q
     |||| |||| |||||| || |  |||||||| | ||||| |||||||||||||||||    
T  28628083 ctctacctcttgtgatttgactatcctccatcggatctactctccttactacataatc 28628140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 239 - 355
Target Start/End: Original strand, 24549754 - 24549871
Alignment:
Q  239 ttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgat 337  Q
    |||||||| | |||||| ||| |||||||| ||||||||||| ||||| |||||||||||||||||||||||||  | |||||| |||| ||||||||||    
T  24549754 ttctatcaaataccatatttcaatccaactcattaatctctagatctttcttaatagtttctcttatagttctttcaggtcttcttctacctctagtgat 24549853  T
Q  338 tcgattgccctccatctg 355  Q
    | || | |||||||||||    
T  24549854 ttgaatcccctccatctg 24549871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 223 - 379
Target Start/End: Original strand, 38135263 - 38135419
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||| |||||| ||||||||||| ||||| |||| ||||||| ||||||||||| ||| || |||||||||||||||||| || ||||| ||||||    
T  38135263 aaattacgccataatattctatcataacccatatttcggtccaactcattaatctctaaatcttttttaatagtttctcttatactttttctaggtcttc 38135362  T
Q  322 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 379  Q
    ||||  ||||| ||||  || |  |||||||||| ||||  |||||||||||| ||||    
T  38135363 atctgcctctaatgatctgactatcctccatctgatcta-tctccttactacaaaatc 38135419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 223 - 314
Target Start/End: Complemental strand, 1569248 - 1569156
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttcta 314  Q
    |||||||| | |||||||||||||||||||||| || ||||||||| ||||||||||| ||| |||||||||||| ||||||||||| |||||    
T  1569248 aaattacgccgtaatgttctatcataaaccatattttgatccaactcattaatctctagatctttcttaatagttactcttatagtttttcta 1569156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 21517430 - 21517530
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||||||||||||| ||||||||| |||| || ||||||||| ||||||||||| ||  || ||||||||||||||||||||| ||||| ||||||    
T  21517430 aaattacgtcataatgttatatcataaatcatatttggatccaacttattaatctctaaatattttttaatagtttctcttatagtttttctaggtcttc 21517529  T
Q  322 a 322  Q
    |    
T  21517530 a 21517530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 223 - 333
Target Start/End: Complemental strand, 45601708 - 45601597
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||  |||| |||||||||||||| |||| || ||||||||| ||||||||||| ||| |||||||| ||||||||||||||| ||||| ||||||    
T  45601708 aaattacaccatagtgttctatcataaatcatattttgatccaactcattaatctctagatctttcttaatggtttctcttatagtttttctaggtcttc 45601609  T
Q  322 atctaactctag 333  Q
     |||| ||||||    
T  45601608 ctctacctctag 45601597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 170 - 331
Target Start/End: Original strand, 40979930 - 40980087
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| |||||||||||||| | | |||| |||| | ||||||||||     || |||| ||||||||||||||||||| || |||||||||     
T  40979930 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatta-----cgccatagtgttctatcataaaccatatttggatccaactc 40980024  T
Q  270 attaatctctatatcttct-taatagtttctcttatagttcttctaagtcttcatctaactct 331  Q
    ||| | ||||| ||||| | |||||||||||||||||||| | ||| |||||| |||| ||||    
T  40980025 attgacctctaaatcttttctaatagtttctcttatagttttcctaggtcttcctctacctct 40980087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 170 - 286
Target Start/End: Original strand, 36101779 - 36101890
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| |||||||||||||| | | ||| ||||| | ||||     ||||||||||||||||||||||||||||||||| || |||||||||     
T  36101779 aacaacaaccaagccttatcccactaagtggggtcaactacatggatc-----aaattacgtcataatgttctatcataaaccatattttgatccaactc 36101873  T
Q  270 attaatctctatatctt 286  Q
    |||||||| || |||||    
T  36101874 attaatctataaatctt 36101890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 223 - 409
Target Start/End: Original strand, 47796202 - 47796388
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||| |||||| ||||||||||||||||| |||  ||||||| |||||| |||| ||| ||| |||||| |||||||||| || ||||  ||||||    
T  47796202 aaattacgccataatattctatcataaaccatatttcagtccaacttattaatttctaaatctttcctaataggttctcttataatttttctcggtcttc 47796301  T
Q  322 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatcaacatgcccaaaccacctaagcctattttc 409  Q
    ||||  | ||||||||  ||    |||||||||| ||||| |||||  ||||||  |  |||||||||||||||||| ||||||||||    
T  47796302 atctgcccctagtgatctgacaatcctccatctgatctactctcctagctacat-ctatacatgcccaaaccacctacgcctattttc 47796388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 232 - 321
Target Start/End: Complemental strand, 37976458 - 37976368
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||||||||||||||||||| || ||||||||| ||||||||||| ||| ||| || ||||||| ||||||||| ||||| ||||||    
T  37976458 cataatgttctatcataaaccatatttggatccaactcattaatctctaaatctttcatattagtttcacttatagtttttctaggtcttc 37976368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 232 - 374
Target Start/End: Complemental strand, 47848896 - 47848754
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagtttctcttatagttcttctaagtcttcatctaactct 331  Q
    |||||||||||||||||||||||| || |||||| || ||||||| | | |||||   ||||||||||||||||||| |||||  ||||| |||  ||||    
T  47848896 cataatgttctatcataaaccatatttggatccagctcattaatccccaaatctttccaatagtttctcttatagtttttctagttcttcctctgcctct 47848797  T
Q  332 agtgattcgattgccctccatctggtctaccctccttactaca 374  Q
    ||||||  || |  |||||||||| ||||| ||||||| ||||    
T  47848796 agtgatcagactatcctccatctgatctactctccttagtaca 47848754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 223 - 314
Target Start/End: Original strand, 36239846 - 36239938
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctata-tcttcttaatagtttctcttatagttcttcta 314  Q
    |||||||| ||||||||||||||||||| |||| || |||||||||  |||||||||| | | ||| |||||||||||||||||||| |||||    
T  36239846 aaattacgccataatgttctatcataaagcatatttggatccaactcgttaatctctaaatttttcctaatagtttctcttatagtttttcta 36239938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 223 - 337
Target Start/End: Original strand, 44401177 - 44401290
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||||||||||||||||||||||| |||| || |||  ||||  |||||||||| ||| ||||||||||||||||||||| || ||||| ||| ||    
T  44401177 aaattacgtcataatgttctatcataaaacatattttgat--aactcgttaatctctaaatctttcttaatagtttctcttataatttttctaggtcatc 44401274  T
Q  322 atctaactctagtgat 337  Q
     || | ||||||||||    
T  44401275 ctccacctctagtgat 44401290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 231 - 320
Target Start/End: Complemental strand, 28858269 - 28858179
Alignment:
Q  231 tcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtctt 320  Q
    |||||| ||||||||||| |  ||| ||| |||||||| ||||||||||| ||||| ||||||||||| |||||||||| |||||||||||    
T  28858269 tcataacgttctatcatataaaatatttctatccaacttattaatctctagatctttcttaatagtttgtcttatagtttttctaagtctt 28858179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 170 - 274
Target Start/End: Complemental strand, 5418354 - 5418247
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaatta---aattacgtcataatgttctatcataaaccatacttcgatccaa 266  Q
    |||||||||||| |||||||||||||||| | ||||||||| | ||||||||||    || |   |||||||||||||||||||||||| |||| |||||    
T  5418354 aacaacaaccaagccttatcccactaaatggggtcgactacatggatcaaattacgccataaatccataatgttctatcataaaccatatttcggtccaa 5418255  T
Q  267 ctgattaa 274  Q
    || |||||    
T  5418254 ctcattaa 5418247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 321
Target Start/End: Original strand, 9210754 - 9210853
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctata-tcttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||| ||||||||| |||||||||||||| || ||||||||| ||||| ||||| | | ||| ||| |||||||||||||||| | ||| ||||||    
T  9210754 aaattacgccataatgttgtatcataaaccatatttggatccaactcattaacctctaaatttttcctaaaagtttctcttatagttttcctaggtcttc 9210853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 326
Target Start/End: Complemental strand, 12966239 - 12966144
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatcta 326  Q
    ||||||| | ||||||| |||||| ||| |||||| | ||||||||||| || || |||||||||||||||||||||| ||||| |||||| ||||    
T  12966239 cataatgatttatcatataccatatttctatccaaatcattaatctctaaatatttcttaatagtttctcttatagtttttctaggtcttcctcta 12966144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 236 - 297
Target Start/End: Original strand, 28542007 - 28542069
Alignment:
Q  236 atgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagttt 297  Q
    |||||||||||||||||||| ||| |||||||| ||||||||||| ||| |||||||||||||    
T  28542007 atgttctatcataaaccatagttcaatccaactcattaatctctaaatctttcttaatagttt 28542069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 223 - 277
Target Start/End: Original strand, 30814175 - 30814229
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatct 277  Q
    ||||||||| |||||||||||||||||| |||| |||||||||||| ||||||||    
T  30814175 aaattacgtgataatgttctatcataaaacatatttcgatccaactaattaatct 30814229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 223 - 300
Target Start/End: Complemental strand, 35922485 - 35922407
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctc 300  Q
    |||||| ||||||||||||||||||||| |||| || ||| ||||| ||||| ||||| ||| ||||||||||||||||    
T  35922485 aaattaggtcataatgttctatcataaatcatatttagattcaactcattaacctctaaatctttcttaatagtttctc 35922407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 233 - 326
Target Start/End: Complemental strand, 36136986 - 36136892
Alignment:
Q  233 ataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatcta 326  Q
    ||||||||||||||||||||||| || ||||||| | |||||  |||| ||| |||  ||||||||||||||||||| ||||| |||||| ||||    
T  36136986 ataatgttctatcataaaccatatttggatccaattcattaacatctaaatctttccaaatagtttctcttatagtttttctaggtcttcctcta 36136892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 223 - 304
Target Start/End: Original strand, 40391873 - 40391955
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttat 304  Q
    |||||||| |||||||||||||||||| ||||| |||| ||||||| |||||| |||| ||| ||| || |||||||||||||    
T  40391873 aaattacgccataatgttctatcataagccatatttcggtccaacttattaatttctaaatcattcctactagtttctcttat 40391955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 280
Target Start/End: Original strand, 34341445 - 34341502
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctcta 280  Q
    |||||||| |||||||||||||||||||||||| ||| |||||||| ||| |||||||    
T  34341445 aaattacgccataatgttctatcataaaccatatttcaatccaactcattcatctcta 34341502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 2882786 - 2882838
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaat 275  Q
    |||||||| |||||||||||||||||||||||  |||||||||||| ||||||    
T  2882786 aaattacgccataatgttctatcataaaccatgtttcgatccaactcattaat 2882838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 280
Target Start/End: Original strand, 5577546 - 5577594
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctcta 280  Q
    ||||||||||||||||||||||||||| ||||||||| |||| ||||||    
T  5577546 cataatgttctatcataaaccatacttggatccaactcattagtctcta 5577594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 297
Target Start/End: Original strand, 27893565 - 27893688
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| ||||||| |||||| ||| |||| |||| |  |||||||||      | ||||||||||||||||||| |||| |||| |||| ||     
T  27893565 aacaacaaccaagccttatcgcactaagtagggtcggctacatgaatcaaattat-----gccataatgttctatcataaaacatatttcggtccagctc 27893659  T
Q  270 attaatctctatatc-ttcttaatagttt 297  Q
    ||||||||||| ||| |||||||||||||    
T  27893660 attaatctctaaatctttcttaatagttt 27893688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 425
Target Start/End: Complemental strand, 40169707 - 40169663
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctact 425  Q
    ||||||||||||||||||||||||||||||||  |||||||||||    
T  40169707 acatgcccaaaccacctaagcctattttccaccatcttttctact 40169663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 425
Target Start/End: Complemental strand, 47848732 - 47848688
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctact 425  Q
    ||||||||||||||||||||||||||||||||  |||||||||||    
T  47848732 acatgcccaaaccacctaagcctattttccaccatcttttctact 47848688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 14593931 - 14593876
Alignment:
Q  283 tcttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgatt 338  Q
    |||||||||||||||||||||||||| ||||| ||||||  ||| |||||||||||    
T  14593931 tcttcttaatagtttctcttatagtttttctaggtcttcccctacctctagtgatt 14593876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 337
Target Start/End: Complemental strand, 22174223 - 22174117
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttc-ttaatagtttctcttatagttcttctaagtcttcatctaactc 330  Q
    ||||||||||||||| | |||||| ||| ||| || | ||||||||||| |||||  || |||||||||||||||||| ||||| || ||| |||  |||    
T  22174223 cataatgttctatcacataccatatttctatctaattcattaatctctagatctttgtttatagtttctcttatagtttttctacgttttcctctgcctc 22174124  T
Q  331 tagtgat 337  Q
    |||||||    
T  22174123 tagtgat 22174117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 337
Target Start/End: Original strand, 26741944 - 26742061
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctctt--atagttcttctaagtct 319  Q
    |||||||| |||||||||||||||||||||||| |||| ||||||| ||| || || | ||  ||| ||||||||| ||||  |||||| ||||| ||||    
T  26741944 aaattacgccataatgttctatcataaaccatatttcggtccaactcatttatttccaaatatttcctaatagtttatctttgatagtttttctacgtct 26742043  T
Q  320 tcatctaactctagtgat 337  Q
    || |||  ||||||||||    
T  26742044 tcctctgcctctagtgat 26742061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 423
Target Start/End: Complemental strand, 42187528 - 42187486
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttcta 423  Q
    ||||||||||||||||||||||||||||||||  |||||||||    
T  42187528 acatgcccaaaccacctaagcctattttccaccatcttttcta 42187486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 223 - 307
Target Start/End: Complemental strand, 14057710 - 14057625
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagt 307  Q
    |||||||  |||||||||||||||||||||||| ||  ||| |||  ||||| ||||| ||| ||| |||||||||||||||||||    
T  14057710 aaattaccccataatgttctatcataaaccatatttgaatcgaacgcattaacctctaaatctttcctaatagtttctcttatagt 14057625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 223 - 307
Target Start/End: Complemental strand, 14367738 - 14367653
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagt 307  Q
    |||||||  |||||||||||||||||||||||| ||  ||| |||  ||||| ||||| ||| ||| |||||||||||||||||||    
T  14367738 aaattaccccataatgttctatcataaaccatatttgaatcgaacgcattaacctctaaatctttcctaatagtttctcttatagt 14367653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 233 - 371
Target Start/End: Complemental strand, 28359476 - 28359340
Alignment:
Q  233 ataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagtttctcttatagttcttctaagtcttcatctaactct- 331  Q
    |||||||||||||||| |||||  ||| |||||| | ||||||||||| |   |||||||| ||||||||||| || ||||| | |||  |||| ||||     
T  28359476 ataatgttctatcatataccatttttctatccaattaattaatctctaga---tcttaatattttctcttataatttttctaggactttctctacctcta 28359380  T
Q  332 agtgattcgattgccctccatctggtctaccctccttact 371  Q
    ||||||| || | ||||||||||| | ||| |||||||||    
T  28359379 agtgatttgactaccctccatctgatatactctccttact 28359340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 170 - 305
Target Start/End: Complemental strand, 42187721 - 42187590
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataa-tgttctatcataaaccatacttcgatccaact 268  Q
    ||||||||| || |||||||||||||| | | |||| |||| | ||||||||||     || ||||| ||||||||||||||||| | || |||||||||    
T  42187721 aacaacaacaaagccttatcccactaagtggggtcggctacatggatcaaatta-----cgccataaatgttctatcataaacca-atttggatccaact 42187628  T
Q  269 gattaatctctatat-cttcttaatagtttctcttata 305  Q
     ||||||||||| ||  ||| |||||||||||||||||    
T  42187627 aattaatctctaaatatttcctaatagtttctcttata 42187590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 223 - 303
Target Start/End: Complemental strand, 43282062 - 43281982
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctctta 303  Q
    |||||||| |||| |||| | |||||||||||| || ||||||||| ||||||||||| ||||| |||||| ||||||||||    
T  43282062 aaattacgccata-tgttttgtcataaaccatattttgatccaactcattaatctctagatcttacttaattgtttctctta 43281982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 238 - 314
Target Start/End: Complemental strand, 43282626 - 43282549
Alignment:
Q  238 gttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttcta 314  Q
    ||||||| |||||||||| |||||||||||| | ||| ||| | | ||| |||||||||||||||||||||| |||||    
T  43282626 gttctataataaaccatatttcgatccaactcaataacctcaagaacttacttaatagtttctcttatagtttttcta 43282549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 32368407 - 32368503
Alignment:
Q  243 atcataaaccatacttcgatccaactgattaatctctatatcttc-ttaatagtttctcttatagttcttctaagtcttcatctaactctagtgatt 338  Q
    |||||| |||||| |||||||||||| | ||||||||| |||||| ||||||| ||||||||||| | |||||  ||||| | |  |||||||||||    
T  32368407 atcatataccatatttcgatccaactcactaatctctaaatcttccttaatagcttctcttatagattttctagatcttcctttgcctctagtgatt 32368503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 1758476 - 1758441
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatactt 258  Q
    ||||||||| ||||||||||||||||||||||||||    
T  1758476 aaattacgtaataatgttctatcataaaccatactt 1758441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 338
Target Start/End: Complemental strand, 16013454 - 16013399
Alignment:
Q  283 tcttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgatt 338  Q
    |||||||||||||||||||||||||| ||||| ||||||  ||| |||| ||||||    
T  16013454 tcttcttaatagtttctcttatagtttttctaggtcttcccctacctctggtgatt 16013399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 307
Target Start/End: Complemental strand, 30664798 - 30664715
Alignment:
Q  225 attacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagt 307  Q
    ||||||||| | | || |||||||||||||  |  ||||||||| ||||||||||| ||| ||||||||||||||| |||||||    
T  30664798 attacgtcaaagtattgtatcataaaccatgttatgatccaactcattaatctctagatctttcttaatagtttcttttatagt 30664715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 412
Target Start/End: Complemental strand, 35713753 - 35713722
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccac 412  Q
    ||||||||||||||||||||||||||||||||    
T  35713753 acatgcccaaaccacctaagcctattttccac 35713722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 338
Target Start/End: Complemental strand, 40830393 - 40830318
Alignment:
Q  264 caactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgatt 338  Q
    ||||| |||||| |||| ||| |||||||||||||||||||||| | ||||| |||||| |||  |||||||||||    
T  40830393 caactcattaatttctagatccttcttaatagtttctcttatagattttctaggtcttcctctgtctctagtgatt 40830318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 338
Target Start/End: Original strand, 42177073 - 42177184
Alignment:
Q  228 acgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatcta 326  Q
    |||||||||||||| |||||| |||||| ||  ||  |||| ||| ||||||| ||||| |||||||| ||||||||||| | ||||| |||||| || |    
T  42177073 acgtcataatgttcaatcatataccatatttttatgaaactcatttatctctagatctttcttaatagattctcttataggttttctacgtcttcctcca 42177172  T
Q  327 actctagtgatt 338  Q
     ||||| |||||    
T  42177173 cctctaatgatt 42177184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 331
Target Start/End: Complemental strand, 1011326 - 1011170
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| |||||||||||||| | | |||| |||| |||||||||||| |      |||||||||||||| ||||||||| || ||||||| |     
T  1011326 aacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaattacac-----cataatgttctatcctaaaccata-ttggatccaaatc 1011233  T
Q  270 attaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttcatctaactct 331  Q
    ||||| || || ||  ||| ||||| ||||||| ||| || ||||| |||||| |||| ||||    
T  1011232 attaacctttaaatatttcctaataatttctctcataatttttctaggtcttcctctacctct 1011170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 266
Target Start/End: Original strand, 30997630 - 30997676
Alignment:
Q  220 attaaattacgtcataatgttctatcataaaccatacttcgatccaa 266  Q
    ||||||||| |||||||||||| ||| ||||||||| ||||||||||    
T  30997630 attaaattaggtcataatgttcaatcgtaaaccatatttcgatccaa 30997676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 286
Target Start/End: Complemental strand, 33732057 - 33732003
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt 286  Q
    |||||||||||||||||||||||| |||||||  ||| |||||||| || |||||    
T  33732057 cataatgttctatcataaaccatatttcgatctcactcattaatctttagatctt 33732003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 321
Target Start/End: Complemental strand, 35713927 - 35713831
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||| |||||||||||||||||||| ||| |||||| ||||| | | ||||  || | ||||||||| ||||| |||||||| ||||| ||||||    
T  35713927 aaattacgccataatgttctatcataaacaatatttcgattcaactcaat-atctagat-tattcttaataatttctgttatagtttttctaggtcttc 35713831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 452
Target Start/End: Complemental strand, 38920852 - 38920785
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctactgtctatagctgctaccccaacttcctc 452  Q
    ||||||||||||||| |||||||| |||||||  |||||||||    |||||| ||||||||||||| ||||    
T  38920852 acatgcccaaaccacttaagcctagtttccaccatcttttcta----ctataggtgctaccccaactccctc 38920785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 331
Target Start/End: Complemental strand, 43491588 - 43491431
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| |||||||||||||| | | |||| |||| | ||| |||||| ||     |||| |||||||||||||| |||| || |||||||||     
T  43491588 aacaacaaccaagccttatcccactaagtggggtcggctacatggatgaaattacat-----catagtgttctatcataaatcatatttggatccaactt 43491494  T
Q  270 attaatctctata-tcttcttaatagtttctcttatagttcttctaagtcttcatctaactct 331  Q
    ||| | ||||| | ||||  |||| |||||||||||| || | ||| |||||| |||| ||||    
T  43491493 attgacctctaaattctttctaatggtttctcttataattttcctaggtcttcctctacctct 43491431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 260
Target Start/End: Original strand, 26332923 - 26332960
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcg 260  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  26332923 aaattacgtcataatattctatcataaaccatatttcg 26332960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 337
Target Start/End: Original strand, 30814771 - 30814836
Alignment:
Q  273 aatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgat 337  Q
    |||||||| ||||| |||||||||||||||||||||  ||||| |||||| |||  ||||||||||    
T  30814771 aatctctagatctttcttaatagtttctcttatagtgtttctaggtcttcctctgcctctagtgat 30814836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 268
Target Start/End: Original strand, 34926572 - 34926617
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaact 268  Q
    |||||||| ||| | |||||||||||||||||| ||||||||||||    
T  34926572 aaattacgccattaagttctatcataaaccatatttcgatccaact 34926617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 303
Target Start/End: Original strand, 40138998 - 40139079
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctctta 303  Q
    |||| |||||||||| ||||||||||   |||| ||| ||| |||  ||||||||||| ||| |||||||||||||||||||    
T  40138998 aaatgacgtcataatattctatcatatgtcatatttctatcaaacgcattaatctctagatctttcttaatagtttctctta 40139079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 425
Target Start/End: Original strand, 7189450 - 7189494
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctact 425  Q
    ||||||||||||||||||||| ||||||| ||  |||||||||||    
T  7189450 acatgcccaaaccacctaagcttattttctaccatcttttctact 7189494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 233 - 331
Target Start/End: Original strand, 28562425 - 28562525
Alignment:
Q  233 ataatgttctatcataaa-ccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactc 330  Q
    |||||||| ||||||||| ||||| |  |||||||||  |||||||||| ||||| | ||||||||||||||||| || ||||| ||| || |||| |||    
T  28562425 ataatgttatatcataaaaccatattaggatccaactcgttaatctctaaatctttcataatagtttctcttatattttttctaggtcatcctctacctc 28562524  T
Q  331 t 331  Q
    |    
T  28562525 t 28562525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 425
Target Start/End: Original strand, 28628157 - 28628201
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctact 425  Q
    |||||||||||||||||||||| |||||||||  || ||||||||    
T  28628157 acatgcccaaaccacctaagccaattttccaccatcatttctact 28628201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 421
Target Start/End: Original strand, 38135436 - 38135476
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttc 421  Q
    ||||| ||||||||||||||||||||||||||  |||||||    
T  38135436 acatgtccaaaccacctaagcctattttccaccatcttttc 38135476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 170 - 250
Target Start/End: Complemental strand, 44951435 - 44951360
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaa 250  Q
    |||||||||||| |||||| ||||||| || ||||| |||| | ||||     ||||||||||||| ||||||||||||||    
T  44951435 aacaacaaccaaaccttataccactaagtattgtcggctacatggatc-----aaattacgtcatagtgttctatcataaa 44951360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 48515403 - 48515371
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccata 255  Q
    |||||||| ||||||||||||||||||||||||    
T  48515403 aaattacgccataatgttctatcataaaccata 48515371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 1e-29; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 235 - 384
Target Start/End: Original strand, 26784402 - 26784552
Alignment:
Q  235 aatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctag 333  Q
    |||||| ||||||| |||||| ||| || ||||| ||||||||||||||||| |||||||||||||||||||||| ||||| |||||  |||  ||||||    
T  26784402 aatgttttatcatataccatatttctattcaactcattaatctctatatctttcttaatagtttctcttatagtttttctaggtctttctctgcctctag 26784501  T
Q  334 tgattcgattgccctccatctggtctaccctccttactacataatcaacat 384  Q
    ||||| || | ||||||||||  |||||||||||||||||| |||| ||||    
T  26784502 tgatttgactaccctccatcttatctaccctccttactacaaaatccacat 26784552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 235 - 379
Target Start/End: Original strand, 19235046 - 19235191
Alignment:
Q  235 aatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctag 333  Q
    |||||||||||| | |||||| ||| |||||| | ||||||||||| ||||| || ||||||||||||||||||| ||||| |||||| |||| ||||||    
T  19235046 aatgttctatcaaataccatatttctatccaaatcattaatctctagatctttctcaatagtttctcttatagtttttctaggtcttcctctatctctag 19235145  T
Q  334 tgattcgattgccctccatctggtctaccctccttactacataatc 379  Q
    ||||| || | ||||||||||| ||||| ||| |||||||| ||||    
T  19235146 tgatttgactcccctccatctgatctactctctttactacagaatc 19235191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 230 - 326
Target Start/End: Complemental strand, 33287646 - 33287549
Alignment:
Q  230 gtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatcta 326  Q
    |||||||||||||||||||||||||| ||||||| |||| |||||| |||| ||| |||||||||||||||||||||||| ||||| |||||| ||||    
T  33287646 gtcataatgttctatcataaaccatatttcgatctaactcattaatttctagatctttcttaatagtttctcttatagtttttctaggtcttcctcta 33287549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 223 - 372
Target Start/End: Complemental strand, 38435184 - 38435034
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||| |||||||||| ||||||||||| | |||||||||||  ||||||||||| ||| |||||||||||||||||| ||||| ||||| |||| |    
T  38435184 aaattacgccataatgttcaatcataaaccaaatttcgatccaacacattaatctctagatctttcttaatagtttctcttgtagtttttctaggtctac 38435085  T
Q  322 atctaactctagtgattcgattgccctccatctggtctaccctccttacta 372  Q
     |||  ||||||||||  || |  ||||||| || ||||| ||||||||||    
T  38435084 ctctgcctctagtgatctgactatcctccatatgatctactctccttacta 38435034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 223 - 361
Target Start/End: Complemental strand, 33504456 - 33504316
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgatt-aatctctatatc-ttcttaatagtttctcttatagttcttctaagtctt 320  Q
    |||||||| ||||||||||||||||| |||||| ||| |||||||| ||| |||||||| ||| |||||||||||||||||||||||| ||||| || ||    
T  33504456 aaattacgccataatgttctatcatataccatatttcaatccaacttattaaatctctagatctttcttaatagtttctcttatagtttttctaggtttt 33504357  T
Q  321 catctaactctagtgattcgattgccctccatctggtctac 361  Q
      |||  ||||||||||  || | ||||||||||| |||||    
T  33504356 tctctgcctctagtgatctgactaccctccatctgatctac 33504316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 232 - 379
Target Start/End: Original strand, 37470192 - 37470340
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatct-tcttaatagtttctcttatagttcttctaagtcttcatctaactc 330  Q
    |||||||||||||||||  ||||| |||||||||||| ||||||||||| |||| || |||||||||||||||||||| ||  | |||||| |||| | |    
T  37470192 cataatgttctatcatatgccatatttcgatccaactcattaatctctagatctgtcctaatagtttctcttatagttttttcaggtcttcctctaccac 37470291  T
Q  331 tagtgattcgattgccctccatctggtctaccctccttactacataatc 379  Q
    |||||||  || | || |||||||  ||||| ||||||| |||||||||    
T  37470292 tagtgatctgactaccttccatctaatctactctccttaatacataatc 37470340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 223 - 299
Target Start/End: Original strand, 19336943 - 19337020
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttct 299  Q
    |||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||| ||| ||||| |||||||||    
T  19336943 aaattacgccataatgttctatcataaaccatatttcgatccaactcattaatctctaaatctttctttatagtttct 19337020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 9496098 - 9496014
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatag 306  Q
    |||||||| |||||||||||||||||||||||| || ||||||||| ||||| ||||| ||| |||| |||||||||||||||||    
T  9496098 aaattacgccataatgttctatcataaaccatatttggatccaactcattaacctctaaatctttctgaatagtttctcttatag 9496014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 223 - 305
Target Start/End: Original strand, 42149710 - 42149793
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttata 305  Q
    |||||||| |||||||||||||||||||||||| ||| ||||| || | ||||||||| ||| |||||||||||||||||||||    
T  42149710 aaattacgccataatgttctatcataaaccatatttctatccagctcaataatctctagatctttcttaatagtttctcttata 42149793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 379
Target Start/End: Original strand, 23714361 - 23714468
Alignment:
Q  270 attaatctctatatcttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctcctta 369  Q
    ||||||||||| |||||  | ||| |||||||||||||| |||||||||||||||||  |||||||||| || | ||| |||| || ||||| |||||||    
T  23714361 attaatctctagatctt--tgataatttctcttatagtttttctaagtcttcatctacgtctagtgatttgactccccaccatttgatctactctcctta 23714458  T
Q  370 ctacataatc 379  Q
    ||||||||||    
T  23714459 ctacataatc 23714468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 379
Target Start/End: Original strand, 24102033 - 24102140
Alignment:
Q  270 attaatctctatatcttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctcctta 369  Q
    ||||||||||| |||||  | ||| |||||||||||||| |||||||||||||||||  |||||||||| || | ||| |||| || ||||| |||||||    
T  24102033 attaatctctagatctt--tgataatttctcttatagtttttctaagtcttcatctacgtctagtgatttgactccccaccatttgatctactctcctta 24102130  T
Q  370 ctacataatc 379  Q
    ||||||||||    
T  24102131 ctacataatc 24102140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 261 - 385
Target Start/End: Complemental strand, 43832292 - 43832167
Alignment:
Q  261 atccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtct 359  Q
    |||||||| ||||||||||| ||| ||||||||||||||||||||||||  | || |||||| |||   |||| ||||| |||| | ||||||||| |||    
T  43832292 atccaactcattaatctctagatccttcttaatagtttctcttatagtttgtttaggtcttcctctgcgtctactgatttgattactctccatctgatct 43832193  T
Q  360 accctccttactacataatcaacatg 385  Q
    || ||||| ||||||||||| |||||    
T  43832192 actctcctaactacataatccacatg 43832167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 168 - 334
Target Start/End: Complemental strand, 26671050 - 26670888
Alignment:
Q  168 caaacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaac 267  Q
    ||||||| ||||||  |||||||||||||  ||||||| |||| | |||||||||| |      ||| || |||||||||||| |||| || | ||||||    
T  26671050 caaacaataaccaagtcttatcccactaagcagtgtcggctacatggatcaaattacac-----cattatattctatcataaatcatattttggtccaac 26670956  T
Q  268 tgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagt 334  Q
    | ||||||||||| ||||| ||||||||||||| |||||||| || || |||||| |||| |||||||    
T  26670955 tcattaatctctaaatctttcttaatagtttcttttatagtttttgtaggtcttcctctacctctagt 26670888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 245 - 379
Target Start/End: Complemental strand, 38860388 - 38860253
Alignment:
Q  245 cataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgatt 343  Q
    ||||||||||| | |||| ||||| || |||||||| ||||| ||||||||||||||||||  || ||| |||||||| |||  ||||||| ||| || |    
T  38860388 cataaaccatattgcgatacaactcatgaatctctagatctttcttaatagtttctcttatcatttttccaagtcttcgtctgcctctagtaatttgact 38860289  T
Q  344 gccctccatctggtctaccctccttactacataatc 379  Q
     ||||||||||  ||||| |||||| ||||||||||    
T  38860288 accctccatctcatctactctccttcctacataatc 38860253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 223 - 328
Target Start/End: Complemental strand, 13149564 - 13149458
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||| |||||||||||||||||| ||| ||| || ||| | ||| ||||| ||||| ||||| | |||||||||||||||||||| | ||||||||||    
T  13149564 aaattatgtcataatgttctatcatcaacgatatttggattctactcattaacctctaaatctttcataatagtttctcttatagttttcctaagtcttc 13149465  T
Q  322 atctaac 328  Q
     ||||||    
T  13149464 ctctaac 13149458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 23915743 - 23915829
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctata-tcttcttaatagtttctcttatagtt 308  Q
    |||||||| |||| ||||||||||||||||||| |||  |||| || ||||||||||| | | ||||||||||||||||||||||||    
T  23915743 aaattacgccatagtgttctatcataaaccatagttctgtccacctcattaatctctagatttttcttaatagtttctcttatagtt 23915829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 232 - 372
Target Start/End: Complemental strand, 12141767 - 12141626
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactc 330  Q
    ||||||||||||||||| |||||| || ||||||| | |||||||||||  || ||| |||||||||||| ||||| | ||||| |||||| |||| |||    
T  12141767 cataatgttctatcatataccatatttggatccaagtcattaatctctaagtctttcctaatagtttctcctatagcttttctaggtcttcctctacctc 12141668  T
Q  331 tagtgattcgattgccctccatctggtctaccctccttacta 372  Q
    | || ||| || |  |||| ||||| ||||| ||||||||||    
T  12141667 ttgtaatttgactatcctcaatctgatctactctccttacta 12141626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 9556430 - 9556518
Alignment:
Q  234 taatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    ||||||||||||||||||||||  | ||||||||| ||||||| ||| ||| ||||||||||||| |||||||||| ||| | ||||||    
T  9556430 taatgttctatcataaaccatatcttgatccaactcattaatcactagatctttcttaatagtttatcttatagtttttcaaggtcttc 9556518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 223 - 374
Target Start/End: Complemental strand, 18959143 - 18958991
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||| | ||||||||||||||||| |||||| || ||||||||| ||||||||| |  || ||| | |||||||||||| ||||| ||||| ||||||    
T  18959143 aaattatgccataatgttctatcatagaccatattttgatccaactcattaatctccaagtctttccttatagtttctcttgtagtttttctaggtcttc 18959044  T
Q  322 atctaactctagtgattcgattgccctccatctggtctaccctccttactaca 374  Q
     |||  ||||  ||||  || |  |||||||||| ||||| ||||||||||||    
T  18959043 ctctgcctctgatgatctgactatcctccatctgatctactctccttactaca 18958991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 321
Target Start/End: Original strand, 37452284 - 37452375
Alignment:
Q  231 tcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    ||||||||||||||||||||||||| |||  ||||||| |||||||||||  || |||||||||| | |||||||| || ||||| ||||||    
T  37452284 tcataatgttctatcataaaccatatttctgtccaactcattaatctctaattctttcttaatagctcctcttataatttttctaggtcttc 37452375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 374
Target Start/End: Original strand, 37481676 - 37481819
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactc 330  Q
    |||||| |||||||| | |||||| ||  |||||||| ||| ||| ||| ||||| ||||||||||||||| |||||| ||||  ||||||||||| |||    
T  37481676 cataattttctatcaaataccatatttttatccaactcatttatcgctagatctttcttaatagtttctctaatagtttttcttggtcttcatctacctc 37481775  T
Q  331 tagtgattcgattgccctccatctggtctaccctccttactaca 374  Q
     ||||||   | | ||||||||||| ||||| ||||| ||||||    
T  37481776 cagtgatctaactcccctccatctgatctactctcctaactaca 37481819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 170 - 331
Target Start/End: Original strand, 45543075 - 45543231
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||| ||| | |||||||||||| | | |||| |||| ||||||||| ||     || |||||||||||||||||||||||| || |||| ||||     
T  45543075 aacaacaagcaagcattatcccactaagtggggtcggctacatagatcaaagta-----cgccataatgttctatcataaaccatatttggatcgaactc 45543169  T
Q  270 attaatctctatatcttct-taatagtttctcttatagttcttctaagtcttcatctaactct 331  Q
    ||| | ||||| ||||| | |||||||||||||||||||| ||| | |||||| |||| ||||    
T  45543170 att-acctctaaatcttttctaatagtttctcttatagtttttccaggtcttcctctacctct 45543231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 299
Target Start/End: Original strand, 33625248 - 33625325
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttct 299  Q
    ||||||| ||||||||||||||||||||||||| | |  ||||||| ||||||||||| ||  |||||||||||||||    
T  33625248 aaattacttcataatgttctatcataaaccatattactttccaactcattaatctctagatatttcttaatagtttct 33625325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 379
Target Start/End: Original strand, 43751997 - 43752154
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||  |||| |||||||||||| |||||  |||| ||||||| |||||| || | ||| ||| ||||||||||||| |||||| ||||| ||||||    
T  43751997 aaattacaacatagtgttctatcatacaccatctttcggtccaactcattaatttccaaatctttcctaatagtttctctgatagtttttctaggtcttc 43752096  T
Q  322 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 379  Q
     | |  ||| ||||||  || |  |||||||||| ||||| |||| ||||||||||||    
T  43752097 ctatgcctccagtgatctgagtatcctccatctgatctactctccctactacataatc 43752154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 223 - 378
Target Start/End: Complemental strand, 26850466 - 26850311
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatct-tcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||| ||||||||| |||||||||||||| |||| ||||||| || ||| |||| || | ||||||||  ||||||||||| | ||||| || ||     
T  26850466 aaattacgccataatgttttatcataaaccatatttcg-tccaactcataaatttctaaatatatcttaataacttctcttatagattttctaggttttt 26850368  T
Q  322 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataat 378  Q
     |||  || |||||||| || |  |||||||||| ||||  ||||||||||||||||    
T  26850367 ctctgcctttagtgatttgactatcctccatctgatctagtctccttactacataat 26850311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 314
Target Start/End: Original strand, 35755247 - 35755391
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaac-- 267  Q
    |||||||||||| |||||||||||||| ||| |||| || | | ||||||||||     || || ||||||||||||||||||||| || ||||||||      
T  35755247 aacaacaaccaagccttatcccactaagtagggtcggctgcatggatcaaatta-----cggcacaatgttctatcataaaccatatttggatccaaccc 35755341  T
Q  268 --tgattaatctctatatc-ttcttaatagtttctcttatagttcttcta 314  Q
      | ||||| ||||| ||| ||| ||||||||||| |||||||| |||||    
T  35755342 attaattaacctctaaatctttcctaatagtttctgttatagtttttcta 35755391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 223 - 286
Target Start/End: Complemental strand, 6219197 - 6219134
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt 286  Q
    |||||||  |||||||||||||||||||||||| |||| ||||||| | ||||||||| |||||    
T  6219197 aaattacaccataatgttctatcataaaccatatttcggtccaactcactaatctctaaatctt 6219134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 170 - 308
Target Start/End: Complemental strand, 12734980 - 12734846
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| |||||||||||||| | | ||||||||| | ||||     |||||||  |||| ||||||||||||||||||| || |||||||||     
T  12734980 aacaacaaccaagccttatcccactaagtggggtcgactacatggatc-----aaattacaccatagtgttctatcataaaccatatttggatccaactc 12734886  T
Q  270 attaatctctatat-cttcttaatagtttctcttatagtt 308  Q
    ||| | ||||| || |||  |||| |||||||| ||||||    
T  12734885 attgacctctaaatcctttctaatggtttctctaatagtt 12734846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 7134853 - 7134939
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagtt 308  Q
    ||||||||| |||||| |||||||||||  |||||||||||||||  |||||| | || ||| |||||| || ||||||||||||||    
T  7134853 aaattacgttataatggtctatcataaattatacttcgatccaacccattaatttttagatctttcttagtactttctcttatagtt 7134939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 379
Target Start/End: Complemental strand, 42543428 - 42543310
Alignment:
Q  262 tccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtcta 360  Q
    ||||||| ||| ||||||| ||| ||| |||||||||||||||||||| ||||| |||| |  ||| ||||||||||  || | |||||||| || ||||    
T  42543428 tccaactcatttatctctagatccttcctaatagtttctcttatagtttttctaggtctacccctacctctagtgatctgactcccctccatttgatcta 42543329  T
Q  361 ccctccttactacataatc 379  Q
    | ||||| |||||| ||||    
T  42543328 ctctcctaactacagaatc 42543310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 379
Target Start/End: Original strand, 44437723 - 44437928
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| |||||||||||||| | | |||| |||| |      |||||||  ||| |||| |||||||||| |||||||  ||   |||||||     
T  44437723 aacaacaaccaagccttatcccactaagtggggtcggctacatg-----aattaaacaacgccatagtgttctatcaaaaaccatgtttttctccaactc 44437817  T
Q  270 attaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctcctt 368  Q
    ||| ||||||| ||| |||||||||||||||| ||||||| ||||| |||| |  ||| ||||||||||  || | ||||||||||  ||||  ||||||    
T  44437818 atttatctctagatccttcttaatagtttctcatatagtttttctaggtctacccctacctctagtgatctgactcccctccatctcatctatactcctt 44437917  T
Q  369 actacataatc 379  Q
    | |||| ||||    
T  44437918 attacagaatc 44437928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 170 - 302
Target Start/End: Original strand, 8197543 - 8197671
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| | |||||||||||| ||| |||| |||| | |||||||  |     || |||||| |||||||||| | |||| ||| ||||||||     
T  8197543 aacaacaaccaagcattatcccactaagtagggtcggctacatggatcaaacga-----cgccataatattctatcatatatcatatttctatccaactc 8197637  T
Q  270 attaatctctatatctt-cttaatagtttctctt 302  Q
    |||||||| || ||||| ||||||||||||||||    
T  8197638 attaatctttagatctttcttaatagtttctctt 8197671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 170 - 302
Target Start/End: Original strand, 8202303 - 8202431
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| | |||||||||||| ||| |||| |||| | |||||||  |     || |||||| |||||||||| | |||| ||| ||||||||     
T  8202303 aacaacaaccaagcattatcccactaagtagggtcggctacatggatcaaacga-----cgccataatattctatcatatatcatatttctatccaactc 8202397  T
Q  270 attaatctctatatctt-cttaatagtttctctt 302  Q
    |||||||| || ||||| ||||||||||||||||    
T  8202398 attaatctttagatctttcttaatagtttctctt 8202431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 230 - 314
Target Start/End: Complemental strand, 21834779 - 21834694
Alignment:
Q  230 gtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttcta 314  Q
    |||||| ||||||||||||||||| | || ||||||||| |||||||| || ||  ||| ||||||||| |||||||||| |||||    
T  21834779 gtcatattgttctatcataaaccaaatttagatccaactcattaatctataaatatttcctaatagtttatcttatagtttttcta 21834694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 223 - 331
Target Start/End: Complemental strand, 31959753 - 31959644
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||| | |||| ||||||||||||||||||| || ||||||||| ||| | ||||| || |||  |||| ||||||||||||||| | ||| ||||||    
T  31959753 aaattatgccatagtgttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatggtttctcttatagttttcctaggtcttc 31959654  T
Q  322 atctaactct 331  Q
      ||||||||    
T  31959653 gcctaactct 31959644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 425
Target Start/End: Complemental strand, 6219025 - 6218981
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctact 425  Q
    ||||| |||||||||||||||||||| |||||| |||||||||||    
T  6219025 acatgtccaaaccacctaagcctattatccactatcttttctact 6218981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 12882095 - 12882179
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatag 306  Q
    |||||||| || |||||||||||| |||||||| || ||||||||| ||||| ||||| ||  ||| || |||||||||||||||    
T  12882095 aaattacgccaaaatgttctatcacaaaccatatttggatccaactcattaacctctaaatatttcctagtagtttctcttatag 12882179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 303
Target Start/End: Complemental strand, 2377275 - 2377204
Alignment:
Q  233 ataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctctta 303  Q
    |||||||||||||||| |||||| || ||||||||| |||| |||||| ||| || |||||||||| |||||    
T  2377275 ataatgttctatcatataccatagttggatccaactcattattctctaaatcttttttaatagtttatctta 2377204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 281
Target Start/End: Original strand, 13474216 - 13474322
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    ||||||||||||  ||||||||||||| | | |||||||   ||||||||||||      | ||||||||  |||||||||||||| | ||||||||||     
T  13474216 aacaacaaccaagtcttatcccactaagtggagtcgactcaatagatcaaattat-----gccataatgtattatcataaaccatattccgatccaactc 13474310  T
Q  270 attaatctctat 281  Q
    ||||||||||||    
T  13474311 attaatctctat 13474322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 447
Target Start/End: Complemental strand, 18958959 - 18958903
Alignment:
Q  387 ccaaaccacctaagcctattttccactgtcttttctactgtctatagctgctaccccaact 447  Q
    ||||||||||||||||||||||||||  |||||||||    |||||| |||||||||||||    
T  18958959 ccaaaccacctaagcctattttccaccatcttttcta----ctataggtgctaccccaact 18958903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 286
Target Start/End: Complemental strand, 36650674 - 36650611
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt 286  Q
    ||||||||| ||| ||||||||||||||| ||| || |||| |||| ||||||||||| |||||    
T  36650674 aaattacgttatagtgttctatcataaactatattttgatctaactcattaatctctagatctt 36650611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 379
Target Start/End: Complemental strand, 42092711 - 42092592
Alignment:
Q  261 atccaactgattaatctctatatcttctt-aatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtct 359  Q
    |||||||| ||||||||||| ||||| || ||||||||||| ||||||| ||||| |||| | | |  || |||||| | || | ||||||||||  |||    
T  42092711 atccaactaattaatctctacatcttttttaatagtttctcctatagtttttctaggtctacctgtctctatagtgaattgactaccctccatctaatct 42092612  T
Q  360 accctccttactacataatc 379  Q
    || |||||||||||| ||||    
T  42092611 actctccttactacaaaatc 42092592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 384 - 447
Target Start/End: Complemental strand, 12141599 - 12141540
Alignment:
Q  384 tgcccaaaccacctaagcctattttccactgtcttttctactgtctatagctgctaccccaact 447  Q
    |||||||||||||||||||| ||||||||  |||||||||    |||||| |||||||||||||    
T  12141599 tgcccaaaccacctaagcctcttttccaccatcttttcta----ctataggtgctaccccaact 12141540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 423
Target Start/End: Original strand, 13240969 - 13241011
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttcta 423  Q
    |||||||||||||||||||||||| |||||||  |||||||||    
T  13240969 acatgcccaaaccacctaagcctagtttccaccatcttttcta 13241011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 314
Target Start/End: Complemental strand, 19024372 - 19024318
Alignment:
Q  261 atccaactgattaatctctatatctt-cttaatagtttctcttatagttcttcta 314  Q
    |||||||| |||||||| || ||||| |||||||||||||||||| |||||||||    
T  19024372 atccaactcattaatctttagatctttcttaatagtttctcttatggttcttcta 19024318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 297
Target Start/End: Complemental strand, 31254511 - 31254445
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagttt 297  Q
    ||||||||||| ||||||| |||| ||| || ||||| ||||||||||| ||| |||||||||||||    
T  31254511 cataatgttctgtcataaatcatatttctattcaactcattaatctctagatctttcttaatagttt 31254445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 286
Target Start/End: Complemental strand, 32402723 - 32402669
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt 286  Q
    ||||||||||||||||| ||| || ||| |||||||| ||||||||||| |||||    
T  32402723 cataatgttctatcatataccttatttctatccaactcattaatctctagatctt 32402669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 383 - 425
Target Start/End: Complemental strand, 38860229 - 38860187
Alignment:
Q  383 atgcccaaaccacctaagcctattttccactgtcttttctact 425  Q
    ||||| ||||||||||||||||||||||||  |||||||||||    
T  38860229 atgcctaaaccacctaagcctattttccacaatcttttctact 38860187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 45077961 - 45077884
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaa--ctgattaatctctatatc-ttcttaatagttt 297  Q
    |||||| | ||| |||||||||||||||| ||| ||||||||||  || ||||||||||| ||| |||||||||||||    
T  45077961 aaattatgccattatgttctatcataaactatatttcgatccaactctcattaatctctaaatctttcttaatagttt 45077884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 307
Target Start/End: Complemental strand, 1626415 - 1626342
Alignment:
Q  235 aatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagt 307  Q
    |||||||||| ||| | |||| ||  || ||||| ||||||||||| ||||| |||||||||||||||||||||    
T  1626415 aatgttctattatatatcatatttttatacaactcattaatctctagatctttcttaatagtttctcttatagt 1626342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 268
Target Start/End: Original strand, 3720465 - 3720510
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaact 268  Q
    |||||||  |||||||||||||||||||||||  ||||||||||||    
T  3720465 aaattacaccataatgttctatcataaaccatttttcgatccaact 3720510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 366
Target Start/End: Original strand, 5759084 - 5759189
Alignment:
Q  262 tccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtcta 360  Q
    ||||||| ||| ||||||| ||| |||||  |||||||||| |||||| ||||| || ||   ||| ||||||||||| |||| ||||||||||| ||||    
T  5759084 tccaactcattgatctctagatccttcttggtagtttctctaatagtttttctaggtatttccctacctctagtgatttgattcccctccatctgatcta 5759183  T
Q  361 ccctcc 366  Q
    | ||||    
T  5759184 ctctcc 5759189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 303
Target Start/End: Complemental strand, 12443188 - 12443135
Alignment:
Q  251 ccatacttcgatccaactgattaatctctatatct-tcttaatagtttctctta 303  Q
    ||||| |||||||||||| ||||||||||| || | ||||||||||||||||||    
T  12443188 ccatatttcgatccaactcattaatctctaaatatatcttaatagtttctctta 12443135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 319
Target Start/End: Complemental strand, 18188972 - 18188887
Alignment:
Q  235 aatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtct 319  Q
    |||||||||| ||  | |||| ||| ||||| || ||||||||||| ||||| || |||||||||||||||| || ||||||||||    
T  18188972 aatgttctattatgtatcatatttctatccagctcattaatctctagatctttctgaatagtttctcttataatttttctaagtct 18188887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 331
Target Start/End: Original strand, 18424427 - 18424536
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||| |||||||| ||||||||||||||||||| |  |||| |||| ||| ||||||| || |||  |||| |||||||| |||||| | ||| ||||||    
T  18424427 aaatgacgtcatagtgttctatcataaaccatattcggatcaaacttattgatctctaaatcctttataatggtttctctaatagttttcctatgtcttc 18424526  T
Q  322 atctaactct 331  Q
     |||| ||||    
T  18424527 ctctacctct 18424536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 311
Target Start/End: Original strand, 9578768 - 9578852
Alignment:
Q  227 tacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagtttctcttatagttctt 311  Q
    |||| |||||| |||||| |||||||||| |  ||||||||| |||||| | || || ||  |||||||||||||||||| ||||    
T  9578768 tacgccataatattctataataaaccatattaggatccaactcattaatttgtaaatttttctaatagtttctcttataggtctt 9578852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 456
Target Start/End: Complemental strand, 11412777 - 11412708
Alignment:
Q  383 atgcccaaaccacctaagcctattttccactgtcttttctactgtctatagctgctaccccaacttcctctcta 456  Q
    |||||||||| |||||||||||||||||||  | |||||||    |||||| |||||||||||||  |||||||    
T  11412777 atgcccaaacaacctaagcctattttccaccatattttcta----ctataggtgctaccccaactctctctcta 11412708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 379
Target Start/End: Original strand, 12026084 - 12026212
Alignment:
Q  252 catacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctcc 350  Q
    |||| ||| ||| |||| ||||||||||| ||||| |||||||||||||| |||||||  |||| ||||| |||   ||| ||||||  || | ||| ||    
T  12026084 catatttctatcaaactcattaatctctagatctttcttaatagtttctcctatagtttctctaggtcttaatccgcctccagtgatgtgactacccacc 12026183  T
Q  351 atctggtctaccctccttactacataatc 379  Q
    ||||| ||||| ||||||| |||| ||||    
T  12026184 atctgatctactctccttagtacaaaatc 12026212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 28960213 - 28960253
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactac 210  Q
    |||||||||||| |||||||||||||||| | |||||||||    
T  28960213 aacaacaaccaagccttatcccactaaatggagtcgactac 28960253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 275
Target Start/End: Complemental strand, 36366868 - 36366816
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaat 275  Q
    |||||||  ||||||||||||| |||||||||| |||| ||||||| ||||||    
T  36366868 aaattacaccataatgttctattataaaccatatttcggtccaactcattaat 36366816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 218 - 313
Target Start/End: Complemental strand, 41545642 - 41545546
Alignment:
Q  218 aaattaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttct-taatagtttctcttatagttcttct 313  Q
    |||| |||||| |||||| ||||||||||||||||||| ||  || ||||| ||  | ||||| ||||| | |||| ||||||||||||||| ||||    
T  41545642 aaatcaaattaagtcatagtgttctatcataaaccatatttgaattcaactcatggacctctacatcttttataatggtttctcttatagtttttct 41545546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 78)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 232 - 372
Target Start/End: Original strand, 3818915 - 3819056
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactc 330  Q
    |||||||||| ||||||||||||| ||| || ||||| ||||||||||| ||||| |||||||||||||||||||||| ||| | |||||| |||  |||    
T  3818915 cataatgttccatcataaaccatatttctattcaactcattaatctctaaatctttcttaatagtttctcttatagtttttcaaggtcttcctctttctc 3819014  T
Q  331 tagtgattcgattgccctccatctggtctaccctccttacta 372  Q
    ||||| || |||| ||||||||||| ||||| ||| ||||||    
T  3819015 tagtggtttgattaccctccatctgatctactctctttacta 3819056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 232 - 373
Target Start/End: Complemental strand, 50806890 - 50806750
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagtttctcttatagttcttctaagtcttcatctaactct 331  Q
    |||| |||| |||||||||||||| ||  |||||||  ||||||||||||  |||||| |||||||||||||| ||| ||||| |||||||||||  |||    
T  50806890 catagtgttttatcataaaccatatttttatccaacgcattaatctctatc-cttcttgatagtttctcttattgtttttctaggtcttcatctacttct 50806792  T
Q  332 agtgattcgattgccctccatctggtctaccctccttactac 373  Q
    ||||||| || | |||||||| || |||||||||||||||||    
T  50806791 agtgatttgactcccctccatttgatctaccctccttactac 50806750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 232 - 379
Target Start/End: Complemental strand, 40416594 - 40416446
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactc 330  Q
    |||||||||||||||||||||||| |||||||||||| |||||||| || ||| ||||||||||||| |||||||||| ||||| |||||| |||  ||     
T  40416594 cataatgttctatcataaaccatatttcgatccaactcattaatctatagatctttcttaatagtttgtcttatagtttttctaggtcttcttctgtctt 40416495  T
Q  331 tagtgattcgattgccctccatctggtctaccctccttactacataatc 379  Q
    | |||||  || |  ||| |||||| ||||| |||||||||||| ||||    
T  40416494 tggtgatctgactatcctgcatctgatctactctccttactacaaaatc 40416446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 170 - 326
Target Start/End: Complemental strand, 41560509 - 41560357
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| |||||||||||||| | | |||| |||| | ||||||||||     || |||||||||||||||||| ||||| || |||||||||     
T  41560509 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatta-----cgccataatgttctatcataacccatatttggatccaactc 41560415  T
Q  270 attaatctctatatct-tcttaatagtttctcttatagttcttctaagtcttcatcta 326  Q
    ||||||||||| || | || |||||||||||||||||| | ||||| |||||| ||||    
T  41560414 attaatctctaaatgtatcctaatagtttctcttatagcttttctaggtcttcttcta 41560357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 170 - 337
Target Start/End: Complemental strand, 8796489 - 8796326
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| |||||||||||||| | | |||| |||| | |||     ||||||||| |||||||||||||||||||||||| ||| |||||| |     
T  8796489 aacaacaaccaagccttatcccactaagtggggtcggctacatggat-----taaattacgccataatgttctatcataaaccatatttcaatccaagtc 8796395  T
Q  270 attaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgat 337  Q
    |||||| |||| ||| ||||||||||||||||||| |||| || |  |||||| |||  ||||||||||    
T  8796394 attaatatctagatctttcttaatagtttctcttaaagtttttattggtcttcctctgcctctagtgat 8796326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 234 - 379
Target Start/End: Complemental strand, 42501329 - 42501183
Alignment:
Q  234 taatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactcta 332  Q
    |||||||||||||||  ||||| ||| |||||||| |||||||| || ||||| ||||||| |||||||||||||| ||||| || ||| |||| |||||    
T  42501329 taatgttctatcatattccatatttctatccaactcattaatctatagatctttcttaataatttctcttatagtttttctaggttttcctctacctcta 42501230  T
Q  333 gtgattcgattgccctccatctggtctaccctccttactacataatc 379  Q
     ||||| || | |||||||||||  |||| |||||| ||||| ||||    
T  42501229 atgatttgactaccctccatctgaactactctcctttctacagaatc 42501183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 223 - 369
Target Start/End: Complemental strand, 6025837 - 6025690
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaa-tagtttctcttatagttcttctaagtcttc 321  Q
    |||| ||| ||| ||||||||||| | |||||| ||| |||||||| ||||||||||| ||||| || | |||| |||||||||||| ||||| ||||||    
T  6025837 aaatgacgccatcatgttctatcagataccatatttctatccaactcattaatctctagatcttttttactagtatctcttatagtttttctaggtcttc 6025738  T
Q  322 atctaactctagtgattcgattgccctccatctggtctaccctcctta 369  Q
     |||  ||||||||||| || | |||| |||||| ||||| |||||||    
T  6025737 ctctgcctctagtgatttgactaccctacatctgatctactctcctta 6025690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 228 - 338
Target Start/End: Original strand, 8342936 - 8343047
Alignment:
Q  228 acgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttc-ttaatagtttctcttatagttcttctaagtcttcatcta 326  Q
    |||||||||||||| |||| | || ||| ||| |||||||| ||||||||||| |||||  ||||| ||||||||||||||| ||||| |||||| ||||    
T  8342936 acgtcataatgttccatcaaatactatatttctatccaactcattaatctctagatctttattaattgtttctcttatagtttttctaggtcttcctcta 8343035  T
Q  327 actctagtgatt 338  Q
     |||||||||||    
T  8343036 tctctagtgatt 8343047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 262 - 379
Target Start/End: Original strand, 50771645 - 50771763
Alignment:
Q  262 tccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtcta 360  Q
    ||||||| |||||||||||  || |||||||||||||| ||||||||| ||||| ||||||  ||| ||||||| ||| || | ||||||||||| ||||    
T  50771645 tccaacttattaatctctaggtccttcttaatagtttcgcttatagtttttctaggtcttcccctacctctagtcatttgactcccctccatctgatcta 50771744  T
Q  361 ccctccttactacataatc 379  Q
    | |||||||||||| ||||    
T  50771745 ctctccttactacaaaatc 50771763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 331
Target Start/End: Original strand, 52561591 - 52561748
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| |||||||||||||| | | |||| |||| | |||||||||      || |||||||||||| |  |||||||| || |||||||||     
T  52561591 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaattt-----cgccataatgttctacccgaaaccatatttggatccaactc 52561685  T
Q  270 attaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactct 331  Q
    ||||| ||||| ||||| | ||| |||||||||||||||| |||||||||||| |||| ||||    
T  52561686 attaacctctaaatctttcctaacagtttctcttatagtttttctaagtcttcctctacctct 52561748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 212 - 331
Target Start/End: Complemental strand, 478920 - 478801
Alignment:
Q  212 tagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttct 310  Q
    |||||||||| |||||| |||||| | ||||||||||| ||||||||| |||||||| ||||| ||||| | ||| | |||||||||||||||||| | |    
T  478920 tagatcaaatcaaattatgtcatagtattctatcataa-ccatacttccatccaactcattaacctctaaaactttcctaatagtttctcttatagattt 478822  T
Q  311 tctaagtcttcatctaactct 331  Q
    | || |||||| |||||||||    
T  478821 tgtaggtcttcctctaactct 478801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 222 - 337
Target Start/End: Original strand, 29577192 - 29577307
Alignment:
Q  222 taaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtctt 320  Q
    ||||||| | |||||||||||||||||| ||||| || |||||| || ||||||||||| ||||| ||||||||||| | || ||||| ||||| |||||    
T  29577192 taaattatgccataatgttctatcataa-ccatattttgatccagctcattaatctctagatctttcttaatagtttatgttgtagtttttctaggtctt 29577290  T
Q  321 catctaactctagtgat 337  Q
    | |||| ||||||||||    
T  29577291 cctctacctctagtgat 29577307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 367
Target Start/End: Complemental strand, 38869105 - 38868969
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactc 330  Q
    ||||||||||||||||| ||||||  || |||||||  ||||||| ||| ||||| ||||||| |||||||||||||| ||||| |||||| |||  |||    
T  38869105 cataatgttctatcatataccatatatctatccaacccattaatcgctagatctttcttaataatttctcttatagtttttctaggtcttcttctgcctc 38869006  T
Q  331 tagtgattcgattgccctccatctggtctaccctcct 367  Q
    || ||||| || | ||||||||||  ||||| |||||    
T  38869005 taatgatttgactaccctccatctaatctactctcct 38868969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 227 - 321
Target Start/End: Original strand, 11941634 - 11941729
Alignment:
Q  227 tacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttct-taatagtttctcttatagttcttctaagtcttc 321  Q
    |||| ||||||||| |||||||||||||||| |||||||||| | ||||||||| ||||| | |||||| ||||||||| ||| ||||| ||||||    
T  11941634 tacgccataatgttttatcataaaccatactccgatccaactcaataatctctaaatcttttctaatagcttctcttattgtttttctaggtcttc 11941729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 232 - 314
Target Start/End: Complemental strand, 29129006 - 29128923
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttcta 314  Q
    |||||||||||||||||||||||| || |||||||||  |||| ||||| ||| ||| |||||||||||||||||||| |||||    
T  29129006 cataatgttctatcataaaccatatttggatccaacttgttaacctctaaatctttcctaatagtttctcttatagtttttcta 29128923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 27520257 - 27520343
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttct-taatagtttctcttatagtt 308  Q
    ||||||| |||||||||||||||||||| |||| || |||||| || ||||||||||| || || | ||||||||||||||||||||    
T  27520257 aaattacatcataatgttctatcataaatcatatttggatccagctcattaatctctaaattttttctaatagtttctcttatagtt 27520343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 223 - 372
Target Start/End: Original strand, 32404576 - 32404726
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||| ||| ||||| |||||||||||||  || |||  |||| ||||||||||| ||||| | |||||||||||||||||||| || || ||||||    
T  32404576 aaattacgccattatgttatatcataaaccatgtttggatttaactcattaatctctaaatctttcctaatagtttctcttatagtttttgtaggtcttc 32404675  T
Q  322 atctaactctagtgattcgattgccctccatctggtctaccctccttacta 372  Q
     |||| |||| |||||  || |  |||||||||  ||||| ||||||||||    
T  32404676 ctctacctcttgtgatatgactatcctccatcttctctactctccttacta 32404726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 43375648 - 43375722
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtt 296  Q
    |||||| |||||||||||||||||| ||||||| |||| ||||||| ||||||||||| ||| ||||||||||||    
T  43375648 aaattatgtcataatgttctatcatgaaccatatttcggtccaactcattaatctctaaatctttcttaatagtt 43375722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 223 - 304
Target Start/End: Original strand, 52532666 - 52532748
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttat 304  Q
    |||||||| |||||||||||||||||||||||| || | ||||||| |||||| |||| ||| ||| ||||||||||||||||    
T  52532666 aaattacgccataatgttctatcataaaccatattttgttccaactcattaatttctaaatctttcctaatagtttctcttat 52532748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 314
Target Start/End: Original strand, 7762482 - 7762579
Alignment:
Q  218 aaattaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttct-taatagtttctcttatagttcttcta 314  Q
    |||| |||||||  ||||||||||||| |||||||||| || ||||||||| |||||  |||| ||||| | |||||||||||||||||||| |||||    
T  7762482 aaatcaaattacaccataatgttctattataaaccatatttagatccaactcattaacatctaaatcttttctaatagtttctcttatagtttttcta 7762579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 220 - 304
Target Start/End: Complemental strand, 51812744 - 51812659
Alignment:
Q  220 attaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttat 304  Q
    ||||||||||| |||||| ||||||||||||||||| ||||||| |||| |||||  |||| ||| ||||||| ||||||||||||    
T  51812744 attaaattacggcataatattctatcataaaccatatttcgatctaactcattaacatctagatctttcttaaaagtttctcttat 51812659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 233 - 308
Target Start/End: Original strand, 990518 - 990594
Alignment:
Q  233 ataatgttctatcataaaccatacttcgatccaactgattaatctctatatct-tcttaatagtttctcttatagtt 308  Q
    |||||||||||||||||||||||  | ||||||||| ||||||||||| |||| ||| |||||||||||| ||||||    
T  990518 ataatgttctatcataaaccatatgttgatccaactcattaatctctagatctatctcaatagtttctctaatagtt 990594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 223 - 372
Target Start/End: Complemental strand, 2544825 - 2544681
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagtttctcttatagttcttctaagtcttca 322  Q
    |||||| | ||||||||||||| |||||||||| |||| ||||||| ||| || || | |||||    ||||||||||| |||||| ||||| ||||||     
T  2544825 aaattatgccataatgttctattataaaccatatttcgctccaactcattgatttccaaatctt----atagtttctctgatagtttttctaggtcttcc 2544730  T
Q  323 tctaactctagtgattcgattgccctccatctggtctaccctccttacta 372  Q
    |||| |||||||| || || |  |||||||||| ||||| ||||||||||    
T  2544729 tctacctctagtg-tttgactatcctccatctgatctactctccttacta 2544681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 248 - 379
Target Start/End: Complemental strand, 43423926 - 43423794
Alignment:
Q  248 aaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgcc 346  Q
    |||||||| ||| |||||||| | ||||||||| ||||| |||||| || |||||| || || ||||| |||||| |||| ||||||||||| || | |     
T  43423926 aaaccatatttctatccaactcactaatctctagatctttcttaatggtctctcttgtaatttttctaggtcttcctctacctctagtgatttgactact 43423827  T
Q  347 ctccatctggtctaccctccttactacataatc 379  Q
     ||||||| |||||| || ||||||||||||||    
T  43423826 atccatctagtctactctacttactacataatc 43423794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 34444636 - 34444530
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| |||||||||||||| | | |||| |||| |||||||||||| |      ||||||||| ||| |||||||||| || |||||||||     
T  34444636 aacaacaaccaagccttatcccactaagtggggtcggctacatagatcaaattacac-----cataatgttttattataaaccatatttggatccaactc 34444542  T
Q  270 attaatctctat 281  Q
    ||||||||||||    
T  34444541 attaatctctat 34444530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 233 - 379
Target Start/End: Original strand, 10569131 - 10569274
Alignment:
Q  233 ataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactct 331  Q
    |||||||||||||||| || ||| ||| ||||| || ||||||||||| ||| ||||||||||||||| ||||  || ||    || ||| |||  ||||    
T  10569131 ataatgttctatcatatacgatatttctatccagcttattaatctctagatctttcttaatagtttcttttatttttttt----gtgttcctctgcctct 10569226  T
Q  332 agtgattcgattgccctccatctggtctaccctccttactacataatc 379  Q
    ||||||| |||| ||||||||||  |||||||||| ||||||| ||||    
T  10569227 agtgatttgattaccctccatctaatctaccctccgtactacagaatc 10569274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 16142030 - 16142116
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttct-taatagtttctcttatagtt 308  Q
    ||||||||||||| ||||| ||||||||||||| || |||| |||| ||||| ||||| ||||| | |||| |||||||||||||||    
T  16142030 aaattacgtcatattgttcgatcataaaccataattggatctaacttattaaactctaaatcttttctaatggtttctcttatagtt 16142116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 230 - 379
Target Start/End: Original strand, 33560915 - 33561065
Alignment:
Q  230 gtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaac 328  Q
    ||||||||||||| | ||| |||||| ||  ||||||||   ||||||||| ||||| |||||||||||| |||| |||| ||||| | |||| |||  |    
T  33560915 gtcataatgttctctgatataccatatttatatccaactcgctaatctctagatcttacttaatagtttcccttacagtttttctaggacttcctctgcc 33561014  T
Q  329 tctagtgattcgattgccctccatctggtctaccctccttactacataatc 379  Q
    |||||||||| || | |||||||||   ||||| |||||||||||| ||||    
T  33561015 tctagtgatttgactaccctccatcatatctactctccttactacagaatc 33561065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 165 - 447
Target Start/End: Original strand, 37462873 - 37463159
Alignment:
Q  165 aaacaaacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatcc 264  Q
    ||||||||||||||||| |||||||||||||| | | |||| |||| | ||||||||||     || ||||||||||||| |||||||||| || ||||     
T  37462873 aaacaaacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatta-----cgccataatgttctatgataaaccatattt-gatca 37462966  T
Q  265 aactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagt-gattcgattgccctccatctggtctacc 362  Q
    |||| ||||| ||||| ||| ||| | || ||||||||||||||| ||||| ||  || |||| ||||  | ||| ||| |  |||||||||| |||||     
T  37462967 aactcattaacctctaaatcattcctgatcgtttctcttatagtttttctaggtaatcctctacctctttttgatccgactctcctccatctgatctact 37463066  T
Q  363 ctccttactacataatcaacatg------------cccaaaccacctaagcctattttccactgtcttttctactgtctatagctgctaccccaact 447  Q
    || | ||||||   ||| |||||            |||||||||||||||||||||||| |||||||||||||    |||||| |||||||||||||    
T  37463067 cttcgtactacggcatctacatgtctactctatagcccaaaccacctaagcctattttctactgtcttttcta----ctataggtgctaccccaact 37463159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 280
Target Start/End: Complemental strand, 6084207 - 6084150
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctcta 280  Q
    |||||||| |||| ||||||||||||||||||| || ||||||||| |||||||||||    
T  6084207 aaattacgccatattgttctatcataaaccatattttgatccaactcattaatctcta 6084150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 331
Target Start/End: Original strand, 9599444 - 9599553
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||| ||||| ||||||||||||||||||  | |||| |||| ||||| ||||| ||  ||| |||||||||||||| ||||| ||||| ||||||    
T  9599444 aaattacgccataacgttctatcataaaccatatctggatcaaactcattaaactctaaatatttcctaatagtttctcttgtagtttttctaggtcttc 9599543  T
Q  322 atctaactct 331  Q
     |||| ||||    
T  9599544 ctctacctct 9599553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 233 - 337
Target Start/End: Complemental strand, 15577640 - 15577535
Alignment:
Q  233 ataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttcatctaactct 331  Q
    |||||||||||||| | | ||||  || |||||||| |||||||||||||| |||||||||||||||||||||  || || ||  ||||| |||| ||||    
T  15577640 ataatgttctatcaaatatcatatctctatccaactcattaatctctatatccttcttaatagtttctcttattatttttttagatcttcctctacctct 15577541  T
Q  332 agtgat 337  Q
    ||||||    
T  15577540 agtgat 15577535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 331
Target Start/End: Complemental strand, 39318361 - 39318252
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||| |||| ||||||||||||||||||| || ||||||||| ||| | ||||| || |||  |||| ||||||||||||||| | ||| ||||||    
T  39318361 aaattacgccatagtgttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatggtttctcttatagttttcctaggtcttc 39318262  T
Q  322 atctaactct 331  Q
     |||| ||||    
T  39318261 ctctacctct 39318252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 280
Target Start/End: Original strand, 13827635 - 13827687
Alignment:
Q  228 acgtcataatgttctatcataaaccatacttcgatccaactgattaatctcta 280  Q
    ||||||||||||||||||||| |||||| ||| |||||||| |||||||||||    
T  13827635 acgtcataatgttctatcatataccatatttctatccaactcattaatctcta 13827687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 283 - 379
Target Start/End: Complemental strand, 43898400 - 43898304
Alignment:
Q  283 tcttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 379  Q
    |||||| ||||||||||||||||||| ||| | |||||   ||| || | |||||| || | ||||||||||| ||||| |||||||||||||||||    
T  43898400 tcttctaaatagtttctcttatagtttttccaggtctttccctacctttggtgatttgactcccctccatctgatctactctccttactacataatc 43898304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 381 - 425
Target Start/End: Original strand, 48431630 - 48431674
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctact 425  Q
    ||||||||||||||||||||||||||||||||  |||||||||||    
T  48431630 acatgcccaaaccacctaagcctattttccaccatcttttctact 48431674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 223 - 286
Target Start/End: Complemental strand, 5338945 - 5338882
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt 286  Q
    |||||||| ||||||||||||| ||||| || | |||||||||||| ||||||||||| |||||    
T  5338945 aaattacgccataatgttctataataaatcacatttcgatccaactcattaatctctagatctt 5338882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 232 - 326
Target Start/End: Original strand, 8203193 - 8203288
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttctt-aatagtttctcttatagttcttctaagtcttcatcta 326  Q
    |||||||||||||| |  | ||||| ||  ||||||| ||||||||||| ||||| || ||||||||||||||||||| ||||| |||||| ||||    
T  8203193 cataatgttctatcttctatcatacctccgtccaactcattaatctctagatcttttttaatagtttctcttatagtttttctaggtcttcttcta 8203288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 223 - 337
Target Start/End: Original strand, 36339854 - 36339968
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttc 321  Q
    ||||||| |||||||||| |||||| ||||||  |||  ||||||| |||||| || | ||||| | ||||||||||||| |||||| ||||| ||||||    
T  36339854 aaattacttcataatgttttatcattaaccatgtttctgtccaactcattaatttcaa-atctttcctaatagtttctctgatagtttttctaggtcttc 36339952  T
Q  322 atctaactctagtgat 337  Q
     |||| ||||||||||    
T  36339953 ctctacctctagtgat 36339968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 223 - 278
Target Start/End: Original strand, 39776945 - 39777000
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctc 278  Q
    |||||||| |||  ||||||||||||||||||| |||||||||||| |||||||||    
T  39776945 aaattacgccattgtgttctatcataaaccatatttcgatccaactcattaatctc 39777000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 379
Target Start/End: Original strand, 12261802 - 12261920
Alignment:
Q  262 tccaactgattaatctcta-tatcttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtcta 360  Q
    ||||||| ||||||| ||| | |||||||| ||||||||||||||||| ||||| |||||   | | ||||||||||| || |  |||||||| | ||||    
T  12261802 tccaactaattaatccctaatttcttcttactagtttctcttatagtttttctaggtcttaccccacctctagtgatttgactctcctccatcagatcta 12261901  T
Q  361 ccctccttactacataatc 379  Q
    ||||| |||||||| ||||    
T  12261902 ccctcattactacaaaatc 12261920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 381 - 423
Target Start/End: Original strand, 14226053 - 14226095
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttcta 423  Q
    ||||||||||||||||||||||||||||||||  |||||||||    
T  14226053 acatgcccaaaccacctaagcctattttccaccatcttttcta 14226095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 379
Target Start/End: Complemental strand, 28528548 - 28528430
Alignment:
Q  262 tccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtcta 360  Q
    ||||||| ||||||||||| ||| ||||||||||||||| |||||||| || || ||||||  |||  ||||| |||| || | |||||||| || ||||    
T  28528548 tccaactcattaatctctagatccttcttaatagtttctgttatagtttttttaggtcttcccctacttctagggatttgactcccctccatttgatcta 28528449  T
Q  361 ccctccttactacataatc 379  Q
    |  ||||||||||| ||||    
T  28528448 ctgtccttactacagaatc 28528430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 232 - 317
Target Start/End: Original strand, 39515927 - 39516013
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctcta-tatcttcttaatagtttctcttatagttcttctaagt 317  Q
    |||||||||||| ||||| ||||| || ||||||||| |||||| ||||   | |||||||||||||||| ||||||| ||||||||    
T  39515927 cataatgttctaccataatccatattttgatccaactcattaatttctaggtttttcttaatagtttctcgtatagtttttctaagt 39516013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 170 - 279
Target Start/End: Original strand, 25715328 - 25715432
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| |||||||||||||| |   |||| |||| | ||||||||||     || |||||| ||||||||||||||||| |||| | |||||     
T  25715328 aacaacaaccaagccttatcccactaagtgaggtcggctacatggatcaaatta-----cgccataatattctatcataaaccatatttcggttcaactc 25715422  T
Q  270 attaatctct 279  Q
    ||||||||||    
T  25715423 attaatctct 25715432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 261 - 369
Target Start/End: Original strand, 30834065 - 30834174
Alignment:
Q  261 atccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtct 359  Q
    |||||||| ||||||||||| ||||| | |||||||||||||||||| | ||||| |||||| |||  |||||  |||| || | || |||||||| |||    
T  30834065 atccaactcattaatctctagatctttcgtaatagtttctcttatagcttttctaggtcttcctctccctctatcgatttgactaccttccatctgatct 30834164  T
Q  360 accctcctta 369  Q
    || |||||||    
T  30834165 actctcctta 30834174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 241 - 352
Target Start/End: Complemental strand, 7922050 - 7921940
Alignment:
Q  241 ctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattc 339  Q
    |||||||| |||||||| | |||||||| ||||||||||| ||| || ||| |||||||| |||||||| ||  | ||||||||||| |||||||||||     
T  7922050 ctatcatataccatact-ctatccaactcattaatctctagatcgtttttactagtttcttttatagtt-ttgaaggtcttcatctacctctagtgattt 7921953  T
Q  340 gattgccctccat 352  Q
     |||| |||||||    
T  7921952 aattgtcctccat 7921940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 331
Target Start/End: Complemental strand, 9509549 - 9509441
Alignment:
Q  224 aattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttca 322  Q
    ||||||| |||||||||| ||||||||||||| || | || |||| ||||  || || ||| ||| ||||||||| |||||||||| ||||| ||||||     
T  9509549 aattacgccataatgttcaatcataaaccatatttggctctaactcattaggctgtaaatctttcctaatagtttatcttatagtttttctaggtcttcc 9509450  T
Q  323 tctaactct 331  Q
    |||| ||||    
T  9509449 tctacctct 9509441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 314
Target Start/End: Original strand, 11331254 - 11331346
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttct-taatagtttctcttatagttcttcta 314  Q
    ||||||| ||||||||||  ||||||||||||| ||  |||||||| ||||| ||||| ||||| |  |||||||||||||||| || |||||    
T  11331254 aaattacatcataatgtttcatcataaaccatatttaaatccaacttattaacctctaaatcttttcaaatagtttctcttatactttttcta 11331346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 314
Target Start/End: Original strand, 11489275 - 11489367
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttct-taatagtttctcttatagttcttcta 314  Q
    ||||||| ||||||||||  ||||||||||||| ||  |||||||| ||||| ||||| ||||| |  |||||||||||||||| || |||||    
T  11489275 aaattacatcataatgtttcatcataaaccatatttaaatccaacttattaacctctaaatcttttcaaatagtttctcttatactttttcta 11489367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 321
Target Start/End: Original strand, 19969301 - 19969361
Alignment:
Q  262 tccaactgattaatctctatatcttc-ttaatagtttctcttatagttcttctaagtcttc 321  Q
    ||||||| ||||||||||| |||||  ||||||||||||||||||||| ||||| ||||||    
T  19969301 tccaactcattaatctctagatctttgttaatagtttctcttatagtttttctaggtcttc 19969361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 370
Target Start/End: Complemental strand, 37263523 - 37263415
Alignment:
Q  262 tccaactgattaatctctatatcttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctac 361  Q
    ||||||| ||| ||||||| |||||||| |||||||| || |||||  ||||| ||||||  ||| ||||||||||| ||   ||||||||||| | |||    
T  37263523 tccaactcattgatctctagatcttcttgatagtttcactaatagtatttctaggtcttcccctacctctagtgatttgacacccctccatctgatttac 37263424  T
Q  362 cctccttac 370  Q
     ||||||||    
T  37263423 tctccttac 37263415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 338
Target Start/End: Complemental strand, 51584912 - 51584860
Alignment:
Q  286 tcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgatt 338  Q
    ||||||||||||||||||||||| ||||| ||||||  ||| |||||||||||    
T  51584912 tcttaatagtttctcttatagtttttctaggtcttcccctacctctagtgatt 51584860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 379
Target Start/End: Original strand, 853873 - 853992
Alignment:
Q  261 atccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtct 359  Q
    |||||||| | ||||||||| ||| |||||||||||||||| ||||| | || || |||||| |||  ||||||||||| || |   || ||||||||      
T  853873 atccaactcactaatctctagatccttcttaatagtttctcgtatagattttttaggtcttcctctgcctctagtgatttgactaatcttcatctggtaa 853972  T
Q  360 accctccttactacataatc 379  Q
    || |||||||||||||||||    
T  853973 actctccttactacataatc 853992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 312
Target Start/End: Complemental strand, 1661648 - 1661561
Alignment:
Q  226 ttacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttc 312  Q
    ||||| || |||||||||||| |||||| | |||| |||||||  ||||| |||| ||| ||| |||||||||||||||||| |||||    
T  1661648 ttacgccaaaatgttctatcacaaaccacatttcggtccaactcgttaatttctaaatctttcctaatagtttctcttataggtcttc 1661561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 305
Target Start/End: Original strand, 12930361 - 12930444
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctata-tcttcttaatagtttctcttata 305  Q
    ||||||||||||||| |||||||||||| |||| || ||||||||| | |||||| || | | ||| ||||| |||||||||||    
T  12930361 aaattacgtcataatcttctatcataaatcatatttggatccaactcactaatctttaaatttttcataataatttctcttata 12930444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 331
Target Start/End: Original strand, 18469132 - 18469241
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctct--atatcttcttaatagtttctcttatagttcttctaagtctt 320  Q
    |||||||  |||||||||| ||||||||| ||| ||  |||||||| ||| | ||||  |||| ||| ||| ||||||||||||| || |||||||||||    
T  18469132 aaattacaccataatgttcgatcataaactatatttgtatccaactcattgacctcttaatat-ttcctaaaagtttctcttataatttttctaagtctt 18469230  T
Q  321 catctaactct 331  Q
    |||||| ||||    
T  18469231 catctacctct 18469241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 286
Target Start/End: Original strand, 27072537 - 27072600
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt 286  Q
    |||||||| |||||||||||||||||||||||| |||  |||||||  ||||| |||| |||||    
T  27072537 aaattacgccataatgttctatcataaaccatatttctgtccaactctttaatttctaaatctt 27072600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 265
Target Start/End: Original strand, 28090696 - 28090786
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatcca 265  Q
    ||||||||||||  ||||||||||||| | | |||| |||| | ||||||||||     || |||||||||||||||||||||||| || ||||||    
T  28090696 aacaacaaccaagtcttatcccactaagtggggtcggctacatggatcaaatta-----cgccataatgttctatcataaaccatatttggatcca 28090786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 278
Target Start/End: Original strand, 28511851 - 28511906
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctc 278  Q
    |||||||| |||||||||||||||||||||||  || | ||||||| |||||||||    
T  28511851 aaattacgccataatgttctatcataaaccatgttttggtccaactcattaatctc 28511906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 308
Target Start/End: Original strand, 38807673 - 38807807
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| |||||||||||||| | | |||| |||| | || |||||||     || |||| ||||||||||||||||||| || |||||||||     
T  38807673 aacaacaaccaagccttatcccactaagtggggtcggctacatggaacaaatta-----cgccatagtgttctatcataaaccatatttggatccaactc 38807767  T
Q  270 attaatctctatat-cttcttaatagtttctcttatagtt 308  Q
     || | ||||| || |||  |||| |||||||||||||||    
T  38807768 gttgacctctaaatcctttctaatggtttctcttatagtt 38807807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 280
Target Start/End: Original strand, 4707223 - 4707327
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| |||||||||||||| | | |||| |||| | ||||||||||     || |||| ||||||||||||||||| | || |||||||||     
T  4707223 aacaacaaccaagccttatcccactaagtggggtcggctacat-gatcaaatta-----cgccatagtgttctatcataaaccaaatttggatccaactc 4707316  T
Q  270 attaatctcta 280  Q
    ||||| |||||    
T  4707317 attaacctcta 4707327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 338
Target Start/End: Complemental strand, 12231559 - 12231481
Alignment:
Q  261 atccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgatt 338  Q
    |||||||| ||||||||| | ||||| ||||||||| |||||||||||| |||||||| ||| || | || ||||||||    
T  12231559 atccaactcattaatctcgagatctttcttaatagtctctcttatagtttttctaagtattcctccacctttagtgatt 12231481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 300
Target Start/End: Complemental strand, 39140747 - 39140669
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctata-tcttcttaatagtttctc 300  Q
    |||||||| ||||||||||||||  |||||||| || ||||||||| ||||| ||||| | | ||| ||||||||||||    
T  39140747 aaattacgccataatgttctatctgaaaccatatttggatccaactaattaacctctaaatttttcctaatagtttctc 39140669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 286
Target Start/End: Original strand, 40920588 - 40920642
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt 286  Q
    |||||| |||||||||| |||||| ||| |||||||| ||||||||||| |||||    
T  40920588 cataatattctatcatataccatatttctatccaactcattaatctctagatctt 40920642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 292 - 374
Target Start/End: Original strand, 52160356 - 52160438
Alignment:
Q  292 tagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctccttactaca 374  Q
    ||||||||||||||||| ||||  |||||||| |  ||||||||||| || | |||||||||| |||||| ||  ||||||||    
T  52160356 tagtttctcttatagtttttctctgtcttcatatgcctctagtgatttgactaccctccatctagtctactcttgttactaca 52160438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 52900692 - 52900754
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatct 285  Q
    ||||| || |||| ||||||||||||||||||| |||  ||||||| ||||||||||| ||||    
T  52900692 aaattccgccatagtgttctatcataaaccatatttcagtccaactcattaatctctaaatct 52900754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 8676942 - 8676999
Alignment:
Q  250 accatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatag 306  Q
    |||||| |||| ||||||| ||||||||||| ||| || |||||||||||||||||||    
T  8676942 accatatttcggtccaactcattaatctctaaatcttttttaatagtttctcttatag 8676999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 307
Target Start/End: Original strand, 10200356 - 10200441
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttct-taatagtttctcttatagt 307  Q
    |||||||  ||| |||||||||||||||||||| || ||||||||| ||  ||||||| ||||| | ||||||| ||||| |||||    
T  10200356 aaattacaccatgatgttctatcataaaccatatttggatccaactcatcgatctctaaatcttttctaatagtctctctcatagt 10200441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 373
Target Start/End: Complemental strand, 10272428 - 10272339
Alignment:
Q  284 cttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctccttactac 373  Q
    ||||||||||||||||||||||  | ||||| ||||||  ||| ||||||||||| || | || |||||||| ||| | |||||| ||||    
T  10272428 cttcttaatagtttctcttataagttttctaggtcttcccctacctctagtgatttgactcccatccatctgatctcctctccttcctac 10272339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 314
Target Start/End: Original strand, 16272878 - 16272963
Alignment:
Q  230 gtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttcta 314  Q
    |||||| ||||||||||||||||||| || ||| | ||| |||||||| || ||  ||| ||||| ||||||| ||||||||||||    
T  16272878 gtcatattgttctatcataaaccataattagatactactcattaatctataaatatttcataataatttctctaatagttcttcta 16272963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 280
Target Start/End: Original strand, 19908085 - 19908142
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctcta 280  Q
    ||||||||  ||||||||| ||||||||||||| ||  |||||||| |||||||||||    
T  19908085 aaattacgcaataatgttcaatcataaaccatatttgaatccaactcattaatctcta 19908142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 361
Target Start/End: Original strand, 52442640 - 52442717
Alignment:
Q  284 cttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctac 361  Q
    |||||| ||||||||||||||| || ||||| |||||| |||| |||||| |||| || | || |||||||| |||||    
T  52442640 cttcttgatagtttctcttatatttgttctaggtcttcctctacctctagagatttgactcccttccatctgatctac 52442717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 236 - 331
Target Start/End: Complemental strand, 8628249 - 8628153
Alignment:
Q  236 atgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactct 331  Q
    |||||||||| ||||| ||| || |||| || | ||||| ||||| ||||| | ||||||||||| |||||||| ||||| |||||| |||| ||||    
T  8628249 atgttctatcgtaaactatattttgatcaaattcattaacctctaaatctttcctaatagtttctgttatagtttttctaggtcttcctctacctct 8628153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 287
Target Start/End: Original strand, 15438859 - 15438907
Alignment:
Q  239 ttctatcataaaccatacttcgatccaactgattaatctctatatcttc 287  Q
    ||||||||||||||||| || |||| |||| ||||||||||| ||||||    
T  15438859 ttctatcataaaccatattttgatctaactcattaatctctaaatcttc 15438907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 19822120 - 19822088
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccata 255  Q
    |||||||||| ||||||||||||||||||||||    
T  19822120 aaattacgtcgtaatgttctatcataaaccata 19822088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 255
Target Start/End: Complemental strand, 39896799 - 39896763
Alignment:
Q  219 aattaaattacgtcataatgttctatcataaaccata 255  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  39896799 aattaaattacgccataatgttatatcataaaccata 39896763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 425
Target Start/End: Original strand, 44905556 - 44905600
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctact 425  Q
    ||||| ||||||||||||||| ||||||| || ||||||||||||    
T  44905556 acatgtccaaaccacctaagcatattttctaccgtcttttctact 44905600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 224 - 321
Target Start/End: Original strand, 40116519 - 40116617
Alignment:
Q  224 aattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatct-tcttaatagtttctcttatagttcttctaagtcttc 321  Q
    ||||||| || ||||||||||||||||||||| |||| ||||||| ||||||||||| |||| || |||||||||||||||||||| ||||| ||||||    
T  40116519 aattacgccacaatgttctatcataaaccatatttcggtccaactcattaatctctaaatctatcctaatagtttctcttatagtttttctaggtcttc 40116617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 223 - 331
Target Start/End: Original strand, 39600731 - 39600840
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||  |||||||||||||| ||||||| | || ||||||||| ||||| ||||| ||||| |||||||||||||||||||||| ||||| ||||||    
T  39600731 aaattacaccataatgttctatcgtaaaccagatttggatccaactcattaacctctaaatctttcttaatagtttctcttatagtttttctaggtcttc 39600830  T
Q  322 atctaactct 331  Q
     |||| ||||    
T  39600831 ctctacctct 39600840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 233 - 308
Target Start/End: Original strand, 45289151 - 45289227
Alignment:
Q  233 ataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagtt 308  Q
    ||||||||||||||||||||||| || ||||||||| ||||||||||| ||| ||| ||||||||||||||||||||    
T  45289151 ataatgttctatcataaaccatatttggatccaactcattaatctctaaatctttcctaatagtttctcttatagtt 45289227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 234 - 374
Target Start/End: Complemental strand, 38431069 - 38430928
Alignment:
Q  234 taatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactcta 332  Q
    |||||||||||||||||||||| || ||||||||| ||||| ||||| | ||| |  ||||||||||||| ||||| |||||||||||| |||| ||||     
T  38431069 taatgttctatcataaaccatatttggatccaactcattaacctctaaaccttccacaatagtttctcttgtagtttttctaagtcttcctctacctctt 38430970  T
Q  333 gtgattcgattgccctccatctggtctaccctccttactaca 374  Q
     ||||| || |  |||||||||| ||||| || | |||||||    
T  38430969 ttgatttgactctcctccatctgatctactcttcatactaca 38430928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 36304198 - 36304123
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagttt 297  Q
    |||||||| |||||||| ||||||||||||||| || ||||||||| ||||||||||| ||| |||||||||||||    
T  36304198 aaattacgccataatgtcctatcataaaccatattttgatccaactcattaatctctagatctttcttaatagttt 36304123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 223 - 285
Target Start/End: Original strand, 40116388 - 40116450
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatct 285  Q
    |||||||| |||||||||||||||||||||||| |||| ||||||| ||||||||||| ||||    
T  40116388 aaattacgccataatgttctatcataaaccatatttcggtccaactcattaatctctaaatct 40116450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 223 - 304
Target Start/End: Complemental strand, 49841848 - 49841766
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttat 304  Q
    |||||| | ||||||||||||||||| |||||| |||||||||||| |||||||| || ||| || |||||||||||||||||    
T  49841848 aaattatgccataatgttctatcatataccatatttcgatccaactcattaatctttagatctttgttaatagtttctcttat 49841766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 223 - 379
Target Start/End: Original strand, 42026586 - 42026743
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||| ||| ||||||||||||||||| |||||| ||| ||| |||| ||||||| |||||||  ||||||||||||||||||||| | |  |  ||||||    
T  42026586 aaataacgccataatgttctatcatataccatatttctatctaactcattaatccctatatcaatcttaatagtttctcttatagctttgattggtcttc 42026685  T
Q  322 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 379  Q
     |||  |||||| |||  ||||  ||||| |||| ||||| |||||||||| ||||||    
T  42026686 ctctgcctctagggatgtgattatcctccgtctgatctactctccttactaaataatc 42026743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 223 - 337
Target Start/End: Complemental strand, 29475918 - 29475805
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||| |||| | ||||||||||||| ||| ||| |||||||| ||||||||||| ||| ||||||||||||  |||||||| | ||||| ||||||    
T  29475918 aaattacgccatagttttctatcataaacaatatttcaatccaactcattaatctctagatctttcttaatagtt--tcttatagcttttctaggtcttc 29475821  T
Q  322 atctaactctagtgat 337  Q
     |||  ||||||||||    
T  29475820 ctctgcctctagtgat 29475805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 170 - 274
Target Start/End: Original strand, 40106622 - 40106721
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| |||||||||||||| | | ||| ||||| | ||||||||||      |||||||||||||||||||||||||| || |||||||||     
T  40106622 aacaacaaccaagccttatcccactaagtggggtccactacattgatcaaattat-----gtcataatgttctatcataaaccatatttggatccaactc 40106716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 223 - 425
Target Start/End: Original strand, 42510066 - 42510282
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||| |||||||||| ||||||||||||| || | ||||||| ||| || || | ||| ||| |||| |||||||| |||||| ||||| ||||||    
T  42510066 aaattacgccataatgttcaatcataaaccatattttggtccaactcatttatttccaaatctttcctaatggtttctctgatagtttttctaggtcttc 42510165  T
Q  322 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataa-------------tcaacatgcccaaaccacctaagcctatttt 408  Q
     | |  ||||||||||  || |  |||||||||| ||||| |||||||| ||| ||             || ||||| ||||||||||||||||||||||    
T  42510166 ctttgcctctagtgatctgactatcctccatctgatctactctccttaccacaaaatctataggtcttctctacatgtccaaaccacctaagcctatttt 42510265  T
Q  409 ccactgtcttttctact 425  Q
    ||||| |||||||||||    
T  42510266 ccactatcttttctact 42510282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 377
Target Start/End: Original strand, 23534620 - 23534775
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||| ||||||||||||||||||| |||| | |  ||||||| |||||||||||  || ||| ||||||||||| ||||| || || |  ||||||    
T  23534620 aaattacgccataatgttctatcataaatcatattacagtccaactcattaatctctaagtctttcctaatagtttctgttataatttttttgggtcttc 23534719  T
Q  322 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataa 377  Q
     |||| ||||||||||   | |  | |||||||| ||||| |||||||||||||||    
T  23534720 ctctacctctagtgatctaactatcatccatctgatctactctccttactacataa 23534775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 308
Target Start/End: Complemental strand, 49042169 - 49042082
Alignment:
Q  223 aaattacgtcataatgttctatcataaa-ccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagtt 308  Q
    |||||||| |||| |||||||||||||| ||||| || ||||||||| ||||| ||||| ||||| | ||||||||||||||||||||    
T  49042169 aaattacgccatagtgttctatcataaaaccatatttggatccaactcattaacctctaaatctttcctaatagtttctcttatagtt 49042082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 170 - 331
Target Start/End: Complemental strand, 54128659 - 54128501
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| |||||||||||||| | | |||| |||| | ||||||||||      | |||||||||||||||||||||||| || | |||||||     
T  54128659 aacaacaaccaagccttatcccactaagtggggtcgcctacatggatcaaattat-----gccataatgttctatcataaaccatatttgggtccaactc 54128565  T
Q  270 attaatctctatatc-ttcttaatagtttctctt-atagttcttctaagtcttcatctaactct 331  Q
    ||| | ||||| ||| ||| | |||||||||||| |||||| ||||| |||||| |||| ||||    
T  54128564 attgacctctaaatctttccttatagtttctcttaatagtttttctaggtcttcctctacctct 54128501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 321
Target Start/End: Original strand, 54365025 - 54365124
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    ||||||||||||| ||||||||||||||||||| || | || |||  ||||||||| |  || ||| |||||||||||||||||||| ||||| ||||||    
T  54365025 aaattacgtcatagtgttctatcataaaccatattttggtctaacacattaatctccaagtctttcctaatagtttctcttatagtttttctaggtcttc 54365124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 170 - 280
Target Start/End: Original strand, 30797824 - 30797929
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| |||||| ||||||| | | ||||  ||| ||||||     ||||||||||||||||||||||||||||| | | || ||||||||||    
T  30797824 aacaacaaccaagccttattccactaagtggggtcggttacatagatc-----aaattacgtcataatgttctatcataaactaaatttggatccaactg 30797918  T
Q  270 attaatctcta 280  Q
    | |||||||||    
T  30797919 aataatctcta 30797929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 170 - 331
Target Start/End: Complemental strand, 48508515 - 48508358
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| |||||||||||||| | | |||| |||| | ||||||||||     || |||| ||||||||||||||||||| ||  ||||||||     
T  48508515 aacaacaaccaagccttatcccactaagtggggtcggctacatggatcaaatta-----cgccatagtgttctatcataaaccatatttgaatccaactc 48508421  T
Q  270 attaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttcatctaactct 331  Q
    ||| | ||||| || |||  |||| ||||||||||||||| | ||| |||||| |||| ||||    
T  48508420 attgacctctaaatcctttctaatggtttctcttatagttttcctaggtcttcctctacctct 48508358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 379
Target Start/End: Original strand, 37598220 - 37598376
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatct-tcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||| ||| ||||||||||||||||| | |||||  | |||||||| ||||||||||| || | |||||||||||||||||| |||| ||||| ||| ||    
T  37598220 aaatgacgccataatgttctatcatatatcatacccctatccaactcattaatctctagatatatcttaatagtttctctta-agtttttctaggtcatc 37598318  T
Q  322 atctaactctagtgattcgattgccctccatctggtctaccctccttactacataatc 379  Q
     |||  |||| ||||||  | | | || |||||| ||||| || ||||||||||||||    
T  37598319 ttctgcctctggtgatttaactacgcttcatctgatctactcttcttactacataatc 37598376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 236 - 320
Target Start/End: Complemental strand, 43308781 - 43308696
Alignment:
Q  236 atgttctatcataaaccatacttcgatccaactgattaatctctata-tcttcttaatagtttctcttatagttcttctaagtctt 320  Q
    ||||||||||||| | ||||  || |||||||||||||||||||| | | |||||||||||||||||| ||||| ||||| |||||    
T  43308781 atgttctatcatatatcatatctctatccaactgattaatctctagatttttcttaatagtttctcttgtagtttttctaggtctt 43308696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 223 - 294
Target Start/End: Complemental strand, 29601124 - 29601052
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatag 294  Q
    ||||||| ||||||||||||||||||||| ||| ||  |||||||| ||||||||||| ||| ||||||||||    
T  29601124 aaattacatcataatgttctatcataaactatatttgaatccaactcattaatctctaaatctttcttaatag 29601052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 331
Target Start/End: Original strand, 30294180 - 30294280
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttctt-aatagtttctcttatagttcttctaagtcttcatctaactc 330  Q
    |||| |||| ||||||||| ||||||| ||||||||| ||| | || || ||||| || |||||||| |||||||||||||||| |||||| |||| |||    
T  30294180 catagtgttttatcataaatcatacttagatccaactcattgacctataaatcttttttaatagtttatcttatagttcttctaggtcttcctctacctc 30294279  T
Q  331 t 331  Q
    |    
T  30294280 t 30294280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 384 - 447
Target Start/End: Original strand, 45289318 - 45289379
Alignment:
Q  384 tgcccaaaccacctaagcctattttccactgtcttttctactgtctatagctgctaccccaact 447  Q
    |||||||||||||||||||||||||||||  ||||||||||||   |||| |||||||||||||    
T  45289318 tgcccaaaccacctaagcctattttccaccatcttttctactg--aataggtgctaccccaact 45289379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 233 - 326
Target Start/End: Complemental strand, 11284210 - 11284121
Alignment:
Q  233 ataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagtttctcttatagttcttctaagtcttcatcta 326  Q
    ||||||||| |||||| |||||| ||  |||||||| |||||||||||   | ||||||||||||||||||||||| ||||| |||||| ||||    
T  11284210 ataatgttcaatcatataccatatttatatccaactcattaatctcta---catcttaatagtttctcttatagtt-ttctaggtcttcctcta 11284121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 237 - 331
Target Start/End: Original strand, 19162652 - 19162746
Alignment:
Q  237 tgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactct 331  Q
    ||||||||||| | ||||||||  |||||||| ||||||||||| ||||| | |||||||||||||||||| | | ||| |||||| |||||||||    
T  19162652 tgttctatcatta-ccatacttgcatccaactcattaatctctaaatctttcctaatagtttctcttatagatttcctaggtcttcctctaactct 19162746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 220 - 326
Target Start/End: Original strand, 48953466 - 48953575
Alignment:
Q  220 attaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctata---tcttcttaatagtttctcttatagttcttctaag 316  Q
    |||||||||||||||| |||||||||||||| |||| || ||||||||| ||| | || ||||   |||| |||||  |||||||||||||| | ||| |    
T  48953466 attaaattacgtcatagtgttctatcataaatcatatttggatccaactcattgacctttataagttctttttaatgatttctcttatagttttcctagg 48953565  T
Q  317 tcttcatcta 326  Q
    ||||| ||||    
T  48953566 tcttcctcta 48953575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 273
Target Start/End: Complemental strand, 39208840 - 39208790
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgatta 273  Q
    ||||||||||||||||||||||||||||||||| || ||||| ||| ||||    
T  39208840 aaattacgtcataatgttctatcataaaccatatttggatcctactcatta 39208790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 378
Target Start/End: Complemental strand, 11581613 - 11581520
Alignment:
Q  285 ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctccttactacataat 378  Q
    |||||||||||||||||||||||| ||||| ||||||   || ||||||||||| || |  ||| |||||| | ||| || |||||||||||||    
T  11581613 ttcttaatagtttctcttatagtttttctaggtcttctcatacctctagtgatttgactcacctacatctgatgtactcttcttactacataat 11581520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 223 - 280
Target Start/End: Complemental strand, 32170637 - 32170580
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctcta 280  Q
    |||||| ||||||||||| ||||||| |||||| ||| |||||||| |||||||||||    
T  32170637 aaattatgtcataatgttatatcatagaccatatttctatccaacttattaatctcta 32170580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 447
Target Start/End: Original strand, 50960857 - 50960919
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctactgtctatagctgctaccccaact 447  Q
    ||||||||||||||||||||||||||||| ||  |||||||||    |||||| |||||||||||||    
T  50960857 acatgcccaaaccacctaagcctattttctaccatcttttcta----ctataggtgctaccccaact 50960919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 19758110 - 19758062
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctcta 280  Q
    |||||||||||||||||||||||| |  ||||||||| |||||||||||    
T  19758110 cataatgttctatcataaaccatattgagatccaactcattaatctcta 19758062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 314
Target Start/End: Original strand, 36820067 - 36820119
Alignment:
Q  263 ccaactgattaatctctatatctt-cttaatagtttctcttatagttcttcta 314  Q
    |||||| ||||||||||| ||||| |||||||||||||||||||||| |||||    
T  36820067 ccaactcattaatctctagatctttcttaatagtttctcttatagtttttcta 36820119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 270 - 373
Target Start/End: Complemental strand, 37351592 - 37351488
Alignment:
Q  270 attaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctcctt 368  Q
    ||||||||||| ||||| ||| || |||||||| |||||| ||||| ||||||  ||| ||||||||||| |  | || |||||||| ||||| ||||||    
T  37351592 attaatctctagatctttcttgattgtttctctaatagtttttctaggtcttcccctacctctagtgatttgcctcccttccatctgatctactctcctt 37351493  T
Q  369 actac 373  Q
    |||||    
T  37351492 actac 37351488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 425
Target Start/End: Original strand, 49503778 - 49503822
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctact 425  Q
    ||||||||||||||||||||||||||||| ||  |||||||||||    
T  49503778 acatgcccaaaccacctaagcctattttctaccatcttttctact 49503822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 51027790 - 51027758
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccata 255  Q
    |||||||||||||||||||||||||||||||||    
T  51027790 aaattacgtcataatgttctatcataaaccata 51027758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 425
Target Start/End: Complemental strand, 54128436 - 54128392
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctact 425  Q
    ||||||||||||||||||||||||||||| ||  |||||||||||    
T  54128436 acatgcccaaaccacctaagcctattttctaccatcttttctact 54128392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 55244501 - 55244453
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctcta 280  Q
    ||||||||||||||||| |||||| ||| |||||||| |||||||||||    
T  55244501 cataatgttctatcatataccatatttctatccaactcattaatctcta 55244453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 321
Target Start/End: Original strand, 19676131 - 19676230
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||| ||| ||||||| ||||||||| | |||| || ||||||||| ||||| ||||| || || | ||||||||||||||| |||| ||||| ||||||    
T  19676131 aaatcacgccataatgctctatcatacagcatatttggatccaactcattaacctctaaatttttcctaatagtttctcttacagtttttctaggtcttc 19676230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 285 - 384
Target Start/End: Original strand, 31261055 - 31261153
Alignment:
Q  285 ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctccttactacataatcaacat 384  Q
    ||||| |||||||||||||||||| ||||| |||||| |||  ||||||||||| || |  |||||||||| ||||| | | |||||||| |||| ||||    
T  31261055 ttcttgatagtttctcttatagtttttctaggtcttcctctgcctctagtgatttgact-acctccatctgatctactcacattactacaaaatctacat 31261153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 424
Target Start/End: Original strand, 46431897 - 46431940
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctac 424  Q
    |||||||||||||||||||||| | |||||| ||||||||||||    
T  46431897 acatgcccaaaccacctaagccgagtttccattgtcttttctac 46431940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 321
Target Start/End: Original strand, 50960687 - 50960786
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||  ||||||| ||||| ||| |||||| || ||||||||| ||||||||||| | | ||| ||||||||||||||| | || ||||| ||||||    
T  50960687 aaattacaccataatggtctatgatacaccatatttggatccaactcattaatctctaaacctttcctaatagtttctcttaaattttttctaggtcttc 50960786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 443
Target Start/End: Original strand, 33272246 - 33272308
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctactgtctatagctgctacccc 443  Q
    |||||||||||||| |||||||||||||| ||   |||||||||| | ||||| |||||||||    
T  33272246 acatgcccaaaccatctaagcctattttctaccaacttttctactatatataggtgctacccc 33272308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 367
Target Start/End: Original strand, 33755394 - 33755537
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||||||||||||||  |||  |||||||  | | ||||||| |||||||||||  | || | |||||||||||||||||||| ||||| || |||    
T  33755394 aaattacgtcataatgttcactca--aaccatatcttggtccaactcattaatctctaagtttttcctaatagtttctcttatagtttttctaggttttc 33755491  T
Q  322 atctaactctagtgattcgattgccctccatctggtctaccctcct 367  Q
     |||  |||||||||| |||    |||||||||| ||||| |||||    
T  33755492 ctctgcctctagtgatccgaccatcctccatctgatctactctcct 33755537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 381 - 423
Target Start/End: Complemental strand, 39235196 - 39235154
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttcta 423  Q
    ||||||||||||||||||||||||||||| ||  |||||||||    
T  39235196 acatgcccaaaccacctaagcctattttctaccatcttttcta 39235154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 277
Target Start/End: Complemental strand, 40991663 - 40991609
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatct 277  Q
    |||||||  |||||||||||||||||||||||| || | ||||||| ||||||||    
T  40991663 aaattacaccataatgttctatcataaaccatattttggtccaactcattaatct 40991609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 261 - 314
Target Start/End: Original strand, 46431767 - 46431821
Alignment:
Q  261 atccaactgattaatctctatatcttctt-aatagtttctcttatagttcttcta 314  Q
    |||||||| ||||||||||| ||||| || ||||||||||||||||||| |||||    
T  46431767 atccaactcattaatctctagatcttttttaatagtttctcttatagtttttcta 46431821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 338
Target Start/End: Original strand, 2340814 - 2340883
Alignment:
Q  270 attaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgatt 338  Q
    ||||||||||| ||||| |||||||||||||||||||||| | ||| |||||  |||| || ||||||||    
T  2340814 attaatctctagatctttcttaatagtttctcttatagttttcctaggtctttctctagctttagtgatt 2340883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 308
Target Start/End: Complemental strand, 39235361 - 39235284
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagtt 308  Q
    |||||||||||||| ||||||||| || ||||||||| |||||  |||| ||| ||| ||||||||| || |||||||    
T  39235361 cataatgttctatcgtaaaccatatttagatccaactcattaacttctaaatctttcctaatagtttatcctatagtt 39235284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 303
Target Start/End: Original strand, 41842573 - 41842654
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatct-tcttaatagtttctctta 303  Q
    |||||||  ||||||||||||||| |||||||| ||| ||| |||| ||||| ||||| |||| |||| ||||||| |||||    
T  41842573 aaattacaccataatgttctatcaaaaaccatatttcaatctaactcattaacctctagatctatctttatagtttttctta 41842654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 280
Target Start/End: Complemental strand, 44571643 - 44571602
Alignment:
Q  239 ttctatcataaaccatacttcgatccaactgattaatctcta 280  Q
    ||||||||||||||||| || ||||||||| |||||||||||    
T  44571643 ttctatcataaaccatatttggatccaactcattaatctcta 44571602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 223
Target Start/End: Original strand, 49503570 - 49503623
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaatta 223  Q
    |||||||||||| |||||||||||||| ||| |||| |||| | ||||||||||    
T  49503570 aacaacaaccaagccttatcccactaagtagggtcggctacatggatcaaatta 49503623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 2195305 - 2195273
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccata 255  Q
    ||||||| |||||||||||||||||||||||||    
T  2195305 aaattacatcataatgttctatcataaaccata 2195273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 19737207 - 19737159
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctcta 280  Q
    ||||||||| |||||||||||||| |  ||||||||| |||||||||||    
T  19737207 cataatgttttatcataaaccatattgagatccaactcattaatctcta 19737159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 425
Target Start/End: Complemental strand, 21200606 - 21200562
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctact 425  Q
    |||||||||||||||||||| ||| |||||||  |||||||||||    
T  21200606 acatgcccaaaccacctaagtctagtttccaccatcttttctact 21200562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 425
Target Start/End: Complemental strand, 26490373 - 26490329
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctact 425  Q
    ||||| ||||||||||||||||||||||| ||  |||||||||||    
T  26490373 acatgtccaaaccacctaagcctattttctaccatcttttctact 26490329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 425
Target Start/End: Original strand, 37534430 - 37534474
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctact 425  Q
    ||||||||||||||  ||||||||||||||||  |||||||||||    
T  37534430 acatgcccaaaccaggtaagcctattttccaccatcttttctact 37534474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 261 - 320
Target Start/End: Original strand, 41452828 - 41452888
Alignment:
Q  261 atccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtctt 320  Q
    |||||||| ||||||||||| ||||| |||||||||||  ||||||||| ||||| |||||    
T  41452828 atccaactcattaatctctagatctttcttaatagtttaacttatagtttttctatgtctt 41452888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 409
Target Start/End: Original strand, 48734359 - 48734387
Alignment:
Q  381 acatgcccaaaccacctaagcctattttc 409  Q
    |||||||||||||||||||||||||||||    
T  48734359 acatgcccaaaccacctaagcctattttc 48734387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 218 - 274
Target Start/End: Original strand, 55384063 - 55384119
Alignment:
Q  218 aaattaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaa 274  Q
    |||| |||||||||||||| ||||||||||||| |||| || ||| ||||| |||||    
T  55384063 aaatcaaattacgtcataacgttctatcataaatcatatttagattcaacttattaa 55384119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 8e-22; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 232 - 379
Target Start/End: Complemental strand, 47147594 - 47147448
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactc 330  Q
    ||||||||||||||||| | ||||  || |||||||| ||||||||||| ||||| |||||||||||||  ||||||| ||||| |||||| |||  |||    
T  47147594 cataatgttctatcatatatcata--tctatccaactcattaatctctagatctttcttaatagtttcttctatagtttttctaggtcttcctctgcctc 47147497  T
Q  331 tagtgattcgattgccctccatctggtctaccctccttactacataatc 379  Q
    ||||||| ||| | | ||||||||| | ||| |||||||||||||||||    
T  47147496 tagtgatccgactactctccatctgatttactctccttactacataatc 47147448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 223 - 331
Target Start/End: Complemental strand, 51421962 - 51421853
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    ||||||||||||||||||||||||||||||||  || ||||||| | ||||| ||||| ||| ||| |||||||||||||||||||| |||||| |||||    
T  51421962 aaattacgtcataatgttctatcataaaccatttttggatccaattcattaacctctaaatctttcctaatagtttctcttatagtttttctaaatcttc 51421863  T
Q  322 atctaactct 331  Q
     |||| ||||    
T  51421862 ctctacctct 51421853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 170 - 321
Target Start/End: Original strand, 45204842 - 45204988
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| |||||||||||||| | | || | |||| ||||||||||||     || | |||||||||||||||||||||| || |||||||||     
T  45204842 aacaacaaccaagccttatcccactaagttgggtgggctacatagatcaaatta-----cgcc-taatgttctatcataaaccatatttggatccaactt 45204935  T
Q  270 attaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    ||||| ||||| ||| ||| |||||||||||||||||||| ||||| ||||||    
T  45204936 attaaactctaaatctttcctaatagtttctcttatagtttttctaggtcttc 45204988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 170 - 332
Target Start/End: Original strand, 2557673 - 2557832
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| |||||||||||||||| | || | |||| | |||||||||| |  |    ||||||||||||||||||||||| ||||||||||||     
T  2557673 aacaacaaccaagccttatcccactaaatggagttggctacatggatcaaattacacca----ataatgttctatcataaaccatatttcgatccaactc 2557768  T
Q  270 attaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttcatctaactcta 332  Q
     |||||||  | || |||||||||||||||||||| |||| |||||  ||||| |||| |||||    
T  2557769 gttaatcttcagatccttcttaatagtttctcttacagtttttctagatcttcctctacctcta 2557832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 236 - 404
Target Start/End: Original strand, 21945701 - 21945872
Alignment:
Q  236 atgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagt 334  Q
    |||||||||||||||||||| |||  ||||||| |||||| || | ||| ||| ||||||||||| | |||||| ||||| |||||| ||   |||||||    
T  21945701 atgttctatcataaaccatatttcagtccaactcattaatttccaaatctttcctaatagtttctatgatagtttttctaggtcttcctcagcctctagt 21945800  T
Q  335 gattcgattgccctccatctggtctaccctccttactacataa--tcaacatgcccaaaccacctaagccta 404  Q
    |||  || |  |||||||||| ||||| |||||||||||| ||  || ||||| ||||||||||||||||||    
T  21945801 gatgtgactatcctccatctgatctactctccttactacagaatctctacatgtccaaaccacctaagccta 21945872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 170 - 286
Target Start/End: Complemental strand, 55008026 - 55007915
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| |||||||||||||| | | |||| |||| | ||||     |||||||||||||||| |||||||||||||||| |||| |||||||     
T  55008026 aacaacaaccaagccttatcccactaagtggggtcggctacatggatc-----aaattacgtcataatgatctatcataaaccatatttcggtccaactc 55007932  T
Q  270 attaatctctatatctt 286  Q
    ||||||||||| |||||    
T  55007931 attaatctctaaatctt 55007915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 170 - 296
Target Start/End: Complemental strand, 25575104 - 25574982
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| |||||||||||||||| | |||  |||| | |||||||||| |  ||     ||||||||||||||||||||| ||||||||||||     
T  25575104 aacaacaaccaagccttatcccactaaatggggtctgctacatggatcaaattacaccac-----aatgttctatcataaaccatatttcgatccaactc 25575010  T
Q  270 attaatctctatatc-ttcttaatagtt 296  Q
    ||||||||||| ||| ||||||||||||    
T  25575009 attaatctctagatctttcttaatagtt 25574982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 220 - 314
Target Start/End: Original strand, 56439618 - 56439713
Alignment:
Q  220 attaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttcta 314  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||| |||||| || | ||| ||| ||||||||||||| |||||| |||||    
T  56439618 attaaattacgctataatgttctatcataaaccatatttcgatccaactaattaatttccaaatctttcataatagtttctctgatagtttttcta 56439713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 26024900 - 26024986
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagtt 308  Q
    |||||||  |||||||||||||||||||||||   ||||||||||| ||||||||||| ||| |||||||||||||||| |||||||    
T  26024900 aaattacaccataatgttctatcataaaccatgtctcgatccaactcattaatctctagatctttcttaatagtttctcatatagtt 26024986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 223 - 319
Target Start/End: Complemental strand, 37488323 - 37488226
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtct 319  Q
    |||||||| ||||||| |||||||| ||||||| || |||| |||| |||||| |||| ||||| |||||||||||||||||||||| ||||| ||||    
T  37488323 aaattacgccataatgctctatcattaaccatattttgatcaaacttattaatttctagatctttcttaatagtttctcttatagtttttctaggtct 37488226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 263 - 374
Target Start/End: Complemental strand, 26356811 - 26356699
Alignment:
Q  263 ccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctac 361  Q
    |||||| ||||||||||| ||| ||| ||| |||||||||||||||| ||||| ||||||  ||| ||||||||||| || | ||||||||| | |||||    
T  26356811 ccaactcattaatctctagatccttcataacagtttctcttatagtttttctaggtcttcccctacctctagtgatttgactcccctccatccgatctac 26356712  T
Q  362 cctccttactaca 374  Q
     ||||||||||||    
T  26356711 tctccttactaca 26356699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 232 - 379
Target Start/End: Original strand, 42639079 - 42639227
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactc 330  Q
    ||||||||||||||| | |||||| ||| |||||||| ||||||| ||| ||| ||||||||||||||||||  |||| |||||  | ||| |||| |||    
T  42639079 cataatgttctatcaaataccatatttctatccaactcattaatcgctagatctttcttaatagtttctcttgcagtttttctagatattcctctacctc 42639178  T
Q  331 tagtgattcgattgccctccatctggtctaccctccttactacataatc 379  Q
    |||||||| || | ||||||||||  | ||||| |||||| ||| ||||    
T  42639179 tagtgatttgactcccctccatctaatttaccccccttaccacagaatc 42639227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 232 - 337
Target Start/End: Original strand, 13805324 - 13805430
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactc 330  Q
    |||||||||||||||||||||||| |||  ||||||| |||| |||| | ||| ||||| |||||||||||||||||| ||||| || ||| |||  |||    
T  13805324 cataatgttctatcataaaccatatttccgtccaacttattactctcaaaatctttcttcatagtttctcttatagtttttctaggttttcctctgcctc 13805423  T
Q  331 tagtgat 337  Q
    |||||||    
T  13805424 tagtgat 13805430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 232 - 321
Target Start/End: Complemental strand, 21107215 - 21107125
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    ||||| |||||||||||||||||| || ||||||||| ||||||| ||| | | ||| |||||||||||||||||||| ||||| ||||||    
T  21107215 cataaagttctatcataaaccatatttggatccaactaattaatcactaaaactttcctaatagtttctcttatagtttttctaggtcttc 21107125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 232 - 301
Target Start/End: Original strand, 30621260 - 30621330
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctct 301  Q
    |||||||||||||||||||||||| |||| ||||||  ||||||||||| ||| |||||||||||||||||    
T  30621260 cataatgttctatcataaaccatatttcggtccaacacattaatctctaaatctttcttaatagtttctct 30621330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 223 - 305
Target Start/End: Original strand, 40420264 - 40420345
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagtttctcttata 305  Q
    |||||||||| |||||||||||||||||||||| |  ||| ||||| |||||||||||| | || ||||||||||||||||||    
T  40420264 aaattacgtcgtaatgttctatcataaaccatattaggattcaactcattaatctctat-tttttttaatagtttctcttata 40420345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 223 - 336
Target Start/End: Complemental strand, 49987640 - 49987526
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||| ||||||| |||||||| ||||||| || |||||| || ||| ||||| |  |||| |||||||||||||||||||||| ||||| ||||||    
T  49987640 aaattacgccataatgctctatcatgaaccatagttggatccatctcatttatctccaagtctttcttaatagtttctcttatagtttttctaggtcttc 49987541  T
Q  322 atctaactctagtga 336  Q
     |||  |||||||||    
T  49987540 ctctgcctctagtga 49987526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 223 - 331
Target Start/End: Complemental strand, 35690503 - 35690394
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||| ||||||||||||||||||||| |  || |||| |||| ||||| ||||| || || | |||||||||||||||||||| ||||| ||||||    
T  35690503 aaattacgccataatgttctatcataaaccctgattggatcaaactcattaacctctaaatttttcgtaatagtttctcttatagtttttctaggtcttc 35690404  T
Q  322 atctaactct 331  Q
     |||| ||||    
T  35690403 ctctacctct 35690394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 223 - 306
Target Start/End: Complemental strand, 44385062 - 44384979
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatag 306  Q
    ||||||| ||||||||||||||||||||||||| |   |||||||| ||||||||||| ||| |||||||||| |||||||||||    
T  44385062 aaattacatcataatgttctatcataaaccatattaatatccaacttattaatctctagatctttcttaatag-ttctcttatag 44384979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 170 - 304
Target Start/End: Original strand, 26037507 - 26037637
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| |||||||||||||| | | |||| |||| | |||| |||||     || |||| ||||||||||||||||||| || |||||||||     
T  26037507 aacaacaaccaaaccttatcccactaagtggggtcggctacatggatccaatta-----cgccatagtgttctatcataaaccatatttggatccaactc 26037601  T
Q  270 attaatctctatatc-ttcttaatagtttctcttat 304  Q
    ||| | ||||| ||| ||| ||||||||||||||||    
T  26037602 attcacctctaaatctttcctaatagtttctcttat 26037637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 374
Target Start/End: Complemental strand, 28351782 - 28351639
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactc 330  Q
    ||||| ||||||  |||||| ||| || ||||||||| | ||||||||| ||||| | |||||||||||||||||||| ||||| |||||  |||| |||    
T  28351782 cataaggttctactataaactatatttggatccaactcaataatctctaaatctttcgtaatagtttctcttatagtttttctaggtctttctctacctc 28351683  T
Q  331 tagtgattcgattgccctccatctggtctaccctccttactaca 374  Q
    | || ||  || |  |||||||||| ||||| ||||||||||||    
T  28351682 ttgtaatctgactatcctccatctgatctactctccttactaca 28351639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 235 - 385
Target Start/End: Original strand, 34233086 - 34233237
Alignment:
Q  235 aatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctag 333  Q
    |||||||||||||||||| || || |||| |||| |||||||||||  || || | |||||||||||| |||||| ||||| || ||| |||  ||||||    
T  34233086 aatgttctatcataaaccttattttgatctaactcattaatctctaggtctttatgaatagtttctctgatagtttttctaggttttcctctgcctctag 34233185  T
Q  334 tgattcgattgccctccatctggtctaccctccttactacataatcaacatg 385  Q
    ||||  ||    |||||||||  ||||| ||||||||||||||||| |||||    
T  34233186 tgatctgacgatcctccatctcatctactctccttactacataatctacatg 34233237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 225 - 319
Target Start/End: Complemental strand, 50680970 - 50680875
Alignment:
Q  225 attacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtct 319  Q
    |||||| |||||| |  |||||||||||||| | |||||||||| ||||||||||| ||| |||| |||| |||||||||||||| ||||| ||||    
T  50680970 attacgccataatatgttatcataaaccatattccgatccaactcattaatctctagatctttctaaataatttctcttatagtttttctaggtct 50680875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 337
Target Start/End: Complemental strand, 53540522 - 53540407
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||| | |||||||||||||||||||||||| ||   ||||||| ||||||||| |  || ||| ||||||||| |||||||||| ||||| ||||||    
T  53540522 aaattatgccataatgttctatcataaaccatatttttgtccaactcattaatctccaagtctttcctaatagtttatcttatagtttttctaggtcttc 53540423  T
Q  322 atctaactctagtgat 337  Q
     |||  ||||||||||    
T  53540422 ctctgcctctagtgat 53540407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 225 - 314
Target Start/End: Complemental strand, 50662618 - 50662528
Alignment:
Q  225 attacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttctt-aatagtttctcttatagttcttcta 314  Q
    |||||| ||||||||  |||||||||||||| ||||||| |||| ||||||||||| ||||| || |||| ||||||||||| || |||||    
T  50662618 attacgccataatgtgttatcataaaccatatttcgatcaaactcattaatctctagatctttttaaataatttctcttataatttttcta 50662528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 314
Target Start/End: Original strand, 33225885 - 33225975
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttcta 314  Q
    |||| ||||||||||||||||||||||| |||| || |||  ||||  |||||||||| ||| ||||||||||||||||||||| || |||||    
T  33225885 aaatcacgtcataatgttctatcataaaacatattttgat--aactcgttaatctctaaatctttcttaatagtttctcttataatttttcta 33225975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 280
Target Start/End: Original strand, 34208319 - 34208376
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctcta 280  Q
    ||||| || |||||||||||||||||||||||| || ||||||||| |||||||||||    
T  34208319 aaattgcgccataatgttctatcataaaccatatttggatccaactcattaatctcta 34208376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 331
Target Start/End: Complemental strand, 39708665 - 39708556
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||| |||| ||||||||||||||||||| || ||||||||| ||| | ||||| || |||  |||| ||||||||||||||| | ||| ||||||    
T  39708665 aaattacgacatagtgttctatcataaaccatatttggatccaactcattgacctctaaatcctttctaatggtttctcttatagttttcctaggtcttc 39708566  T
Q  322 atctaactct 331  Q
     |||| ||||    
T  39708565 ctctacctct 39708556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 331
Target Start/End: Original strand, 53518373 - 53518482
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||| |||| ||||||||||||||||||| || ||||||||| ||||| ||||| ||| ||| || |||||| ||| |||||| ||||| | ||||    
T  53518373 aaattacgccatagtgttctatcataaaccatatttagatccaactcattaacctctaaatctttcctattagtttttctcatagtttttctaggccttc 53518472  T
Q  322 atctaactct 331  Q
     |||| ||||    
T  53518473 ctctacctct 53518482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 308
Target Start/End: Complemental strand, 31043290 - 31043218
Alignment:
Q  237 tgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagtt 308  Q
    |||||||||| |||||||| || ||||||||| ||||||||||| ||| ||| |||||||||||||| |||||    
T  31043290 tgttctatcacaaaccatatttggatccaactcattaatctctaaatctttcctaatagtttctcttttagtt 31043218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 31339751 - 31339699
Alignment:
Q  228 acgtcataatgttctatcataaaccatacttcgatccaactgattaatctcta 280  Q
    ||||||||||||||||||||  |||||| |||||||||||| |||||||||||    
T  31339751 acgtcataatgttctatcatgtaccatatttcgatccaactcattaatctcta 31339699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 361
Target Start/End: Original strand, 40018250 - 40018378
Alignment:
Q  234 taatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactcta 332  Q
    ||||||||||||||| | ||||   | |||||||| ||| ||||||| ||||| ||||| ||||| |||||||||| ||||||||||| || |  |||||    
T  40018250 taatgttctatcatatatcatatccctatccaactcattgatctctagatctttcttaacagtttttcttatagtttttctaagtctttatttgcctcta 40018349  T
Q  333 gtgattcgattgccctccatctggtctac 361  Q
    |||||| || | |||| |||||| |||||    
T  40018350 gtgatttgactacccttcatctgatctac 40018378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 233 - 371
Target Start/End: Original strand, 7681970 - 7682109
Alignment:
Q  233 ataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactct 331  Q
    ||||||| |||||||| |||||| ||| ||| |||| |||||||| || || || ||| |||||||||||||||||| ||| | |||||| |||  ||||    
T  7681970 ataatgtcctatcatataccatatttctatctaactcattaatctatagatttttcttgatagtttctcttatagtttttccaggtcttcctctgcctct 7682069  T
Q  332 agtgattcgattgccctccatctggtctaccctccttact 371  Q
    ||||||  || | ||||||||||  |||||  ||||||||    
T  7682070 agtgatgtgactaccctccatctaatctactttccttact 7682109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 232 - 306
Target Start/End: Original strand, 37042723 - 37042798
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatag 306  Q
    ||||||||||||||| | ||| || ||| |||||||| | ||||||||| ||| ||||||||||||||||||||||    
T  37042723 cataatgttctatcaaataccgtatttctatccaactcaataatctctagatctttcttaatagtttctcttatag 37042798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 262 - 319
Target Start/End: Complemental strand, 10209229 - 10209171
Alignment:
Q  262 tccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtct 319  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||||||| ||||| ||||    
T  10209229 tccaactcattaatctctagatccttcttaatagtttctcttatagtttttctaggtct 10209171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 372
Target Start/End: Original strand, 25967359 - 25967461
Alignment:
Q  271 ttaatctctatatcttctt-aatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtctaccctcctta 369  Q
    |||||||||| ||||| || ||||||||||||||||||| ||| |||||||| |||  |||||||||||  | |  ||| |||||| ||||| |||||||    
T  25967359 ttaatctctagatcttttttaatagtttctcttatagttattcaaagtcttcctctgtctctagtgatttaactatccttcatctgatctactctcctta 25967458  T
Q  370 cta 372  Q
    |||    
T  25967459 cta 25967461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 27049227 - 27049301
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtt 296  Q
    |||||||| |||||||||| ||||||||||||| || || |||||| |||||||| || ||| ||||||||||||    
T  27049227 aaattacgccataatgttcgatcataaaccatatttggaaccaactcattaatctataaatctttcttaatagtt 27049301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 223 - 280
Target Start/End: Complemental strand, 5306528 - 5306471
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctcta 280  Q
    |||||||| ||||||||| | |||||||||||| || ||||||||| |||||||||||    
T  5306528 aaattacgccataatgttatgtcataaaccatatttggatccaactcattaatctcta 5306471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 308
Target Start/End: Complemental strand, 16003161 - 16003072
Alignment:
Q  220 attaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttct-taatagtttctcttatagtt 308  Q
    |||||||||||||||| |||| ||||||||| |||| || ||||||||| ||| | ||||| || || | |||| |||||||||||||||    
T  16003161 attaaattacgtcatagtgttttatcataaatcatatttagatccaactcattgacctctaaattttttctaatggtttctcttatagtt 16003072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 285 - 338
Target Start/End: Complemental strand, 18966774 - 18966721
Alignment:
Q  285 ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgatt 338  Q
    |||||||||||||||||||||||| || || |||||| |||| |||||||||||    
T  18966774 ttcttaatagtttctcttatagttgttttaggtcttcttctacctctagtgatt 18966721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 232 - 308
Target Start/End: Original strand, 31403093 - 31403170
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagtt 308  Q
    ||||||| ||||||||| |||| | ||| |||||||| ||||||||||| ||| ||| ||||||||| ||||||||||    
T  31403093 cataatgctctatcatataccacatttctatccaactaattaatctctagatctttcataatagtttttcttatagtt 31403170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 226 - 279
Target Start/End: Complemental strand, 34379632 - 34379579
Alignment:
Q  226 ttacgtcataatgttctatcataaaccatacttcgatccaactgattaatctct 279  Q
    ||||| |||||| ||||||||||||||||| |||| ||||||| ||||||||||    
T  34379632 ttacgccataatattctatcataaaccatatttcggtccaactcattaatctct 34379579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 232 - 308
Target Start/End: Complemental strand, 47372874 - 47372797
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagtt 308  Q
    ||||||||||||| ||| |||||| ||| |||||||| ||||||||||  ||| || ||| |||||||||||||||||    
T  47372874 cataatgttctataatataccatatttctatccaactcattaatctctggatctttattagtagtttctcttatagtt 47372797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 170 - 294
Target Start/End: Original strand, 55388213 - 55388333
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| |||||||||||||| | | |||||| || | |||||||||| |  ||     |||||||||||||||| |||| ||||||| ||||     
T  55388213 aacaacaaccaagccttatcccactaagtggggtcgacaacatggatcaaattacaccac-----aatgttctatcataaatcatatttcgatctaactc 55388307  T
Q  270 attaatctctatatc-ttcttaatag 294  Q
    ||||||||| | ||| ||||||||||    
T  55388308 attaatctccaaatctttcttaatag 55388333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 335
Target Start/End: Original strand, 934490 - 934593
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactc 330  Q
    ||||||||||||||||| | ||||   | |||||||| ||||||||||| | ||| ||||||||||||||| |||||| |||| ||||||| |||  |||    
T  934490 cataatgttctatcatatatcataaccctatccaactcattaatctctagaactttcttaatagtttctctaatagtttttct-agtcttcctctgcctc 934588  T
Q  331 tagtg 335  Q
    |||||    
T  934589 tagtg 934593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 379
Target Start/End: Complemental strand, 2589295 - 2589147
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttcatctaactc 330  Q
    |||| |||||||||| |||||||| ||  |||||||| ||||||||||| || | |||| ||||||||||||||  || ||||| ||| |  |||| |||    
T  2589295 catagtgttctatcaaaaaccatattttcatccaactcattaatctctagatccatcttgatagtttctcttatgctttttctaggtcgtgctctacctc 2589196  T
Q  331 tagtgattcgattgccctccatctggtctaccctccttactacataatc 379  Q
    |||| |||  | | |||||||| || ||||| ||||| |||||| ||||    
T  2589195 tagtaatttaactcccctccatttgatctactctcctaactacagaatc 2589147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 307
Target Start/End: Complemental strand, 6843838 - 6843762
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagt 307  Q
    ||||||||||||| ||| | |||| ||| ||| |||| ||||||||||| ||| ||||||||||| |||||||||||    
T  6843838 cataatgttctattatataacatatttctatcaaactcattaatctctagatctttcttaatagtctctcttatagt 6843762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 308
Target Start/End: Complemental strand, 20047629 - 20047581
Alignment:
Q  261 atccaactgattaatctctatatcttctt-aatagtttctcttatagtt 308  Q
    |||||||| ||||||||||| |||||||| |||||||||||||||||||    
T  20047629 atccaactcattaatctctagatcttctttaatagtttctcttatagtt 20047581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 315
Target Start/End: Original strand, 21214641 - 21214729
Alignment:
Q  228 acgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaa 315  Q
    ||||||||||| ||||||||| | |||| |||  ||||||| |||| ||| || | ||| |||||||||||||||||||||| ||||||    
T  21214641 acgtcataatgctctatcatacatcatatttctctccaactcattactctatagacctttcttaatagtttctcttatagtttttctaa 21214729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 425
Target Start/End: Complemental strand, 31459088 - 31459044
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctact 425  Q
    ||||||||||||||||||||||||||||| ||  |||||||||||    
T  31459088 acatgcccaaaccacctaagcctattttctaccatcttttctact 31459044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 425
Target Start/End: Original strand, 38570971 - 38571015
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctact 425  Q
    |||||||||||||||||||||||| |||||||| |||||| ||||    
T  38570971 acatgcccaaaccacctaagcctagtttccactatcttttgtact 38571015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 224 - 338
Target Start/End: Original strand, 45184184 - 45184297
Alignment:
Q  224 aattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttca 322  Q
    ||||||||||||||||| ||| |||||||||   |  || ||||| |||||||||| |||| ||| ||||||||  |||||||||| ||||| ||||||     
T  45184184 aattacgtcataatgttttattataaaccatgagtaaattcaactcattaatctctttatctttcataatagtt--tcttatagtttttctaggtcttcc 45184281  T
Q  323 tctaactctagtgatt 338  Q
    |||| |||| ||||||    
T  45184282 tctacctcttgtgatt 45184297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 425
Target Start/End: Complemental strand, 47611785 - 47611741
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctact 425  Q
    |||||||||||||||||||||||||||||||   |||||||||||    
T  47611785 acatgcccaaaccacctaagcctattttccatcatcttttctact 47611741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 425
Target Start/End: Complemental strand, 49987486 - 49987442
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctact 425  Q
    ||||| ||||||||||||||||||||||||||  |||||||||||    
T  49987486 acatgaccaaaccacctaagcctattttccaccatcttttctact 49987442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 300
Target Start/End: Original strand, 26024988 - 26025047
Alignment:
Q  242 tatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctc 300  Q
    |||||||||||||   ||||||||||| ||||||||||| ||| ||||||||||||||||    
T  26024988 tatcataaaccatgtctcgatccaactcattaatctctagatctttcttaatagtttctc 26025047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 308
Target Start/End: Original strand, 42293326 - 42293401
Alignment:
Q  234 taatgttctatcataaaccatacttcgatccaactgattaatctctatatctt-cttaatagtttctcttatagtt 308  Q
    ||||| ||||||||| ||||||  || ||| |||| |||||| |||| ||||| ||||||||||||||||||||||    
T  42293326 taatgctctatcatataccatatgtctatctaactcattaatttctagatctttcttaatagtttctcttatagtt 42293401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 378
Target Start/End: Complemental strand, 54470418 - 54470283
Alignment:
Q  244 tcataaaccatacttcgatccaactgattaatctctatatcttc-ttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgat 342  Q
    ||||| |||||| ||| |||||||| ||||||||||| | |||  ||||||| ||||||||||||| ||||  |||||| | |  ||||||| ||| ||     
T  54470418 tcatataccatatttctatccaactcattaatctctagaactttattaatagattctcttatagtttttcttggtcttcttttgcctctagtaatttgac 54470319  T
Q  343 tgccctccatctggtctaccctccttactacataat 378  Q
    | | |||||| || | ||| ||||||||||||||||    
T  54470318 tactctccatttgatttactctccttactacataat 54470283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 337
Target Start/End: Original strand, 55768546 - 55768665
Alignment:
Q  220 attaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttata-gttcttctaagt 317  Q
    |||||||| ||  |||||||||||||||| ||||||||| ||||||||| ||| |||| ||  || ||||||| ||||||| |||||  || ||||| ||    
T  55768546 attaaattgcgctataatgttctatcatacaccatactttgatccaactcattgatctttaattctttcttaacagtttcttttatatctttttctatgt 55768645  T
Q  318 cttcatctaactctagtgat 337  Q
    |||| |||  ||||||||||    
T  55768646 cttcttctgcctctagtgat 55768665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 337
Target Start/End: Original strand, 55832802 - 55832921
Alignment:
Q  220 attaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttata-gttcttctaagt 317  Q
    |||||||| ||  |||||||||||||||| ||||||||| ||||||||| ||| |||| ||  || ||||||| ||||||| |||||  || ||||| ||    
T  55832802 attaaattccgctataatgttctatcatacaccatactttgatccaactcattgatctttaattctttcttaacagtttcttttatatctttttctatgt 55832901  T
Q  318 cttcatctaactctagtgat 337  Q
    |||| |||  ||||||||||    
T  55832902 cttcttctgcctctagtgat 55832921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 331
Target Start/End: Complemental strand, 8286719 - 8286562
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaactg 269  Q
    |||||||||||| |||||||||||||| | | | || |||| | |||||||| |     ||||||| ||||||||||||||||| | || |||||||||     
T  8286719 aacaacaaccaagccttatcccactaagtgggggcggctacatggatcaaatga-----cgtcatagtgttctatcataaaccaaatttggatccaactc 8286625  T
Q  270 attaatctctatat-cttcttaatagtttctcttatagttcttctaagtcttcatctaactct 331  Q
    ||| | ||||| || |||  |||| |||||||| |||||| | ||| |||||| |||| ||||    
T  8286624 attgacctctaaatcctttctaatggtttctctaatagttttcctaggtcttcctctacctct 8286562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 379
Target Start/End: Original strand, 31897517 - 31897635
Alignment:
Q  262 tccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtcta 360  Q
    ||||||| ||| ||||||| ||| ||| |||||||||||||||||||| ||||| |||| |  ||| ||||||||||  || | ||||||||||  || |    
T  31897517 tccaactcatttatctctagatccttcctaatagtttctcttatagtttttctaggtctacccctacctctagtgatctgactcccctccatctaatcga 31897616  T
Q  361 ccctccttactacataatc 379  Q
    | ||||| |||||| ||||    
T  31897617 ctctcctaactacagaatc 31897635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 262 - 379
Target Start/End: Original strand, 31961355 - 31961473
Alignment:
Q  262 tccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcgattgccctccatctggtcta 360  Q
    ||||||| ||| ||||||| ||||| | |||||||||||||||||||| ||||| |||| |  ||| ||||||||||| || | | ||||||||  || |    
T  31961355 tccaactcatttatctctagatctttcctaatagtttctcttatagtttttctaggtctacccctacctctagtgatttgactcctctccatctaatcca 31961454  T
Q  361 ccctccttactacataatc 379  Q
    | ||||| |||||| ||||    
T  31961455 ctctcctaactacagaatc 31961473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 286
Target Start/End: Complemental strand, 41192284 - 41192230
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatctt 286  Q
    |||||||||||| |||| |||||| ||| |||||||| ||||||||||| |||||    
T  41192284 cataatgttctaccatataccatatttctatccaactcattaatctctagatctt 41192230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 170 - 267
Target Start/End: Complemental strand, 1095725 - 1095633
Alignment:
Q  170 aacaacaaccaacccttatcccactaaatagtgtcgactacgtagatcaaattaaattacgtcataatgttctatcataaaccatacttcgatccaac 267  Q
    |||||||||||| |||||||||||||||  | ||||  ||| | |||||||| |     || |||||||||||||||||||||||| ||| |||||||    
T  1095725 aacaacaaccaagccttatcccactaaacggggtcgggtacatcgatcaaataa-----cgccataatgttctatcataaaccatatttcaatccaac 1095633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 268
Target Start/End: Original strand, 20601702 - 20601747
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaact 268  Q
    |||||||||||||||||||||||||||| |||| ||  ||||||||    
T  20601702 aaattacgtcataatgttctatcataaatcatatttgaatccaact 20601747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 232 - 285
Target Start/End: Complemental strand, 26510611 - 26510558
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatct 285  Q
    ||||||||||||||  |||||||| || ||||||||| ||||||||||| ||||    
T  26510611 cataatgttctatcgcaaaccatatttggatccaactcattaatctctaaatct 26510558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 29399036 - 29398991
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaact 268  Q
    |||||||| ||||||||||||||||||||| || |||| |||||||    
T  29399036 aaattacgccataatgttctatcataaaccttatttcgttccaact 29398991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 341
Target Start/End: Original strand, 45569097 - 45569178
Alignment:
Q  261 atccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtcttcatctaactctagtgattcga 341  Q
    |||||||| ||| ||||||| || || ||||||||||||||||||| |  ||||| |||||| |||  ||||||||||||||    
T  45569097 atccaactcattgatctctagatttttcttaatagtttctcttataatgtttctaggtcttcctctgcctctagtgattcga 45569178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 319
Target Start/End: Complemental strand, 47612613 - 47612528
Alignment:
Q  235 aatgttctatcataaaccatacttcgatccaactgattaatctctatatcttct-taatagtttctcttatagttcttctaagtct 319  Q
    ||||||||||||||||||||| || | |||| || ||||||||| |  |||| | |||||||||||||| ||||| ||||| ||||    
T  47612613 aatgttctatcataaaccatattttggtccacctcattaatctccaagtcttatctaatagtttctcttctagtttttctaggtct 47612528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 338
Target Start/End: Complemental strand, 48033254 - 48033201
Alignment:
Q  285 ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgatt 338  Q
    |||||||||||||||||||||||| |  ||||||||| |||  |||||||||||    
T  48033254 ttcttaatagtttctcttatagttttcttaagtcttcctctgcctctagtgatt 48033201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 308
Target Start/End: Original strand, 50967078 - 50967163
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatcttcttaatagtttctcttatagtt 308  Q
    |||||||| |||||| |||| ||||| |||||||| |  ||||||| ||| |||||||    |||||||||||||||||| |||||    
T  50967078 aaattacgacataattttctttcatataccatactgcattccaactcattgatctctagtctttcttaatagtttctcttgtagtt 50967163  T

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Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 251
Target Start/End: Complemental strand, 3979152 - 3979124
Alignment:
Q  223 aaattacgtcataatgttctatcataaac 251  Q
    |||||||||||||||||||||||||||||    
T  3979152 aaattacgtcataatgttctatcataaac 3979124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 303
Target Start/End: Original strand, 7544602 - 7544654
Alignment:
Q  252 catacttcgatccaactgattaatctctatatc-ttcttaatagtttctctta 303  Q
    |||| ||||||| |||| ||||||||||| ||| |||||||||||||||||||    
T  7544602 catatttcgatcaaactcattaatctctagatctttcttaatagtttctctta 7544654  T

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Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 285 - 321
Target Start/End: Original strand, 8599054 - 8599090
Alignment:
Q  285 ttcttaatagtttctcttatagttcttctaagtcttc 321  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  8599054 ttcttaatagtttctcttatagtttttctaggtcttc 8599090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 327
Target Start/End: Complemental strand, 12494898 - 12494790
Alignment:
Q  220 attaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtc 318  Q
    ||||||| |||||||| |||||||||||| |||| | || ||||||||| ||| | ||||| || |||  |||| |||||||| |||||| | ||| |||    
T  12494898 attaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtc 12494799  T
Q  319 ttcatctaa 327  Q
    ||| |||||    
T  12494798 ttcctctaa 12494790  T

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Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 268
Target Start/End: Original strand, 22873646 - 22873694
Alignment:
Q  220 attaaattacgtcataatgttctatcataaaccatacttcgatccaact 268  Q
    |||||||||||| ||||||||||||||||| ||||| || || ||||||    
T  22873646 attaaattacgttataatgttctatcataacccatatttggaaccaact 22873694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 425
Target Start/End: Complemental strand, 28236241 - 28236197
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctact 425  Q
    |||||||||||||| |||||||||||||||||   ||||||||||    
T  28236241 acatgcccaaaccatctaagcctattttccaccaacttttctact 28236197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 425
Target Start/End: Complemental strand, 28497547 - 28497504
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctact 425  Q
    ||||||||||||||||||||||| ||||||||  |||||||||||    
T  28497547 acatgcccaaaccacctaagcct-ttttccacaatcttttctact 28497504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 409
Target Start/End: Complemental strand, 35690350 - 35690322
Alignment:
Q  381 acatgcccaaaccacctaagcctattttc 409  Q
    |||||||||||||||||||||||||||||    
T  35690350 acatgcccaaaccacctaagcctattttc 35690322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 425
Target Start/End: Original strand, 37773675 - 37773719
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctact 425  Q
    |||||||||||||| |||||||||||||| || | ||||||||||    
T  37773675 acatgcccaaaccatctaagcctattttctaccgacttttctact 37773719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 285 - 325
Target Start/End: Original strand, 38903831 - 38903870
Alignment:
Q  285 ttcttaatagtttctcttatagttcttctaagtcttcatct 325  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  38903831 ttcttaatagtttctcttatagtt-ttctaggtcttcatct 38903870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 337
Target Start/End: Complemental strand, 46372217 - 46372141
Alignment:
Q  262 tccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgat 337  Q
    ||||||| ||| ||||||| ||| ||| |||||||||||||||||||| ||||| |||| |  ||| ||||||||||    
T  46372217 tccaactcatttatctctagatccttcctaatagtttctcttatagtttttctaggtctacccctacctctagtgat 46372141  T

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Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 381 - 425
Target Start/End: Original strand, 51252685 - 51252729
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctact 425  Q
    ||||||||| |||||||||||||| |||||||  |||||||||||    
T  51252685 acatgcccataccacctaagcctagtttccaccatcttttctact 51252729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 320
Target Start/End: Original strand, 178509 - 178568
Alignment:
Q  262 tccaactgattaatctctatatctt-cttaatagtttctcttatagttcttctaagtctt 320  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||| ||||| |||||    
T  178509 tccaactcattaatctctatatctttcttaatagtttctcttatagtttttctaggtctt 178568  T

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Target: scaffold0018; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 447
Target Start/End: Original strand, 44092 - 44154
Alignment:
Q  381 acatgcccaaaccacctaagcctattttccactgtcttttctactgtctatagctgctaccccaact 447  Q
    |||||||||||||||||||||||||||||| |  |||||||||    |||||| |||||||||||||    
T  44092 acatgcccaaaccacctaagcctattttccgccatcttttcta----ctataggtgctaccccaact 44154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 313
Target Start/End: Original strand, 160374 - 160465
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttct 313  Q
    |||||||| |||||||||||||||||||||||| |||| || |||| |||||| |||  ||| ||| |||||||||||||| ||||| ||||    
T  160374 aaattacgccataatgttctatcataaaccatatttcggtcgaactcattaatttcttaatctttcctaatagtttctcttgtagtttttct 160465  T

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Target: scaffold0373 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 307
Target Start/End: Original strand, 2360 - 2436
Alignment:
Q  232 cataatgttctatcataaaccatacttcgatccaactgattaatctctatatc-ttcttaatagtttctcttatagt 307  Q
    ||||||||||||| ||| | |||| ||| ||| |||| ||||||||||| ||| ||||||||||| |||||||||||    
T  2360 cataatgttctattatataacatatttctatcaaactcattaatctctagatctttcttaatagtctctcttatagt 2436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 223 - 321
Target Start/End: Complemental strand, 66770 - 66670
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccatactt-cgatccaactgattaatctctatatc-ttcttaatagtttctcttatagttcttctaagtctt 320  Q
    |||||||| |||||||||||||||||| ||||| || | ||| |||| ||||||||||| ||| ||||||||| ||| | ||||| || ||||| |||||    
T  66770 aaattacgccataatgttctatcataagccatatttcctatctaactcattaatctctagatctttcttaataattttttttataatttttctaggtctt 66671  T
Q  321 c 321  Q
    |    
T  66670 c 66670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 338
Target Start/End: Complemental strand, 11982 - 11913
Alignment:
Q  270 attaatctctatatc-ttcttaatagtttctcttatagttcttctaagtcttcatctaactctagtgatt 338  Q
    ||||||||||| ||| |||||||||||||||||||||||| |||||  ||||| | |  |||||||||||    
T  11982 attaatctctagatccttcttaatagtttctcttatagtttttctagttcttcttttgcctctagtgatt 11913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 273
Target Start/End: Complemental strand, 39554 - 39501
Alignment:
Q  220 attaaattacgtcataatgttctatcataaaccatacttcgatccaactgatta 273  Q
    ||||||||||| ||| |||||||||||||||||| | || ||||||||| ||||    
T  39554 attaaattacgccatcatgttctatcataaaccacatttggatccaactcatta 39501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 327
Target Start/End: Original strand, 25579 - 25687
Alignment:
Q  220 attaaattacgtcataatgttctatcataaaccatacttcgatccaactgattaatctctatat-cttcttaatagtttctcttatagttcttctaagtc 318  Q
    ||||||| |||||||| |||||||||||| |||| | || ||||||||| ||| | ||||| || |||  |||| |||||||| |||||| | ||| |||    
T  25579 attaaatgacgtcatagtgttctatcatacaccaaatttggatccaactcattgacctctaaatcctttctaatggtttctctaatagttttcctaggtc 25678  T
Q  319 ttcatctaa 327  Q
    ||| |||||    
T  25679 ttcctctaa 25687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 223 - 255
Target Start/End: Original strand, 58276 - 58308
Alignment:
Q  223 aaattacgtcataatgttctatcataaaccata 255  Q
    |||||||| ||||||||||||||||||||||||    
T  58276 aaattacgacataatgttctatcataaaccata 58308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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