View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8959_low_2 (Length: 965)
Name: NF8959_low_2
Description: NF8959
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8959_low_2 |
 | |
|
| [»] scaffold0252 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 742; Significance: 0; HSPs: 22)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 742; E-Value: 0
Query Start/End: Original strand, 19 - 950
Target Start/End: Complemental strand, 4647851 - 4646938
Alignment:
| Q |
19 |
aggtgtggtggtattgccttggaatcttagagttgaatgtgctactcttcaaactctcatgttcaattcccaattcttccaagtaaaaatttagttacac |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
4647851 |
aggtgtggtggtattgccttggaatcttagagttgaatgtgctactcttcaaactctcatgttcaaatcccaattcttccaagtaaaaatttagttacac |
4647752 |
T |
|
| Q |
119 |
tcaatataaactgagaaagtaaaggcaatgtgtcaaattagtaatggtgaaatgagtagaaatgtattaagaattagttttcaaagttttctcttttttc |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4647751 |
tcaatataaactgagaaagtaaaggcaatgtgtcaaattagtaatggtgaaatgagtagaaatgtattaagaattagttttcaaagttttctcttttttc |
4647652 |
T |
|
| Q |
219 |
actctatctatcctgtccatcaacttattttgaagttgattctggttttacttatatggtaaggttacttttgtgagtttgattgacatataaagaatgc |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
4647651 |
actctatctatcctgtccatcaacttattttgaagttgattctggttttacttatatggtaaggttacttttgtgagtttgattgacatataaagaattc |
4647552 |
T |
|
| Q |
319 |
aggtgatacagtttttcatatgtttatagatgatattttggttgaacaatatgctgatgtgattgcatgggctggtatgtgattgcatgggctggtgctc |
418 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||| |
|
|
| T |
4647551 |
aggtgatacagtttttcatatgtttatagatgatattttggctgaacattatgctgatgtg--------------------attgcatgggctggtgctc |
4647472 |
T |
|
| Q |
419 |
cctgtcaataaggattgtgcttgttcatatgtactctccaggaggaaggaatcaaattgaaagagttaatctttcaatcaagcttcaatgattattccaa |
518 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4647471 |
cctgtcaataaggattgtgcttgttcatatgtactctcaaggaggaaggaatcaaattgaaagagttaatctttcaatcaagcttcaacgattattccaa |
4647372 |
T |
|
| Q |
519 |
aattaatatcatgcgcggaggatatgtccgtctggagaaagactcattgccacaatttaaagcgcgatattgacaattgttgcaaagaaatgcaagacac |
618 |
Q |
| |
|
|||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4647371 |
aattgatatcatgcgggaaggatatgtccgtctggagaaagactcattgccacaatttaaagcgcgatattgacaattgttgcaaagaaatgcaagacac |
4647272 |
T |
|
| Q |
619 |
acggctgcaagctactagtgaggaccaaacttgcatgtttgagcttaggaaacacttgcaacggctgctgtcccaagacgatgcc--tattggcatcaat |
716 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||||||||||| ||||||| ||||||||||||| ||||| ||||||||||| ||||||| |||| |
|
|
| T |
4647271 |
gcggctgcaagctactggtgaggaccaaactcgcatgtttgagctaaggaaacgcttgcaacggctgatgtcctaagacgatgcctatattggcgtcaac |
4647172 |
T |
|
| Q |
717 |
gtgctaaagctcactggtacaaggatggcgatagaaatacaaagttttttcatgcatcggcaatagcttggaaaaaggtaaaccgtataacctctcttga |
816 |
Q |
| |
|
|||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||||||||| |
|
|
| T |
4647171 |
gtgctaaagcacacttgtacaaggatggtgatagaaatacaaagttttttcatgcatcggcaacagctcggaaaaagttaaaccgtataacctctcttga |
4647072 |
T |
|
| Q |
817 |
tgatgatgtaggaaataaggttactagtgaacaaggtttgcaagaagtagtacggaattattttgaaaatatttttcaacagcaggatagtgatttttct |
916 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
4647071 |
tgatgatgtaggaaataaggttactagtgaacaaggtttgcaagaagtagcgcagaattattttgtgaatatttttcaacagcaggatagtgatttttct |
4646972 |
T |
|
| Q |
917 |
tctgtcatagatgttattaatccgtctatctctg |
950 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
4646971 |
tctgtcatagatgttattaatccgtctatctctg |
4646938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 803 - 950
Target Start/End: Original strand, 41598171 - 41598318
Alignment:
| Q |
803 |
ataacctctcttgatgatgatgtaggaaataaggttactagtgaacaaggtttgcaagaagtagtacggaattattttgaaaatatttttcaacagcagg |
902 |
Q |
| |
|
||||||||||||||||||||||| || ||||| || ||| ||||||| || |||||||||||| ||| |||||||||| ||||||||||||||| ||| |
|
|
| T |
41598171 |
ataacctctcttgatgatgatgttggtaataaagtcactggtgaacatggcttgcaagaagtaacacgaaattattttgtaaatatttttcaacaacaga |
41598270 |
T |
|
| Q |
903 |
atagtgatttttcttctgtcatagatgttattaatccgtctatctctg |
950 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41598271 |
atagtgatttttcttctgtcatagatgttattaatccgtctatctctg |
41598318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 245 - 365
Target Start/End: Complemental strand, 4667039 - 4666917
Alignment:
| Q |
245 |
attttgaagttgattctggttttacttatatggtaaggttac--ttttgtgagtttgattgacatataaagaatgcaggtgatacagtttttcatatgtt |
342 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||||||||| | ||||||||||||||||| ||||| |||||| ||||||||| ||||||||| || || |
|
|
| T |
4667039 |
attttaaagttgattctatttttacttatatggtaaggttgcatttttgtgagtttgattggcatatcaagaatccaggtgatagagtttttcagatttt |
4666940 |
T |
|
| Q |
343 |
tatagatgatattttggttgaac |
365 |
Q |
| |
|
||||||||||||| ||| ||||| |
|
|
| T |
4666939 |
tatagatgatattatggctgaac |
4666917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 251 - 382
Target Start/End: Original strand, 4712075 - 4712208
Alignment:
| Q |
251 |
aagttgattctggttttacttatatggtaaggttac--ttttgtgagtttgattgacatataaagaatgcaggtgatacagtttttcatatgtttataga |
348 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||| ||||||||||||||| | ||| |||||| |||||||| ||||||||| || ||||| | |
|
|
| T |
4712075 |
aagttgattctagttttacttatatggtaaggttacatttttgtgagtttgatctgcttatcaagaataaaggtgatagagtttttcagatatttatcaa |
4712174 |
T |
|
| Q |
349 |
tgatattttggttgaacaatatgctgatgtgatt |
382 |
Q |
| |
|
||||||||||| ||||||||| |||||||||||| |
|
|
| T |
4712175 |
tgatattttggctgaacaatacgctgatgtgatt |
4712208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 245 - 382
Target Start/End: Original strand, 4846009 - 4846148
Alignment:
| Q |
245 |
attttgaagttgattctggttttacttatatggtaaggttac--ttttgtgagtttgattgacatataaagaatgcaggtgatacagtttttcatatgtt |
342 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||| | || |||||| |||||||| ||||||||| || || |
|
|
| T |
4846009 |
atttcgaagttgattctagttttacttatatggtaaggttacatttttgtgagtttgatctgcttaccaagaataaaggtgatagagtttttcagatatt |
4846108 |
T |
|
| Q |
343 |
tatagatgatattttggttgaacaatatgctgatgtgatt |
382 |
Q |
| |
|
||| |||||||||||| ||||| |||||||||||||||| |
|
|
| T |
4846109 |
tatcaatgatattttggctgaactatatgctgatgtgatt |
4846148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 247 - 381
Target Start/End: Original strand, 4783831 - 4783967
Alignment:
| Q |
247 |
tttgaagttgattctggttttacttatatggtaaggttac--ttttgtgagtttgattgacatataaagaatgcaggtgatacagtttttcatatgttta |
344 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| || | | ||||||| | ||||||| || || | |
|
|
| T |
4783831 |
tttgaagttgattctgcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaatttttcagattttca |
4783930 |
T |
|
| Q |
345 |
tagatgatattttggttgaacaatatgctgatgtgat |
381 |
Q |
| |
|
||||||||| ||||| |||||| |||||||||||| |
|
|
| T |
4783931 |
tagatgatagtttggctgaacatgctgctgatgtgat |
4783967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 247 - 381
Target Start/End: Original strand, 4816260 - 4816396
Alignment:
| Q |
247 |
tttgaagttgattctggttttacttatatggtaaggttac--ttttgtgagtttgattgacatataaagaatgcaggtgatacagtttttcatatgttta |
344 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| || | | ||||||| | ||||||| || || | |
|
|
| T |
4816260 |
tttgaagttgattctgcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaaacaggatggtgatagaatttttcagattttca |
4816359 |
T |
|
| Q |
345 |
tagatgatattttggttgaacaatatgctgatgtgat |
381 |
Q |
| |
|
||||||||| ||||| ||||| | |||||||||||| |
|
|
| T |
4816360 |
tagatgatagtttggctgaactttttgctgatgtgat |
4816396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 247 - 381
Target Start/End: Complemental strand, 4636956 - 4636820
Alignment:
| Q |
247 |
tttgaagttgattctggttttacttatatggtaaggttac--ttttgtgagtttgattgacatataaagaatgcaggtgatacagtttttcatatgttta |
344 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| || || |||||||| ||| ||||| || || | |
|
|
| T |
4636956 |
tttgaagttgattctgcttttacttatatggtaaggttacatttttgtgagtttgattggcatatcaactataaaggtgatagagtctttcagatattca |
4636857 |
T |
|
| Q |
345 |
tagatgatattttggttgaacaatatgctgatgtgat |
381 |
Q |
| |
|
||||| | | |||||||||| || | || |||||||| |
|
|
| T |
4636856 |
tagataacactttggttgaagaaaaggcggatgtgat |
4636820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 692 - 852
Target Start/End: Complemental strand, 17245580 - 17245420
Alignment:
| Q |
692 |
caagacgatgcctattggcatcaatgtgctaaagctcactggtacaaggatggcgatagaaatacaaagttttttcatgcatcggcaatagcttggaaaa |
791 |
Q |
| |
|
||||| ||||| ||||||| ||| |||| || |||| ||||||||||||||||||||||| || || |||||||||||||| || | |||| | |||| |
|
|
| T |
17245580 |
caagatgatgcttattggcggcaacgtgcaaagactcattggtacaaggatggcgatagaaacaccaaattttttcatgcatctgctacagctcgtaaaa |
17245481 |
T |
|
| Q |
792 |
aggtaaaccgtataacctctcttgatgatgatgtaggaaataaggttactagtgaacaagg |
852 |
Q |
| |
|
||||||| || || | |||||||| |||||||| || ||||| ||||||| ||| ||||| |
|
|
| T |
17245480 |
aggtaaatcgcattatttctcttgacgatgatgtcggtaataaagttactaatgagcaagg |
17245420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 301
Target Start/End: Complemental strand, 4643772 - 4643714
Alignment:
| Q |
245 |
attttgaagttgattctggttttacttatatggtaaggttac--ttttgtgagtttgat |
301 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
4643772 |
attttgaggttgattctggttttacttatatggtaaggttacatttttgtgagtttgat |
4643714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 245 - 301
Target Start/End: Complemental strand, 4864023 - 4863965
Alignment:
| Q |
245 |
attttgaagttgattctggttttacttatatggtaaggttac--ttttgtgagtttgat |
301 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
4864023 |
attttgaagttgattctaattttacttatatggtaaggttacatttttgtgagtttgat |
4863965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 446 - 504
Target Start/End: Complemental strand, 4630838 - 4630780
Alignment:
| Q |
446 |
tatgtactctccaggaggaaggaatcaaattgaaagagttaatctttcaatcaagcttc |
504 |
Q |
| |
|
||||||||||| || |||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4630838 |
tatgtactctcaagaaggaagctctcaaattgaaagagttaatctttcaatcaagcttc |
4630780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 265 - 388
Target Start/End: Complemental strand, 4653601 - 4653476
Alignment:
| Q |
265 |
tttacttatatggtaaggttac--ttttgtgagtttgattgacatataaagaatgcaggtgatacagtttttcatatgtttatagatgatattttggttg |
362 |
Q |
| |
|
|||||||||||||| ||||||| |||||||| |||||||| | ||| ||| || |||||||| |||||| || || |||||| ||||| | |||| || |
|
|
| T |
4653601 |
tttacttatatggtcaggttacatttttgtgaatttgattggcgtatcaaggataaaggtgatagagttttccagatatttatacatgatttcttggctg |
4653502 |
T |
|
| Q |
363 |
aacaatatgctgatgtgattgcatgg |
388 |
Q |
| |
|
||| | |||||||||||||| ||||| |
|
|
| T |
4653501 |
aaccaaatgctgatgtgatttcatgg |
4653476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 472 - 512
Target Start/End: Original strand, 4846225 - 4846265
Alignment:
| Q |
472 |
aaattgaaagagttaatctttcaatcaagcttcaatgatta |
512 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4846225 |
aaattgaaagagttaatctttcaatcaagcttcaacgatta |
4846265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 245 - 300
Target Start/End: Complemental strand, 4631028 - 4630971
Alignment:
| Q |
245 |
attttgaagttgattctggttttacttatatggtaaggttac--ttttgtgagtttga |
300 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
4631028 |
attttgaagttgattcttcttttacttatatggtaagattacatttttgtgagtttga |
4630971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 470 - 512
Target Start/End: Complemental strand, 4636750 - 4636708
Alignment:
| Q |
470 |
tcaaattgaaagagttaatctttcaatcaagcttcaatgatta |
512 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
4636750 |
tcaaattgaaagagtttatctttcaatcaagcttcaacgatta |
4636708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 470 - 506
Target Start/End: Complemental strand, 4661685 - 4661649
Alignment:
| Q |
470 |
tcaaattgaaagagttaatctttcaatcaagcttcaa |
506 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4661685 |
tcaaattgaaagagttgatctttcaatcaagcttcaa |
4661649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 470 - 506
Target Start/End: Complemental strand, 4666822 - 4666786
Alignment:
| Q |
470 |
tcaaattgaaagagttaatctttcaatcaagcttcaa |
506 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
4666822 |
tcaaattgaaagagttaatctttcaattaagcttcaa |
4666786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 446 - 506
Target Start/End: Complemental strand, 4672587 - 4672527
Alignment:
| Q |
446 |
tatgtactctccaggaggaaggaatcaaattgaaagagttaatctttcaatcaagcttcaa |
506 |
Q |
| |
|
||||||||||| || |||||| |||||||||||||||||||||||| || ||||||||| |
|
|
| T |
4672587 |
tatgtactctcaagaaggaagctctcaaattgaaagagttaatctttctattaagcttcaa |
4672527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 245 - 301
Target Start/End: Original strand, 4697184 - 4697242
Alignment:
| Q |
245 |
attttgaagttgattctggttttacttatatggtaaggtt--acttttgtgagtttgat |
301 |
Q |
| |
|
|||| ||||||||| |||||||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
4697184 |
atttcgaagttgatgttggttttacttatatggtaaggttgcatttttgtgagtttgat |
4697242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 245 - 300
Target Start/End: Complemental strand, 4672777 - 4672720
Alignment:
| Q |
245 |
attttgaagttgattctggttttacttatatggtaaggttac--ttttgtgagtttga |
300 |
Q |
| |
|
||||||| ||||||||| ||| ||||||||||||||||||| |||||||||||||| |
|
|
| T |
4672777 |
attttgaggttgattcttctttcacttatatggtaaggttacatttttgtgagtttga |
4672720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 461 - 502
Target Start/End: Complemental strand, 4653416 - 4653375
Alignment:
| Q |
461 |
aggaaggaatcaaattgaaagagttaatctttcaatcaagct |
502 |
Q |
| |
|
|||||| | |||||||||||||||||||||| |||||||||| |
|
|
| T |
4653416 |
aggaagcactcaaattgaaagagttaatcttacaatcaagct |
4653375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0252 (Bit Score: 165; Significance: 1e-87; HSPs: 1)
Name: scaffold0252
Description:
Target: scaffold0252; HSP #1
Raw Score: 165; E-Value: 1e-87
Query Start/End: Original strand, 606 - 950
Target Start/End: Original strand, 4846 - 5190
Alignment:
| Q |
606 |
aaatgcaagacacacggctgcaagctactagtgaggaccaaacttgcatgtttgagcttaggaaacacttgcaacggctgctgtcccaagacgatgccta |
705 |
Q |
| |
|
||||||||||||||||| |||| ||| || | ||||| |||| | | ||| |||| ||| |||||| ||||||| || ||||||||||||||||||| |
|
|
| T |
4846 |
aaatgcaagacacacggatgcatgcttctggggaggatcaaaatcgtatgcttgaacttcggaaacgtatgcaacgcttgttgtcccaagacgatgccta |
4945 |
T |
|
| Q |
706 |
ttggcatcaatgtgctaaagctcactggtacaaggatggcgatagaaatacaaagttttttcatgcatcggcaatagcttggaaaaaggtaaaccgtata |
805 |
Q |
| |
|
||||| |||| |||||||| ||||||||||||||||||| ||||||||||| |||||||||||||| ||||||| ||| |||||||||||||| |||||| |
|
|
| T |
4946 |
ttggcgtcaacgtgctaaaactcactggtacaaggatggtgatagaaatacgaagttttttcatgcctcggcaacagcctggaaaaaggtaaatcgtata |
5045 |
T |
|
| Q |
806 |
acctctcttgatgatgatgtaggaaataaggttactagtgaacaaggtttgcaagaagtagtacggaattattttgaaaatatttttcaacagcaggata |
905 |
Q |
| |
|
|| |||||||||||||| || || ||||| |||||||||||||| |||||||||||| ||| || |||||||||| |||||||||||||| || ||| |
|
|
| T |
5046 |
acatctcttgatgatgacgttggtaataaagttactagtgaacatggtttgcaagaaatagcgcgaaattattttgtgaatatttttcaacaacaaaata |
5145 |
T |
|
| Q |
906 |
gtgatttttcttctgtcatagatgttattaatccgtctatctctg |
950 |
Q |
| |
|
|||||||||||||||| ||||||||||| ||| |||||||||||| |
|
|
| T |
5146 |
gtgatttttcttctgttatagatgttataaattcgtctatctctg |
5190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 153; Significance: 1e-80; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 606 - 950
Target Start/End: Original strand, 25101607 - 25101951
Alignment:
| Q |
606 |
aaatgcaagacacacggctgcaagctactagtgaggaccaaacttgcatgtttgagcttaggaaacacttgcaacggctgctgtcccaagacgatgccta |
705 |
Q |
| |
|
|||||||||||| ||| ||| | ||| || | |||||||||| ||||| |||| ||||||||| | ||||| | | ||||||||||||||||||| |
|
|
| T |
25101607 |
aaatgcaagacaaacgactgtatgcttctggggaggaccaaaaccgcatgcttgaccttaggaaatgcatgcaaagcttaatgtcccaagacgatgccta |
25101706 |
T |
|
| Q |
706 |
ttggcatcaatgtgctaaagctcactggtacaaggatggcgatagaaatacaaagttttttcatgcatcggcaatagcttggaaaaaggtaaaccgtata |
805 |
Q |
| |
|
||||| |||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||| ||| ||| |||||||||||||| ||||| |
|
|
| T |
25101707 |
ttggcgtcaacgtgctaaagctcactggtataaggatggcgacagaaatacaaagttttttcatgcctcgacaacagcccggaaaaaggtaaactgtata |
25101806 |
T |
|
| Q |
806 |
acctctcttgatgatgatgtaggaaataaggttactagtgaacaaggtttgcaagaagtagtacggaattattttgaaaatatttttcaacagcaggata |
905 |
Q |
| |
|
||||| ||| ||||||||| ||| |||| ||||| ||||||||||||||||| ||||||| ||||||||||||| ||||||||||| || || ||| |
|
|
| T |
25101807 |
acctcccttcatgatgatgcaggtaatacagttacaagtgaacaaggtttgcaggaagtagcgcggaattattttgtgaatatttttcagcaacataata |
25101906 |
T |
|
| Q |
906 |
gtgatttttcttctgtcatagatgttattaatccgtctatctctg |
950 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
25101907 |
gtgatttttcttctgtcatagatgttattaatccgtttgtctctg |
25101951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 698 - 834
Target Start/End: Original strand, 23378308 - 23378444
Alignment:
| Q |
698 |
gatgcctattggcatcaatgtgctaaagct-cactggtacaaggatggcgatagaaatacaaagttttttcatgcatcggcaatagcttggaaaaaggta |
796 |
Q |
| |
|
|||||||||||||| ||| |||| |||| | || |||||||||||||| |||||||||||||| ||| |||||||| | ||||| | || |||||| |
|
|
| T |
23378308 |
gatgcctattggcaacaacgtgc-aaagatacattggtacaaggatggtgatagaaatacaaaaaatttccatgcatccgttttagctcgaaagaaggta |
23378406 |
T |
|
| Q |
797 |
aaccgtataacctctcttgatgatgatgtaggaaataa |
834 |
Q |
| |
|
|| || || | |||||||| ||||||||||| ||||| |
|
|
| T |
23378407 |
aatcgcattatttctcttgacgatgatgtaggtaataa |
23378444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 129; Significance: 3e-66; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 638 - 952
Target Start/End: Original strand, 8562975 - 8563286
Alignment:
| Q |
638 |
gaggaccaaacttgcatgtttgagcttaggaaacacttgcaacggctgctgtcccaagacgatgcctattggcatcaatgtgctaaagctcactggtaca |
737 |
Q |
| |
|
||||| |||||| ||||| |||||||| |||||| ||||||| |||| |||||||||||||||||||||| |||| |||||||| |||||| ||| | |
|
|
| T |
8562975 |
gaggatcaaactcgcatggttgagcttcggaaacgtatgcaacgattgctatcccaagacgatgcctattggcgtcaacgtgctaaaactcactagtata |
8563074 |
T |
|
| Q |
738 |
aggatggcgatagaaatacaaagttttttcatgcatcggcaatagcttggaaaaaggtaaaccgtataacctctcttgatgatgatgtaggaaataaggt |
837 |
Q |
| |
|
||||||| || ||||||||||||||||||||||| ||||||| | || |||| |||||||| || |||| ||||||||| ||||| | || |||| || |
|
|
| T |
8563075 |
aggatggtgacagaaatacaaagttttttcatgcctcggcaacaactcggaagaaggtaaatcgcataaactctcttgacgatgacggtggtcataaagt |
8563174 |
T |
|
| Q |
838 |
tactagtgaacaaggtttgcaagaagtagtacggaattattttgaaaatatttttcaacagcaggatagtgatttttcttctgtcatagatgttattaat |
937 |
Q |
| |
|
||||| |||||| |||||||||||||||| || ||||| |||| |||||||||||| ||| ||||||||||||||||||| ||||||||||| ||| |
|
|
| T |
8563175 |
tactaatgaacatggtttgcaagaagtagcgcgtaattactttgtgaatatttttcaa---cagaatagtgatttttcttctgttatagatgttataaat |
8563271 |
T |
|
| Q |
938 |
ccgtctatctctgct |
952 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
8563272 |
ccgtctatctctgct |
8563286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 675 - 943
Target Start/End: Original strand, 17783823 - 17784095
Alignment:
| Q |
675 |
tgcaacggctgctgtcccaagacgatgcctatt----ggcatcaatgtgctaaagctcactggtacaaggatggcgatagaaatacaaagttttttcatg |
770 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||| ||| |||| || ||| | || ||||| ||||||||||| | ||||| |||||||||||| |
|
|
| T |
17783823 |
tgcaacggctgctgtcccaagatgatgcttattaattggcgtcaacacgcaaaaacccattggtataaggatggcgaccgtaatacctagttttttcatg |
17783922 |
T |
|
| Q |
771 |
catcggcaatagcttggaaaaaggtaaaccgtataacctctcttgatgatgatgtaggaaataaggttactagtgaacaaggtttgcaagaagtagtacg |
870 |
Q |
| |
|
| ||||||| ||| | || |||||||| ||||||||||||||||||||||||| ||| ||||| |||||| ||| || | | ||||||| || | | | |
|
|
| T |
17783923 |
cttcggcaacggctcgaaagaaggtaaatcgtataacctctcttgatgatgatgcaggtaataaaattactaatgagcaggatatgcaagacgtggcaag |
17784022 |
T |
|
| Q |
871 |
gaattattttgaaaatatttttcaacagcaggatagtgatttttcttctgtcatagatgttattaatccgtct |
943 |
Q |
| |
|
||| ||||||| ||||||||||||||| ||| ||||||||| |||||| || || |||||||||||||||||| |
|
|
| T |
17784023 |
gaaatattttgtaaatatttttcaacaacagaatagtgattcttcttccgttattgatgttattaatccgtct |
17784095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 675 - 943
Target Start/End: Original strand, 19085342 - 19085614
Alignment:
| Q |
675 |
tgcaacggctgctgtcccaagacgatgcctatt----ggcatcaatgtgctaaagctcactggtacaaggatggcgatagaaatacaaagttttttcatg |
770 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||| ||| |||| || ||| | || ||||| ||||||||||| | ||||| |||||||||||| |
|
|
| T |
19085342 |
tgcaacggctgctgtcccaagatgatgcttattaattggcgtcaacacgcaaaaacccattggtataaggatggcgaccgtaatacctagttttttcatg |
19085441 |
T |
|
| Q |
771 |
catcggcaatagcttggaaaaaggtaaaccgtataacctctcttgatgatgatgtaggaaataaggttactagtgaacaaggtttgcaagaagtagtacg |
870 |
Q |
| |
|
| ||||||| ||| | || |||||||| ||||||||||||||||||||||||| ||| ||||| |||||| ||| || | | ||||||| || | | | |
|
|
| T |
19085442 |
cttcggcaacggctcgaaagaaggtaaatcgtataacctctcttgatgatgatgcaggtaataaaattactaatgagcaggatatgcaagacgtggcaag |
19085541 |
T |
|
| Q |
871 |
gaattattttgaaaatatttttcaacagcaggatagtgatttttcttctgtcatagatgttattaatccgtct |
943 |
Q |
| |
|
||| ||||||| ||||||||||||||| ||| ||||||||| |||||| || || |||||||||||||||||| |
|
|
| T |
19085542 |
gaaatattttgtaaatatttttcaacaacagaatagtgattcttcttccgttattgatgttattaatccgtct |
19085614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 675 - 943
Target Start/End: Original strand, 19092450 - 19092722
Alignment:
| Q |
675 |
tgcaacggctgctgtcccaagacgatgcctatt----ggcatcaatgtgctaaagctcactggtacaaggatggcgatagaaatacaaagttttttcatg |
770 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||| ||| |||| || ||| | || ||||| ||||||||||| | ||||| |||||||||||| |
|
|
| T |
19092450 |
tgcaacggctgctgtcccaagatgatgcttattaattggcgtcaacacgcaaaaacccattggtataaggatggcgaccgtaatacctagttttttcatg |
19092549 |
T |
|
| Q |
771 |
catcggcaatagcttggaaaaaggtaaaccgtataacctctcttgatgatgatgtaggaaataaggttactagtgaacaaggtttgcaagaagtagtacg |
870 |
Q |
| |
|
| ||||||| ||| | || |||||||| ||||||||||||||||||||||||| ||| ||||| |||||| ||| || | | ||||||| || | | | |
|
|
| T |
19092550 |
cttcggcaacggctcgaaagaaggtaaatcgtataacctctcttgatgatgatgcaggtaataaaattactaatgagcaggatatgcaagacgtggcaag |
19092649 |
T |
|
| Q |
871 |
gaattattttgaaaatatttttcaacagcaggatagtgatttttcttctgtcatagatgttattaatccgtct |
943 |
Q |
| |
|
||| ||||||| ||||||||||||||| ||| ||||||||| |||||| || || |||||||||||||||||| |
|
|
| T |
19092650 |
gaaatattttgtaaatatttttcaacaacagaatagtgattcttcttccgttattgatgttattaatccgtct |
19092722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 638 - 943
Target Start/End: Complemental strand, 6009199 - 6008894
Alignment:
| Q |
638 |
gaggaccaaacttgcatgtttgagcttaggaaacacttgcaacggctgctgtcccaagacgatgcctattggcatcaatgtgctaaagctcactggtaca |
737 |
Q |
| |
|
||||||||| | ||||||| ||||| |||||| |||||||||||||||||||||| ||||| ||||||| |||| | || ||| | || ||||| | |
|
|
| T |
6009199 |
gaggaccaagttcgcatgttcgagctaaggaaaagaatgcaacggctgctgtcccaagatgatgcttattggcgtcaacgcgcaaaaacccattggtata |
6009100 |
T |
|
| Q |
738 |
aggatggcgatagaaatacaaagttttttcatgcatcggcaatagcttggaaaaaggtaaaccgtataacctctcttgatgatgatgtaggaaataaggt |
837 |
Q |
| |
|
|| |||| || | ||||| ||||||||||| || ||||||| ||| | || |||||||| |||||||| |||||||||||||||| || ||||| | |
|
|
| T |
6009099 |
agtatggtgaccgtaataccaagttttttcacgcttcggcaacggctcgaaagaaggtaaatcgtataacttctcttgatgatgatgcgggtaataaaat |
6009000 |
T |
|
| Q |
838 |
tactagtgaacaaggtttgcaagaagtagtacggaattattttgaaaatatttttcaacagcaggatagtgatttttcttctgtcatagatgttattaat |
937 |
Q |
| |
|
||||| ||| || | | |||||||||| | | | | ||||||| ||||||||||||||| ||| ||||||||| |||||| || || |||||||||||| |
|
|
| T |
6008999 |
tactaatgagcaggatatgcaagaagtggcaagacaatattttgtaaatatttttcaacaacagaatagtgattcttcttccgttattgatgttattaat |
6008900 |
T |
|
| Q |
938 |
ccgtct |
943 |
Q |
| |
|
|||||| |
|
|
| T |
6008899 |
ccgtct |
6008894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 81; Significance: 1e-37; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 638 - 950
Target Start/End: Original strand, 14502697 - 14503009
Alignment:
| Q |
638 |
gaggaccaaacttgcatgtttgagcttaggaaacacttgcaacggctgctgtcccaagacgatgcctattggcatcaatgtgctaaagctcactggtaca |
737 |
Q |
| |
|
||||||||| | ||||||| ||||| |||||| |||||||||||||||||||||| ||||| ||||||| |||| | || ||| | || ||||| | |
|
|
| T |
14502697 |
gaggaccaagttcgcatgttcgagctaaggaaaagaatgcaacggctgctgtcccaagatgatgcttattggcgtcaacgcgcaaaaacccattggtata |
14502796 |
T |
|
| Q |
738 |
aggatggcgatagaaatacaaagttttttcatgcatcggcaatagcttggaaaaaggtaaaccgtataacctctcttgatgatgatgtaggaaataaggt |
837 |
Q |
| |
|
|||||||||| | ||||| ||||||||||| || ||||| | ||| | || |||||||| |||||||| |||||||||||||||| || ||||| | |
|
|
| T |
14502797 |
aggatggcgaccgtaataccaagttttttcacgcttcggctacggctcgaaagaaggtaaatcgtataacttctcttgatgatgatgcgggtaataaaat |
14502896 |
T |
|
| Q |
838 |
tactagtgaacaaggtttgcaagaagtagtacggaattattttgaaaatatttttcaacagcaggatagtgatttttcttctgtcatagatgttattaat |
937 |
Q |
| |
|
||||| ||| || | | |||||||||| | | | | ||||||| ||||||||||||||| || ||||||||| |||||| || || |||||||||||| |
|
|
| T |
14502897 |
tactaatgagcaggatatgcaagaagtggcaagacaatattttgtaaatatttttcaacaacataatagtgattcttcttccgttattgatgttattaat |
14502996 |
T |
|
| Q |
938 |
ccgtctatctctg |
950 |
Q |
| |
|
|||||||| |||| |
|
|
| T |
14502997 |
ccgtctatttctg |
14503009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 636 - 939
Target Start/End: Complemental strand, 15993585 - 15993282
Alignment:
| Q |
636 |
gtgaggaccaaacttgcatgtttgagcttaggaaacacttgcaacggctgctgtcccaagacgatgcctattggcatcaatgtgctaaagctcactggta |
735 |
Q |
| |
|
||||||||||| | ||||||| ||||| |||||| |||||||||||||||||||||| ||||| ||||||| |||| | || ||| | || ||||| |
|
|
| T |
15993585 |
gtgaggaccaagttcgcatgttcgagctaaggaaaagaatgcaacggctgctgtcccaagatgatgcttattggcgtcaacgcgcaaaaacccattggta |
15993486 |
T |
|
| Q |
736 |
caaggatggcgatagaaatacaaagttttttcatgcatcggcaatagcttggaaaaaggtaaaccgtataacctctcttgatgatgatgtaggaaataag |
835 |
Q |
| |
|
||||||||||| | ||||| ||||||||||| || ||||| | ||| | || |||||||| |||||||| |||||||||||||||| || ||||| |
|
|
| T |
15993485 |
taaggatggcgaccgtaataccaagttttttcacgcttcggctacggctcgaaagaaggtaaatcgtataacttctcttgatgatgatgcgggtaataaa |
15993386 |
T |
|
| Q |
836 |
gttactagtgaacaaggtttgcaagaagtagtacggaattattttgaaaatatttttcaacagcaggatagtgatttttcttctgtcatagatgttatta |
935 |
Q |
| |
|
|||||| ||| || | | |||||||||| | | | | ||||||| ||||||||||||||| ||| ||||||||| |||||| || || |||||||||| |
|
|
| T |
15993385 |
attactaatgagcaggatatgcaagaagtggcaagtcaatattttgtaaatatttttcaacaacagaatagtgattcttcttccgttattgatgttatta |
15993286 |
T |
|
| Q |
936 |
atcc |
939 |
Q |
| |
|
|||| |
|
|
| T |
15993285 |
atcc |
15993282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 81; Significance: 1e-37; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 638 - 950
Target Start/End: Original strand, 22289352 - 22289664
Alignment:
| Q |
638 |
gaggaccaaacttgcatgtttgagcttaggaaacacttgcaacggctgctgtcccaagacgatgcctattggcatcaatgtgctaaagctcactggtaca |
737 |
Q |
| |
|
||||||||| | ||||||| ||||| |||||| |||||||||||||||||||||| ||||| ||||||| |||| | || ||| | || ||||| | |
|
|
| T |
22289352 |
gaggaccaagttcgcatgttcgagctaaggaaaagaatgcaacggctgctgtcccaagatgatgcttattggcgtcaacgcgcaaaaacccattggtata |
22289451 |
T |
|
| Q |
738 |
aggatggcgatagaaatacaaagttttttcatgcatcggcaatagcttggaaaaaggtaaaccgtataacctctcttgatgatgatgtaggaaataaggt |
837 |
Q |
| |
|
|||||||||| | ||||| ||||||||||| || ||||| | ||| | || |||||||| |||||||| |||||||||||||||| || ||||| | |
|
|
| T |
22289452 |
aggatggcgaccgtaataccaagttttttcacgcttcggctacggctcgaaagaaggtaaatcgtataacttctcttgatgatgatgcgggtaataaaat |
22289551 |
T |
|
| Q |
838 |
tactagtgaacaaggtttgcaagaagtagtacggaattattttgaaaatatttttcaacagcaggatagtgatttttcttctgtcatagatgttattaat |
937 |
Q |
| |
|
||||| ||| || | | |||||||||| | | | | ||||||| ||||||||||||||| || ||||||||| |||||| || || |||||||||||| |
|
|
| T |
22289552 |
tactaatgagcaggatatgcaagaagtggcaagacaatattttgtaaatatttttcaacaacataatagtgattcttcttccgttattgatgttattaat |
22289651 |
T |
|
| Q |
938 |
ccgtctatctctg |
950 |
Q |
| |
|
|||||||| |||| |
|
|
| T |
22289652 |
ccgtctatttctg |
22289664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 636 - 943
Target Start/End: Original strand, 28243619 - 28243926
Alignment:
| Q |
636 |
gtgaggaccaaacttgcatgtttgagcttaggaaacacttgcaacggctgctgtcccaagacgatgcctattggcatcaatgtgctaaagctcactggta |
735 |
Q |
| |
|
||||||||||| | ||||||| ||||| |||||| |||||||||| ||||||||| | ||||| ||||||| |||| ||| ||| |||| ||||| |
|
|
| T |
28243619 |
gtgaggaccaagttcgcatgttcgagctaaggaaaagaatgcaacggctactgtcccaatatgatgcttattggcttcaacatgcaaaaactcattggta |
28243718 |
T |
|
| Q |
736 |
caaggatggcgatagaaatacaaagttttttcatgcatcggcaatagcttggaaaaaggtaaaccgtataacctctcttgatgatgatgtaggaaataag |
835 |
Q |
| |
|
|||||||| | | ||||| ||||||||||| || ||||| | |||||| || |||||||| | |||||||||||||||||||| || | ||||| |
|
|
| T |
28243719 |
taaggatggtaaccgtaataccaagttttttcacgcttcggctacagcttgaaagaaggtaaatcttataacctctcttgatgatggtgctagtaataaa |
28243818 |
T |
|
| Q |
836 |
gttactagtgaacaaggtttgcaagaagtagtacggaattattttgaaaatatttttcaacagcaggatagtgatttttcttctgtcatagatgttatta |
935 |
Q |
| |
|
|||||| ||| || | | |||||||||| ||| || | ||||||| ||||||||||||||| || |||||||| ||||||| || || |||||||||| |
|
|
| T |
28243819 |
attactaatgagcaggatatgcaagaagtggtaaggcaatattttgtaaatatttttcaacaacaaaatagtgatctttcttccgttattgatgttatta |
28243918 |
T |
|
| Q |
936 |
atccgtct |
943 |
Q |
| |
|
|||||||| |
|
|
| T |
28243919 |
atccgtct |
28243926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 65; Significance: 4e-28; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 245 - 382
Target Start/End: Original strand, 18925736 - 18925875
Alignment:
| Q |
245 |
attttgaagttgattctggttttacttatatggtaaggttac--ttttgtgagtttgattgacatataaagaatgcaggtgatacagtttttcatatgtt |
342 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||||||| || | ||||| ||||||||||| |||||||||||| |||||||| ||||||||| || || |
|
|
| T |
18925736 |
attttgaagttgattctgcctttacttatttggtaagattgcatttttgcgagtttgattggcatataaagaatcaaggtgatagagtttttcagatttt |
18925835 |
T |
|
| Q |
343 |
tatagatgatattttggttgaacaatatgctgatgtgatt |
382 |
Q |
| |
|
||||||||||| ||||| ||||| | |||||||||||||| |
|
|
| T |
18925836 |
tatagatgataatttggctgaacgaaatgctgatgtgatt |
18925875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 675 - 804
Target Start/End: Original strand, 26904527 - 26904656
Alignment:
| Q |
675 |
tgcaacggctgctgtcccaagacgatgcctattggcatcaatgtgctaaagctcactggtacaaggatggcgatagaaatacaaagttttttcatgcatc |
774 |
Q |
| |
|
|||||||||| |||||||||| ||||||||||||| ||| ||||||| |||| |||||||||||||| ||| |||||||||| || ||||||| ||| |
|
|
| T |
26904527 |
tgcaacggcttttgtcccaagatgatgcctattggcgacaacgtgctaagactcattggtacaaggatggtgatcgaaatacaaaattctttcatgtatc |
26904626 |
T |
|
| Q |
775 |
ggcaatagcttggaaaaaggtaaaccgtat |
804 |
Q |
| |
|
|| ||||||||| |||||||| ||||| |
|
|
| T |
26904627 |
tgcttcagcttggaagaaggtaaatcgtat |
26904656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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