View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8960_low_5 (Length: 453)

Name: NF8960_low_5
Description: NF8960
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8960_low_5
NF8960_low_5
[»] chr1 (80 HSPs)
chr1 (16-247)||(9228767-9228998)
chr1 (286-453)||(27336782-27336951)
chr1 (283-453)||(28206909-28207079)
chr1 (283-452)||(27338970-27339141)
chr1 (304-453)||(39462789-39462938)
chr1 (304-453)||(50307407-50307557)
chr1 (304-453)||(15823816-15823966)
chr1 (286-453)||(2949079-2949243)
chr1 (304-453)||(47906540-47906686)
chr1 (101-263)||(9228704-9228866)
chr1 (291-453)||(25251126-25251285)
chr1 (308-453)||(12302373-12302516)
chr1 (304-453)||(23816156-23816305)
chr1 (308-453)||(14097837-14097980)
chr1 (284-453)||(41647190-41647357)
chr1 (286-453)||(50248417-50248581)
chr1 (284-451)||(38925326-38925490)
chr1 (304-452)||(6995558-6995710)
chr1 (286-451)||(13215358-13215518)
chr1 (283-453)||(28998091-28998264)
chr1 (283-453)||(29003807-29003980)
chr1 (304-452)||(11457340-11457485)
chr1 (292-451)||(18307381-18307537)
chr1 (304-429)||(50078654-50078779)
chr1 (307-451)||(4131243-4131384)
chr1 (308-407)||(3579452-3579550)
chr1 (283-453)||(16429228-16429390)
chr1 (284-421)||(25860250-25860383)
chr1 (304-429)||(47451923-47452047)
chr1 (308-421)||(2617824-2617934)
chr1 (304-453)||(18839858-18840004)
chr1 (304-453)||(31424880-31425026)
chr1 (306-453)||(10399690-10399839)
chr1 (286-448)||(40134220-40134378)
chr1 (304-453)||(51750309-51750459)
chr1 (283-409)||(16226487-16226610)
chr1 (286-453)||(17319157-17319321)
chr1 (304-448)||(9240952-9241091)
chr1 (304-450)||(31490185-31490327)
chr1 (304-453)||(13447134-13447284)
chr1 (304-453)||(13762106-13762256)
chr1 (304-453)||(15294695-15294845)
chr1 (286-405)||(39932398-39932514)
chr1 (286-453)||(25248398-25248562)
chr1 (283-409)||(47177681-47177804)
chr1 (329-453)||(50076563-50076683)
chr1 (310-407)||(17324388-17324484)
chr1 (304-409)||(20291775-20291877)
chr1 (286-409)||(16231882-16232002)
chr1 (304-453)||(17185997-17186138)
chr1 (307-453)||(17324500-17324647)
chr1 (304-453)||(31422724-31422871)
chr1 (304-453)||(13358843-13358994)
chr1 (304-409)||(20302760-20302862)
chr1 (304-409)||(47180032-47180134)
chr1 (286-409)||(9459277-9459396)
chr1 (286-409)||(9463104-9463223)
chr1 (326-451)||(16428926-16429044)
chr1 (313-453)||(25128143-25128280)
chr1 (292-453)||(31735371-31735532)
chr1 (304-453)||(46431566-46431717)
chr1 (283-401)||(51757862-51757976)
chr1 (286-409)||(23786158-23786278)
chr1 (286-406)||(30780361-30780482)
chr1 (286-409)||(2510184-2510304)
chr1 (304-401)||(51752696-51752788)
chr1 (321-453)||(28840949-28841083)
chr1 (286-381)||(24326008-24326101)
chr1 (304-409)||(28842813-28842914)
chr1 (304-453)||(6114971-6115113)
chr1 (286-405)||(15916706-15916821)
chr1 (304-409)||(14183472-14183573)
chr1 (304-409)||(18800440-18800542)
chr1 (304-452)||(16432667-16432803)
chr1 (283-408)||(8348902-8349021)
chr1 (419-453)||(3579594-3579628)
chr1 (370-450)||(6756801-6756877)
chr1 (304-375)||(30790267-30790337)
chr1 (304-406)||(16561781-16561877)
chr1 (304-375)||(26519306-26519373)
[»] scaffold0031 (1 HSPs)
scaffold0031 (304-453)||(79464-79613)
[»] chr3 (85 HSPs)
chr3 (304-453)||(32219335-32219484)
chr3 (286-453)||(24979958-24980126)
chr3 (304-452)||(18096758-18096906)
chr3 (283-451)||(18162915-18163083)
chr3 (283-453)||(18099007-18099177)
chr3 (306-450)||(27101043-27101185)
chr3 (283-453)||(3314935-3315103)
chr3 (307-453)||(25688021-25688167)
chr3 (304-450)||(36012080-36012225)
chr3 (304-453)||(53917524-53917671)
chr3 (306-453)||(4308143-4308288)
chr3 (304-453)||(53915356-53915503)
chr3 (303-450)||(43228544-43228688)
chr3 (304-453)||(27635516-27635665)
chr3 (304-453)||(45883190-45883339)
chr3 (307-453)||(1313659-1313800)
chr3 (283-453)||(43423305-43423470)
chr3 (304-453)||(5886448-5886598)
chr3 (304-453)||(5899921-5900071)
chr3 (304-453)||(880314-880458)
chr3 (304-452)||(9604465-9604613)
chr3 (304-453)||(42990554-42990700)
chr3 (304-453)||(1321729-1321880)
chr3 (283-453)||(43226335-43226498)
chr3 (304-453)||(6484610-6484755)
chr3 (304-453)||(12267837-12267982)
chr3 (304-444)||(32263899-32264036)
chr3 (304-453)||(43421278-43421422)
chr3 (285-452)||(54691416-54691580)
chr3 (283-452)||(28101845-28102008)
chr3 (308-452)||(1626548-1626689)
chr3 (304-452)||(11168352-11168502)
chr3 (307-452)||(880106-880246)
chr3 (286-448)||(3307015-3307176)
chr3 (286-453)||(15781129-15781293)
chr3 (275-453)||(38890290-38890471)
chr3 (304-453)||(41849309-41849453)
chr3 (313-453)||(48361538-48361678)
chr3 (304-452)||(28181255-28181399)
chr3 (315-453)||(51943620-51943758)
chr3 (304-453)||(10955884-10956034)
chr3 (308-453)||(53468318-53468460)
chr3 (304-450)||(4666767-4666910)
chr3 (304-452)||(51674627-51674772)
chr3 (286-409)||(747057-747177)
chr3 (304-408)||(5191951-5192051)
chr3 (286-409)||(28761287-28761406)
chr3 (304-452)||(51726864-51727013)
chr3 (304-409)||(10084246-10084347)
chr3 (304-409)||(10191169-10191270)
chr3 (283-409)||(6065630-6065753)
chr3 (321-408)||(11170670-11170755)
chr3 (307-453)||(5926630-5926771)
chr3 (304-453)||(6232050-6232191)
chr3 (283-409)||(10958160-10958281)
chr3 (304-453)||(5522483-5522634)
chr3 (286-448)||(17795514-17795669)
chr3 (286-448)||(19103954-19104109)
chr3 (363-452)||(39715716-39715804)
chr3 (340-452)||(47148792-47148901)
chr3 (282-409)||(25533724-25533846)
chr3 (304-405)||(22114160-22114258)
chr3 (285-407)||(53591477-53591598)
chr3 (277-409)||(458584-458711)
chr3 (342-453)||(8183035-8183141)
chr3 (304-405)||(53893911-53894009)
chr3 (321-412)||(7606476-7606566)
chr3 (283-409)||(10621363-10621487)
chr3 (393-453)||(30006091-30006151)
chr3 (283-409)||(456207-456328)
chr3 (286-409)||(50494298-50494417)
chr3 (304-409)||(25389205-25389307)
chr3 (304-408)||(47701538-47701638)
chr3 (283-453)||(23633703-23633865)
chr3 (336-405)||(35919018-35919085)
chr3 (327-405)||(26720850-26720925)
chr3 (286-409)||(38210670-38210789)
chr3 (304-375)||(42992712-42992782)
chr3 (307-409)||(3859809-3859908)
chr3 (304-409)||(6063301-6063403)
chr3 (285-453)||(31151595-31151755)
chr3 (304-407)||(561641-561739)
chr3 (284-409)||(28412868-28412988)
chr3 (387-453)||(42992520-42992586)
chr3 (283-409)||(53597528-53597647)
[»] chr5 (67 HSPs)
chr5 (304-452)||(36402188-36402336)
chr5 (308-452)||(2818199-2818343)
chr5 (304-452)||(39854754-39854903)
chr5 (288-453)||(16776427-16776592)
chr5 (304-453)||(2724163-2724309)
chr5 (283-452)||(18511053-18511220)
chr5 (283-453)||(6745338-6745510)
chr5 (303-453)||(6747574-6747726)
chr5 (285-453)||(24127126-24127292)
chr5 (304-453)||(658221-658365)
chr5 (283-453)||(20505684-20505852)
chr5 (308-453)||(17818357-17818501)
chr5 (327-452)||(18509203-18509326)
chr5 (304-452)||(31465851-31465997)
chr5 (307-451)||(26098152-26098295)
chr5 (284-409)||(36208885-36209009)
chr5 (284-409)||(41585578-41585702)
chr5 (292-453)||(21948296-21948462)
chr5 (304-453)||(40221793-40221945)
chr5 (302-453)||(1189468-1189616)
chr5 (286-453)||(2954686-2954849)
chr5 (309-453)||(17073154-17073298)
chr5 (292-451)||(6756764-6756921)
chr5 (304-452)||(10474186-10474331)
chr5 (285-453)||(25921314-25921482)
chr5 (307-409)||(12555779-12555880)
chr5 (304-409)||(10528956-10529058)
chr5 (303-453)||(20043260-20043407)
chr5 (327-453)||(26098001-26098124)
chr5 (304-409)||(34476911-34477013)
chr5 (304-453)||(34479276-34479427)
chr5 (304-453)||(21289031-21289175)
chr5 (304-453)||(18596916-18597061)
chr5 (286-409)||(3372977-3373097)
chr5 (292-452)||(25904374-25904530)
chr5 (304-409)||(10750018-10750120)
chr5 (304-409)||(10757494-10757596)
chr5 (286-450)||(16092045-16092205)
chr5 (286-407)||(34530559-34530679)
chr5 (286-409)||(18469328-18469448)
chr5 (283-409)||(18467003-18467126)
chr5 (311-409)||(20045298-20045395)
chr5 (304-409)||(38882407-38882508)
chr5 (308-452)||(37705649-37705788)
chr5 (286-409)||(4236947-4237065)
chr5 (306-409)||(25804343-25804442)
chr5 (307-409)||(2175220-2175318)
chr5 (291-453)||(27912806-27912970)
chr5 (304-409)||(21684311-21684412)
chr5 (283-409)||(27910752-27910875)
chr5 (304-409)||(10587134-10587235)
chr5 (304-409)||(38959990-38960091)
chr5 (304-453)||(696148-696291)
chr5 (283-405)||(15356687-15356806)
chr5 (283-405)||(23665368-23665487)
chr5 (283-405)||(23793100-23793219)
chr5 (286-403)||(31179213-31179326)
chr5 (304-409)||(39798349-39798450)
chr5 (304-407)||(4410343-4410441)
chr5 (304-405)||(15354432-15354530)
chr5 (304-405)||(23741715-23741813)
chr5 (305-409)||(31543053-31543153)
chr5 (304-409)||(6661054-6661155)
chr5 (352-407)||(39397916-39397970)
chr5 (286-339)||(20437195-20437249)
chr5 (283-339)||(10627641-10627698)
chr5 (305-409)||(31545402-31545502)
[»] chr7 (67 HSPs)
chr7 (282-453)||(13099313-13099483)
chr7 (303-453)||(9679339-9679487)
chr7 (311-453)||(21990430-21990570)
chr7 (304-453)||(11355538-11355686)
chr7 (289-453)||(22251433-22251594)
chr7 (303-453)||(26804790-26804938)
chr7 (292-453)||(27306082-27306239)
chr7 (292-453)||(42330852-42331006)
chr7 (285-453)||(443876-444045)
chr7 (304-453)||(31434911-31435055)
chr7 (283-453)||(44724859-44725025)
chr7 (315-453)||(21592018-21592152)
chr7 (303-452)||(9681101-9681248)
chr7 (304-453)||(20626318-20626463)
chr7 (304-453)||(20630209-20630354)
chr7 (304-453)||(20642628-20642773)
chr7 (307-409)||(37411988-37412089)
chr7 (283-453)||(38394266-38394437)
chr7 (283-407)||(21678386-21678509)
chr7 (304-453)||(4295799-4295943)
chr7 (285-453)||(18345821-18345990)
chr7 (308-453)||(21680310-21680450)
chr7 (308-453)||(42223438-42223578)
chr7 (311-453)||(39145856-39145995)
chr7 (292-453)||(1850261-1850423)
chr7 (283-409)||(20297691-20297813)
chr7 (304-409)||(7471839-7471940)
chr7 (283-453)||(28485845-28486016)
chr7 (304-453)||(40836602-40836752)
chr7 (292-453)||(44844-45006)
chr7 (303-408)||(35959-36060)
chr7 (291-453)||(3036004-3036167)
chr7 (304-409)||(11759456-11759557)
chr7 (304-409)||(20299789-20299890)
chr7 (285-435)||(24465832-24465976)
chr7 (304-409)||(28487882-28487983)
chr7 (283-451)||(24748877-24749038)
chr7 (304-453)||(48457933-48458083)
chr7 (286-409)||(25542857-25542976)
chr7 (304-409)||(7094318-7094420)
chr7 (304-408)||(7092071-7092172)
chr7 (286-409)||(1606708-1606827)
chr7 (285-407)||(27832487-27832606)
chr7 (304-409)||(9027052-9027153)
chr7 (292-405)||(3878911-3879021)
chr7 (304-405)||(38396972-38397069)
chr7 (310-453)||(22394003-22394137)
chr7 (283-405)||(40550161-40550280)
chr7 (304-409)||(7469882-7469982)
chr7 (304-405)||(43253375-43253472)
chr7 (321-405)||(40946663-40946744)
chr7 (304-409)||(2935597-2935699)
chr7 (304-409)||(7351510-7351611)
chr7 (304-409)||(26295766-26295867)
chr7 (304-405)||(22137411-22137509)
chr7 (304-405)||(40552438-40552536)
chr7 (304-407)||(7188861-7188960)
chr7 (321-405)||(22108401-22108483)
chr7 (304-453)||(24813365-24813506)
chr7 (304-409)||(7349136-7349236)
chr7 (283-339)||(44016511-44016568)
chr7 (304-360)||(1046776-1046831)
chr7 (304-360)||(20137010-20137066)
chr7 (392-453)||(20137061-20137118)
chr7 (307-372)||(1049151-1049216)
chr7 (304-349)||(24817220-24817265)
chr7 (304-448)||(25276415-25276548)
[»] scaffold0004 (1 HSPs)
scaffold0004 (283-453)||(80138-80308)
[»] chr4 (86 HSPs)
chr4 (283-452)||(22802574-22802742)
chr4 (292-453)||(40637398-40637560)
chr4 (306-453)||(24889120-24889265)
chr4 (304-451)||(52942348-52942495)
chr4 (304-453)||(22800723-22800871)
chr4 (283-453)||(36921335-36921502)
chr4 (304-453)||(36919447-36919593)
chr4 (286-453)||(2891616-2891780)
chr4 (304-453)||(38928042-38928186)
chr4 (304-453)||(17662109-17662254)
chr4 (292-453)||(48486643-48486803)
chr4 (303-453)||(33415351-33415497)
chr4 (304-453)||(3824467-3824619)
chr4 (283-445)||(16453642-16453799)
chr4 (285-453)||(24446501-24446663)
chr4 (343-453)||(24879314-24879423)
chr4 (308-452)||(47563086-47563225)
chr4 (283-453)||(14789270-14789437)
chr4 (304-453)||(14787292-14787438)
chr4 (304-453)||(6133161-6133307)
chr4 (286-453)||(27499366-27499536)
chr4 (307-453)||(40091281-40091424)
chr4 (343-453)||(24880776-24880887)
chr4 (304-407)||(37312942-37313044)
chr4 (303-452)||(13547479-13547626)
chr4 (286-407)||(16455594-16455714)
chr4 (304-409)||(47868774-47868876)
chr4 (304-409)||(49088922-49089026)
chr4 (304-453)||(37089230-37089381)
chr4 (285-407)||(5101284-5101405)
chr4 (303-453)||(12395707-12395854)
chr4 (303-453)||(12400669-12400816)
chr4 (282-408)||(47210633-47210755)
chr4 (286-453)||(47275049-47275212)
chr4 (304-453)||(11435278-11435429)
chr4 (321-453)||(4215630-4215756)
chr4 (285-453)||(11437686-11437856)
chr4 (304-409)||(2484732-2484833)
chr4 (283-407)||(53405508-53405629)
chr4 (304-453)||(5635335-5635485)
chr4 (308-453)||(51015569-51015715)
chr4 (304-405)||(18409211-18409309)
chr4 (304-405)||(5198781-5198878)
chr4 (284-409)||(16931629-16931750)
chr4 (304-453)||(22044250-22044400)
chr4 (304-409)||(22046545-22046646)
chr4 (292-453)||(14633642-14633804)
chr4 (304-453)||(36378617-36378760)
chr4 (278-405)||(11006086-11006209)
chr4 (305-400)||(22132248-22132340)
chr4 (305-451)||(26085836-26085984)
chr4 (286-409)||(6765217-6765335)
chr4 (304-405)||(8631277-8631374)
chr4 (292-409)||(9148608-9148721)
chr4 (304-405)||(9176332-9176429)
chr4 (304-409)||(24348574-24348675)
chr4 (304-405)||(31849457-31849554)
chr4 (304-453)||(36380674-36380817)
chr4 (283-405)||(11008405-11008523)
chr4 (308-409)||(38409577-38409674)
chr4 (308-407)||(41997858-41997953)
chr4 (294-453)||(619306-619457)
chr4 (304-409)||(18847525-18847626)
chr4 (305-400)||(22134476-22134567)
chr4 (304-409)||(22782595-22782697)
chr4 (304-453)||(3937144-3937283)
chr4 (304-436)||(5664576-5664705)
chr4 (304-405)||(9174004-9174101)
chr4 (304-408)||(7941697-7941797)
chr4 (304-375)||(56030857-56030927)
chr4 (283-409)||(16933985-16934104)
chr4 (379-448)||(30136879-30136945)
chr4 (308-409)||(18709026-18709123)
chr4 (304-409)||(22780230-22780332)
chr4 (304-409)||(44599698-44599798)
chr4 (307-375)||(18534703-18534770)
chr4 (304-436)||(38890092-38890217)
chr4 (304-375)||(19323090-19323160)
chr4 (303-384)||(38270011-38270088)
chr4 (304-345)||(18311234-18311275)
chr4 (304-375)||(15032411-15032480)
chr4 (283-339)||(4558585-4558642)
chr4 (304-360)||(8756120-8756176)
chr4 (304-407)||(12102450-12102549)
chr4 (307-375)||(18537345-18537412)
chr4 (304-409)||(31983402-31983501)
[»] chr2 (51 HSPs)
chr2 (283-451)||(21520531-21520700)
chr2 (304-452)||(43623441-43623588)
chr2 (285-453)||(42923350-42923518)
chr2 (304-453)||(17849363-17849509)
chr2 (285-453)||(3022418-3022583)
chr2 (291-453)||(6258667-6258826)
chr2 (304-452)||(19007887-19008032)
chr2 (283-453)||(6263990-6264157)
chr2 (285-453)||(22287180-22287345)
chr2 (315-437)||(7462819-7462940)
chr2 (286-451)||(14837516-14837679)
chr2 (304-453)||(28196881-28197027)
chr2 (292-453)||(22162875-22163031)
chr2 (307-453)||(15539396-15539538)
chr2 (304-448)||(28459055-28459194)
chr2 (314-453)||(5375218-5375355)
chr2 (304-453)||(23452095-23452246)
chr2 (304-453)||(27105043-27105194)
chr2 (291-407)||(38020370-38020485)
chr2 (308-452)||(22707618-22707759)
chr2 (304-452)||(45238860-45239005)
chr2 (333-452)||(22407346-22407462)
chr2 (321-453)||(17848686-17848814)
chr2 (292-409)||(45279848-45279961)
chr2 (362-453)||(40031972-40032062)
chr2 (307-453)||(13909907-13910054)
chr2 (303-407)||(34979451-34979554)
chr2 (304-405)||(19501860-19501958)
chr2 (283-403)||(19504175-19504291)
chr2 (286-409)||(36558721-36558841)
chr2 (306-453)||(24162084-24162232)
chr2 (283-409)||(36560978-36561101)
chr2 (321-416)||(42064786-42064878)
chr2 (362-453)||(44288987-44289076)
chr2 (286-375)||(22874431-22874519)
chr2 (282-398)||(11739417-11739532)
chr2 (304-409)||(35217828-35217929)
chr2 (328-409)||(38414069-38414149)
chr2 (304-381)||(42453798-42453873)
chr2 (281-409)||(20146454-20146576)
chr2 (285-340)||(42923292-42923347)
chr2 (304-405)||(20592368-20592465)
chr2 (309-452)||(23871063-23871205)
chr2 (304-409)||(35215451-35215552)
chr2 (285-409)||(45332019-45332140)
chr2 (327-407)||(31732669-31732746)
chr2 (320-409)||(11577991-11578076)
chr2 (285-347)||(37962790-37962852)
chr2 (285-390)||(8173635-8173734)
chr2 (284-339)||(37170605-37170660)
chr2 (285-339)||(38191293-38191346)
[»] chr8 (47 HSPs)
chr8 (304-453)||(28251429-28251576)
chr8 (304-453)||(15073037-15073184)
chr8 (308-452)||(41382989-41383132)
chr8 (304-453)||(14808087-14808233)
chr8 (283-453)||(14419032-14419199)
chr8 (285-453)||(35872300-35872462)
chr8 (283-449)||(15068311-15068475)
chr8 (331-453)||(41385070-41385192)
chr8 (285-452)||(25952848-25953011)
chr8 (304-453)||(33541273-33541419)
chr8 (285-453)||(37214108-37214273)
chr8 (304-453)||(30480366-30480512)
chr8 (304-453)||(22684511-22684662)
chr8 (283-453)||(18811033-18811205)
chr8 (293-409)||(36865907-36866023)
chr8 (285-452)||(14477578-14477741)
chr8 (304-453)||(4424344-4424495)
chr8 (304-453)||(27827311-27827462)
chr8 (285-409)||(3874368-3874488)
chr8 (304-407)||(13858352-13858452)
chr8 (304-453)||(27829622-27829773)
chr8 (304-453)||(43530441-43530591)
chr8 (293-453)||(27106754-27106906)
chr8 (285-409)||(27911447-27911568)
chr8 (285-409)||(27957866-27957987)
chr8 (304-405)||(32339688-32339786)
chr8 (304-408)||(5372044-5372148)
chr8 (352-453)||(181805-181901)
chr8 (304-452)||(18813208-18813358)
chr8 (304-409)||(3883454-3883555)
chr8 (304-453)||(28283080-28283230)
chr8 (283-436)||(2467976-2468122)
chr8 (304-453)||(15809544-15809694)
chr8 (284-453)||(15956284-15956445)
chr8 (286-453)||(15185564-15185723)
chr8 (286-436)||(21482653-21482798)
chr8 (305-409)||(44721218-44721318)
chr8 (304-409)||(43082348-43082449)
chr8 (304-416)||(609103-609213)
chr8 (286-409)||(24873039-24873160)
chr8 (304-409)||(31162580-31162682)
chr8 (283-436)||(21480845-21480993)
chr8 (374-452)||(1225494-1225568)
chr8 (304-409)||(43079977-43080078)
chr8 (286-345)||(183251-183310)
chr8 (304-375)||(3005503-3005572)
chr8 (304-339)||(2467897-2467932)
[»] chr6 (50 HSPs)
chr6 (304-453)||(9020231-9020380)
chr6 (292-453)||(3233573-3233734)
chr6 (285-453)||(11982871-11983038)
chr6 (283-453)||(3631781-3631948)
chr6 (292-453)||(30728675-30728833)
chr6 (286-453)||(3629711-3629874)
chr6 (304-453)||(26065286-26065437)
chr6 (304-453)||(26085255-26085406)
chr6 (283-448)||(24338292-24338452)
chr6 (307-437)||(15530027-15530156)
chr6 (283-407)||(3394716-3394840)
chr6 (285-405)||(15367380-15367499)
chr6 (304-410)||(15346690-15346795)
chr6 (304-453)||(2628744-2628895)
chr6 (304-409)||(14458625-14458727)
chr6 (306-453)||(14507037-14507185)
chr6 (283-409)||(33309210-33309332)
chr6 (304-409)||(33311479-33311581)
chr6 (303-405)||(19704421-19704521)
chr6 (286-450)||(1069563-1069724)
chr6 (304-452)||(13057501-13057641)
chr6 (304-453)||(28241180-28241330)
chr6 (304-409)||(5273074-5273176)
chr6 (304-405)||(4816089-4816186)
chr6 (286-409)||(12195354-12195474)
chr6 (291-453)||(14466629-14466786)
chr6 (283-409)||(26068232-26068355)
chr6 (285-407)||(25480227-25480347)
chr6 (291-452)||(22490921-22491074)
chr6 (286-409)||(26065961-26066081)
chr6 (286-409)||(29754549-29754669)
chr6 (304-405)||(20915215-20915312)
chr6 (304-453)||(1230107-1230258)
chr6 (282-405)||(26932399-26932518)
chr6 (304-453)||(30967506-30967656)
chr6 (304-408)||(22611023-22611121)
chr6 (283-360)||(8717192-8717268)
chr6 (304-453)||(15541008-15541149)
chr6 (304-372)||(18322482-18322548)
chr6 (304-409)||(6610379-6610478)
chr6 (393-453)||(13040060-13040117)
chr6 (283-405)||(17012387-17012505)
chr6 (304-452)||(32280303-32280445)
chr6 (283-407)||(25465441-25465558)
chr6 (369-453)||(12186000-12186080)
chr6 (304-404)||(28078065-28078160)
chr6 (304-408)||(30034464-30034562)
chr6 (291-339)||(5165698-5165747)
chr6 (291-339)||(3918789-3918837)
chr6 (284-343)||(10584355-10584415)
[»] scaffold0011 (1 HSPs)
scaffold0011 (304-453)||(35873-36021)
[»] scaffold0045 (1 HSPs)
scaffold0045 (304-448)||(85515-85655)
[»] scaffold0154 (1 HSPs)
scaffold0154 (306-453)||(11335-11482)
[»] scaffold0005 (3 HSPs)
scaffold0005 (283-453)||(50293-50460)
scaffold0005 (304-453)||(52292-52438)
scaffold0005 (292-453)||(183488-183650)
[»] scaffold0131 (1 HSPs)
scaffold0131 (304-453)||(14248-14391)
[»] scaffold0267 (1 HSPs)
scaffold0267 (286-405)||(357-473)
[»] scaffold0339 (1 HSPs)
scaffold0339 (286-453)||(4274-4437)
[»] scaffold0025 (1 HSPs)
scaffold0025 (304-453)||(69150-69301)
[»] scaffold0038 (1 HSPs)
scaffold0038 (304-453)||(41342-41492)
[»] scaffold0472 (1 HSPs)
scaffold0472 (285-409)||(6527-6647)
[»] scaffold0068 (1 HSPs)
scaffold0068 (304-409)||(29498-29599)
[»] scaffold1674 (1 HSPs)
scaffold1674 (291-409)||(1297-1411)
[»] scaffold0370 (1 HSPs)
scaffold0370 (304-405)||(1311-1408)
[»] scaffold0127 (1 HSPs)
scaffold0127 (283-409)||(12712-12834)
[»] scaffold0140 (2 HSPs)
scaffold0140 (304-405)||(24723-24821)
scaffold0140 (283-405)||(22448-22567)
[»] scaffold0891 (1 HSPs)
scaffold0891 (304-408)||(4536-4636)
[»] scaffold0468 (1 HSPs)
scaffold0468 (304-408)||(1510-1609)
[»] scaffold0250 (1 HSPs)
scaffold0250 (304-372)||(3243-3308)


Alignment Details
Target: chr1 (Bit Score: 176; Significance: 1e-94; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 16 - 247
Target Start/End: Complemental strand, 9228998 - 9228767
Alignment:
Q  16 caatgtccttggatgatggaagatgattatgagtgacacgtccaatctatcgctttcattttgatttatgttagattgtgtattgtgtattatacatgta 115  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||    
T  9228998 caatgtccttggatgatggaagatgattatgagtgacacgtcgaatctatcactttgattttaatttatgttagattgtgtattgtgtattatacatgta 9228899  T
Q  116 tgaatgatccaataagttctggaaatagactttgtattatatatgtaatcatgatccaataagttgtgtaactagactttgtattatatatgtatcaata 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||     
T  9228898 tgaatgatccaataagttctggaaatagactttgtattatatatgtaatcatgatccaataagttttgtaactagactttgtattatatacgtataaatg 9228799  T
Q  216 atccaataaaattagtaaaaagactttgtatt 247  Q
    ||| |||||  |  ||||| ||||||||||||    
T  9228798 atctaataagttctgtaaatagactttgtatt 9228767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 286 - 453
Target Start/End: Original strand, 27336782 - 27336951
Alignment:
Q  286 tgttttgaattcgttgtgaaa--tcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattata 383  Q
    |||| ||||||||||| ||||  ||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27336782 tgttgtgaattcgttgagaaaaatcacatcaataacaaacttgatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattata 27336881  T
Q  384 atcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    | ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  27336882 aacacaagccaaaagtagaaaacaacagcgagagaaaaggaagagagaacacaaaagaatttgttgaccc 27336951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 283 - 453
Target Start/End: Original strand, 28206909 - 28207079
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| || |||| ||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  28206909 aattgttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaagtgataatcaggcaaccaaaatcaaagtgtatggaacaattat 28207008  T
Q  383 aatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    || ||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||    
T  28207009 aaacacaagccaaaagtagaaaacaacagcgagagaaaaagaagagagaacacaaaagaatttgttgaccc 28207079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 283 - 452
Target Start/End: Original strand, 27338970 - 27339141
Alignment:
Q  283 aattgttttgaattcgttgtgaaa--tcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaatt 380  Q
    ||||||| ||||||||||| ||||  ||||| |||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27338970 aattgttgtgaattcgttgagaaaaatcacatcaataacaaacttgatgtgtggaacaagggataatcaggcaaccaaaatcaaagtgtatggaacaatt 27339069  T
Q  381 ataatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgacc 452  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  27339070 ataaacacaagccaaaagtagaaaacaacagcgagagaaaaggaagagagaacacaaaagaatttgttgacc 27339141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 39462938 - 39462789
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||    
T  39462938 aaatcacaccaataacaaacttgatgtgtggagcaagggataatcaggcaatcaaaatcaaagtgtatggaacaattataaacacaagccaaaattagaa 39462839  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||||| |||||||| ||||||| |||||||||||||||||||||||    
T  39462838 aacaacagcgagagaaaaagaagagagaacacaaaagaatttgttgaccc 39462789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 50307407 - 50307557
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  50307407 aaatcacaccaataataaacttgatgtctggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataaacacaagccaaaagtagaa 50307506  T
Q  404 aacaacagcaagagaaaaggaagagataacac-aaaagaatttgttgaccc 453  Q
    ||||||||| ||||||||  |||||| ||||| ||||||||||||||||||    
T  50307507 aacaacagcgagagaaaaataagagagaacacaaaaagaatttgttgaccc 50307557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 15823966 - 15823816
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15823966 aaatcacaccaataacaaacttgatgtgtggagtaaggggtaatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaaggcaaaagtagaa 15823867  T
Q  404 aacaacagcaagag-aaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||| |||||| |||| ||||||| |||||||||||||||||||||||    
T  15823866 aacaacaacaagagaaaaaagaagagagaacacaaaagaatttgttgaccc 15823816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 286 - 453
Target Start/End: Original strand, 2949079 - 2949243
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  ||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||     
T  2949079 tgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagcaaccaaaat-aaagtgtatggaacaattataaa 2949177  T
Q  386 cacaagccaaaagtagaaaacaacagcaagaga-aaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||||||||||||||   |||||| ||||| ||||||||||| |||||||||||||||||||||||    
T  2949178 cacaagccaaaagtagaa---aacagcgagagagaaaggaagagagaacacaaaagaatttgttgaccc 2949243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 47906686 - 47906540
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||||||||| |||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  47906686 aaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagcaaccaaac-caaagtgtatggaacaattataatcacaagccaaaagtagaa 47906589  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||||| |||||||| ||||||| |||||||||||||||||||||||    
T  47906588 aacaacagcgagagaaaa-gaagagagaacacaaaagaatttgttgaccc 47906540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 101 - 263
Target Start/End: Complemental strand, 9228866 - 9228704
Alignment:
Q  101 tgtattatacatgtatgaatgatccaataagttctggaaatagactttgtattatatatgtaatcatgatccaataagttgtgtaactagactttgtatt 200  Q
    ||||||||| |||||   ||||||||||||||| || || |||||||||||||||||| |||   |||||| |||||||| ||||| |||||||||||||    
T  9228866 tgtattatatatgtaatcatgatccaataagttttgtaactagactttgtattatatacgtataaatgatctaataagttctgtaaatagactttgtatt 9228767  T
Q  201 atatatgtatcaataatccaataaaattagtaaaaagactttgtattgtgtatgaattatcca 263  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  9228766 atatatgtatgaataatccaataaaattagtaaaaatactttgtattatgtatgaattatcca 9228704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 291 - 453
Target Start/End: Original strand, 25251126 - 25251285
Alignment:
Q  291 tgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaa 390  Q
    |||||||| ||  ||||||||||||||| |||||| ||||||||||||||||||| ||| |||||||||| ||||||||||| |||||||||||||||||    
T  25251126 tgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggatagtcaagcaaccaaaa-caaagtgtatgaaacaattataatcacaa 25251224  T
Q  391 gccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||||||||||||||| |  |||| ||||||||||| |||||||||||||||||||||||    
T  25251225 gccaaaagtagaaaacaac-gagagag-aaaggaagagagaacacaaaagaatttgttgaccc 25251285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 308 - 453
Target Start/End: Original strand, 12302373 - 12302516
Alignment:
Q  308 cacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaaca 407  Q
    ||||||||||| |||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  12302373 cacaccaataacaaacttgatgtgtggagcaagtgataatcaggaaaccaaaatcaaagtgtatggaacaattataaacacaagtcaaaagtagaaaaca 12302472  T
Q  408 acagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    || |  |||||||| ||||||| |||||||||||||||||||||||    
T  12302473 ac-gagagagaaaa-gaagagagaacacaaaagaatttgttgaccc 12302516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 23816305 - 23816156
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  23816305 aaatcacaccaataacaa-cttgatgtgtggagcaaggaataatcaagcaaccaaaa-caaagtgtatggaacaattataatcacaagtcaaaagtagaa 23816208  T
Q  404 aacaacagcaagagaaaag--gaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||||| |||||||||   |||||| |||||||||||||||||||||||    
T  23816207 aacaacagcgagagaaaagaaaaagagagaacacaaaagaatttgttgaccc 23816156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 308 - 453
Target Start/End: Original strand, 14097837 - 14097980
Alignment:
Q  308 cacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaaca 407  Q
    ||||||||||| |||||| ||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  14097837 cacaccaataacaaacttgatgtgtgaagcaagagataatcaagcaaccaaaatcaaagtgtatggaacaattataaacacaagtcaaaagtagaaaaca 14097936  T
Q  408 acagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    || |  |||| ||||||||||| |||||||||||||||||||||||    
T  14097937 ac-gagagag-aaaggaagagagaacacaaaagaatttgttgaccc 14097980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 284 - 453
Target Start/End: Complemental strand, 41647357 - 41647190
Alignment:
Q  284 attgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattata 383  Q
    |||||| |||||||| || |||| ||||||||||| |||||| ||||| |||||||| ||||||||| ||||||||||||||||||||| || |||||||    
T  41647357 attgttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgcggagcaagtgataatcagacaaccaaaatcaaagtgtatgaaataattata 41647258  T
Q  384 atcacaagccaaaagtagaaaacaacagcaagaga-aaaggaagagataacacaaaagaatttgttgaccc 453  Q
    | |||||| |||||||||||   |||||||||||| ||||||||||| ||||||| |||||||||||||||    
T  41647257 aacacaagtcaaaagtagaa---aacagcaagagagaaaggaagagagaacacaagagaatttgttgaccc 41647190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 286 - 453
Target Start/End: Original strand, 50248417 - 50248581
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  ||||||||||||||| ||| || |||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||     
T  50248417 tgttgtgaattcgatgataaatcacaccaataacaaatttgatgtgtggagtaagggataatcaagcaaccaaaa-caaagtgtatggaacaattataac 50248515  T
Q  386 cacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||||||||||| ||||||||| |  |||| ||||||||||| |||||||||||||||||||||||    
T  50248516 cacaagccaaaagttgaaaacaac-gagagag-aaaggaagagagaacacaaaagaatttgttgaccc 50248581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 284 - 451
Target Start/End: Original strand, 38925326 - 38925490
Alignment:
Q  284 attgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaacc-aaaatcaaagtgtatggaacaattat 382  Q
    |||||| |||||| | || |||| |||||||||||||||||| |||||||||| ||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  38925326 attgttgtgaatttgatgagaaaacacaccaataataaacttgatgtgtggagtaagtgataatcaggcaaccaaaaatcaaagtgtatggaacatttat 38925425  T
Q  383 aatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgac 451  Q
    || |||||||||||||||||||||||     |||||||| ||||||| |||||||||||||||||||||    
T  38925426 aaacacaagccaaaagtagaaaacaa---tgagagaaaa-gaagagagaacacaaaagaatttgttgac 38925490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 304 - 452
Target Start/End: Original strand, 6995558 - 6995710
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||||||||||||| ||| |||| ||||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  6995558 aaatcacaccaataacaaacttgatgtgtggagcaagggatagtcaagcaatcaaaa-caaagtgtatggaacaactataaacacaagccaaaagtagaa 6995656  T
Q  404 aacaacagcaagagaaaaggaagagat-----aacacaaaagaatttgttgacc 452  Q
    ||||||||| |||||||| |||||||      ||||||||||||||||||||||    
T  6995657 aacaacagcgagagaaaaagaagagaagagagaacacaaaagaatttgttgacc 6995710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 286 - 451
Target Start/End: Complemental strand, 13215518 - 13215358
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| ||||||||||| |||| |||||||||||||||||| ||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||     
T  13215518 tgttgtgaattcgttgagaaaacacaccaataataaacttgatgtgtggagcaagggatagtcaaacaaccaaaa-caaagtgtatggaacaattataaa 13215420  T
Q  386 cacaagccaaaagtagaaaacaacagcaagaga-aaaggaagagataacacaaaagaatttgttgac 451  Q
    ||||||||||||||||||   |||||| ||||| ||||||||||| |  ||||||||||||||||||    
T  13215419 cacaagccaaaagtagaa---aacagcgagagagaaaggaagagaga--acaaaagaatttgttgac 13215358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 283 - 453
Target Start/End: Original strand, 28998091 - 28998264
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaa--atcaaagtgtatggaacaatt 380  Q
    ||||||| ||||||||  | |||| ||||||||| | |||||| |||||||||||||| ||||||||||||||||||  |||||||||||||||||||||    
T  28998091 aattgttgtgaattcgaagagaaaacacaccaatgacaaacttgatgtgtggagcaagtgataatcaggcaaccaaagaatcaaagtgtatggaacaatt 28998190  T
Q  381 ataatcacaagccaaaagtagaaaacaacagcaagagaaaag----gaagagataacacaaaagaatttgttgaccc 453  Q
    |||| |||||||||||||||||||||||   | |||||||||     |||||| |||||||||||||||||||||||    
T  28998191 ataaacacaagccaaaagtagaaaacaa---cgagagaaaagaagaaaagagagaacacaaaagaatttgttgaccc 28998264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 283 - 453
Target Start/End: Original strand, 29003807 - 29003980
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaa--atcaaagtgtatggaacaatt 380  Q
    ||||||| ||||||||  | |||| ||||||||| | |||||| |||||||||||||| ||||||||||||||||||  |||||||||||||||||||||    
T  29003807 aattgttgtgaattcgaagagaaaacacaccaatgacaaacttgatgtgtggagcaagtgataatcaggcaaccaaagaatcaaagtgtatggaacaatt 29003906  T
Q  381 ataatcacaagccaaaagtagaaaacaacagcaagagaaaag----gaagagataacacaaaagaatttgttgaccc 453  Q
    |||| |||||||||||||||||||||||   | |||||||||     |||||| |||||||||||||||||||||||    
T  29003907 ataaacacaagccaaaagtagaaaacaa---cgagagaaaagaagaaaagagagaacacaaaagaatttgttgaccc 29003980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 304 - 452
Target Start/End: Original strand, 11457340 - 11457485
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||| |||||| ||||||||||||||||||| |||||| |||||||||||| ||| ||||||||||||||||||    
T  11457340 aaatcacaccaataacaaacttgatgtgtgaagcaagtgataatcaggcaaccaaaa-caaagtatatggaacaattttaaacacaagccaaaagtagaa 11457438  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgacc 452  Q
    |||| | |  |||||||| ||||||| ||||||||||||||||||||||    
T  11457439 aacagc-gagagagaaaa-gaagagagaacacaaaagaatttgttgacc 11457485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 292 - 451
Target Start/End: Complemental strand, 18307537 - 18307381
Alignment:
Q  292 gaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaag 391  Q
    ||||||| || ||||  ||| |||||| |||||| |||||||||||||  |||||| |||||||||||| ||||||||||||||||||||||| ||||||    
T  18307537 gaattcgatgagaaaatacatcaataacaaacttgatgtgtggagcaaatgataattaggcaaccaaaa-caaagtgtatggaacaattataaacacaag 18307439  T
Q  392 ccaaaagtagaaaacaacagcaagaga-aaaggaagagataacacaaaagaatttgttgac 451  Q
    ||||||||||||   |||||| ||||| ||||||||||| |||||||||||||||||||||    
T  18307438 ccaaaagtagaa---aacagcgagagagaaaggaagagagaacacaaaagaatttgttgac 18307381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 304 - 429
Target Start/End: Original strand, 50078654 - 50078779
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  50078654 aaatcacaccaataacaaacttgatgtgtggagcaaggaataatcaagcaaccaaaa-caaagtgtatggaacaattataaacacaagccaaaagtagaa 50078752  T
Q  404 aacaac-agcaagagaaaaggaagaga 429  Q
    |||||| ||  |||||||| |||||||    
T  50078753 aacaacgagagagagaaaaagaagaga 50078779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 307 - 451
Target Start/End: Original strand, 4131243 - 4131384
Alignment:
Q  307 tcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaac 406  Q
    |||||||||||| |||||| ||||| |||||||| |||||||| |||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||    
T  4131243 tcacaccaataacaaacttgatgtgcggagcaagagataatcaagcaaccaaaa-caaagtgtatggaacaattataaacacaagccaaaaatagaaaac 4131341  T
Q  407 aacagcaagagaaaaggaagagataacacaaaagaatttgttgac 451  Q
    ||| |  |||||||| ||| ||| |||||||||||||||||||||    
T  4131342 aac-gagagagaaaa-gaacagagaacacaaaagaatttgttgac 4131384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 308 - 407
Target Start/End: Original strand, 3579452 - 3579550
Alignment:
Q  308 cacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaaca 407  Q
    ||||||||||| |||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  3579452 cacaccaataacaaacttgatgtgtggagcaagtgataatcaggcaaccaaaat-aaagtgtatggaacaattataaacacaagccaaaagtagaaaaca 3579550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 283 - 453
Target Start/End: Complemental strand, 16429390 - 16429228
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  ||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||| |||||||||||||  | ||||    
T  16429390 aattgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagtgataatcaggcaaccaaaa-caaagtgtatgga--agttat 16429294  T
Q  383 aatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    || ||||| |||||||| |||   |||||| |||||||| ||||||| |||||||||||||||||||||||    
T  16429293 aaacacaaaccaaaagt-gaa---aacagcgagagaaaa-gaagagagaacacaaaagaatttgttgaccc 16429228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 284 - 421
Target Start/End: Original strand, 25860250 - 25860383
Alignment:
Q  284 attgttttgaattcgttgtgaaatc-acaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    |||||| |||||||||||||||| | |||||||||  |||||| ||||||||||||||||||| |||    ||||||| |||||||||||||||||||||    
T  25860250 attgttgtgaattcgttgtgaaaaccacaccaatatcaaacttgatgtgtggagcaagggatagtca----accaaaa-caaagtgtatggaacaattat 25860344  T
Q  383 aatcacaagccaaaagtagaaaacaacagcaagagaaaa 421  Q
    || ||||||||||||||||||||||||||| ||||||||    
T  25860345 aaacacaagccaaaagtagaaaacaacagcgagagaaaa 25860383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 304 - 429
Target Start/End: Complemental strand, 47452047 - 47451923
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    |||||||| |||||| ||| || |||||| |||||||||||| ||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  47452047 aaatcacatcaataacaaatttgatgtgtcgagcaagggatagtcaagcaaccaaaa-caaagtgtatggaacaattataaacacaagccaaaagtagaa 47451949  T
Q  404 aacaacagcaagagaaaaggaagaga 429  Q
    | ||||| | ||||||||||||||||    
T  47451948 agcaacaacgagagaaaaggaagaga 47451923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 308 - 421
Target Start/End: Complemental strand, 2617934 - 2617824
Alignment:
Q  308 cacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaaca 407  Q
    ||||||||||| || ||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  2617934 cacaccaataacaa-cttgatgtgtgaagcaagggataatcaagcaaccaaaatcaaagtgtatggaacaatta-aat-acaagccaaaagtagaaaaca 2617838  T
Q  408 acagcaagagaaaa 421  Q
    ||||| ||||||||    
T  2617837 acagcgagagaaaa 2617824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 18840004 - 18839858
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||||||||| ||||||| | || | ||| ||||||||||||||||||||||| |||||||||||| |||||    
T  18840004 aaatcacaccaataacaaacttgatgtgtggagcaaggaataatcaagtaatcgaaa-caaagtgtatggaacaattataaacacaagccaaaactagaa 18839906  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||| | |  |||||||| ||||||| ||||| |||||||||||||||||    
T  18839905 aacagc-gagagagaaaa-gaagagagaacacgaaagaatttgttgaccc 18839858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 31424880 - 31425026
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||||||||| ||| ||| ||||||| || |||| ||||||| |||||||||| |||||| |||||||||||    
T  31424880 aaatcacaccaataacaaacttgatgtgtggagcaaggaatactcaagcaaccataa-caaaatgtatgggacaattataaacacaagtcaaaagtagaa 31424978  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||| | |  |||||||| ||||||| |||||||||||||||||||||||    
T  31424979 aacagc-gagagagaaaa-gaagagagaacacaaaagaatttgttgaccc 31425026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 306 - 453
Target Start/End: Original strand, 10399690 - 10399839
Alignment:
Q  306 atcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaa 405  Q
    ||||||||||||| || ||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  10399690 atcacaccaataacaa-cttgatgtgtggagcaagagataatcaagcaaccaaaatcaaagtgtatggaacaatta-aat-acaagccaaaagtagaaaa 10399786  T
Q  406 caacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  10399787 caacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 10399839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 286 - 448
Target Start/End: Complemental strand, 40134378 - 40134220
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaaggg--ataatcaggcaaccaaaatcaaagtgtatggaacaattata 383  Q
    |||| |||||||| ||  |||||||| |||||| |||||| |||||||||||||| |  |||||||||||||||||| |||||||||||||  | |||||    
T  40134378 tgttgtgaattcgatgaaaaatcacatcaataacaaacttgatgtgtggagcaagtgatataatcaggcaaccaaaa-caaagtgtatgga--agttata 40134282  T
Q  384 atcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgtt 448  Q
    ||| |||||||||||||||||||||   | |||||||| ||| ||| ||||||||||||||||||    
T  40134281 atctcaagccaaaagtagaaaacaa---cgagagaaaaagaatagagaacacaaaagaatttgtt 40134220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 51750459 - 51750309
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  51750459 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaagccaaaagtagaa 51750364  T
Q  404 aacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  51750363 aacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 51750309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 283 - 409
Target Start/End: Complemental strand, 16226610 - 16226487
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  ||||||||||||||| || ||| ||||||||||||||||||||||| ||||||||||||||||||||||  | | ||||    
T  16226610 aattgttgtgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaatcaaagtgtatg--aaagttat 16226514  T
Q  383 aatcacaagccaaaagtagaaaacaac 409  Q
    ||  |||||||||||||||||||||||    
T  16226513 aaatacaagccaaaagtagaaaacaac 16226487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 286 - 453
Target Start/End: Complemental strand, 17319321 - 17319157
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  ||||| ||||||||| ||| || |||||||||| |||| |||||||  ||||||||| |||||||||||||| | ||||||     
T  17319321 tgttgtgaattcgatgaaaaatcgcaccaataacaaatttgatgtgtggagtaaggaataatcaaacaaccaaaa-caaagtgtatggaatagttataaa 17319223  T
Q  386 cacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||||||||||||||||| | | |  ||||||||| |||||| |||||||||||||||||||||||    
T  17319222 cacaagccaaaagtagaaaatagc-gagagagaaaag-aagagagaacacaaaagaatttgttgaccc 17319157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 304 - 448
Target Start/End: Original strand, 9240952 - 9241091
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| | |||||||||||| |||||||| |||||||||| ||||||||||| |||||||||||  |||| ||||||||||||    
T  9240952 aaatcacaccaataacaaacttgaagtgtggagcaagtgataatcaagcaaccaaaa-caaagtgtatgaaacaattataaatacaaaccaaaagtagaa 9241050  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgtt 448  Q
       |||||| |||| |||| |||||| |||| |||||||||||||    
T  9241051 ---aacagcgagag-aaagaaagagagaacaaaaaagaatttgtt 9241091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 304 - 450
Target Start/End: Complemental strand, 31490327 - 31490185
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||  |||||| |||||||||||||| |||||||| ||||||||||| |||||||||| ||||||||||| |||||| |||||||||||    
T  31490327 aaatcacaccaatac-aaacttgatgtgtggagcaagagataatcaagcaaccaaaat-aaagtgtatgaaacaattataaacacaagtcaaaagtagaa 31490230  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttga 450  Q
    ||| |  |  ||||||||  |||||| ||||||||||||||||||||    
T  31490229 aac-agggagagagaaaa-taagagagaacacaaaagaatttgttga 31490185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 13447134 - 13447284
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  13447134 aaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaagccaaaagtagaa 13447229  T
Q  404 aacaacagcaagagaa----aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || ||| ||    || |||||| | |||||||||||||||||||||||    
T  13447230 aacaacggcgagaaaaacacaaagaagagaagaacacaaaagaatttgttgaccc 13447284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 13762256 - 13762106
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||||| |||||||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  13762256 aaatcacaccaataacaa-cttgatgtgtggagaaagggataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaagccaaaagtagaa 13762161  T
Q  404 aacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  13762160 aacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 13762106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 15294695 - 15294845
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  15294695 aaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaagccaaaagtagaa 15294790  T
Q  404 aacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  15294791 aacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 15294845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 286 - 405
Target Start/End: Complemental strand, 39932514 - 39932398
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  ||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||| |||||||||||||  | ||||||     
T  39932514 tgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatgga--agttataaa 39932418  T
Q  386 cacaagccaaaagtagaaaa 405  Q
     |||||||||||||||||||    
T  39932417 tacaagccaaaagtagaaaa 39932398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 286 - 453
Target Start/End: Original strand, 25248398 - 25248562
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  |||||||| |||||| |||||| |||||||||| |||| ||| ||| |||||||||| ||||||||||| |||||||||||     
T  25248398 tgttgtgaattcgatgaaaaatcacaacaataacaaacttgatgtgtggagtaaggaatagtcaagcaaccaaaa-caaagtgtatgaaacaattataaa 25248496  T
Q  386 cacaagccaaaagtagaaaacaacagcaagagaaaa-ggaagagataacacaaaagaatttgttgaccc 453  Q
    || ||| |||||||||||||||   || ||||| |  |||||| | |||||||||||||||||||||||    
T  25248497 caaaagtcaaaagtagaaaaca---gcgagagacaccggaagataaaacacaaaagaatttgttgaccc 25248562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 283 - 409
Target Start/End: Complemental strand, 47177804 - 47177681
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| |   ||||||||||||||| || ||| ||||||||||||||||||||| | |||||||||||||||| |||||||| |||||     
T  47177804 aattgttgtgaattcgatcaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagcaaccaaaatcaaagcgtatggaataatta- 47177707  T
Q  383 aatcacaagccaaaagtagaaaacaac 409  Q
    ||| |||||||||||||||||||||||    
T  47177706 aat-acaagccaaaagtagaaaacaac 47177681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 329 - 453
Target Start/End: Original strand, 50076563 - 50076683
Alignment:
Q  329 gtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagag 428  Q
    ||||||||||| | ||||| | ||||| |||| ||||||||||||||||||||||| ||||||  |||||||||||||||   | |||||||| ||||||    
T  50076563 gtgtggagcaatgaataataaagcaactaaaa-caaagtgtatggaacaattataaacacaagttaaaagtagaaaacaa---cgagagaaaaagaagag 50076658  T
Q  429 ataacacaaaagaatttgttgaccc 453  Q
    | |||||||||||||||||||||||    
T  50076659 agaacacaaaagaatttgttgaccc 50076683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 310 - 407
Target Start/End: Complemental strand, 17324484 - 17324388
Alignment:
Q  310 caccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaaca 407  Q
    ||||||||| |||||| ||||||||||||||| ||||||| ||||||| || ||||||||||| || |||||||| ||||||||||||||||||||||    
T  17324484 caccaataacaaacttgatgtgtggagcaaggaataatcaagcaaccataa-caaagtgtatgaaaaaattataaacacaagccaaaagtagaaaaca 17324388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 304 - 409
Target Start/End: Complemental strand, 20291877 - 20291775
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||||||||| |||||||| | |||||||||||| |||||||||||||||| ||| |||||||||||||||||    
T  20291877 aaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagtaaccaaaatcaaggtgtatggaacaatta-aat-acaagccaaaagtagaa 20291781  T
Q  404 aacaac 409  Q
    ||||||    
T  20291780 aacaac 20291775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 286 - 409
Target Start/End: Complemental strand, 16232002 - 16231882
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  ||||||||||||||| || ||| ||||||||||||| ||||||||| ||||||||||||||||||||||  | | ||||||     
T  16232002 tgttgtgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagcaacggataatcaagcaaccaaaatcaaagtgtatg--aaagttataaa 16231906  T
Q  386 cacaagccaaaagtagaaaacaac 409  Q
     |||||||||||||||||||||||    
T  16231905 tacaagccaaaagtagaaaacaac 16231882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 17185997 - 17186138
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    |||||||||||||||||||||| || ||||||||||| |||| ||| |||||||||| |||||||||||||  | ||||||||||||  |||||||||||    
T  17185997 aaatcacaccaataataaacttgatatgtggagcaagtgatagtcaagcaaccaaaa-caaagtgtatgga--agttataatcacaa-acaaaagtagaa 17186092  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
       |||||| |||| |||| |||||| |||||||||||||||||| ||||    
T  17186093 ---aacagcgagag-aaagaaagagagaacacaaaagaatttgtttaccc 17186138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 307 - 453
Target Start/End: Original strand, 17324500 - 17324647
Alignment:
Q  307 tcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagcca-aaagtagaaaa 405  Q
    |||||||||||| |||||| |||||||||| |||||||| ||| ||| ||| || ||||||| || ||||||||||||||| |||||| |||||||||||    
T  17324500 tcacaccaataacaaacttgatgtgtggagtaagggatagtcaagcagccataa-caaagtgaatagaacaattataatcataagccagaaagtagaaaa 17324598  T
Q  406 caacagcaagagaaaag----gaagagataacacaaaagaatttgttgaccc 453  Q
    ||   || |||||||||    ||||||| |||||||||||||||||||||||    
T  17324599 ca---gcgagagaaaagaagagaagagagaacacaaaagaatttgttgaccc 17324647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 31422724 - 31422871
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat-aatcacaagccaaaagtaga 402  Q
    |||||||| |||||| |||||| ||||||||||||||| |||||||  |||| ||||| |||||||| |||| |||||| || |||||| ||||||||||    
T  31422724 aaatcacatcaataacaaacttgatgtgtggagcaaggaataatcaatcaactaaaat-aaagtgtacggaataattataaaacacaagtcaaaagtaga 31422822  T
Q  403 aaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||| | |  |||||||| ||||||||| |||||||||||||||| ||||    
T  31422823 aaacagc-gagagagaaaa-gaagagatatcacaaaagaatttgttcaccc 31422871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 13358994 - 13358843
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||||| |||||||| ||| ||||||||||||||||||||||  | | ||||||  |||||||||||||||||    
T  13358994 aaatcacaccaataacaa-cttgatgtgtggagtaagggatagtcaagcaaccaaaatcaaagtgtatg--aaagttataaatacaagccaaaagtagaa 13358898  T
Q  404 aacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  13358897 aacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 13358843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 409
Target Start/End: Complemental strand, 20302862 - 20302760
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||| ||||||||| |||||||| | |||||||||||| |||||||||||||||| ||| |||||||||||||||||    
T  20302862 aaatcacaccaataacaa-cttgatgtctggagcaagagataatcaagtaaccaaaatcaaggtgtatggaacaatta-aat-acaagccaaaagtagaa 20302766  T
Q  404 aacaac 409  Q
    ||||||    
T  20302765 aacaac 20302760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 409
Target Start/End: Complemental strand, 47180134 - 47180032
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||| | |||| ||||||||||| |||||||| ||||| ||| |||||||||||||||||    
T  47180134 aaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagcaatcaaaatcaaagcgtatggaataatta-aat-acaagccaaaagtagaa 47180038  T
Q  404 aacaac 409  Q
    ||||||    
T  47180037 aacaac 47180032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 286 - 409
Target Start/End: Original strand, 9459277 - 9459396
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| |||||||||||  | | ||||||     
T  9459277 tgttgtgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatg--aaagttataaa 9459372  T
Q  386 cacaagccaaaagtagaaaacaac 409  Q
     |||||||||||||||||||||||    
T  9459373 tacaagccaaaagtagaaaacaac 9459396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 286 - 409
Target Start/End: Original strand, 9463104 - 9463223
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| |||||||||||  | | ||||||     
T  9463104 tgttgtgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatg--aaagttataaa 9463199  T
Q  386 cacaagccaaaagtagaaaacaac 409  Q
     |||||||||||||||||||||||    
T  9463200 tacaagccaaaagtagaaaacaac 9463223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 326 - 451
Target Start/End: Complemental strand, 16429044 - 16428926
Alignment:
Q  326 aatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaacaacagcaagagaaaaggaa 425  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||| |||   |||||| ||||| |||||||||||||||| |    ||||||||| ||    
T  16429044 aatgtgtggagcaagtgataatcaggcaaccaaaa-caaagtgtatagaag--ttataaacacaaaccaaaagtagaaaacatcg---agagaaaag-aa 16428952  T
Q  426 gagataacacaaaagaatttgttgac 451  Q
    |||| |||||||||||||||||||||    
T  16428951 gagagaacacaaaagaatttgttgac 16428926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 313 - 453
Target Start/End: Complemental strand, 25128280 - 25128143
Alignment:
Q  313 caataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaacaacagc 412  Q
    |||||| |||||| |||||| |||||||| ||||||| |||||||||||||||||| ||  | |||||||||||||||   ||||||||||   ||||||    
T  25128280 caataacaaacttgatgtgtagagcaaggaataatcaagcaaccaaaatcaaagtggat--agcaattataatcacaa-ataaaagtagaa---aacagc 25128187  T
Q  413 aagaga---aaaggaagagataacacaaaagaatttgttgaccc 453  Q
     |||||   ||||||||||| |||||||||||||||||||||||    
T  25128186 gagagaaagaaaggaagagagaacacaaaagaatttgttgaccc 25128143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 292 - 453
Target Start/End: Original strand, 31735371 - 31735532
Alignment:
Q  292 gaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaag 391  Q
    ||||||| || ||||| |||||||||| || ||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||| ||| |||||    
T  31735371 gaattcgatgagaaattacaccaataacaa-cttgatgtgtggagcaagagataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaag 31735466  T
Q  392 ccaaaagtagaaaacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| ||||||||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  31735467 ccaaaa-tagaaaacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 31735532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 46431566 - 46431717
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||| ||||||||| |||||||| |||||||||| ||||| |||||||||||||| ||| |||||||||||||||||    
T  46431566 aaatcacaccaataacaa-cttgatgtttggagcaagagataatcaagcaaccaaaa-caaagcgtatggaacaatta-aat-acaagccaaaagtagaa 46431661  T
Q  404 aacaacagcaag-aga----aaaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || || |||    ||| |||||| | |||||||||||||||||||||||    
T  46431662 aacaacggcgagaagaacacaaaagaagagaagaacacaaaagaatttgttgaccc 46431717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 283 - 401
Target Start/End: Complemental strand, 51757976 - 51757862
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  |||| |||||||||| || ||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||      
T  51757976 aattgttgtgaattcgatgaaaaatgacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatggaacaatt-g 51757880  T
Q  383 aatcacaagccaaaagtag 401  Q
    ||| |||||||||||||||    
T  51757879 aat-acaagccaaaagtag 51757862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 286 - 409
Target Start/End: Complemental strand, 23786278 - 23786158
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  ||||||||||||||| || ||| ||||||||||||||||||||| | |||||||||| ||||| |||||||||||||| |||    
T  23786278 tgttgtgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagcaaccaaaa-caaagcgtatggaacaatta-aat 23786182  T
Q  386 cacaagcc-aaaagtagaaaacaac 409  Q
     ||||||| ||||||||||||||||    
T  23786181 -acaagccaaaaagtagaaaacaac 23786158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 286 - 406
Target Start/End: Complemental strand, 30780482 - 30780361
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtg--gagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattata 383  Q
    |||| |||||||| ||  || |||||||||||| |||||| |||||||  ||| |||| ||||||| |||||||||| ||||||||||| ||||||||||    
T  30780482 tgttgtgaattcgatgaaaactcacaccaataacaaacttgatgtgtgtggagtaaggaataatcaagcaaccaaaa-caaagtgtatgaaacaattata 30780384  T
Q  384 atcacaagccaaaagtagaaaac 406  Q
    | |||||  ||||||||||||||    
T  30780383 aacacaaatcaaaagtagaaaac 30780361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 286 - 409
Target Start/End: Original strand, 2510184 - 2510304
Alignment:
Q  286 tgttttgaattcgttgtgaaa-tcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    |||| |||||||||||||||| |||||||||||| || ||| || |||| |||||| |||||||| ||||| |||| |||||||||||||||||||| ||    
T  2510184 tgttgtgaattcgttgtgaaaatcacaccaataacaa-cttgatatgtgaagcaagagataatcaagcaacgaaaa-caaagtgtatggaacaattaaaa 2510281  T
Q  385 tcacaagccaaaagtagaaaacaac 409  Q
      ||||| ||||| |||||||||||    
T  2510282 --acaagtcaaaaatagaaaacaac 2510304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 401
Target Start/End: Complemental strand, 51752788 - 51752696
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtag 401  Q
    |||||||||||||||||| |||| |||||||||||||||||||||| |||||||||| ||||||||||| |||||||  ||| |||||||||||||||    
T  51752788 aaatcacaccaataataa-ctta-tgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatgaaacaatt-gaat-acaagccaaaagtag 51752696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 453
Target Start/End: Complemental strand, 28841083 - 28840949
Alignment:
Q  321 aacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaacaacagcaag-agaa 419  Q
    ||||| ||| ||||||||||||||||||| |||||||||| |||||||||||  | | ||||||  ||||||||||||||||||||||| || || ||||    
T  28841083 aacttgatgagtggagcaagggataatcaagcaaccaaaa-caaagtgtatg--aaagttataaatacaagccaaaagtagaaaacaacggcgagaagaa 28840987  T
Q  420 ---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
       || |||||| | |||||||||||||||||||||||    
T  28840986 cacaaagaagagaagaacacaaaagaatttgttgaccc 28840949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 286 - 381
Target Start/End: Complemental strand, 24326101 - 24326008
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaatta 381  Q
    |||| |||||||| ||  ||||||||||||||| || ||| |||||||||| |||||||||||| ||||||||| | |||||||||||||||||||    
T  24326101 tgttgtgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagtaagggataatcaagcaaccaaagt-aaagtgtatggaacaatta 24326008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 409
Target Start/End: Complemental strand, 28842914 - 28842813
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||| ||||| || ||| |||||||||| |||||||||||| |||||||||| |||||||||||  | | ||||||  |||||||||||||||||    
T  28842914 aaatcacactaataacaa-cttgatgtgtggagtaagggataatcaagcaaccaaaa-caaagtgtatg--aaagttataaatacaagccaaaagtagaa 28842819  T
Q  404 aacaac 409  Q
    ||||||    
T  28842818 aacaac 28842813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 6114971 - 6115113
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||  ||||| |||| |||||||||| ||| |||||||| ||||||||||| ||| ||||||||  | ||||||  ||||| |||||||||||    
T  6114971 aaatcacaccggtaatatacttgatgtgtggagaaagtgataatcaagcaaccaaaat-aaaatgtatgga--agttataaatacaagtcaaaagtagaa 6115067  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
     ||||   | |||||||| ||||||| ||||||||| |||||||| ||||    
T  6115068 gacaa---cgagagaaaa-gaagagagaacacaaaataatttgtttaccc 6115113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 286 - 405
Target Start/End: Complemental strand, 15916821 - 15916706
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  || |||||||||||| | |||| ||||||||||||||  | ||||| |||||||||| ||||||||||||||   ||||||     
T  15916821 tgttgtgaattcgatgaaaagtcacaccaataa-atacttgatgtgtggagcaagtaacaatcaagcaaccaaaa-caaagtgtatggaag--ttataaa 15916726  T
Q  386 cacaagccaaaagtagaaaa 405  Q
    ||||||||||||||||||||    
T  15916725 cacaagccaaaagtagaaaa 15916706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 14183472 - 14183573
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| | |||| ||||||| ||||||  ||||||| |||||||||| |||||||||||||  | |||||| |||||| |||||| ||||    
T  14183472 aaatcacaccaataaaatacttgatgtgtgaagcaagtaataatcaagcaaccaaaa-caaagtgtatgga--agttataaacacaag-caaaagaagaa 14183567  T
Q  404 aacaac 409  Q
    ||||||    
T  14183568 aacaac 14183573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 18800440 - 18800542
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    |||||||||||| || | |||| |||||| ||||||   ||||||| |||| ||||| ||||||||||||||   |||||| ||||||||||||||||||    
T  18800440 aaatcacaccaacaaaatacttgatgtgtagagcaaataataatcaagcaatcaaaa-caaagtgtatggaag--ttataaacacaagccaaaagtagaa 18800536  T
Q  404 aacaac 409  Q
    ||||||    
T  18800537 aacaac 18800542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 452
Target Start/End: Complemental strand, 16432803 - 16432667
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| ||| || ||||||||||||||  |||||||||||| ||||| || ||||||||  | | |||||| || || ||||||||||||    
T  16432803 aaatcacaccaataacaaatttgatgtgtggagcaagtaataatcaggcaatcaaaa-cacagtgtatg--aaagttataaacataaaccaaaagtagaa 16432707  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgacc 452  Q
    |  |||||       ||| ||||||| ||||||||||||||||||||||    
T  16432706 a--aacag-------aaaagaagagagaacacaaaagaatttgttgacc 16432667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 283 - 408
Target Start/End: Original strand, 8348902 - 8349021
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  ||||||||||||||| |||||| | ||||||| ||||  ||||||| |||||||||  |||||||||||||  | ||||    
T  8348902 aattgttgtgaattcgatgaaaaatcacaccaataa-aaacttgacgtgtggaacaagtaataatcaagcaaccaaa--caaagtgtatgga--agttat 8348996  T
Q  383 aatcacaagccaaaagtagaaaacaa 408  Q
    || |||||  ||||||||||||||||    
T  8348997 aaacacaa-acaaaagtagaaaacaa 8349021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 419 - 453
Target Start/End: Original strand, 3579594 - 3579628
Alignment:
Q  419 aaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||||||||||||||||||||||||||||||||    
T  3579594 aaaggaagagataacacaaaagaatttgttgaccc 3579628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 450
Target Start/End: Complemental strand, 6756877 - 6756801
Alignment:
Q  370 atggaacaattataatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttga 450  Q
    ||||||||||||||| |||||| |||||||||||   |||||| |||| ||| ||||||| |||| |||||||||||||||    
T  6756877 atggaacaattataaacacaagtcaaaagtagaa---aacagcgagaggaaa-gaagagagaacagaaaagaatttgttga 6756801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 375
Target Start/End: Original strand, 30790267 - 30790337
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaa 375  Q
    ||||||||||||||| | || | ||||||| ||||||  ||||||| |||||||||| ||||||||||||||    
T  30790267 aaatcacaccaataaaatacctgatgtgtgaagcaagtaataatcaagcaaccaaaa-caaagtgtatggaa 30790337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 406
Target Start/End: Complemental strand, 16561877 - 16561781
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| | |||| |||||||||| ||   ||||||| |||||||| ||||| |||    |||||||||||| |||||| |||||||||||    
T  16561877 aaatcacaccaataaaatacttgatgtgtggagaaa--aataatcaagcaaccaatatcaacgtg---agaacaattataaacacaag-caaaagtagaa 16561784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 375
Target Start/End: Original strand, 26519306 - 26519373
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaa 375  Q
    ||||||||||||||| | ||||  |||||||||||||  ||||||| |||||||||  ||||||||||||||    
T  26519306 aaatcacaccaataaaatactt--tgtgtggagcaagtaataatcaagcaaccaaa--caaagtgtatggaa 26519373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 126; Significance: 8e-65; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 79613 - 79464
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  79613 aaatcacaccaataacaaacttgatgtgtggagcaagggataattaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 79514  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||||||    
T  79513 aacaacagcaagagaaaaagaagagagaacacaaaataatttgttgaccc 79464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 118; Significance: 5e-60; HSPs: 85)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 32219484 - 32219335
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||| ||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  32219484 aaatcacacaaataacaaacttgatgtgtggagcaagggataatcaagcaaccaaaatcaaagtgtatggaacaattataaacacaagccaaaagtagaa 32219385  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||||| |||||||| ||||||| |||||||||||||||||||||||    
T  32219384 aacaacagcgagagaaaaagaagagagaacacaaaagaatttgttgaccc 32219335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 286 - 453
Target Start/End: Complemental strand, 24980126 - 24979958
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| || |||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  24980126 tgttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataaa 24980027  T
Q  386 cacaagccaaaagtag-aaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||||||||||||| ||||||||| | |||||||| ||||||| |||||||||||||||||||||||    
T  24980026 cacaagccaaaagtagaaaaacaacaacgagagaaaaagaagagagaacacaaaagaatttgttgaccc 24979958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 304 - 452
Target Start/End: Original strand, 18096758 - 18096906
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    |||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18096758 aaattacaccaataacaaacttgatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataaacacaagccaaaagtagaa 18096857  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgacc 452  Q
    ||||||||| ||||| || ||||||| |||||||||||||| |||||||    
T  18096858 aacaacagcgagagagaaagaagagagaacacaaaagaattcgttgacc 18096906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 283 - 451
Target Start/End: Complemental strand, 18163083 - 18162915
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  ||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18163083 aattgttatgaattcgatgaaaaatcacaccaataataaatttgatgtgtggagtaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 18162984  T
Q  383 aatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgac 451  Q
    || |||||||||||||||||||||  |||| |||||||| ||||||| ||||||||| |||||||||||    
T  18162983 aaacacaagccaaaagtagaaaactgcagcgagagaaaaagaagagagaacacaaaaaaatttgttgac 18162915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 283 - 453
Target Start/End: Original strand, 18099007 - 18099177
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    |||||||  ||||||| ||  ||||||||||||||| |||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |    
T  18099007 aattgttgggaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagcaacaaaaatcaaagtgtatggaacaattgt 18099106  T
Q  383 aatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    || ||||||||||||||||||||||||||| ||||| || ||| ||| |||||||||||||||||||||||    
T  18099107 aaacacaagccaaaagtagaaaacaacagcgagagagaaagaaaagagaacacaaaagaatttgttgaccc 18099177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 306 - 450
Target Start/End: Original strand, 27101043 - 27101185
Alignment:
Q  306 atcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaa 405  Q
    ||||||||||||| || ||| ||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  27101043 atcacaccaataacaa-cttgatgtgtggagcaatgaataatcaggcaaccaaaa-caaagtgtatggaacaattataatcacaagcaaaaagtagaaaa 27101140  T
Q  406 caacagcaagagaaaaggaagagataacacaaaagaatttgttga 450  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  27101141 caacagcaagagaaaaggaagagagaacacaaaagaatttgttga 27101185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 283 - 453
Target Start/End: Complemental strand, 3315103 - 3314935
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    |||||||  ||||||| || |||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  3315103 aattgttgcgaattcgatgagaaaacacaccaataataaacttgatgtgtggagcaagggataatcaagcaaccaaaagcaaagtgtatggaacaattat 3315004  T
Q  383 aatcacaagccaaaagtagaaaacaacagcaagaga-aaaggaagagataacacaaaagaatttgttgaccc 453  Q
    || ||||||||||| ||||||   |||||| ||||| ||||||||||| |||||||||||||||||||||||    
T  3315003 aaacacaagccaaacgtagaa---aacagcgagagagaaaggaagagagaacacaaaagaatttgttgaccc 3314935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 307 - 453
Target Start/End: Original strand, 25688021 - 25688167
Alignment:
Q  307 tcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaac 406  Q
    |||||||||||| |||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  25688021 tcacaccaataacaaactttatgtgtggagcaagtgataatcagacaaccaaaatcaaagtgtatggaacaattgtaaacacaagccaaaagtagaaaac 25688120  T
Q  407 aacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    | || | |||||||||||||||| |||||||||||| || |||||||    
T  25688121 atcaacgagagaaaaggaagagagaacacaaaagaactttttgaccc 25688167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 304 - 450
Target Start/End: Complemental strand, 36012225 - 36012080
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| |||| ||||||||||||||||||  ||||||||| ||||||||||||||||||||||| ||||||| ||||||||||    
T  36012225 aaatcacaccaataacaaacttgatgtatggagcaagggataatcaaacaaccaaaa-caaagtgtatggaacaattataaacacaagcgaaaagtagaa 36012127  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttga 450  Q
    ||||||||| |||||||| ||||||| ||||||||||||||||||||    
T  36012126 aacaacagcgagagaaaaagaagagagaacacaaaagaatttgttga 36012080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 53917524 - 53917671
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||| ||||| |||||| ||||||||||||||||||| ||| |||||||||| ||||||||||| ||||||||||| ||||||||||||||||||    
T  53917524 aaatcacactaataacaaacttgatgtgtggagcaagggatagtcaagcaaccaaaa-caaagtgtatgaaacaattataaacacaagccaaaagtagaa 53917622  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||||| |||||||| ||||||| |||||||||||||||||||||||    
T  53917623 aacaacagcgagagaaaa-gaagagagaacacaaaagaatttgttgaccc 53917671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 306 - 453
Target Start/End: Original strand, 4308143 - 4308288
Alignment:
Q  306 atcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaa 405  Q
    ||||||||||||| || ||| ||||||||||||||| ||||||   ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4308143 atcacaccaataacaa-cttgatgtgtggagcaaggaataatccaacaaccaaaa-caaagtgtatggaacaattataatcacaagccaaaagtagaaaa 4308240  T
Q  406 caacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||| |||||||| ||||||| |||||||||||||||||||||||    
T  4308241 caacagcgagagaaaaagaagagagaacacaaaagaatttgttgaccc 4308288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 53915356 - 53915503
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| |||| |||||||||||||| ||| |||||||||| ||| ||||||| ||||||||||| ||||||||||||||||||    
T  53915356 aaatcacaccaataacaaacttgatgtatggagcaagggatagtcaagcaaccaaaaccaa-gtgtatgaaacaattataaacacaagccaaaagtagaa 53915454  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||||| |||||||| ||||||| |||||||||||||||||||||||    
T  53915455 aacaacagcgagagaaaa-gaagagagaacacaaaagaatttgttgaccc 53915503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 303 - 450
Target Start/End: Complemental strand, 43228688 - 43228544
Alignment:
Q  303 gaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtaga 402  Q
    |||||||||||||||| || ||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||| ||| ||||||||||| ||||    
T  43228688 gaaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagcaaccaaaa-caaagtgtatggaacaattaaaat-acaagccaaaattaga 43228592  T
Q  403 aaacaacagcaagagaaaaggaagagataacacaaaagaatttgttga 450  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||||||    
T  43228591 aaacaacagcgagagtaaaggaagagagaacacaaaagaatttgttga 43228544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 27635516 - 27635665
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  27635516 aaatcacaccaataacaaacttgatgtgtggagcaaggaataatcaagcaaccaaaa-caaagtgtatggaacaattataaacacaagccaaaagtagaa 27635614  T
Q  404 aacaacagcaagagaaaag----gaagagataacacaaaagaatttgttgaccc 453  Q
    ||||   || |||||||||    ||||||| |||||||||||||||||||||||    
T  27635615 aaca---gcgagagaaaagaagagaagagagaacacaaaagaatttgttgaccc 27635665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 45883339 - 45883190
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||||||||||||| | | |||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  45883339 aaatcacaccaataacaaacttgatgtgtggagcaagggatagttaagcaaccaaaa-caaagtgtatggaacaattataatcacaagccagaagtagaa 45883241  T
Q  404 aacaacagcaagagaaaag----gaagagataacacaaaagaatttgttgaccc 453  Q
       ||||||||||||||||    ||||||| |||||||||||||||||||||||    
T  45883240 ---aacagcaagagaaaagaagagaagagagaacacaaaagaatttgttgaccc 45883190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 307 - 453
Target Start/End: Complemental strand, 1313800 - 1313659
Alignment:
Q  307 tcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaac 406  Q
    |||||||||||| |||||| ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||    
T  1313800 tcacaccaataacaaacttgatgtgtggagcaagggatagtcaagcaaccaaaa-caaagtgtatggaacaattataaacacaagtcaaaagtagaaaac 1313702  T
Q  407 aacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||   | |||||||| ||||||| |||||||||||||||||||||||    
T  1313701 aa---cgagagaaaa-gaagagagaacacaaaagaatttgttgaccc 1313659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 283 - 453
Target Start/End: Original strand, 43423305 - 43423470
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    |||||||  ||||||| ||  |||| |||||||||| ||| || ||||||||||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  43423305 aattgttgcgaattcgatgaaaaattacaccaataacaaagttgatgtgtggagcaagggatagtcaagcaaccaaaa-caaagtgtatggaacaattat 43423403  T
Q  383 aatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    || ||||||||||||||||||   |||||| |||||||| ||||||| |||||||||||||||||||||||    
T  43423404 aaacacaagccaaaagtagaa---aacagcgagagaaaa-gaagagagaacacaaaagaatttgttgaccc 43423470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 5886598 - 5886448
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||||||||||||||| || |||||||||  |||||||||||||||| |||||||||||||||||||||||||    
T  5886598 aaatcacaccaataacaa-cttgatgtgtggagcaagggataaacaagcaaccaaa--caaagtgtatggaacagttataatcacaagccaaaagtagaa 5886502  T
Q  404 aac---aacagcaag-agaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||   ||||||||| |||||| ||| ||| |||||||||||||||||||||||    
T  5886501 aacaacaacagcaagaagaaaaagaatagagaacacaaaagaatttgttgaccc 5886448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 5900071 - 5899921
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||||||||||||||| || |||||||||  |||||||||||||||| |||||||||||||||||||||||||    
T  5900071 aaatcacaccaataacaa-cttgatgtgtggagcaagggataaacaagcaaccaaa--caaagtgtatggaacagttataatcacaagccaaaagtagaa 5899975  T
Q  404 aacaac---agcaag-agaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||   |||||| |||||| ||| ||| |||||||||||||||||||||||    
T  5899974 aacaacagcagcaagaagaaaaagaatagagaacacaaaagaatttgttgaccc 5899921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 880314 - 880458
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    |||||||||| |||| |||||| |||||||||||||||  |||||| |||||||||| |||||||||||||||| |||||||||||| ||||||||||||    
T  880314 aaatcacacccataacaaacttgatgtgtggagcaaggattaatcaagcaaccaaaa-caaagtgtatggaacagttataatcacaaaccaaaagtagaa 880412  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
       |||||| |||||||| ||||||| |||||||||||||||||||||||    
T  880413 ---aacagcgagagaaaa-gaagagagaacacaaaagaatttgttgaccc 880458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 304 - 452
Target Start/End: Original strand, 9604465 - 9604613
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||| ||||||| | |||||||  ||||||||||| |||||||||||||||| ||||||| |||||    
T  9604465 aaatcacaccaataacaa-cttgatgtgtggagcaaggaataatcaagtaaccaaac-caaagtgtatgaaacaattataatcacaggccaaaaatagaa 9604562  T
Q  404 aacaacagcaagagaaaag--gaagagataacacaaaagaatttgttgacc 452  Q
    ||||||||| |||||||||  ||||||| ||||||||||||||||||||||    
T  9604563 aacaacagcgagagaaaagaagaagagagaacacaaaagaatttgttgacc 9604613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 42990700 - 42990554
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||| |  | ||||||  |||||||||||||||||    
T  42990700 aaatcacaccaataacaaacttgatgtgtggagcaagggataatcaggcaaccaaaa-caaagtgtatgta--agttataaatacaagccaaaagtagaa 42990604  T
Q  404 aacaacagcaag-agaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||| || || |||||||| ||||| |||||||||||||||||||||||    
T  42990603 aacaacggcgagaagaaaagg-agagagaacacaaaagaatttgttgaccc 42990554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 1321880 - 1321729
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  1321880 aaatcacaccaataacaaacttgatgtgtggagcaagggataatcaggcaaccaaaa-caaagtgtatggaacaatta-aat-acaagccaaaagtagaa 1321784  T
Q  404 aacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  1321783 aacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 1321729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 283 - 453
Target Start/End: Complemental strand, 43226498 - 43226335
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    |||||||  ||||||| || |||||||||||||||| || ||| |||||||||||||| |||||||| ||||||||||   ||||||||||||||||||     
T  43226498 aattgttgcgaattcgatgagaaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagcaaccaaaa--caagtgtatggaacaattaa 43226402  T
Q  383 aatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||| ||||||||||||||| |||||||||| |||||||||||||||| |||||  ||||||||||||||||    
T  43226401 aat-acaagccaaaagtag-aaacaacagcgagagaaaaggaagagagaacac--aagaatttgttgaccc 43226335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 6484755 - 6484610
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||| ||||| ||| || ||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  6484755 aaatcacactaataacaaatttgatgtgtggagcaaggaataattaagcaaccaaaatcaaagtgtatggaacaattataaacacaagtcaaaagtagaa 6484656  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||   || ||||| ||  |||||| |||||||||||||||||||||||    
T  6484655 aaca---gcgagagagaat-aagagagaacacaaaagaatttgttgaccc 6484610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 12267837 - 12267982
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    |||| |||||||||| ||| || |||||||||||| || ||| ||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  12267837 aaattacaccaataacaaatttgatgtgtggagcagggaatagtcaagcaaccaaaa-caaagtgtatggaacaattataaacacaagccaaaagtagaa 12267935  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||   | ||||| || ||||||| |||||||||||||||||||||||    
T  12267936 aacaa---cgagagagaaagaagagagaacacaaaagaatttgttgaccc 12267982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 304 - 444
Target Start/End: Original strand, 32263899 - 32264036
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||| ||||| ||| || |||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  32263899 aaatcacactaataacaaatttgatgtgtggagcaagtgataatcagacaaccaaaa-caaagtgtatggaacaattataaacacaagccaaaagtagaa 32263997  T
Q  404 aacaacagcaagaga-aaaggaagagataacacaaaagaatt 444  Q
       |||||| ||||| ||||||||||| ||||||||||||||    
T  32263998 ---aacagcgagagagaaaggaagagagaacacaaaagaatt 32264036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 43421278 - 43421422
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| ||| || ||||||||||||||  ||| ||| |||||||||| ||||||||||||||||||||||| ||||||||||||||| ||    
T  43421278 aaatcacaccaataacaaagttgatgtgtggagcaagatatagtcaagcaaccaaaa-caaagtgtatggaacaattataaacacaagccaaaagtataa 43421376  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
       |||||| |||||||| ||||||| |||||||||||||||||||||||    
T  43421377 ---aacagcgagagaaaa-gaagagagaacacaaaagaatttgttgaccc 43421422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 285 - 452
Target Start/End: Original strand, 54691416 - 54691580
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    ||||| |||||||| || |||| |||| |||||| ||| ||| ||||||||||||| ||||||||||||||||||| |||| |||||| |||||||||||    
T  54691416 ttgttgtgaattcgatgagaaaacacatcaataacaaattta-tgtgtggagcaagtgataatcaggcaaccaaaa-caaaatgtatgaaacaattataa 54691513  T
Q  385 tcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgacc 452  Q
     |||||||||||||||||||||||| |  |||| ||||||||||| |||| |||||||||||| ||||    
T  54691514 acacaagccaaaagtagaaaacaaccgagagag-aaaggaagagaaaacataaaagaatttgtcgacc 54691580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 283 - 452
Target Start/End: Original strand, 28101845 - 28102008
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  |||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||  | ||||  |    
T  28101845 aattgttgtgaattcgatgaaaaattacaccaataataaacttgatgtgtggagcaagggataatcaagcaaccaaaatcaaagtggat--agcaat--t 28101940  T
Q  383 aatcacaagccaaaagtagaaaacaacagcaagaga-aaaggaagagataacacaaaagaatttgttgacc 452  Q
    || ||||| ||||||||||||   |||||| ||||| ||||||||||| ||||||||||||||||||||||    
T  28101941 aaacacaacccaaaagtagaa---aacagcgagagagaaaggaagagagaacacaaaagaatttgttgacc 28102008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 308 - 452
Target Start/End: Original strand, 1626548 - 1626689
Alignment:
Q  308 cacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaaca 407  Q
    ||||||||||| |||||| ||||||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||| |||||| |||||||  ||||||    
T  1626548 cacaccaataacaaacttgatgtgtggagcaaggaataatcaagcaacaaaaa-caaagtgtatggaacaattataaacacaagtcaaaagtgaaaaaca 1626646  T
Q  408 acagcaagagaaaaggaagagataacacaaaagaatttgttgacc 452  Q
    || |  |||| ||||||||||| ||||||||||||||||||||||    
T  1626647 ac-gagagag-aaaggaagagagaacacaaaagaatttgttgacc 1626689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 304 - 452
Target Start/End: Complemental strand, 11168502 - 11168352
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  11168502 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaatcaaagtgtatggaacaatta-aat-acaagccaaaagtagaa 11168406  T
Q  404 aacaacagcaag----agaaaaggaagag-ataacacaaaagaatttgttgacc 452  Q
    |||||| || ||    | |||| |||||| | ||||||||||||||||||||||    
T  11168405 aacaacggcgagaagaacaaaaagaagagaagaacacaaaagaatttgttgacc 11168352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 307 - 452
Target Start/End: Original strand, 880106 - 880246
Alignment:
Q  307 tcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaac 406  Q
    ||||||||||||||||||| |||||||||| |||| ||||||| ||||  |||| ||||||||||| |||| |||||||||||| |||||||||||||||    
T  880106 tcacaccaataataaacttgatgtgtggagtaaggaataatcaagcaaagaaaa-caaagtgtatgaaacagttataatcacaaaccaaaagtagaaaac 880204  T
Q  407 aacagcaagagaaaaggaagagataacacaaaagaatttgttgacc 452  Q
    ||   | |||||||| ||||||| ||||||||||||||||||||||    
T  880205 aa---cgagagaaaa-gaagagagaacacaaaagaatttgttgacc 880246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 286 - 448
Target Start/End: Complemental strand, 3307176 - 3307015
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaa-cttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    |||| |||||||| || |||| ||||||||||| ||| ||| |||| || |||||||||||||||  ||| ||||| ||||||||||| |||||||||||    
T  3307176 tgttgtgaattcgatgagaaaacacaccaataacaaaacttgatgtatgaagcaagggataatcaaacaatcaaaaacaaagtgtatgaaacaattataa 3307077  T
Q  385 tcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgtt 448  Q
     |||||||||||||||||||||| | | ||||| ||||||||||| ||||||||||||||||||    
T  3307076 acacaagccaaaagtagaaaacagc-gaaagag-aaaggaagagagaacacaaaagaatttgtt 3307015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 286 - 453
Target Start/End: Complemental strand, 15781293 - 15781129
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  ||| ||||||||||| |||||| |||||||||| |||||||||||| |||  |||||| ||||||||||||||| ||||||     
T  15781293 tgttgtgaattcgatggaaaaacacaccaataacaaacttgatgtgtggagtaagggataatcaagcaggcaaaat-aaagtgtatggaacagttataaa 15781195  T
Q  386 cacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||| ||||||||||||||||| |  |||||||| ||||||| || ||||||||||||||||||||    
T  15781194 cacaagtcaaaagtagaaaacaac-gagagagaaaa-gaagagagaaaacaaaagaatttgttgaccc 15781129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 275 - 453
Target Start/End: Complemental strand, 38890471 - 38890290
Alignment:
Q  275 tataatata-attgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatgg 373  Q
    ||||||||| |||||| |||||||  |  |||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||||||||| ||||||    
T  38890471 tataatatatattgttgtgaattctatccgaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaatcaaagcgtatgg 38890373  T
Q  374 aacaattataatcacaagccaaaagtagaaaacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||||| ||| ||||||||||||||||||||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  38890372 aacaatta-aat-acaagccaaaagtagaaaacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 38890290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 41849453 - 41849309
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| ||||||||||| ||   ||||||  |||||||||||||||||    
T  41849453 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatgaaag--ttataaatacaagccaaaagtagaa 41849358  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||| |  |||||||| ||||||| |||||||||||||||||||||||    
T  41849357 aacaac-gagagagaaaaagaagagagaacacaaaagaatttgttgaccc 41849309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 313 - 453
Target Start/End: Original strand, 48361538 - 48361678
Alignment:
Q  313 caataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaacaacagc 412  Q
    |||||| ||||||||||| |||| ||| | ||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||   |    
T  48361538 caataacaaacttaatgtatggaacaatgaataatcaagcaaccaaaa-caaagtgtatggaacaattataatcacaagtcaaaagtagaaaacaa---c 48361633  T
Q  413 aagagaaaag----gaagagataacacaaaagaatttgttgaccc 453  Q
     |||||||||    ||||||| |||||||||||||||||||||||    
T  48361634 gagagaaaagaagagaagagagaacacaaaagaatttgttgaccc 48361678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 304 - 452
Target Start/End: Complemental strand, 28181399 - 28181255
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||||||||| | |||||  ||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  28181399 aaatcacaccaataacaaacttgatgtgtggagcaagg-acaatcaaacaaccaaaa-caaagtgtatggaacaattataaacacaagccaaaagtagaa 28181302  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgacc 452  Q
    |||| | |  |||||||| ||||||| ||||||  ||||||||||||||    
T  28181301 aacagc-gacagagaaaa-gaagagagaacacaggagaatttgttgacc 28181255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 315 - 453
Target Start/End: Complemental strand, 51943758 - 51943620
Alignment:
Q  315 ataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaacaacagcaa 414  Q
    |||| |||||| ||||||||||||||||||| ||| |||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||   || |    
T  51943758 ataacaaacttgatgtgtggagcaagggatagtcaagcaaccaaaa-caaagtgtttggaacaattataaacacaagccaaaagtagaaaaca---gcga 51943663  T
Q  415 gagaaaag----gaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||||    ||||||| ||||||| |||||||||||||||    
T  51943662 gagaaaagaagagaagagagaacacaagagaatttgttgaccc 51943620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 10955884 - 10956034
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  10955884 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaagccaaaagtagaa 10955979  T
Q  404 aacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  10955980 aacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 10956034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 308 - 453
Target Start/End: Original strand, 53468318 - 53468460
Alignment:
Q  308 cacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaaca 407  Q
    ||||||||||| |||||| ||||||||||||| | |||||   ||| |||||| ||||||||||||||||||||||| |||||| ||||||||||||| |    
T  53468318 cacaccaataacaaacttgatgtgtggagcaatgaataatggagcagccaaaa-caaagtgtatggaacaattataaacacaagtcaaaagtagaaaata 53468416  T
Q  408 acagcaagaga-aaaggaagagataacacaaaagaatttgttgaccc 453  Q
       || ||||| ||||||||||| |||||||||||||||||||||||    
T  53468417 ---gcgagagagaaaggaagagagaacacaaaagaatttgttgaccc 53468460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 304 - 450
Target Start/End: Complemental strand, 4666910 - 4666767
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||||||| || |||||||||| ||| ||| |||| ||||||||||| |||||||||| |||||||||||  |||| ||||||||| ||    
T  4666910 aaatcacaccaataataaatttgatgtgtggagtaagtgattatcatgcaaccaaaat-aaagtgtatgaaacaattataaaaacaaaccaaaagtataa 4666812  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttga 450  Q
    |||| | |  |||||||| ||||||| ||||||||||||||||||||    
T  4666811 aacagc-gagagagaaaa-gaagagagaacacaaaagaatttgttga 4666767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 304 - 452
Target Start/End: Original strand, 51674627 - 51674772
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaa-gtgtatggaacaattataatcacaagccaaaagtaga 402  Q
    ||||||||||||||| |||||| |||| |||||||||| ||||||| |||||||||  |||  | ||||||||||| ||||| |||||||||||||||||    
T  51674627 aaatcacaccaataacaaacttgatgtatggagcaaggaataatcaagcaaccaaa--caagtgggtatggaacaaatataaacacaagccaaaagtaga 51674724  T
Q  403 aaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgacc 452  Q
    ||||| | |  |||||||| ||||||| ||||||||||||||||||||||    
T  51674725 aaacagc-gagagagaaaa-gaagagagaacacaaaagaatttgttgacc 51674772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 286 - 409
Target Start/End: Complemental strand, 747177 - 747057
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  ||||||||||||||| || ||| ||||||||||||||||||||||| ||||||||||||||||||||||  | | ||||||     
T  747177 tgttgtgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaatcaaagtgtatg--aaagttataaa 747081  T
Q  386 cacaagccaaaagtagaaaacaac 409  Q
     |||||||||||||||||||||||    
T  747080 tacaagccaaaagtagaaaacaac 747057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 304 - 408
Target Start/End: Complemental strand, 5192051 - 5191951
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  5192051 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaagccaaaagtagaa 5191956  T
Q  404 aacaa 408  Q
    |||||    
T  5191955 aacaa 5191951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 286 - 409
Target Start/End: Original strand, 28761287 - 28761406
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  |||||||||||||||||| ||| |||||||||||||| ||||||||  |||||||||| ||||||||||||  |||||||||    
T  28761287 tgttgtgaattcgatgaaaaatcacaccaataataatcttgatgtgtggagcaagtgataatcaaacaaccaaaat-aaagtgtatgga--aattataat 28761383  T
Q  386 cacaagccaaaagtagaaaacaac 409  Q
    |||||| |||||||||||||||||    
T  28761384 cacaag-caaaagtagaaaacaac 28761406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 304 - 452
Target Start/End: Original strand, 51726864 - 51727013
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||| |||||  ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  51726864 aaatcacaccaataacaa-cttgatgtgtggggcaaga-ataatcaggcaaccaaaatcaaagtgtatggaacaatta-aat-acaagccaaaagtagaa 51726959  T
Q  404 aacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgacc 452  Q
    |||||| || || ||||   || |||||| | ||||||||||||||||||||||    
T  51726960 aacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgacc 51727013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 10084246 - 10084347
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| |||||||||||| ||||||| ||| |||||||||||||||||    
T  10084246 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatgggacaatta-aat-acaagccaaaagtagaa 10084341  T
Q  404 aacaac 409  Q
    ||||||    
T  10084342 aacaac 10084347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 10191169 - 10191270
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| |||||||||||| ||||||| ||| |||||||||||||||||    
T  10191169 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatgggacaatta-aat-acaagccaaaagtagaa 10191264  T
Q  404 aacaac 409  Q
    ||||||    
T  10191265 aacaac 10191270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 283 - 409
Target Start/End: Original strand, 6065630 - 6065753
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    |||||||  ||||||| ||  ||||||||||||||| || ||| ||||||||||||||||||||| | ||||||||||||||||||||||  | | ||||    
T  6065630 aattgttgcgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagcaaccaaaatcaaagtgtatg--aaagttat 6065726  T
Q  383 aatcacaagccaaaagtagaaaacaac 409  Q
    ||  |||||||||||||||||||||||    
T  6065727 aaatacaagccaaaagtagaaaacaac 6065753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 321 - 408
Target Start/End: Complemental strand, 11170755 - 11170670
Alignment:
Q  321 aacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaacaa 408  Q
    ||||| |||||||||| |||||||||||| ||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||    
T  11170755 aacttgatgtgtggagtaagggataatcaagcaaccaaaatcaaagtgtatggaataatta-aat-acaagccaaaagtagaaaacaa 11170670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 307 - 453
Target Start/End: Original strand, 5926630 - 5926771
Alignment:
Q  307 tcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaac 406  Q
    |||||||||||| |||||| ||||||| || |||| ||||||| | |||||||| ||||||||| ||||||||||||| |||||| ||||||||||||||    
T  5926630 tcacaccaataacaaacttcatgtgtgaagtaaggaataatcaagtaaccaaaa-caaagtgtaaggaacaattataaacacaag-caaaagtagaaaac 5926727  T
Q  407 aacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||| |  |||| ||||||| ||| ||||| |||||||||||||||||    
T  5926728 aac-gagagag-aaaggaaaagagaacac-aaagaatttgttgaccc 5926771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 6232191 - 6232050
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||| ||||| ||| || |||||||||| ||    |||||| ||||||||||| |||||||||||||||||||||| |||||| ||||| || ||    
T  6232191 aaatcacactaataacaaatttgatgtgtggagtaa----taatcaagcaaccaaaat-aaagtgtatggaacaattataaacacaagtcaaaaataaaa 6232097  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||   || ||||| || ||||||| |||||||||||||||||||||||    
T  6232096 aaca---gcgagagagaaagaagagagaacacaaaagaatttgttgaccc 6232050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 409
Target Start/End: Original strand, 10958160 - 10958281
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  ||||||||||||||| || ||| |||||||||||||| |||||||| |||||||||| |||||||||| |||||||||     
T  10958160 aattgttgtgaattcgatga-aaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagcaaccaaaa-caaagtgtatagaacaatta- 10958255  T
Q  383 aatcacaagccaaaagtagaaaacaac 409  Q
    ||| |||||||||||||||||||||||    
T  10958256 aat-acaagccaaaagtagaaaacaac 10958281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 5522483 - 5522634
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||| ||| |||||||||||||||||||| |  | | ||||||  |||||||||||||||||    
T  5522483 aaatcacaccaataacaa-cttgatgtgtggagcaagggatagtcaagcaaccaaaatcaaagtgtaag--aaagttataaatacaagccaaaagtagaa 5522579  T
Q  404 aacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  5522580 aacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 5522634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 286 - 448
Target Start/End: Complemental strand, 17795669 - 17795514
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  ||||||||||||||||||| || |||||||||||||  |||| ||| ||||||||||| ||| ||||||||  | |||||||    
T  17795669 tgttgtgaattcgatgaaaaatcacaccaataataaatttgatgtgtggagcaactgatagtcaagcaaccaaaat-aaaatgtatgga--agttataat 17795573  T
Q  386 cacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgtt 448  Q
    |||||  ||||||||||||||||   | ||||||||| |||||| ||||||| ||||||||||    
T  17795572 cacaa-acaaaagtagaaaacaa---cgagagaaaagaaagagagaacacaagagaatttgtt 17795514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 286 - 448
Target Start/End: Complemental strand, 19104109 - 19103954
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  ||||||||||||||||||| || |||||||||||||  |||| ||| ||||||||||| ||| ||||||||  | |||||||    
T  19104109 tgttgtgaattcgatgaaaaatcacaccaataataaatttgatgtgtggagcaactgatagtcaagcaaccaaaat-aaaatgtatgga--agttataat 19104013  T
Q  386 cacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgtt 448  Q
    |||||  ||||||||||||||||   | ||||||||| |||||| ||||||| ||||||||||    
T  19104012 cacaa-acaaaagtagaaaacaa---cgagagaaaagaaagagagaacacaagagaatttgtt 19103954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 363 - 452
Target Start/End: Complemental strand, 39715804 - 39715716
Alignment:
Q  363 aaagtgtatggaacaattataatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgacc 452  Q
    |||||||||||||||||||||| |||||||||||||||||||||| | |  ||||||| | |||||| ||||||||||||||||||||||    
T  39715804 aaagtgtatggaacaattataaacacaagccaaaagtagaaaacagc-gagagagaaaggaaagagagaacacaaaagaatttgttgacc 39715716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 340 - 452
Target Start/End: Original strand, 47148792 - 47148901
Alignment:
Q  340 gggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaa 439  Q
    ||||||||||  ||||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||| |  |||| ||||||||||| |||||| ||    
T  47148792 gggataatcaaacaaccaaaa-caaagtgtatggaacaattataaacacaagtcaaaagtagaaaacaac-gagagag-aaaggaagagagaacacagaa 47148888  T
Q  440 gaatttgttgacc 452  Q
     ||||||||||||    
T  47148889 taatttgttgacc 47148901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 282 - 409
Target Start/End: Complemental strand, 25533846 - 25533724
Alignment:
Q  282 taattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaatta 381  Q
    ||||||||  ||||||| ||  ||||||||||||||| || ||| |||||||||||||| |||| ||| |||||||||| ||||||||||||||||||||    
T  25533846 taattgttgcgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagcaagagata-tcaagcaaccaaaa-caaagtgtatggaacaatta 25533750  T
Q  382 taatcacaagccaaaagtagaaaacaac 409  Q
     ||| |||||||||||||||||||||||    
T  25533749 -aat-acaagccaaaagtagaaaacaac 25533724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 304 - 405
Target Start/End: Original strand, 22114160 - 22114258
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||  || ||| ||||||||||||||||||||||| ||||||||||||||||||||||  | | ||||||  |||||||||||||||||    
T  22114160 aaatcacaccaatagcaa-cttgatgtgtggagcaagggataatcaagcaaccaaaatcaaagtgtatg--aaagttataaatacaagccaaaagtagaa 22114256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 285 - 407
Target Start/End: Complemental strand, 53591598 - 53591477
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    ||||| |||||||  || |||| |||| |||||| ||| || ||||||||| ||||||||||||| |||||||||| |||| ||||||||||||||||||    
T  53591598 ttgttgtgaattcaatgagaaaacacatcaataacaaatttgatgtgtggaacaagggataatcaagcaaccaaaa-caaaatgtatggaacaattataa 53591500  T
Q  385 tcacaagccaaaagtagaaaaca 407  Q
     || ||| |||||| ||||||||    
T  53591499 acataagtcaaaagcagaaaaca 53591477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 409
Target Start/End: Complemental strand, 458711 - 458584
Alignment:
Q  277 taatataattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaac 376  Q
    |||||| |||||| |||||||| ||  ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| ||||| |||||  |     
T  458711 taatattattgttgtgaattcgatga-aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagcgtatg--aa 458617  T
Q  377 aattataatcacaagccaaaagtagaaaacaac 409  Q
    | ||||||  |||||||||||||||||||||||    
T  458616 agttataaatacaagccaaaagtagaaaacaac 458584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 342 - 453
Target Start/End: Original strand, 8183035 - 8183141
Alignment:
Q  342 gataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaaga 441  Q
    |||| ||| ||||||||||| || ||||||||||||||||||| |||||| |||||||||||   ||| |||||||||||  |||||| |||||||||||    
T  8183035 gatagtcaagcaaccaaaat-aaggtgtatggaacaattataaacacaagtcaaaagtagaa---aactgcaagagaaaa-aaagagagaacacaaaaga 8183129  T
Q  442 atttgttgaccc 453  Q
    ||||||||||||    
T  8183130 atttgttgaccc 8183141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 405
Target Start/End: Original strand, 53893911 - 53894009
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| |||||||||||||| ||||| |||   |||||||||||||||    
T  53893911 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatggaataatta-aatacaaagccaaaagtagaa 53894007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 321 - 412
Target Start/End: Original strand, 7606476 - 7606566
Alignment:
Q  321 aacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagcc-aaaagtagaaaacaacagc 412  Q
    ||||| |||||||||||||| |||| ||| ||||||||||||||||||||||||||||||| ||| ||| ||| |||||||||||||||||||    
T  7606476 aacttgatgtgtggagcaagagatagtcaagcaaccaaaatcaaagtgtatggaacaatta-aat-acaggccaaaaagtagaaaacaacagc 7606566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 283 - 409
Target Start/End: Original strand, 10621363 - 10621487
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaacc-aaaatcaaagtgtatggaacaatta 381  Q
    ||||||| |||||||| ||  ||||||||||||||| || ||| ||||||||||||||||||||| | |||||| |||| |||||||||||  | | |||    
T  10621363 aattgttgtgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagcaaccaaaaaccaaagtgtatg--aaagtta 10621459  T
Q  382 taatcacaagccaaaagtagaaaacaac 409  Q
    |||  |||||||||||||||||||||||    
T  10621460 taaatacaagccaaaagtagaaaacaac 10621487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 393 - 453
Target Start/End: Complemental strand, 30006151 - 30006091
Alignment:
Q  393 caaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||    
T  30006151 caaaagtagaaaacaacagcgagagaaaaagaagagagaacacaaaagaatttgttgaccc 30006091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 283 - 409
Target Start/End: Complemental strand, 456328 - 456207
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| ||||| |||||  | | ||||    
T  456328 aattgttgtgaattcgatga-aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagcgtatg--aaagttat 456234  T
Q  383 aatcacaagccaaaagtagaaaacaac 409  Q
    ||  |||||||||||||||||||||||    
T  456233 aaatacaagccaaaagtagaaaacaac 456207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 286 - 409
Target Start/End: Complemental strand, 50494417 - 50494298
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  ||||||||||||||| || ||| |||||||||||||| |||||| | |||||||||| ||||| |||||||| ||||| |||    
T  50494417 tgttgtgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagcaagagataattaagcaaccaaaa-caaagcgtatggaataatta-aat 50494321  T
Q  386 cacaagccaaaagtagaaaacaac 409  Q
     |||||||||||||||||||||||    
T  50494320 -acaagccaaaagtagaaaacaac 50494298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 409
Target Start/End: Complemental strand, 25389307 - 25389205
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagcc-aaaagtaga 402  Q
    |||||| |||||||| || ||| ||||||||||||||||||||||| |||||||||| |||||||||||||| ||||| ||| ||||||| |||||||||    
T  25389307 aaatcataccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatggaataatta-aat-acaagccaaaaagtaga 25389212  T
Q  403 aaacaac 409  Q
    |||||||    
T  25389211 aaacaac 25389205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 408
Target Start/End: Original strand, 47701538 - 47701638
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| |||||   | ||||  ||||||| ||||| |||| ||||||||||||||||||||| | ||||||||||||||||||    
T  47701538 aaatcacaccaataacaaacttgatgtg---atcaagtaataatcaagcaacgaaaa-caaagtgtatggaacaattatgaacacaagccaaaagtagaa 47701633  T
Q  404 aacaa 408  Q
    |||||    
T  47701634 aacaa 47701638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 283 - 453
Target Start/End: Complemental strand, 23633865 - 23633703
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  ||||||||||||||| | |||  ||||||| |||||| || ||||| |||||||||| ||||||||||||||   ||||    
T  23633865 aattgttgtgaattcgatgaaaaatcacaccaataa-atactagatgtgtgaagcaagtgaaaatcaagcaaccaaaa-caaagtgtatggaat--ttat 23633770  T
Q  383 aatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    || ||||||||| |||||||||||| |    ||||||| | |||||| |||||||||||||||||| ||||    
T  23633769 aaacacaagccacaagtagaaaacatcg---agagaaa-gaaagagagaacacaaaagaatttgtttaccc 23633703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 336 - 405
Target Start/End: Original strand, 35919018 - 35919085
Alignment:
Q  336 gcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaa 405  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||| | |||||||||||||||||    
T  35919018 gcaagggataatcagacaaccaaaatcaaagtgtatggaacaatta-aat-agaagccaaaagtagaaaa 35919085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 327 - 405
Target Start/End: Complemental strand, 26720925 - 26720850
Alignment:
Q  327 atgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaa 405  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||  | ||||||  |||||||||||||||||||    
T  26720925 atgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatgga--agttataaatacaagccaaaagtagaaaa 26720850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 286 - 409
Target Start/End: Complemental strand, 38210789 - 38210670
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  ||||||||||||||| || ||| |||||||||||||||||| ||||  ||| ||||| ||||| |||||||| ||||| |||    
T  38210789 tgttgtgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggattatcaaacaaacaaaa-caaagcgtatggaataatta-aat 38210693  T
Q  386 cacaagccaaaagtagaaaacaac 409  Q
     |||||||||||||||||||||||    
T  38210692 -acaagccaaaagtagaaaacaac 38210670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 375
Target Start/End: Complemental strand, 42992782 - 42992712
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaa 375  Q
    ||||||||| ||||| |||||| |||||| ||||||||||||||||| ||||||||| ||||||||||||||    
T  42992782 aaatcacactaataacaaacttgatgtgtagagcaagggataatcagacaaccaaaa-caaagtgtatggaa 42992712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 307 - 409
Target Start/End: Complemental strand, 3859908 - 3859809
Alignment:
Q  307 tcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaac 406  Q
    |||||||||||| || ||| |||||||||  |||||||| | | |||||||||| ||||||||||| |||||||| ||| ||||||||||||||||||||    
T  3859908 tcacaccaataacaa-cttgatgtgtggaataagggatagttaagcaaccaaaa-caaagtgtatgaaacaattaaaat-acaagccaaaagtagaaaac 3859812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 6063301 - 6063403
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    |||||||||| |||| || ||| ||||||||| ||||||||||| | |||||||||||||||| |||||  | | ||||||  |||||||||||||||||    
T  6063301 aaatcacaccgataacaa-cttgatgtgtggaacaagggataattaagcaaccaaaatcaaagcgtatg--aaagttataaatacaagccaaaagtagaa 6063397  T
Q  404 aacaac 409  Q
    ||||||    
T  6063398 aacaac 6063403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 285 - 453
Target Start/End: Complemental strand, 31151755 - 31151595
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    ||||| |||||||| ||  ||||||||||||||| | |||| ||||||||||||||  ||||||| |||||||||| |||||||||||||  | ||||||    
T  31151755 ttgttgtgaattcgatgaaaaatcacaccaataa-atacttgatgtgtggagcaagtaataatcaagcaaccaaaa-caaagtgtatgga--agttataa 31151660  T
Q  385 tcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
     ||||||  || ||||||||  |||||| |||||||| ||||||| ||||||  |||||||||| ||||    
T  31151659 acacaag-taagagtagaaa--aacagcgagagaaaa-gaagagagaacacatgagaatttgtttaccc 31151595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 407
Target Start/End: Original strand, 561641 - 561739
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| | |||| |||||||||| |||  ||||||| |||||||||  |||||||||||||  | |||||| |||||| |||||||||||    
T  561641 aaatcacaccaataaaatacttgatgtgtggagtaagtaataatcaagcaaccaaa--caaagtgtatgga--agttataaacacaag-caaaagtagaa 561735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 409
Target Start/End: Original strand, 28412868 - 28412988
Alignment:
Q  284 attgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattata 383  Q
    |||||| |||||||| ||  ||| ||||||||||| || ||| ||||||||||||||||||||||| | ||||||||   |||||||||  | | |||||    
T  28412868 attgttgtgaattcgatgaaaaaacacaccaataacaa-cttgatgtgtggagcaagggataatcaagtaaccaaaa--caagtgtatg--aaagttata 28412962  T
Q  384 atcacaagccaaaagtagaaaacaac 409  Q
    |  ||||| |||||||||||||||||    
T  28412963 aatacaagtcaaaagtagaaaacaac 28412988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 387 - 453
Target Start/End: Complemental strand, 42992586 - 42992520
Alignment:
Q  387 acaagccaaaagtagaaaacaacagcaaga-gaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||||||||||||||||||| || ||| |||||||| |||| ||||||||| |||||||||||||    
T  42992586 acaagccaaaagtagaaaacaacggcgagaagaaaagga-gagagaacacaaaaaaatttgttgaccc 42992520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 283 - 409
Target Start/End: Complemental strand, 53597647 - 53597528
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  ||||||||||||||| | |||| |||||||||||||   ||||||| |||||||| ||||| |||   |||| ||||||    
T  53597647 aattgttgtgaattcgatga-aaatcacaccaataaaatactttatgtgtggagcaa--aataatcaagcaaccaatatcaacgtg---ggaagaattat 53597554  T
Q  383 aatcacaagccaaaagtagaaaacaac 409  Q
    || |||||| ||||| |||||||||||    
T  53597553 aaacacaag-caaaaatagaaaacaac 53597528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 117; Significance: 2e-59; HSPs: 67)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 304 - 452
Target Start/End: Original strand, 36402188 - 36402336
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||    
T  36402188 aaatcacaccaataacaaacttgatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatagaacaattataaacacaagctaaaagtagaa 36402287  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgacc 452  Q
    ||||||||| |||||||| ||||||| ||||||||||||||||||||||    
T  36402288 aacaacagcgagagaaaaagaagagagaacacaaaagaatttgttgacc 36402336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 308 - 452
Target Start/End: Original strand, 2818199 - 2818343
Alignment:
Q  308 cacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaaca 407  Q
    ||||||||||| |||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2818199 cacaccaataacaaacttgatgtatggagcaagggataatcaggcatccaaaatcaaagtgtatggaacaattataaacacaagccaaaagtagaaaaca 2818298  T
Q  408 acagcaagagaaaaggaagagataacacaaaagaatttgttgacc 452  Q
    ||||| |||||||| ||||||| ||||||||||||||||||||||    
T  2818299 acagcgagagaaaaagaagagagaacacaaaagaatttgttgacc 2818343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 304 - 452
Target Start/End: Complemental strand, 39854903 - 39854754
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    |||||||||||||||||||||| || |||||||||||||||| | | ||||||||||  |||||||||||||||||||||| ||||||||||||||| ||    
T  39854903 aaatcacaccaataataaacttgatatgtggagcaagggatagttaagcaaccaaaaataaagtgtatggaacaattataaacacaagccaaaagtaaaa 39854804  T
Q  404 aacaacagcaagag-aaaaggaagagataacacaaaagaatttgttgacc 452  Q
    ||||||||| |||| |||||||||||| ||||||||||||||||||||||    
T  39854803 aacaacagcgagagaaaaaggaagagagaacacaaaagaatttgttgacc 39854754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 288 - 453
Target Start/End: Complemental strand, 16776592 - 16776427
Alignment:
Q  288 ttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatca 387  Q
    |||||||||| |||  ||||||||||||||| |||||| ||||||||||||||| |||||||||||| ||||| ||||||||||| |||||||||||| |    
T  16776592 ttttgaattcattgaaaaatcacaccaataacaaacttgatgtgtggagcaaggaataatcaggcaatcaaaa-caaagtgtatgaaacaattataat-a 16776495  T
Q  388 caagccaaaagtagaaaacaacagcaagagaaaaggaaga--gataacacaaaagaatttgttgaccc 453  Q
    ||||||||||||||||||||||||| |||||||| |||||  || |||||||||||||||||||||||    
T  16776494 caagccaaaagtagaaaacaacagcgagagaaaaagaagagcgagaacacaaaagaatttgttgaccc 16776427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 2724309 - 2724163
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||  ||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  2724309 aaatcacaccaataacaaacttgatgtgtatagcaagggataatcaagcaaccaaaa-caaagtgtatggaacaattataaacacaagccaaaagtagaa 2724211  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||| | | |||| |||||||||||| |||||||||||||||||||||||    
T  2724210 aacagc-gaaaga-aaaaggaagagagaacacaaaagaatttgttgaccc 2724163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 283 - 452
Target Start/End: Original strand, 18511053 - 18511220
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    |||||||  ||||||| ||  |||||||| |||||| |||||| ||||||||||||||||||| ||| ||||| |||| ||||||||||| |||||||||    
T  18511053 aattgttgcgaattcgatgataaatcacatcaataacaaacttgatgtgtggagcaagggatagtcaagcaactaaaa-caaagtgtatgaaacaattat 18511151  T
Q  383 aatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgacc 452  Q
    || ||||||| ||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||    
T  18511152 aaacacaagcaaaaagtagaaaacaacagcgagagaaaa-gaagagagaacacaaaagaatttgttgacc 18511220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 283 - 453
Target Start/End: Complemental strand, 6745510 - 6745338
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaat--caaagtgtatggaacaatt 380  Q
    |||||||  ||||||| || |||| ||||||||||| |||||| |||||||||||||| |||| ||| ||| ||||||   |||||||||||||||||||    
T  6745510 aattgttgcgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaagagatagtcaagcagccaaaaaaacaaagtgtatggaacaatt 6745411  T
Q  381 ataatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||| |||||||||||||| |||||||||||| ||||||||| |  ||| |||||||||||||||||||||||    
T  6745410 ataaacacaagccaaaagtcgaaaacaacagcgagagaaaagaataagagaacacaaaagaatttgttgaccc 6745338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 303 - 453
Target Start/End: Complemental strand, 6747726 - 6747574
Alignment:
Q  303 gaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatca--aagtgtatggaacaattataatcacaagccaaaagta 400  Q
    |||| ||||||||||| |||||| |||||| ||||||| |||||||| |||||||||| ||  ||||||||||||||||||||| ||||||||||||||     
T  6747726 gaaaacacaccaataacaaacttgatgtgtagagcaagagataatcaagcaaccaaaaacacaaagtgtatggaacaattataaacacaagccaaaagtc 6747627  T
Q  401 gaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||||||||| ||||||||| |  ||| |||||||||||||||||||||||    
T  6747626 gaaaacaacagcgagagaaaagaagaagagaacacaaaagaatttgttgaccc 6747574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 285 - 453
Target Start/End: Complemental strand, 24127292 - 24127126
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    ||||| |||||||| ||  ||||||||| ||||| ||||||||||||||||||||||||||||||| |||| |||| ||||||||||| |||||||||||    
T  24127292 ttgttgtgaattcgatgaaaaatcacacaaataacaaacttaatgtgtggagcaagggataatcagacaacaaaaaacaaagtgtatgaaacaattataa 24127193  T
Q  385 tcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
     || ||| ||||||||||||||||| |  |||| |||| |||||| |||||||||||||||||||||||    
T  24127192 acataagtcaaaagtagaaaacaac-gagagag-aaagaaagagagaacacaaaagaatttgttgaccc 24127126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 658221 - 658365
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| ||| || ||||||||||||||| |||||||||||||||||| ||||||||| |||||||| |||| || |||||||||||||||    
T  658221 aaatcacaccaataacaaatttgatgtgtggagcaaggaataatcaggcaaccaaaa-caaagtgtacggaacaataataaacataagccaaaagtagaa 658319  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
       ||||||||||||||| ||||||| |||||||||||||||||||||||    
T  658320 ---aacagcaagagaaaa-gaagagagaacacaaaagaatttgttgaccc 658365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 283 - 453
Target Start/End: Original strand, 20505684 - 20505852
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaa--tcaaagtgtatggaacaatt 380  Q
    ||||||| |||||||  || |||| ||||||||||| |||||| ||||||||||||||  ||||||||||||||||||  ||||||||||||||||||||    
T  20505684 aattgttgtgaattcaatgagaaaacacaccaataacaaacttgatgtgtggagcaagtaataatcaggcaaccaaaaaatcaaagtgtatggaacaatt 20505783  T
Q  381 ataatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||| |||||||||||| |||||||||||    ||||||||  |||||| |||||||||||||||||||||||    
T  20505784 ataaacacaagccaaaactagaaaacaacg---agagaaaat-aagagagaacacaaaagaatttgttgaccc 20505852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 308 - 453
Target Start/End: Original strand, 17818357 - 17818501
Alignment:
Q  308 cacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaaca 407  Q
    ||||||||||| |||||| ||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  17818357 cacaccaataacaaacttgatgtgtggagcaaggaataatcaagcaaccaaaa-caaagtgtatggaacaattataaacacaagccaaaagtagaaaaca 17818455  T
Q  408 ac-agcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
     | ||  |||| ||||||| ||| |||||||||||||||||||||||    
T  17818456 gcgagagagag-aaaggaaaagagaacacaaaagaatttgttgaccc 17818501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 327 - 452
Target Start/End: Original strand, 18509203 - 18509326
Alignment:
Q  327 atgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaacaacagcaagagaaaaggaag 426  Q
    ||||||||||||||||||| |||  ||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||| ||||    
T  18509203 atgtgtggagcaagggatagtcaaacaaccaaaa-caaagtgtatgaaacaattataaacacaagccaaaagtagaaaacaacagcgagagaaaa-gaag 18509300  T
Q  427 agataacacaaaagaatttgttgacc 452  Q
    ||| ||||||||||||||||||||||    
T  18509301 agagaacacaaaagaatttgttgacc 18509326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 304 - 452
Target Start/End: Original strand, 31465851 - 31465997
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| ||| || ||||||||| ||||| ||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31465851 aaatcacaccaataacaaatttgatgtgtggaacaaggaataattaagcaaccaaaatcaaagtgtatggaacaattataaacacaagccaaaagtagaa 31465950  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgacc 452  Q
    |||| | |  |||||||| ||||||| || |||||||||||||||||||    
T  31465951 aacagc-gagagagaaaa-gaagagagaatacaaaagaatttgttgacc 31465997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 307 - 451
Target Start/End: Original strand, 26098152 - 26098295
Alignment:
Q  307 tcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaac 406  Q
    |||||||||||  |||||| ||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  26098152 tcacaccaatatcaaacttgatgtgtggagcaaggaataatcaagcaaccaaaa-caaagtgtatggaacaattataaacacaagccaaaagtagaaaac 26098250  T
Q  407 aac-agcaagagaaaaggaagagataacacaaaagaatttgttgac 451  Q
    | | ||  |||| ||||||||||| |||| ||||||||||||||||    
T  26098251 agcgagagagag-aaaggaagagagaacataaaagaatttgttgac 26098295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 284 - 409
Target Start/End: Complemental strand, 36209009 - 36208885
Alignment:
Q  284 attgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattata 383  Q
    |||||| |||||||| ||  |||||||| ||||||||||||| |||||| ||||||| |||||||| |||||||||| |||||||||| |||||||||||    
T  36209009 attgttgtgaattcgatgaaaaatcacatcaataataaacttgatgtgtagagcaagtgataatcaagcaaccaaaa-caaagtgtatagaacaattata 36208911  T
Q  384 atcacaagccaaaagtagaaaacaac 409  Q
    ||||||||||||||||||||||||||    
T  36208910 atcacaagccaaaagtagaaaacaac 36208885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 284 - 409
Target Start/End: Original strand, 41585578 - 41585702
Alignment:
Q  284 attgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattata 383  Q
    |||||| |||||||| ||  ||||||||||||||| |||||| |||||||| ||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  41585578 attgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggggcaagagataatcaagcaaccaaaa-caaagtgtatggaacaattata 41585676  T
Q  384 atcacaagccaaaagtagaaaacaac 409  Q
    | ||||||||||||||||||||||||    
T  41585677 aacacaagccaaaagtagaaaacaac 41585702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 292 - 453
Target Start/End: Complemental strand, 21948462 - 21948296
Alignment:
Q  292 gaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaacc-aaaatcaaagtgtatggaacaattataatcacaa 390  Q
    ||||||| || |||| ||||||||||| |||||| ||||||||||||||||||||||| |||||| ||||  |||||||||||||||||||||| |||||    
T  21948462 gaattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaagggataatcaagcaaccaaaaaataaagtgtatggaacaattataaacacaa 21948363  T
Q  391 gccaaaagtagaaaacaac-agcaagag---aaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||||||||||| | | ||  ||||    ||||||||||| |||||||||||||||||||||||    
T  21948362 gccaaaagtagaaaatagcgagagagagggagaaaggaagagagaacacaaaagaatttgttgaccc 21948296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 40221945 - 40221793
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  40221945 aaatcacaccaataacaaacttgatgtgtggagcaaaggatagtcaagcaaccaaaa-caaagtgtatggaacaattataaacacaagccaaaagtagaa 40221847  T
Q  404 aacaac-agcaagaga---aaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||| | ||  |||||   ||||||||||| | ||||||| |||||||||||||    
T  40221846 aacagcgagagagagagagaaaggaagagagagcacaaaataatttgttgaccc 40221793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 302 - 453
Target Start/End: Original strand, 1189468 - 1189616
Alignment:
Q  302 tgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtag 401  Q
    ||||| ||||||||||  |||||| ||||||||||||||| ||||||| || ||||||| |||| |||||||||||||||||| ||||||||||||||||    
T  1189468 tgaaaacacaccaatatcaaacttgatgtgtggagcaaggaataatcaagccaccaaaa-caaaatgtatggaacaattataaacacaagccaaaagtag 1189566  T
Q  402 aaaacaacagcaagaga-aaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||    || ||||| ||||||||||| |||||||||||||||||||||||    
T  1189567 aaaact---gcgagagagaaaggaagagagaacacaaaagaatttgttgaccc 1189616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 286 - 453
Target Start/End: Complemental strand, 2954849 - 2954686
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat-aa 384  Q
    |||| |||||||| || |||| ||||||||||| ||| || |||||||||| ||| ||||||||| ||||||||| |||||||||||||||||||||  |    
T  2954849 tgttctgaattcgatgagaaaacacaccaataacaaatttgatgtgtggagtaagtgataatcagacaaccaaaa-caaagtgtatggaacaattatgta 2954751  T
Q  385 tcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
     ||||||||||||||||||   |||||| |||||||| ||||||| |||||||||||||||||||||||    
T  2954750 acacaagccaaaagtagaa---aacagcgagagaaaa-gaagagagaacacaaaagaatttgttgaccc 2954686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 309 - 453
Target Start/End: Complemental strand, 17073298 - 17073154
Alignment:
Q  309 acaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaacaa 408  Q
    |||||||||||||| || |||||||||||||| ||| |||| ||||| |||| ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  17073298 acaccaataataaatttgatgtgtggagcaagtgatgatcaagcaactaaaa-caaagtgtatggaacaattataaacacaagtcaaaagtagaaaacaa 17073200  T
Q  409 cagcaagag-aaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||| |||| ||||  |||||| ||  |||||||||||||||||||    
T  17073199 cagcgagagaaaaataaagagagaaagcaaaagaatttgttgaccc 17073154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 292 - 451
Target Start/End: Complemental strand, 6756921 - 6756764
Alignment:
Q  292 gaattcgttgtgaaatcacaccaataataaa-cttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaa 390  Q
    ||||||| || |||| ||||||||||| ||| ||| |||||||||||||| ||||||||||||| ||||| ||||||||||| ||||||||||| |||||    
T  6756921 gaattcgatgagaaaacacaccaataacaaaacttgatgtgtggagcaagtgataatcaggcaatcaaaa-caaagtgtatgaaacaattataaacacaa 6756823  T
Q  391 gccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgac 451  Q
    ||||||||||||||||| | |  |||||||| ||||||| ||||||||||| |||||||||    
T  6756822 gccaaaagtagaaaacagc-gagagagaaaa-gaagagagaacacaaaagattttgttgac 6756764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 304 - 452
Target Start/End: Original strand, 10474186 - 10474331
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    |||| ||| ||||||||||||| ||||||||||||||| ||||||| | |||||||| ||||||||||||||||||||||| ||||||| ||||||||||    
T  10474186 aaattacatcaataataaacttgatgtgtggagcaaggaataatcaagtaaccaaaa-caaagtgtatggaacaattataaacacaagcgaaaagtagaa 10474284  T
Q  404 aacaacagcaagaga-aaaggaagagataacacaaaagaatttgttgacc 452  Q
       |  ||| ||||| ||||||||||| ||||||||||||||||||||||    
T  10474285 ---attagcgagagagaaaggaagagagaacacaaaagaatttgttgacc 10474331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 285 - 453
Target Start/End: Original strand, 25921314 - 25921482
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    ||||||||||||||||| ||| |||||||||||| || ||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||    
T  25921314 ttgttttgaattcgttgagaa-tcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaat-aaagtgtatggaacaatta-aa 25921409  T
Q  385 tcacaagccaaaagtagaaaacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    | ||||||||||||||||||||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  25921410 t-acaagccaaaagtagaaaacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 25921482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 307 - 409
Target Start/End: Original strand, 12555779 - 12555880
Alignment:
Q  307 tcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaac 406  Q
    |||||||||||| ||| || ||||||||||||||| ||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  12555779 tcacaccaataacaaatttgatgtgtggagcaaggaataatcaagcaaccaaaat-aaagtgtatgaaacaattataatcacaagccaaaagtagaaaac 12555877  T
Q  407 aac 409  Q
    |||    
T  12555878 aac 12555880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 10528956 - 10529058
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  10528956 aaatcacaccaataacaa-cttgatgtgtgaagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaatta-aat-acaagccaaaagtagaa 10529052  T
Q  404 aacaac 409  Q
    ||||||    
T  10529053 aacaac 10529058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 303 - 453
Target Start/End: Complemental strand, 20043407 - 20043260
Alignment:
Q  303 gaaatcacaccaataataaacttaatgtgtggagcaagggataa-tcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtag 401  Q
    |||| |||| |||||| |||||| || ||||||||||| ||||| ||| ||| |||||| ||||||||||||||||||||||| ||||||||||||||||    
T  20043407 gaaaacacatcaataacaaacttgatttgtggagcaagtgataaatcaagcagccaaaa-caaagtgtatggaacaattataaacacaagccaaaagtag 20043309  T
Q  402 aaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||   |||||| ||||||||| |||||| |||||||||||||||||| ||||    
T  20043308 aa---aacagcgagagaaaagaaagagagaacacaaaagaatttgtttaccc 20043260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 327 - 453
Target Start/End: Complemental strand, 26098124 - 26098001
Alignment:
Q  327 atgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaacaacagcaagaga-aaaggaa 425  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||   || ||| | |||||||    
T  26098124 atgtgtggagcaagggatagtcaagcaaccaaaa-caaagtgtatggaacaattataaacactagccaaaagtagaaaaca---gcgagatagaaaggaa 26098029  T
Q  426 gagataacacaaaagaatttgttgaccc 453  Q
    |||| |||||||||||||||||||||||    
T  26098028 gagagaacacaaaagaatttgttgaccc 26098001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 34476911 - 34477013
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  34476911 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaatcaaagtgtatggaacaatta-aat-acaagccaaaagtagaa 34477007  T
Q  404 aacaac 409  Q
    ||||||    
T  34477008 aacaac 34477013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 34479276 - 34479427
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||  ||||||||||||||||    
T  34479276 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaatcaaagtgtatggaacaatta-aat-gcaagccaaaagtagaa 34479372  T
Q  404 aacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  34479373 aacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 34479427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 21289175 - 21289031
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||  |||||| ||||||||||||||||||| ||| |||||||||| |||||||||||||| ||| |||| ||||||||||||||||||    
T  21289175 aaatcacaccaatatcaaacttgatgtgtggagcaagggatagtcaagcaaccaaaa-caaagtgtatggaagaataataaacacaagccaaaagtagaa 21289077  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||   | |||||| |  |||||| || ||||||||||||||||||||    
T  21289076 aacaa---cgagagaaca-aaagagagaaaacaaaagaatttgttgaccc 21289031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 18597061 - 18596916
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| |||| ||||||||| ||||||||| || ||||||| |||||||||||||||||||||| |||||| |||||||||||    
T  18597061 aaatcacaccaataacaaacttgatgtatggagcaagtgataatcagacatccaaaat-aaagtgtatggaacaattataaacacaagtcaaaagtagaa 18596963  T
Q  404 aacaacagcaagagaaaaggaagagat-aacacaaaagaatttgttgaccc 453  Q
    ||||   || ||||||||| |||||   ||||||||||||| |||||||||    
T  18596962 aaca---gcgagagaaaag-aagagtcgaacacaaaagaatctgttgaccc 18596916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 286 - 409
Target Start/End: Original strand, 3372977 - 3373097
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  ||||||||||||||| || ||| ||||||||||||||||||||| | |||||||||||||||| |||||||||||||| |||    
T  3372977 tgttgtgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagcaaccaaaatcaaagcgtatggaacaatta-aat 3373074  T
Q  386 cacaagccaaaagtagaaaacaac 409  Q
     |||||||||||||||||||||||    
T  3373075 -acaagccaaaagtagaaaacaac 3373097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 292 - 452
Target Start/End: Complemental strand, 25904530 - 25904374
Alignment:
Q  292 gaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaag 391  Q
    ||||||| || |||| ||||||| ||||||| || |||||||| |||||||||| ||| ||||  |||| ||||||||||||||||||||||| |||||     
T  25904530 gaattcgatgagaaaacacacca-taataaatttgatgtgtggtgcaagggatagtcaagcaatgaaaa-caaagtgtatggaacaattataaacacaaa 25904433  T
Q  392 ccaaaagtagaaaacaacagcaagaga-aaaggaagagataacacaaaagaatttgttgacc 452  Q
    ||||||||||||   |||||| ||||| ||||||||||| ||||||||| ||||||||||||    
T  25904432 ccaaaagtagaa---aacagcgagagagaaaggaagagagaacacaaaataatttgttgacc 25904374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 304 - 409
Target Start/End: Complemental strand, 10750120 - 10750018
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||| | |||||||||||||||| |||||||||||||| ||| |||||||||||||||||    
T  10750120 aaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagcaaccaaaatcaaagcgtatggaacaatta-aat-acaagccaaaagtagaa 10750024  T
Q  404 aacaac 409  Q
    ||||||    
T  10750023 aacaac 10750018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 304 - 409
Target Start/End: Complemental strand, 10757596 - 10757494
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||| | |||||||||||||||| |||||||||||||| ||| |||||||||||||||||    
T  10757596 aaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagcaaccaaaatcaaagcgtatggaacaatta-aat-acaagccaaaagtagaa 10757500  T
Q  404 aacaac 409  Q
    ||||||    
T  10757499 aacaac 10757494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 450
Target Start/End: Original strand, 16092045 - 16092205
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| || |||| | ||||||||| |||||| || |||||||||| ||||| ||| |||||||||  |||||| |||||||||||| |||     
T  16092045 tgttgtgaattcgatgagaaaacgcaccaataacaaacttgatatgtggagcaatggatagtcaagcaaccaaa--caaagtatatggaacaattgtaaa 16092142  T
Q  386 cacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttga 450  Q
    | |||||||||||||||||||| | |  |||||||| ||||||| ||||||||||||||||||||    
T  16092143 cgcaagccaaaagtagaaaacagc-gagagagaaaa-gaagagagaacacaaaagaatttgttga 16092205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 286 - 407
Target Start/End: Original strand, 34530559 - 34530679
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  ||||||||||||||| |||||| |||||| ||||||| |||||||| |||||||||| ||||| |||||||||||||||||     
T  34530559 tgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtcgagcaagtgataatcaagcaaccaaaa-caaagcgtatggaacaattataaa 34530657  T
Q  386 cacaagccaaaagtagaaaaca 407  Q
    |||||| |||||||||| ||||    
T  34530658 cacaagtcaaaagtagacaaca 34530679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 286 - 409
Target Start/End: Complemental strand, 18469448 - 18469328
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  |||||| |||||||| |||||| ||||||||||||||||||||||| |||||||||| |||||||||||||  | ||||||     
T  18469448 tgttgtgaattcgatgaaaaatcataccaataacaaacttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatgga--agttataaa 18469352  T
Q  386 cacaagccaaaagtagaaaacaac 409  Q
     |||||||||||||||||||||||    
T  18469351 tacaagccaaaagtagaaaacaac 18469328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 283 - 409
Target Start/End: Complemental strand, 18467126 - 18467003
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  ||||||||| ||||| |||||| ||||||||||||||||||||||| |||| ||||| |||||||||||||  | ||||    
T  18467126 aattgttgtgaattcgatgaaaaatcacactaataacaaacttgatgtgtggagcaagggataatcaagcaatcaaaa-caaagtgtatgga--agttat 18467030  T
Q  383 aatcacaagccaaaagtagaaaacaac 409  Q
    ||  |||||||||||||||||||||||    
T  18467029 aaatacaagccaaaagtagaaaacaac 18467003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 311 - 409
Target Start/End: Complemental strand, 20045395 - 20045298
Alignment:
Q  311 accaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaacaac 409  Q
    |||||||| |||||| ||||||| |||||  |||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  20045395 accaataacaaacttgatgtgtgaagcaaatgataatcaagcaaccaaaa-caaagtgtatggaacaattataaacacaagccaaaagtaaaaaacaac 20045298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 304 - 409
Target Start/End: Complemental strand, 38882508 - 38882407
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  38882508 aaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaagccaaaagtagaa 38882413  T
Q  404 aacaac 409  Q
    ||||||    
T  38882412 aacaac 38882407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 308 - 452
Target Start/End: Original strand, 37705649 - 37705788
Alignment:
Q  308 cacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaaca 407  Q
    ||||||||||| |||||| ||||||||||||||| |||| || |||||||||| |||||| ||||||| ||||| || ||||||||||||||||||   |    
T  37705649 cacaccaataacaaacttgatgtgtggagcaaggaataaccaagcaaccaaaa-caaagtatatggaataattaaaaacacaagccaaaagtagaa---a 37705744  T
Q  408 acagcaagaga-aaaggaagagataacacaaaagaatttgttgacc 452  Q
    ||||| ||||| ||||||||||| ||| |  |||||||||||||||    
T  37705745 acagcgagagagaaaggaagagagaacgc--aagaatttgttgacc 37705788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 286 - 409
Target Start/End: Complemental strand, 4237065 - 4236947
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||||||  ||||||||||||||| || ||| ||||||| |||||| |||||||| |||||||||| |||||||||||||||||||| |||    
T  4237065 tgttgtgaattcgttga-aaatcacaccaataacaa-cttgatgtgtgaagcaagagataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat 4236970  T
Q  386 cacaagccaaaagtagaaaacaac 409  Q
     |||||||||||||||||||||||    
T  4236969 -acaagccaaaagtagaaaacaac 4236947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 306 - 409
Target Start/End: Complemental strand, 25804442 - 25804343
Alignment:
Q  306 atcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaa 405  Q
    ||||||||||||| || ||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||||||    
T  25804442 atcacaccaataacaa-cttgatgtgtggagcaagagataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaagccaaaagtagaaaa 25804347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 307 - 409
Target Start/End: Complemental strand, 2175318 - 2175220
Alignment:
Q  307 tcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaac 406  Q
    |||||||||||| || ||| ||||||||||||||||||||||| |||||||||| ||||||||||| |||||||| ||| ||||||||||||||||||||    
T  2175318 tcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatgaaacaatta-aat-acaagccaaaagtagaaaac 2175223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 291 - 453
Target Start/End: Complemental strand, 27912970 - 27912806
Alignment:
Q  291 tgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaa 390  Q
    |||||||| ||  ||||| ||||||||| |||||| |||||||||| |||||||||||| |||||||||| |||||||||||||  | ||||||  ||||    
T  27912970 tgaattcgatgaaaaatcccaccaataacaaacttgatgtgtggagtaagggataatcaagcaaccaaaa-caaagtgtatgga--agttataaatacaa 27912874  T
Q  391 gccaaaagtagaaaacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    || |||||||||||||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  27912873 gctaaaagtagaaaacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 27912806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 21684311 - 21684412
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| |||| ||||| |||||||||||||||||||| ||| | |||||||||||||||    
T  21684311 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaatcaaaa-caaagtgtatggaacaatta-aat-aaaagccaaaagtagaa 21684406  T
Q  404 aacaac 409  Q
    ||||||    
T  21684407 aacaac 21684412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 283 - 409
Target Start/End: Complemental strand, 27910875 - 27910752
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  ||||||||||||||| ||| || |||||||||||||||||||||||  |||||||||| ||||||||||||  | ||||    
T  27910875 aattgttgtgaattcgatgaaaaatcacaccaataacaaatttgatgtgtggagcaagggataatcaatcaaccaaaat-aaagtgtatgga--agttat 27910779  T
Q  383 aatcacaagccaaaagtagaaaacaac 409  Q
    ||  |||||| ||||||| ||||||||    
T  27910778 aaatacaagctaaaagtataaaacaac 27910752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 304 - 409
Target Start/End: Complemental strand, 10587235 - 10587134
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||||| |||||||||||||  | ||||||  ||||| |||||||||||    
T  10587235 aaatcacaccaataacaaacttgatgtgtggagcaa-ggataatcaagcaaccaaaa-caaagtgtatgga--agttataaatacaagtcaaaagtagaa 10587140  T
Q  404 aacaac 409  Q
    ||||||    
T  10587139 aacaac 10587134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 38959990 - 38960091
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| |||||||||||  | | ||||||  |||||||||||||||||    
T  38959990 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatg--aaagttataaatacaagccaaaagtagaa 38960085  T
Q  404 aacaac 409  Q
    ||||||    
T  38960086 aacaac 38960091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 696291 - 696148
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaa-ccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtaga 402  Q
    |||||| |||||||| | |||| |||||||||||||| |||||||| | || ||||||| ||||||||||||||| |||||| |||||  ||||||||||    
T  696291 aaatcataccaataacagacttgatgtgtggagcaagagataatcaagaaaaccaaaat-aaagtgtatggaacagttataaacacaa-acaaaagtaga 696194  T
Q  403 aaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||||||  ||   |||| |||||| ||||||||| |||||||||||||    
T  696193 aaacaacag--ag---aaagaaagagagaacacaaaataatttgttgaccc 696148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 283 - 405
Target Start/End: Original strand, 15356687 - 15356806
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| ||||||||  |  ||||||||||||||| || ||| ||||||||||||||||||||| | |||||||||||||||| |||||||| || ||     
T  15356687 aattgttgtgaattcgacgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagcaaccaaaatcaaagcgtatggaataa-taa 15356784  T
Q  383 aatcacaagccaaaagtagaaaa 405  Q
    ||| || ||||||||||||||||    
T  15356785 aat-acgagccaaaagtagaaaa 15356806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 283 - 405
Target Start/End: Complemental strand, 23665487 - 23665368
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| ||||||||  |  ||||||||||||||| || ||| ||||||||||||||||||||| | |||||||||||||||| |||||||| || ||     
T  23665487 aattgttgtgaattcgacgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagcaaccaaaatcaaagcgtatggaataa-taa 23665390  T
Q  383 aatcacaagccaaaagtagaaaa 405  Q
    ||| || ||||||||||||||||    
T  23665389 aat-acgagccaaaagtagaaaa 23665368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 283 - 405
Target Start/End: Original strand, 23793100 - 23793219
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| ||||||||  |  ||||||||||||||| || ||| ||||||||||||||||||||| | |||||||||||||||| |||||||| || ||     
T  23793100 aattgttgtgaattcgacgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagcaaccaaaatcaaagcgtatggaataa-taa 23793197  T
Q  383 aatcacaagccaaaagtagaaaa 405  Q
    ||| || ||||||||||||||||    
T  23793198 aat-acgagccaaaagtagaaaa 23793219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 403
Target Start/End: Original strand, 31179213 - 31179326
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  ||||||||||||||| || ||| |||| |||||||||||||||| | |||||||||| |||||||||||||| |||  |||     
T  31179213 tgttgtgaattcgatgaaaaatcacaccaataacaa-cttgatgtatggagcaagggataattaagcaaccaaaa-caaagtgtatggaataat--taaa 31179308  T
Q  386 cacaagccaaaagtagaa 403  Q
    ||||||||||||||||||    
T  31179309 cacaagccaaaagtagaa 31179326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 409
Target Start/End: Complemental strand, 39798450 - 39798349
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| ||  || ||||||||||||||||||||||| |||||||||| |||||||||||  | | ||||||  |||||||||||||||||    
T  39798450 aaatcacaccaataacaat-ttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatg--aaagttataaatacaagccaaaagtagaa 39798355  T
Q  404 aacaac 409  Q
    ||||||    
T  39798354 aacaac 39798349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 407
Target Start/End: Complemental strand, 4410441 - 4410343
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| ||||||||||  || |||||||||  | ||||||  |||||||||||||||||    
T  4410441 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa--aaggtgtatgga--agttataaatacaagccaaaagtagaa 4410347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 405
Target Start/End: Original strand, 15354432 - 15354530
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||| | |||||||||||||||| |||||||| || || ||| || ||||||||||||||    
T  15354432 aaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagcaaccaaaatcaaagcgtatggaataa-taaaat-acgagccaaaagtagaa 15354528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 405
Target Start/End: Original strand, 23741715 - 23741813
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||| | |||||||||||||||| |||||||| || || ||| || ||||||||||||||    
T  23741715 aaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagcaaccaaaatcaaagcgtatggaataa-taaaat-acgagccaaaagtagaa 23741811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 409
Target Start/End: Complemental strand, 31543153 - 31543053
Alignment:
Q  305 aatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaa 404  Q
    |||||||||||||| || ||| |||||||||||||||| |||||| |||||||||| ||||| |||||  | | ||||||  ||||||||||||||||||    
T  31543153 aatcacaccaataacaa-cttgatgtgtggagcaagggttaatcaagcaaccaaaa-caaagcgtatg--aaagttataaatacaagccaaaagtagaaa 31543058  T
Q  405 acaac 409  Q
    |||||    
T  31543057 acaac 31543053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 6661054 - 6661155
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||| | | | || ||||||||||||||  ||||||| ||||||||||| ||||||||||||  | |||||| |||||| |||||||||||    
T  6661054 aaatcacaccaattaaatatttgatgtgtggagcaagtaataatcaagcaaccaaaat-aaagtgtatgga--agttataaacacaag-caaaagtagaa 6661149  T
Q  404 aacaac 409  Q
    ||||||    
T  6661150 aacaac 6661155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 352 - 407
Target Start/End: Original strand, 39397916 - 39397970
Alignment:
Q  352 caaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaaca 407  Q
    ||||||||| ||||||||||| ||||||||||| | ||||||||||||||||||||    
T  39397916 caaccaaaa-caaagtgtatgaaacaattataaactcaagccaaaagtagaaaaca 39397970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 339
Target Start/End: Complemental strand, 20437249 - 20437195
Alignment:
Q  286 tgttttgaattcgttgtgaaa-tcacaccaataataaacttaatgtgtggagcaa 339  Q
    |||| |||||||||||||||| ||||||||| ||||||||| |||||| ||||||    
T  20437249 tgttgtgaattcgttgtgaaaatcacaccaacaataaacttgatgtgttgagcaa 20437195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 339
Target Start/End: Complemental strand, 10627698 - 10627641
Alignment:
Q  283 aattgttttgaattcgttgtgaaatc-acaccaataataaacttaatgtgtggagcaa 339  Q
    ||||||| ||||||| |||||||| | ||||||||||||||||| ||| |||||||||    
T  10627698 aattgttgtgaattcattgtgaaaaccacaccaataataaacttgatgcgtggagcaa 10627641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 305 - 409
Target Start/End: Complemental strand, 31545502 - 31545402
Alignment:
Q  305 aatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaa 404  Q
    |||||||||||||| || ||| |||||||||| ||||| |||||| ||||  ||||| |||| ||||| ||   ||||||  ||||||||||||||||||    
T  31545502 aatcacaccaataacaa-cttgatgtgtggagtaagggttaatcaagcaattaaaat-aaagcgtatgaaag--ttataaatacaagccaaaagtagaaa 31545407  T
Q  405 acaac 409  Q
    |||||    
T  31545406 acaac 31545402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 2e-56; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 282 - 453
Target Start/End: Original strand, 13099313 - 13099483
Alignment:
Q  282 taattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaatta 381  Q
    |||||||| |||||||| ||  ||||||||||||||| |||||| ||||||||||||||||||  |||  ||||||||| ||||||||||||||||||||    
T  13099313 taattgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggatcgtcaaacaaccaaaa-caaagtgtatggaacaatta 13099411  T
Q  382 taatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  13099412 taaacacaagccaaaagtagaaaacaacagcgagagaaaaggaagagagaacacaaaagaatttgttgaccc 13099483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 303 - 453
Target Start/End: Complemental strand, 9679487 - 9679339
Alignment:
Q  303 gaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtaga 402  Q
    |||| ||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  9679487 gaaaacacaccaataacaaacttgatgtgtggagcaagtgataatcaggcaaccaaaatcaaagtgtatggaacaattataaacacaagtcaaaagtaga 9679388  T
Q  403 aaacaacagcaagaga-aaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |   |||||| ||||| |||||||||||||||||||||||||||||||||||    
T  9679387 a---aacagcgagagagaaaggaagagataacacaaaagaatttgttgaccc 9679339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 311 - 453
Target Start/End: Complemental strand, 21990570 - 21990430
Alignment:
Q  311 accaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaacaaca 410  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |   ||||    
T  21990570 accaataataaacttgatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataaacacaagccaaaagtagca---aaca 21990474  T
Q  411 gcaagaga-aaaggaagagataacacaaaagaatttgttgaccc 453  Q
    || ||||| ||||||||||| |||||||||||||||||||||||    
T  21990473 gcgagagagaaaggaagagagaacacaaaagaatttgttgaccc 21990430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 11355686 - 11355538
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||||||| || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  11355686 aaatcacaccaataataaatttgatgtgtggagcaaggaataatcaggcaaccaaaaacaaagtgtatggaacaattataaacacaagccaaaagtagaa 11355587  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||||   ||||| ||| |||||| |||| ||||||||||||||||||    
T  11355586 aacaaca-agagagagaagtaagagagaacataaaagaatttgttgaccc 11355538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 289 - 453
Target Start/End: Original strand, 22251433 - 22251594
Alignment:
Q  289 tttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcac 388  Q
    |||||||| ||||||||| ||||||||||| |||||| |||||| ||||||||||||||||  ||||||||| ||||||||||| ||||||||||| |||    
T  22251433 tttgaatttgttgtgaaaacacaccaataacaaacttgatgtgttgagcaagggataatcaaacaaccaaaa-caaagtgtatgaaacaattataaacac 22251531  T
Q  389 aagccaaaagtagaaaacaacagcaagaga-aaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||||||||||||   |||||||||||| ||||||||| | |||||||||||||||||||||||    
T  22251532 aagccaaaagtagaa---aacagcaagagagaaaggaagatagaacacaaaagaatttgttgaccc 22251594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 303 - 453
Target Start/End: Complemental strand, 26804938 - 26804790
Alignment:
Q  303 gaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtaga 402  Q
    |||||||||||||||| ||| || ||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||||| |||||| ||||||||||    
T  26804938 gaaatcacaccaataacaaatttgatgtgtggagcaaaggatagtcaagcaaccaaaa-caaagtgtatggaacaattataaacacaagtcaaaagtaga 26804840  T
Q  403 aaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||||| | |||||||| ||||||| |||||||||||||||||||||||    
T  26804839 aaacaacatcgagagaaaa-gaagagagaacacaaaagaatttgttgaccc 26804790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 292 - 453
Target Start/End: Original strand, 27306082 - 27306239
Alignment:
Q  292 gaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaag 391  Q
    ||||||| || || ||||||||||||| |||||| ||||||||| ||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||    
T  27306082 gaattcgatgagagatcacaccaataacaaacttgatgtgtggaacaagggatagtcaagcaaccaaaa-caaagtgtatggaacaattataatcacaag 27306180  T
Q  392 ccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||| ||||||||||||| |||||||| ||||||| |||||  ||||||||||||||||    
T  27306181 ccaaaagaagaaaacaacagcgagagaaaa-gaagagagaacac--aagaatttgttgaccc 27306239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 292 - 453
Target Start/End: Original strand, 42330852 - 42331006
Alignment:
Q  292 gaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaag 391  Q
    ||||||| || |||||||| |||||||||||||| ||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||| ||||||    
T  42330852 gaattcgatgagaaatcacgccaataataaacttgatgtgtggagcaatggataatcaagcaaccaaaa-caaagtgtatggaacaattataaacacaag 42330950  T
Q  392 ccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||||||||   |||||| ||||   || |||||| |||||||||||||||||||||||    
T  42330951 ccaaaagtagaa---aacagcgagag---agaaagagagaacacaaaagaatttgttgaccc 42331006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 285 - 453
Target Start/End: Complemental strand, 444045 - 443876
Alignment:
Q  285 ttgttttgaattcgttgtgaaa--tcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||| |||||||| || ||||  |||||||||||| |||||| ||||||||||||||| ||| ||| |||||||||| |||||||||| ||||||||||    
T  444045 ttgttgtgaattcgatgagaaaactcacaccaataacaaacttgatgtgtggagcaaggaatagtcaagcaaccaaaa-caaagtgtattgaacaattat 443947  T
Q  383 aatcacaagccaaaagtagaaaacaac-agcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||||||||||||||||||||| | ||  |||| ||||||||||| |||||||||||||||||||||||    
T  443946 aatcacaagccaaaagtagaaaacagcgagagagag-aaaggaagagagaacacaaaagaatttgttgaccc 443876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 31434911 - 31435055
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||||||||| ||||||| |||| |||||| |||||||| ||||||||||||| ||||||||||||||||||    
T  31434911 aaatcacaccaataacaaacttgatgtgtggagcaaggaataatcaagcaatcaaaat-aaagtgtaaggaacaattataaacacaagccaaaagtagaa 31435009  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||   | |||||||| ||||||| |||||||||||||||||||||||    
T  31435010 aacaa---cgagagaaaa-gaagagagaacacaaaagaatttgttgaccc 31435055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 283 - 453
Target Start/End: Complemental strand, 44725025 - 44724859
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaaca-atta 381  Q
    |||||||  ||||||| || |||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||||||| |||||||||||||||| ||||    
T  44725025 aattgttgcgaattcgatgggaaaacacaccaataacaaacttgatgtgtggagcaagggatagtcaagcaaccaaaa-caaagtgtatggaacatatta 44724927  T
Q  382 taatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||| ||||||||||||||||||||||||    ||||||| | |||||| |||||||||||||||||||||||    
T  44724926 taaacacaagccaaaagtagaaaacaacg---agagaaatg-aagagagaacacaaaagaatttgttgaccc 44724859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 315 - 453
Target Start/End: Original strand, 21592018 - 21592152
Alignment:
Q  315 ataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaacaacagcaa 414  Q
    |||| |||||| |||||||||||||| ||||||||| |||||||||  |||||||||||||||||||||| |||||||||||||||||||||| | |  |    
T  21592018 ataacaaacttgatgtgtggagcaagtgataatcagacaaccaaaa--aaagtgtatggaacaattataaacacaagccaaaagtagaaaacagc-gaga 21592114  T
Q  415 gagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||| ||||||| |||||||||||||||||||||||    
T  21592115 gagaaaa-gaagagagaacacaaaagaatttgttgaccc 21592152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 303 - 452
Target Start/End: Complemental strand, 9681248 - 9681101
Alignment:
Q  303 gaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtaga 402  Q
    |||| ||||||||||| |||||| ||||||||| |||| |||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9681248 gaaaacacaccaataacaaacttgatgtgtggaacaagtgataattagacaaccaaaatcaaagtgtatggaacaattataaacacaagccaaaagtaga 9681149  T
Q  403 aaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgacc 452  Q
    ||| | | |  |||| ||||||||||| ||||||||| ||||| ||||||    
T  9681148 aaagatc-gagagag-aaaggaagagagaacacaaaaaaatttattgacc 9681101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 20626463 - 20626318
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || || | ||||||||||||| |||||||| ||||||||||| |||||||||||||   ||||||  | |||||||||||||||    
T  20626463 aaatcacaccaataacaacctga-tgtgtggagcaagagataatcaagcaaccaaaat-aaagtgtatggaag--ttataaatataagccaaaagtagaa 20626368  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||||| |||||||| || |||| |||||||||||||||||||||||    
T  20626367 aacaacagcgagagaaaaagatgagagaacacaaaagaatttgttgaccc 20626318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 20630354 - 20630209
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || || | ||||||||||||| |||||||| ||||||||||| |||||||||||||   ||||||  | |||||||||||||||    
T  20630354 aaatcacaccaataacaacctga-tgtgtggagcaagagataatcaagcaaccaaaat-aaagtgtatggaag--ttataaatataagccaaaagtagaa 20630259  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||||| |||||||| || |||| |||||||||||||||||||||||    
T  20630258 aacaacagcgagagaaaaagatgagagaacacaaaagaatttgttgaccc 20630209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 20642773 - 20642628
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || || | ||||||||||||| |||||||| ||||||||||| |||||||||||||   ||||||  | |||||||||||||||    
T  20642773 aaatcacaccaataacaacctga-tgtgtggagcaagagataatcaagcaaccaaaat-aaagtgtatggaag--ttataaatataagccaaaagtagaa 20642678  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||||| |||||||| || |||| |||||||||||||||||||||||    
T  20642677 aacaacagcgagagaaaaagatgagagaacacaaaagaatttgttgaccc 20642628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 307 - 409
Target Start/End: Original strand, 37411988 - 37412089
Alignment:
Q  307 tcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaac 406  Q
    |||||||||||| |||||| ||||||||| ||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  37411988 tcacaccaataacaaacttgatgtgtggaacaaggaataatcaagcaaccaaaa-caaagtgtatggaacaattataatcacaagccaaaactagaaaac 37412086  T
Q  407 aac 409  Q
    |||    
T  37412087 aac 37412089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 283 - 453
Target Start/End: Complemental strand, 38394437 - 38394266
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||     
T  38394437 aattgttgtgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatggaacaatta- 38394341  T
Q  383 aatcacaagccaaaagtagaaaacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    ||| ||||||||||||||||||||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  38394340 aat-acaagccaaaagtagaaaacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 38394266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 283 - 407
Target Start/End: Complemental strand, 21678509 - 21678386
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  |||||||||| |||| |||||| || |||||||||||| ||||||| |||||||||| ||||||||| |||||||||||    
T  21678509 aattgttgtgaattcgatgaaaaatcacaccgataacaaacttgatttgtggagcaaggaataatcaagcaaccaaaa-caaagtgtaaggaacaattat 21678411  T
Q  383 aatcacaagccaaaagtagaaaaca 407  Q
    || ||||||||||||||||||||||    
T  21678410 aaacacaagccaaaagtagaaaaca 21678386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 4295799 - 4295943
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||||||||| || |||| |||||||||| |||||||||| ||||||| |||| ||||||||||||||||||    
T  4295799 aaatcacaccaataacaaacttgatgtgtggagcaaggaatcatcaagcaaccaaaa-caaagtgtatagaacaataataaacacaagccaaaagtagaa 4295897  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
       ||  || |||||||| ||||||| |||||||||||||||||| ||||    
T  4295898 ---aatggcgagagaaaa-gaagagagaacacaaaagaatttgttcaccc 4295943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 285 - 453
Target Start/End: Complemental strand, 18345990 - 18345821
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    ||||| |||||||||||||||| |||||||| || || ||| ||||||||||||||||||| ||| |||||||||| |||||||||||||||||||| ||    
T  18345990 ttgttgtgaattcgttgtgaaaacacaccaacaacaa-cttgatgtgtggagcaagggatagtcaagcaaccaaaa-caaagtgtatggaacaatta-aa 18345894  T
Q  385 tcacaagccaaaagtagaaaacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    | ||||||||||||||||||||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  18345893 t-acaagccaaaagtagaaaacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 18345821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 308 - 453
Target Start/End: Complemental strand, 21680450 - 21680310
Alignment:
Q  308 cacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaaca 407  Q
    ||||||||||| || ||| ||||||| ||||||| ||||||| ||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  21680450 cacaccaataacaagcttgatgtgtgaagcaaggaataatcatgcaacaaaaa-caaagtgtatggaacaattataaacacaagccaaaagtagaaaaca 21680352  T
Q  408 acagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |   | |||||||| ||||||| |||| ||||| ||||||||||||    
T  21680351 a---cgagagaaaa-gaagagagaacaaaaaagtatttgttgaccc 21680310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 308 - 453
Target Start/End: Complemental strand, 42223578 - 42223438
Alignment:
Q  308 cacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaaca 407  Q
    ||||||||||| |||||| |||||||||| |||||||||||| ||||||||||| |||||||||  ||||||||||| |||||| |||||||||||||||    
T  42223578 cacaccaataacaaacttgatgtgtggagtaagggataatcaagcaaccaaaat-aaagtgtataaaacaattataaacacaaggcaaaagtagaaaaca 42223480  T
Q  408 acagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |     |||||||| ||||||| || ||||||||||||||||||||    
T  42223479 a---tgagagaaaa-gaagagagaaaacaaaagaatttgttgaccc 42223438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 311 - 453
Target Start/End: Original strand, 39145856 - 39145995
Alignment:
Q  311 accaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaacaaca 410  Q
    |||||||| |||||| |||||||||| ||| |||||||| |||||||||| |||| |||||  ||||||||||| ||||| ||||||||||||||||||     
T  39145856 accaataacaaacttgatgtgtggagtaagtgataatcaagcaaccaaaa-caaattgtattaaacaattataaacacaaaccaaaagtagaaaacaac- 39145953  T
Q  411 gcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |  ||||||| |||||||| |||||||||||||||||||||||    
T  39145954 gagagagaaa-ggaagagagaacacaaaagaatttgttgaccc 39145995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 292 - 453
Target Start/End: Complemental strand, 1850423 - 1850261
Alignment:
Q  292 gaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaag 391  Q
    ||||||| | ||||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| ||||||||||| |||||||| ||| |||||    
T  1850423 gaattcgatttgaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatgaaacaatta-aat-acaag 1850328  T
Q  392 ccaaaagtagaaaacaacag-caagagaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    ||||||||||||||||||||  || ||||   || |||||| | |||||||||||||||||||||||    
T  1850327 ccaaaagtagaaaacaacagtgaaaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 1850261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 283 - 409
Target Start/End: Complemental strand, 20297813 - 20297691
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  ||||||||||||||| || ||| |||||||||||||| |||||||| |||||||||| ||||||||||||||||||||     
T  20297813 aattgttgtgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagcaaccaaaa-caaagtgtatggaacaatta- 20297717  T
Q  383 aatcacaagccaaaagtagaaaacaac 409  Q
    ||| |||||||||||||||||||||||    
T  20297716 aat-acaagccaaaagtagaaaacaac 20297691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 7471839 - 7471940
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  7471839 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaagccaaaagtagaa 7471934  T
Q  404 aacaac 409  Q
    ||||||    
T  7471935 aacaac 7471940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 453
Target Start/End: Complemental strand, 28486016 - 28485845
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  ||||||||||||||| || ||| || |||||||||||||||||||| |||||||||| |||| |||||||||||||||     
T  28486016 aattgttgtgaattcgatgaaaaatcacaccaataacaa-cttgatatgtggagcaagggataatcaagcaaccaaaa-caaaatgtatggaacaatta- 28485920  T
Q  383 aatcacaagccaaaagtagaaaacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    ||| ||||||||||||||||||||||| |  || ||||   || |||||| |||||||||||||||||||||||||    
T  28485919 aat-acaagccaaaagtagaaaacaacggatagaagaacacaaagaagagaataacacaaaagaatttgttgaccc 28485845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 40836602 - 40836752
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||||||||||||||||||  ||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  40836602 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaaacaaccaaaa-caaagtgtatggaacaatta-aat-acaagccaaaagtagaa 40836697  T
Q  404 aacaacagcaag----agaaaaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || ||    | |||| |||||| | |||||||||||||||||||||||    
T  40836698 aacaacggcgagaagaacaaaaagaagagaagaacacaaaagaatttgttgaccc 40836752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 292 - 453
Target Start/End: Complemental strand, 45006 - 44844
Alignment:
Q  292 gaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaag 391  Q
    ||||||| || |||||||||||||||| || ||| ||||||||||||| ||||||||| |||||||||| |||||||||||||||||||| ||| |||||    
T  45006 gaattcgatgagaaatcacaccaataacaa-cttgatgtgtggagcaatggataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaag 44911  T
Q  392 ccaaaagtagaaaacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    | |||||||||||||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  44910 caaaaagtagaaaacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 44844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 303 - 408
Target Start/End: Complemental strand, 36060 - 35959
Alignment:
Q  303 gaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtaga 402  Q
    |||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| |||| |||||||||||    
T  36060 gaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaaaccaaaagtaga 35965  T
Q  403 aaacaa 408  Q
    ||||||    
T  35964 aaacaa 35959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 291 - 453
Target Start/End: Complemental strand, 3036167 - 3036004
Alignment:
Q  291 tgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaa 390  Q
    |||||||| || |||||||||||||||| ||  || |||| ||||||||| |||||||| |||||||||| |||||||||||||||||||| ||| ||||    
T  3036167 tgaattcgatgagaaatcacaccaataacaat-ttgatgtttggagcaagagataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaa 3036072  T
Q  391 gccaaaagtagaaaacaacagcaag-agaa---aaggaagaga-taacacaaaagaatttgttgaccc 453  Q
    ||||||||||||||||||| || || ||||   || |||||||  |||||||||||||||||||||||    
T  3036071 gccaaaagtagaaaacaacggcgagaagaacacaaagaagagaggaacacaaaagaatttgttgaccc 3036004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 304 - 409
Target Start/End: Complemental strand, 11759557 - 11759456
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  11759557 aaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaagccaaaagtagaa 11759462  T
Q  404 aacaac 409  Q
    ||||||    
T  11759461 aacaac 11759456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 304 - 409
Target Start/End: Complemental strand, 20299890 - 20299789
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  20299890 aaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaagccaaaagtagaa 20299795  T
Q  404 aacaac 409  Q
    ||||||    
T  20299794 aacaac 20299789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 285 - 435
Target Start/End: Complemental strand, 24465976 - 24465832
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    ||||| |||||||| ||  ||||||||||||||||||| || ||||||||| |||| |||| ||| |||||||||| |||||||||||||  | ||||||    
T  24465976 ttgttgtgaattcgatgaaaaatcacaccaataataaatttgatgtgtggaacaagtgatattcaagcaaccaaaa-caaagtgtatgga--agttataa 24465880  T
Q  385 tcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacac 435  Q
    |||||| ||||||||||||   |||||| ||||||||| |||||| |||||    
T  24465879 tcacaaaccaaaagtagaa---aacagcgagagaaaagaaagagagaacac 24465832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 304 - 409
Target Start/End: Complemental strand, 28487983 - 28487882
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| ||||| |||||||||||    
T  28487983 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaagtcaaaagtagaa 28487888  T
Q  404 aacaac 409  Q
    ||||||    
T  28487887 aacaac 28487882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 451
Target Start/End: Complemental strand, 24749038 - 24748877
Alignment:
Q  283 aattgttttgaattcgttgtgaaatc-acaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaatta 381  Q
    ||||||| |||||||| || |||| | |||||||||| |||||| |||||||||||||||||||||||  ||||||||| |||||||||||||  | |||    
T  24749038 aattgttgtgaattcgatgagaaaaccacaccaataacaaacttgatgtgtggagcaagggataatcaaacaaccaaaa-caaagtgtatgga--agtta 24748942  T
Q  382 taatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgac 451  Q
    |||||||||  ||||||||||||||||   | |||| |||  |||||| |||||||||||||||||||||    
T  24748941 taatcacaa-acaaaagtagaaaacaa---cgagag-aaataaagagagaacacaaaagaatttgttgac 24748877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 48458083 - 48457933
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||| ||| ||||| |||||||||||    
T  48458083 aaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaagtcaaaagtagaa 48457988  T
Q  404 aacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  48457987 aacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 48457933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 286 - 409
Target Start/End: Complemental strand, 25542976 - 25542857
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  ||||||||||||||| || ||| ||||||||||||||||||||||| |||| ||||| |||| ||||||||||||||| |||    
T  25542976 tgttgtgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaatcaaaa-caaaatgtatggaacaatta-aat 25542880  T
Q  386 cacaagccaaaagtagaaaacaac 409  Q
     |||||||||||||||||||||||    
T  25542879 -acaagccaaaagtagaaaacaac 25542857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 7094318 - 7094420
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||||||||| ||| ||| ||||||||||| ||||||| ||||||||||| ||| ||||| |||||||||||    
T  7094318 aaatcacaccaataacaaacttgatgtgtggagcaaggcatagtcaagcaaccaaaat-aaagtgtgtggaacaatta-aat-acaagtcaaaagtagaa 7094414  T
Q  404 aacaac 409  Q
    ||||||    
T  7094415 aacaac 7094420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 304 - 408
Target Start/End: Original strand, 7092071 - 7092172
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||||||||||||| ||| ||||||||||| ||||||| ||||||||||| ||| | ||| |||||||||||    
T  7092071 aaatcacaccaataacaaacttgatgtgtggagcaagggatagtcaagcaaccaaaat-aaagtgtgtggaacaatta-aat-ataagtcaaaagtagaa 7092167  T
Q  404 aacaa 408  Q
    |||||    
T  7092168 aacaa 7092172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 286 - 409
Target Start/End: Complemental strand, 1606827 - 1606708
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  ||||||||||||||| || ||| ||||||||||||||||||||| | |||||||||| ||||| |||||||| ||||| |||    
T  1606827 tgttgtgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagcaaccaaaa-caaagcgtatggaataatta-aat 1606731  T
Q  386 cacaagccaaaagtagaaaacaac 409  Q
     |||||||||||||||||||||||    
T  1606730 -acaagccaaaagtagaaaacaac 1606708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 285 - 407
Target Start/End: Original strand, 27832487 - 27832606
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    ||||| |||||||| ||  |||||| |||||||| ||||||||||||||||||| |  ||||||| | |||||||| |||||||||||||  | ||||||    
T  27832487 ttgttgtgaattcgatgaaaaatcataccaataacaaacttaatgtgtggagcaggaaataatcaagtaaccaaaa-caaagtgtatgga--agttataa 27832583  T
Q  385 tcacaagccaaaagtagaaaaca 407  Q
    |||||| ||||||||||||||||    
T  27832584 tcacaaaccaaaagtagaaaaca 27832606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 9027052 - 9027153
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| |||||||||||  | | ||||||  |||||||||||||||||    
T  9027052 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatg--aaagttataaatacaagccaaaagtagaa 9027147  T
Q  404 aacaac 409  Q
    ||||||    
T  9027148 aacaac 9027153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 292 - 405
Target Start/End: Complemental strand, 3879021 - 3878911
Alignment:
Q  292 gaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaag 391  Q
    ||||||| || ||||||||| ||||||||| ||| |||||||||||||| |||||||| ||||||||||  ||| ||||||||||||||| ||| ||||     
T  3879021 gaattcgatgagaaatcacatcaataataa-cttgatgtgtggagcaagagataatcaagcaaccaaaacaaaaatgtatggaacaatta-aat-acaaa 3878925  T
Q  392 ccaaaagtagaaaa 405  Q
    ||||||||||||||    
T  3878924 ccaaaagtagaaaa 3878911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 405
Target Start/End: Complemental strand, 38397069 - 38396972
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||| | |||||||||| |||||||||| ||||||||| ||| |||||||||||||||||    
T  38397069 aaatcacaccaataacaa-cttgatgtgtggagcaagggataataaagcaaccaaaa-caaagtgtatagaacaatta-aat-acaagccaaaagtagaa 38396974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 453
Target Start/End: Complemental strand, 22394137 - 22394003
Alignment:
Q  310 caccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaacaac 409  Q
    |||||||||||||||| |||||  ||||||| |||| |||  ||||||||| ||||||||||||||   |||||||||||| ||||||||||||||||||    
T  22394137 caccaataataaacttgatgtg--gagcaagtgatagtcaaacaaccaaaa-caaagtgtatggaag--ttataatcacaaaccaaaagtagaaaacaac 22394043  T
Q  410 agcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
        ||||||| | |||||| |||||||||||||||||| ||||    
T  22394042 g---agagaaa-gaaagagagaacacaaaagaatttgtttaccc 22394003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 283 - 405
Target Start/End: Complemental strand, 40550280 - 40550161
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| ||||||||  |  ||||||||||||||| || ||| ||||||||||||||||||||| | |||||||||||||||| |||||||| || ||     
T  40550280 aattgttgtgaattcgacgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagcaaccaaaatcaaagcgtatggaataa-taa 40550183  T
Q  383 aatcacaagccaaaagtagaaaa 405  Q
    ||| || ||||||||||||||||    
T  40550182 aat-acgagccaaaagtagaaaa 40550161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 7469882 - 7469982
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| ||  || |||||||||||| |||||||||| ||||| |||| |||||||||||||||||||| ||| |||||||||||||||||    
T  7469882 aaatcacaccaataacaat-ttgatgtgtggagca-gggataatcaagcaactaaaa-caaagtgtatggaacaatta-aat-acaagccaaaagtagaa 7469976  T
Q  404 aacaac 409  Q
    ||||||    
T  7469977 aacaac 7469982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 405
Target Start/End: Original strand, 43253375 - 43253472
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| ||  || |||||||||||||| |||||||| |||||||||| |||||||||||||||||||| ||| ||||| |||||||||||    
T  43253375 aaatcacaccaataacaat-ttgatgtgtggagcaagagataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaagtcaaaagtagaa 43253470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 321 - 405
Target Start/End: Complemental strand, 40946744 - 40946663
Alignment:
Q  321 aacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaa 405  Q
    ||||| ||||||||||||||||||||||| |||||||||| ||||||||||| |||||||| ||| ||||||||||| |||||||    
T  40946744 aacttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatgaaacaatta-aat-acaagccaaaaatagaaaa 40946663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 409
Target Start/End: Complemental strand, 2935699 - 2935597
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagcc-aaaagtaga 402  Q
    ||||||||||||||| || ||| ||||||| ||||||||||||| | |||||||||| ||||| |||||||||||||| ||| ||||||| |||||||||    
T  2935699 aaatcacaccaataacaa-cttgatgtgtgaagcaagggataattaagcaaccaaaa-caaagcgtatggaacaatta-aat-acaagccaaaaagtaga 2935604  T
Q  403 aaacaac 409  Q
    |||||||    
T  2935603 aaacaac 2935597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 7351510 - 7351611
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||||| |||||||||| | |||||||||| ||||||||||| ||   ||||||  |||||||||||||||||    
T  7351510 aaatcacaccaataacaa-cttgatgtgtggagtaagggataattaagcaaccaaaa-caaagtgtatgaaag--ttataaatacaagccaaaagtagaa 7351605  T
Q  404 aacaac 409  Q
    ||||||    
T  7351606 aacaac 7351611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 409
Target Start/End: Complemental strand, 26295867 - 26295766
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| | |||| |||| ||||||| | |||||||| |||| ||||| ||||||||||| ||  ||||||| ||||||||||||||||||    
T  26295867 aaatcacaccaataa-atacttgatgtatggagcacgtgataatcaagcaatcaaaa-caaagtgtatgaaa--attataaacacaagccaaaagtagaa 26295772  T
Q  404 aacaac 409  Q
    ||||||    
T  26295771 aacaac 26295766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 405
Target Start/End: Complemental strand, 22137509 - 22137411
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||||||||| |||||| | |||||||||||||||| |||||||| || || ||| || ||||||||||||||    
T  22137509 aaatcacaccaataacaa-cttgatgtgtggagcaagagataattaagcaaccaaaatcaaagcgtatggaataa-taaaat-acgagccaaaagtagaa 22137413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 405
Target Start/End: Complemental strand, 40552536 - 40552438
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||||||||| |||||| | |||||||||||||||| |||||||| || || ||| || ||||||||||||||    
T  40552536 aaatcacaccaataacaa-cttgatgtgtggagcaagagataattaagcaaccaaaatcaaagcgtatggaataa-taaaat-acgagccaaaagtagaa 40552440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 304 - 407
Target Start/End: Complemental strand, 7188960 - 7188861
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    |||||||| |||||| | |||| ||||||||||||||  ||||||| |||||||||| |||||||||||||  | |||||| |||||| |||||||||||    
T  7188960 aaatcacatcaataaaatacttgatgtgtggagcaagtaataatcaagcaaccaaaa-caaagtgtatgga--agttataaacacaag-caaaagtagaa 7188865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 321 - 405
Target Start/End: Complemental strand, 22108483 - 22108401
Alignment:
Q  321 aacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaa 405  Q
    ||||| ||||||||||||||||||||| | |||||||||||||||| |||||||| || || ||| || ||||||||||||||||    
T  22108483 aacttgatgtgtggagcaagggataattaagcaaccaaaatcaaagcgtatggaataa-taaaat-acgagccaaaagtagaaaa 22108401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 24813365 - 24813506
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    |||||||| |||||| | |||| ||||||||||||||  ||||||| |||||||| ||||| |||   | ||||||||||| || ||  |||||||||||    
T  24813365 aaatcacatcaataaaatacttgatgtgtggagcaagtaataatcaagcaaccaatatcaacgtg---gtaacaattataaacataa-acaaaagtagaa 24813460  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||   | |||||||||||||||| |||||| || |||||||| ||||    
T  24813461 aacaa---cgagagaaaaggaagagagaacacacaa-aatttgtttaccc 24813506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 7349136 - 7349236
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||||| |||||||||| | ||||||||||| ||||||||||  | | ||||||  |||||||||||||| ||    
T  7349136 aaatcacaccaataacaa-cttgatgtgtggagtaagggataattaagcaaccaaaat-aaagtgtatg--aaagttataaatacaagccaaaagta-aa 7349230  T
Q  404 aacaac 409  Q
    ||||||    
T  7349231 aacaac 7349236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 283 - 339
Target Start/End: Original strand, 44016511 - 44016568
Alignment:
Q  283 aattgttttgaattcgttgtgaaatc-acaccaataataaacttaatgtgtggagcaa 339  Q
    ||||||| |||||||||||||||| | ||||||||||||||||| ||| |||||||||    
T  44016511 aattgttgtgaattcgttgtgaaaaccacaccaataataaacttgatgcgtggagcaa 44016568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 360
Target Start/End: Original strand, 1046776 - 1046831
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaa 360  Q
    ||||||||||||||| || ||| |||||||||||||| |||||||| ||||||||||    
T  1046776 aaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagcaaccaaaa 1046831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 360
Target Start/End: Original strand, 20137010 - 20137066
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaa 360  Q
    |||||| || ||||||||| || ||||||||||||||||||| ||| ||||||||||    
T  20137010 aaatcatacgaataataaatttgatgtgtggagcaagggatagtcaagcaaccaaaa 20137066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 392 - 453
Target Start/End: Original strand, 20137061 - 20137118
Alignment:
Q  392 ccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||||||||||||   || ||||||||| |||||| |||||||||||||||||||||||    
T  20137061 ccaaaagtagaaaaca---gcgagagaaaag-aagagagaacacaaaagaatttgttgaccc 20137118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 1049151 - 1049216
Alignment:
Q  307 tcacaccaataataaacttaatgtgtggagcaagggataatcaggcaacc-aaaatcaaagtgtatg 372  Q
    |||||||||||| || ||| |||||||||||||| |||||||| |||||| |||| |||||||||||    
T  1049151 tcacaccaataacaa-cttgatgtgtggagcaagagataatcaagcaaccaaaaaacaaagtgtatg 1049216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 24817220 - 24817265
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatca 349  Q
    ||||||||||||||| | |||||||||||||||||||  |||||||    
T  24817220 aaatcacaccaataaaatacttaatgtgtggagcaagtaataatca 24817265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 448
Target Start/End: Complemental strand, 25276548 - 25276415
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||| ||||   |||||| |||||||| ||||||||| ||  |||||||| |  ||||||  ||||||||||    
T  25276548 aaatcacaccaataacaa-cttgatgtgtggatcaagt--taatcaagcaaccaatatcaaagtggat--aacaattaaa--cacaagtaaaaagtagaa 25276456  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgtt 448  Q
    ||||||    ||||||||  |||||| ||||||||||||||||||    
T  25276455 aacaacg---agagaaaaa-aagagagaacacaaaagaatttgtt 25276415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 111; Significance: 7e-56; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 283 - 453
Target Start/End: Complemental strand, 80308 - 80138
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    |||||||  ||||||| || |||| ||||||||||| |||||| ||||||||||||||  ||||||||||||| ||||||||||||||||||| ||||||    
T  80308 aattgttgcgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaagtaataatcaggcaacgaaaatcaaagtgtatggaaaaattat 80209  T
Q  383 aatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    || ||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  80208 aaacacaagccaaaagtagaaaacaacagcgagagaaaaggaagagagatcacaaaagaatttgttgaccc 80138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 3e-55; HSPs: 86)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 283 - 452
Target Start/End: Original strand, 22802574 - 22802742
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  ||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  22802574 aattgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatggaacaattat 22802672  T
Q  383 aatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgacc 452  Q
    || ||||||||||||||||||| ||||||| |||||||| ||||| | ||||||||||||||||||||||    
T  22802673 aaacacaagccaaaagtagaaagcaacagcgagagaaaaagaagatagaacacaaaagaatttgttgacc 22802742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 292 - 453
Target Start/End: Complemental strand, 40637560 - 40637398
Alignment:
Q  292 gaattcgttgtgaa-atcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaat-caaagtgtatggaacaattataatcaca 389  Q
    |||||||||| ||| ||||||||||||| || ||| ||||||||||||||| ||||||| ||||||||||  ||||||||||||||||||||||||||||    
T  40637560 gaattcgttgagaatatcacaccaataacaa-cttgatgtgtggagcaaggaataatcaagcaaccaaaaaacaaagtgtatggaacaattataatcaca 40637462  T
Q  390 agccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||    
T  40637461 agccaaaagtagaaaacaacagcgagagaaaaagaagagagaacacaaaagaatttgttgaccc 40637398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 306 - 453
Target Start/End: Complemental strand, 24889265 - 24889120
Alignment:
Q  306 atcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaa 405  Q
    ||||||||||||| || ||| ||||||||||||||| ||||||   ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  24889265 atcacaccaataacaa-cttgatgtgtggagcaaggaataatctaacaaccaaaa-caaagtgtatggaacaattataatcacaagccaaaagtagaaaa 24889168  T
Q  406 caacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||    
T  24889167 caacagcgagagaaaaagaagagataacacaaaagaatttgttgaccc 24889120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 304 - 451
Target Start/End: Original strand, 52942348 - 52942495
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||| ||||| ||| || |||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  52942348 aaatcacacaaataacaaatttgatgtgtggagtaagagataatcaggcaatcaaaatcaaagtgtatggaacaattataaacacaagccaaaagtagaa 52942447  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgac 451  Q
    ||||||||| |||| ||| ||||||| |||||||||||||||||||||    
T  52942448 aacaacagcgagaggaaaagaagagagaacacaaaagaatttgttgac 52942495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 22800723 - 22800871
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||| ||||||||||||| ||| |||||||||| |||||| |||||||||||||||| ||||||||||||||||||    
T  22800723 aaatcacaccaataacaaacttgatgtggggagcaagggatagtcaagcaaccaaaa-caaagtatatggaacaattataaacacaagccaaaagtagaa 22800821  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    | ||||||| |||||||| ||||||| |||||||||||||||||||||||    
T  22800822 agcaacagcgagagaaaaagaagagagaacacaaaagaatttgttgaccc 22800871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 283 - 453
Target Start/End: Original strand, 36921335 - 36921502
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    |||||||  ||||||| ||  ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  36921335 aattgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaggcaaccaaaat-aaagtgtatgaaacaattat 36921433  T
Q  383 aatcacaagccaaaagtagaaaacaacagcaagaga-aaaggaagagataacacaaaagaatttgttgaccc 453  Q
    || ||||||||||||||||||   |||||||||||| ||| ||||||| |||||||||||||||||||||||    
T  36921434 aaacacaagccaaaagtagaa---aacagcaagagagaaaagaagagagaacacaaaagaatttgttgaccc 36921502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 36919447 - 36919593
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||    
T  36919447 aaatcacaccaataacaaacttgatgtgtggagcaagggataatcaggcaaccaaaat-aaagtgtatggaacaattataaacacaagtcaaaagtagaa 36919545  T
Q  404 aacaacagcaagaga-aaaggaagagataacacaaaagaatttgttgaccc 453  Q
       |||||| ||||| ||||||||||| |||||||||||||||||||||||    
T  36919546 ---aacagcgagagagaaaggaagagagaacacaaaagaatttgttgaccc 36919593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 286 - 453
Target Start/End: Complemental strand, 2891780 - 2891616
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  ||||||||||||||| |||||| ||||||||||||| | ||||||| ||||||||||| ||||||||||||||||||||||     
T  2891780 tgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaaagaataatcaagcaaccaaaat-aaagtgtatggaacaattataaa 2891682  T
Q  386 cacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||||||||||||||||||||| |  |||| ||||||||||| |||||||||||||||||||||||    
T  2891681 cacaagccaaaagtagaaaacaac-gagagag-aaaggaagagagaacacaaaagaatttgttgaccc 2891616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 38928042 - 38928186
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  38928042 aaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatggaacagttataatcacaagccaaaagtagaa 38928140  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||    ||| ||||| |||||| |||||||||||||||||||||||    
T  38928141 aacaacg---agataaaag-aagagagaacacaaaagaatttgttgaccc 38928186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 17662109 - 17662254
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| |||| ||||  |||||||||||||||||||||||||||| |||||||||||||    
T  17662109 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaatcaaac-caaagtgtatggaacaattataatcacatgccaaaagtagaa 17662206  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||||||  ||||||| ||||||| |||||||||||||||||||||||    
T  17662207 aacaacagc--gagaaaaagaagagagaacacaaaagaatttgttgaccc 17662254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 292 - 453
Target Start/End: Complemental strand, 48486803 - 48486643
Alignment:
Q  292 gaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaag 391  Q
    ||||||| || |||| ||||||||||| ||| || ||| ||||| |||| |||||||| ||||| |||| ||||||| ||||||||||||||| ||||||    
T  48486803 gaattcgatgagaaaacacaccaataacaaatttgatgcgtggaacaagcgataatcaagcaactaaaa-caaagtgaatggaacaattataaacacaag 48486705  T
Q  392 ccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||    
T  48486704 ccaaaagtagaaaacaacatcaagagaaaaggaagagaaaacacaaaataatttgttgaccc 48486643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 303 - 453
Target Start/End: Original strand, 33415351 - 33415497
Alignment:
Q  303 gaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtaga 402  Q
    |||||||||| ||||| |||||| ||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  33415351 gaaatcacacaaataacaaacttgatgtgtggagcaagggatagtcaagcaaccaaaatcaaagtgtatgggacaattataaacacaagccaaaagtaga 33415450  T
Q  403 aaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |   |||||| |||||||| ||||||| ||||||||||||||| |||||||    
T  33415451 a---aacagcgagagaaaa-gaagagagaacacaaaagaatttattgaccc 33415497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 3824467 - 3824619
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagcc-aaaagtag- 401  Q
    ||||||||||||||| |||||| ||||||||||||||||||| ||| ||||||||||||||| ||||||||||| |||||| |||||||| ||||||||     
T  3824467 aaatcacaccaataacaaacttgatgtgtggagcaagggatagtcaagcaaccaaaatcaaaatgtatggaacagttataaacacaagccaaaaagtaga 3824566  T
Q  402 aaaacaacagcaag-agaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||| ||||||| |||||| ||| ||| |||||||||||||||||||||||    
T  3824567 aaaacagcagcaagaagaaaaagaatagagaacacaaaagaatttgttgaccc 3824619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 283 - 445
Target Start/End: Complemental strand, 16453799 - 16453642
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  ||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||| ||||||||||| |||| ||||    
T  16453799 aattgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagtgataatcaggcaaccaaaa-caaagtgtatgaaacagttat 16453701  T
Q  383 aatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaattt 445  Q
    |||||||||||||||||||||||||   |  ||||||||| |||||| |||||||||||||||    
T  16453700 aatcacaagccaaaagtagaaaaca---gtgagagaaaag-aagagagaacacaaaagaattt 16453642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 285 - 453
Target Start/End: Original strand, 24446501 - 24446663
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    ||||| |||||||| || |||| ||||||||||| |||||| ||||||| || |||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  24446501 ttgttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgtgaagtaagggataatcaagcaaccaaaat-aaagtgtatggaaaaattataa 24446599  T
Q  385 tcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
     |||||||||||||||||||||||     |||||||| ||||||| |||||||||||||||||||||||    
T  24446600 acacaagccaaaagtagaaaacaa----gagagaaaa-gaagagagaacacaaaagaatttgttgaccc 24446663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 343 - 453
Target Start/End: Complemental strand, 24879423 - 24879314
Alignment:
Q  343 ataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaa 442  Q
    ||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||    
T  24879423 ataatcaagcaaccaaaa-caaagtgtatggaacaattataaacacaagccaaaagtagaaaacaacagcgagagaaaaggaagagagaacacaagagaa 24879325  T
Q  443 tttgttgaccc 453  Q
    |||||||||||    
T  24879324 tttgttgaccc 24879314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 308 - 452
Target Start/End: Complemental strand, 47563225 - 47563086
Alignment:
Q  308 cacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaaca 407  Q
    ||||||||||| |||||| ||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| || |||||||||||||||   |    
T  47563225 cacaccaataacaaacttgatgtgtggagcaaggaataatcaagcaaccaaaa-caaagtgtatggaacaattataaacataagccaaaagtagaa---a 47563130  T
Q  408 acagcaagagaaaaggaagagataacacaaaagaatttgttgacc 452  Q
    ||||| |||| ||||||||||| ||||||||||||||||||||||    
T  47563129 acagcgagag-aaaggaagagagaacacaaaagaatttgttgacc 47563086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 283 - 453
Target Start/End: Original strand, 14789270 - 14789437
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    |||||||  ||||||| ||  ||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||    
T  14789270 aattgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatgaaacaattat 14789368  T
Q  383 aatcacaagccaaaagtagaaaacaac-agcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    || |||||||||||||||||||||||| ||  |||||||| ||||||| |  ||| ||||||||||||||||    
T  14789369 aaacacaagccaaaagtagaaaacaactag--agagaaaaagaagaga-agaacacaagaatttgttgaccc 14789437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 14787292 - 14787438
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||| ||||||||||||||||||    
T  14787292 aaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatgaaacaattataaacacaagccaaaagtagaa 14787390  T
Q  404 aacaac-agcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||| ||  |||||||| ||||||| |  ||| ||||||||||||||||    
T  14787391 aacaactag--agagaaaaagaagaga-agaacacaagaatttgttgaccc 14787438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 6133307 - 6133161
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    |||| |||||||||| |||||| ||||||||||||||| ||||||| |||||| ||| ||||||||||| ||||||||||| |||||| |||||||||||    
T  6133307 aaattacaccaataacaaacttgatgtgtggagcaaggaataatcaagcaaccgaaa-caaagtgtatgaaacaattataaacacaagtcaaaagtagaa 6133209  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||| |  |||||||| ||||||| |||||||||||||||||||||||    
T  6133208 aacaac-gagagagaaaa-gaagagagaacacaaaagaatttgttgaccc 6133161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 286 - 453
Target Start/End: Complemental strand, 27499536 - 27499366
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  ||||||||||||||| |||||| ||||||||||||| | |||| || |||||||||| |||||| ||||||||||||||||     
T  27499536 tgttctgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaatgaataaccaagcaaccaaaa-caaagtttatggaacaattataaa 27499438  T
Q  386 cacaagccaaaagtagaaaacaac-agcaagaga---aaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||| ||||||||||||||||| ||  |||||   ||||||||||| |||||||||||||||||||||||    
T  27499437 cacaagtcaaaagtagaaaacaacgagagagagagagaaaggaagagagaacacaaaagaatttgttgaccc 27499366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 307 - 453
Target Start/End: Original strand, 40091281 - 40091424
Alignment:
Q  307 tcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaac 406  Q
    |||||||||||| |||||| |||||||||||||  |||||||| ||||||||||| ||||||||||||| |||||||| ||||||||||||||||||       
T  40091281 tcacaccaataacaaacttgatgtgtggagcaaaagataatcaagcaaccaaaat-aaagtgtatggaataattataaacacaagccaaaagtagaa--- 40091376  T
Q  407 aacagcaagaga-aaaggaagagataacacaaaagaatttgttgaccc 453  Q
    || ||||||||| ||| ||||||| |||||||||||||||||||||||    
T  40091377 aatagcaagagagaaaagaagagagaacacaaaagaatttgttgaccc 40091424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 343 - 453
Target Start/End: Complemental strand, 24880887 - 24880776
Alignment:
Q  343 ataatcaggcaaccaaaat-caaagtgtatggaacaattataatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaaga 441  Q
    ||||||| ||||||||||  ||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||    
T  24880887 ataatcaagcaaccaaaacacaaagtgtacggaacaattataaacacaagccaaaagtagaaaacaacagcgagagaaaaggaagagagaacacaagaga 24880788  T
Q  442 atttgttgaccc 453  Q
    ||||||||||||    
T  24880787 atttgttgaccc 24880776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 304 - 407
Target Start/End: Original strand, 37312942 - 37313044
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||| ||||||||||| |||||||||||||| |||||||||||||||    
T  37312942 aaatcacaccaataataaacttgatgtgtggagcaagggatagtcaagcaaccaaaa-caaagtgtatgaaacaattataatcataagccaaaagtagaa 37313040  T
Q  404 aaca 407  Q
    ||||    
T  37313041 aaca 37313044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 303 - 452
Target Start/End: Complemental strand, 13547626 - 13547479
Alignment:
Q  303 gaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtaga 402  Q
    |||| ||||||||||| |||||| ||||||||| |||| |||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13547626 gaaaacacaccaataacaaacttgatgtgtggaacaagtgataattagacaaccaaaatcaaagtgtatggaacaattataaacacaagccaaaagtaga 13547527  T
Q  403 aaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgacc 452  Q
    ||| | | |  |||| ||||||||||| ||||||||| ||||| ||||||    
T  13547526 aaagatc-gagagag-aaaggaagagagaacacaaaaaaatttattgacc 13547479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 286 - 407
Target Start/End: Complemental strand, 16455714 - 16455594
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  ||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||||    
T  16455714 tgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagtgataatcaggcaaccaaaa-caaagtgtatggaacagttataat 16455616  T
Q  386 cacaagccaaaagtagaaaaca 407  Q
    || |||| |||| |||||||||    
T  16455615 cataagctaaaactagaaaaca 16455594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 304 - 409
Target Start/End: Complemental strand, 47868876 - 47868774
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||    
T  47868876 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaa-taaaat-acaagccaaaagtagaa 47868780  T
Q  404 aacaac 409  Q
    ||||||    
T  47868779 aacaac 47868774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 304 - 409
Target Start/End: Complemental strand, 49089026 - 49088922
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| |||||| ||| |||||||| ||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  49089026 aaatcacaccaataacaaacttgatgtgttgagtaagggatagtcaagcaaccaaaa-caaagtgtatggaacaattataaacacaagccaaaagtagaa 49088928  T
Q  404 aacaac 409  Q
    ||||||    
T  49088927 aacaac 49088922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 37089230 - 37089381
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  37089230 aaatcacaccaataacaaacttgatgtgtggagcaatggataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaagccaaaagtagaa 37089326  T
Q  404 aacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  37089327 aacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 37089381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 285 - 407
Target Start/End: Complemental strand, 5101405 - 5101284
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    ||||| |||||||| || |||| ||||||||||| |||||| ||||||||| ||||||||| ||| |||||||||| |||||||||||||||||||||||    
T  5101405 ttgttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgtggatcaagggatagtcaagcaaccaaaa-caaagtgtatggaacaattataa 5101307  T
Q  385 tcacaagccaaaagtagaaaaca 407  Q
     ||||||||||| | ||||||||    
T  5101306 acacaagccaaagggagaaaaca 5101284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 303 - 453
Target Start/End: Original strand, 12395707 - 12395854
Alignment:
Q  303 gaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtaga 402  Q
    |||| ||||||||||| |||||| |||||||||||||| ||||||||||||||||||| ||||| |||| ||| |||||||| |||| ||||||||||||    
T  12395707 gaaaacacaccaataacaaacttgatgtgtggagcaagtgataatcaggcaaccaaaa-caaagagtatcgaaaaattataaacacatgccaaaagtaga 12395805  T
Q  403 aaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    | ||||| |  | || ||||||||||| ||||||||||| |||||||||||    
T  12395806 agacaac-gagacag-aaaggaagagagaacacaaaagagtttgttgaccc 12395854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 303 - 453
Target Start/End: Original strand, 12400669 - 12400816
Alignment:
Q  303 gaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtaga 402  Q
    |||| ||||||||||| |||||| |||||||||||||| ||||||||||||||||||| ||||| |||| ||| |||||||| |||| ||||||||||||    
T  12400669 gaaaacacaccaataacaaacttgatgtgtggagcaagtgataatcaggcaaccaaaa-caaagagtatcgaaaaattataaacacatgccaaaagtaga 12400767  T
Q  403 aaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    | ||||| |  | || ||||||||||| ||||||||||| |||||||||||    
T  12400768 agacaac-gagacag-aaaggaagagagaacacaaaagagtttgttgaccc 12400816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 282 - 408
Target Start/End: Original strand, 47210633 - 47210755
Alignment:
Q  282 taattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaatta 381  Q
    ||||||||  |||||||||||||||||||||||||||  ||||| |||||||||||||| |||||| | |||||||||| ||||||||||||||||||||    
T  47210633 taattgttgcgaattcgttgtgaaatcacaccaataa-caacttgatgtgtggagcaagagataataaagcaaccaaaa-caaagtgtatggaacaatta 47210730  T
Q  382 taatcacaagccaaaagtagaaaacaa 408  Q
     ||| ||||||||||||||||||||||    
T  47210731 -aat-acaagccaaaagtagaaaacaa 47210755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 286 - 453
Target Start/End: Complemental strand, 47275212 - 47275049
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||||||||||| |||| |||||| |||||| |||||||||| |||||||||||| |||| ||||||  |||||||| ||| ||||||||     
T  47275212 tgttgtgaattcgttgtgaaaacacatcaataacaaacttgatgtgtggagtaagggataatcaagcaatcaaaat-gaagtgtatagaataattataaa 47275114  T
Q  386 cacaagccaaaagtagaaaacaacagcaagagaaaaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    ||||||||||||||||||   |||||| |||| |||  ||||| | |||||||||||||||||||||||    
T  47275113 cacaagccaaaagtagaa---aacagcgagag-aaatcaagagaagaacacaaaagaatttgttgaccc 47275049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 11435429 - 11435278
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  11435429 aaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagcaaccaaaaacaaagtgtatggaacaatta-aat-acaagccaaaagtagaa 11435333  T
Q  404 aacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||  || || ||||   ||||||||| | |||||||||||||||||||||||    
T  11435332 aacaatggcgagaagaacacaaggaagagaagaacacaaaagaatttgttgaccc 11435278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 321 - 453
Target Start/End: Complemental strand, 4215756 - 4215630
Alignment:
Q  321 aacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaacaacagcaagagaaa 420  Q
    ||||| ||||||| ||||||| ||||||| ||||| |||| ||||||||||| ||||||||||||||||||||||||||||||   ||| || |||||||    
T  4215756 aacttgatgtgtgaagcaaggaataatcaagcaacaaaaa-caaagtgtatgaaacaattataatcacaagccaaaagtagaa---aactgcgagagaaa 4215661  T
Q  421 aggaagagataacacaaaagaatttgttgaccc 453  Q
    || |||||  |||||||||||||||||||||||    
T  4215660 agaaagag--aacacaaaagaatttgttgaccc 4215630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 285 - 453
Target Start/End: Complemental strand, 11437856 - 11437686
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    ||||| |||||||| ||  ||||||||||||||| || ||| |||| ||||||||| |||||||| ||| |||||| |||||||||||||||||||| ||    
T  11437856 ttgttgtgaattcgatgaaaaatcacaccaataacaa-cttgatgtatggagcaagagataatcaagcagccaaaaacaaagtgtatggaacaatta-aa 11437759  T
Q  385 tcacaagccaaaagtagaaaacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    | ||||||||||||||||||||||| || || ||||   ||||||||| | |||||||||||||||||||||||    
T  11437758 t-acaagccaaaagtagaaaacaacggcgagaagaacacaaggaagagaagaacacaaaagaatttgttgaccc 11437686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 2484732 - 2484833
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| |||||||||||||||||    
T  2484732 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaat-aaagtgtatggaacaatta-aat-acaagccaaaagtagaa 2484827  T
Q  404 aacaac 409  Q
    ||||||    
T  2484828 aacaac 2484833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 407
Target Start/End: Complemental strand, 53405629 - 53405508
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    |||||||  ||||||| ||  |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| ||||||||  | ||||    
T  53405629 aattgttgcgaattcgatgaaaaatcacaccaataataaacttgatgtgtggagcaagggataatcaagcaaccaaaa-caaaatgtatgga--agttat 53405533  T
Q  383 aatcacaagccaaaagtagaaaaca 407  Q
    ||  |||||||||||||||||||||    
T  53405532 aaatacaagccaaaagtagaaaaca 53405508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 5635335 - 5635485
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||||||||||||||||||  ||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  5635335 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaatcaaccaaaa-caaagtgtatggaacaatta-aat-acaagccaaaagtagaa 5635430  T
Q  404 aacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  5635431 aacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 5635485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 308 - 453
Target Start/End: Complemental strand, 51015715 - 51015569
Alignment:
Q  308 cacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaaca 407  Q
    ||||||||||| || ||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||    
T  51015715 cacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaagccaaaagtagaaaaca 51015620  T
Q  408 acagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    || || || ||||   || |||||| | |||||||||||||||||||||||    
T  51015619 acggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 51015569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 304 - 405
Target Start/End: Original strand, 18409211 - 18409309
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    |||||||||||||||||||||| |||||||||||||| |||| ||| |||||||||| |||||||||||||  | ||||||||||||| |||||||||||    
T  18409211 aaatcacaccaataataaacttgatgtgtggagcaagtgatagtcaagcaaccaaaa-caaagtgtatgga--agttataatcacaagacaaaagtagaa 18409307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 304 - 405
Target Start/End: Complemental strand, 5198878 - 5198781
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  5198878 aaatcacaccaataataa-cttgatgtgtggagcaatggataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaagccaaaagtagaa 5198783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 284 - 409
Target Start/End: Original strand, 16931629 - 16931750
Alignment:
Q  284 attgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattata 383  Q
    |||||| |||||||| ||  ||||||||||||||| || ||||||||||||||||||||||||| | |||||||||| ||||| |||||||| ||||| |    
T  16931629 attgttgtgaattcgatgaaaaatcacaccaataacaa-cttaatgtgtggagcaagggataattaagcaaccaaaa-caaagcgtatggaataatta-a 16931725  T
Q  384 atcacaagccaaaagtagaaaacaac 409  Q
    || |||||||||||||||||||||||    
T  16931726 at-acaagccaaaagtagaaaacaac 16931750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 22044250 - 22044400
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    |||| |||||||||| || ||| ||||||||||||||||||||||| |||||||||| ||||||||||| |||||||| ||| |||||||||||||||||    
T  22044250 aaataacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatgaaacaatta-aat-acaagccaaaagtagaa 22044345  T
Q  404 aacaacagcaag----agaaaaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || ||    | |||| |||||| | |||||||||||||||||||||||    
T  22044346 aacaacggcgagaagaacaaaaagaagagaagaacacaaaagaatttgttgaccc 22044400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 22046545 - 22046646
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| ||||| |||||||||||    
T  22046545 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaagtcaaaagtagaa 22046640  T
Q  404 aacaac 409  Q
    ||||||    
T  22046641 aacaac 22046646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 292 - 453
Target Start/End: Complemental strand, 14633804 - 14633642
Alignment:
Q  292 gaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaag 391  Q
    ||||||| || |||||||||||||||| || ||| |||||||||||||| |||||||| |||||| ||| |||| ||||||||||||||| ||| |||||    
T  14633804 gaattcgatgagaaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagcaaccgaaa-caaaatgtatggaacaatta-aat-acaag 14633709  T
Q  392 ccaaaagtagaaaacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||||||||||||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  14633708 ccaaaagtagaaaacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 14633642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 36378760 - 36378617
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| | |||| || |||||||||||  ||||||| |||||||||  ||||||||||| ||||||||||| ||||| | ||||||||||    
T  36378760 aaatcacaccaataaaatacttgatatgtggagcaagtaataatcaagcaaccaaa--caaagtgtatgaaacaattataaacacaaacgaaaagtagaa 36378663  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
       ||||||| ||||||| ||||||| ||||||||| |||||||| ||||    
T  36378662 ---aacagcaggagaaaa-gaagagagaacacaaaataatttgtttaccc 36378617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 278 - 405
Target Start/End: Original strand, 11006086 - 11006209
Alignment:
Q  278 aatataattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaaca 377  Q
    |||||||||||| |||||||| |   ||| ||||||||||| || ||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  11006086 aatataattgttgtgaattcgatcgaaaaacacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatggaaca 11006183  T
Q  378 attataatcacaagccaaaagtagaaaa 405  Q
    |||| ||| |||||| ||||||||||||    
T  11006184 atta-aat-acaagcaaaaagtagaaaa 11006209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 305 - 400
Target Start/End: Original strand, 22132248 - 22132340
Alignment:
Q  305 aatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagta 400  Q
    |||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| ||||||||||||||    
T  22132248 aatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaaacaaagtgtatggaacaatta-aat-acaagccaaaagta 22132340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 305 - 451
Target Start/End: Original strand, 26085836 - 26085984
Alignment:
Q  305 aatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaa 404  Q
    |||||||||||||| || ||| ||||||||||||||||||| ||| ||||||||||||||||||||||  | | ||||||  ||||||||||||||||||    
T  26085836 aatcacaccaataacaa-cttgatgtgtggagcaagggatagtcaagcaaccaaaatcaaagtgtatg--aaagttataaatacaagccaaaagtagaaa 26085932  T
Q  405 acaacagcaagagaa----aaggaagag-ataacacaaaagaatttgttgac 451  Q
    ||||| || ||| ||    || |||||| | |||||||||||||||||||||    
T  26085933 acaacggcgagaaaaacacaaagaagagaagaacacaaaagaatttgttgac 26085984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 286 - 409
Target Start/End: Complemental strand, 6765335 - 6765217
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  ||||||||||||||| |||||| |||||||||| |||||||||||| |||||||||| ||||||||||||   ||||||||     
T  6765335 tgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagtaagggataatcaagcaaccaaaa-caaagtgtatgg---aattataaa 6765240  T
Q  386 cacaagccaaaagtagaaaacaac 409  Q
     ||||||| |||||||||||||||    
T  6765239 tacaagcc-aaagtagaaaacaac 6765217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 405
Target Start/End: Original strand, 8631277 - 8631374
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| ||||| |||| |||||||||||||||||||| ||| |||||||||||||||||    
T  8631277 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaactaaaa-caaagtgtatggaacaatta-aat-acaagccaaaagtagaa 8631372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 292 - 409
Target Start/End: Complemental strand, 9148721 - 9148608
Alignment:
Q  292 gaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaag 391  Q
    ||||||| || |||| ||||||||||| || ||| ||||||||| |||| |||||||| |||||||||| |||||||||||||||||||| ||| |||||    
T  9148721 gaattcgatgagaaaacacaccaataacaa-cttgatgtgtggaacaagagataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaag 9148626  T
Q  392 ccaaaagtagaaaacaac 409  Q
    ||||||||||||||||||    
T  9148625 ccaaaagtagaaaacaac 9148608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 405
Target Start/End: Original strand, 9176332 - 9176429
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| |||||||||||||| ||||| ||| |||||||||||||||||    
T  9176332 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatggaataatta-aat-acaagccaaaagtagaa 9176427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 409
Target Start/End: Complemental strand, 24348675 - 24348574
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||| || ||| ||||||||||| |||||    
T  24348675 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatggaacaacta-aat-acaagccaaaaatagaa 24348580  T
Q  404 aacaac 409  Q
    ||||||    
T  24348579 aacaac 24348574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 405
Target Start/End: Original strand, 31849457 - 31849554
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  31849457 aaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaagccaaaagtagaa 31849552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 36380817 - 36380674
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| | | || |||||||||| |||  || |||| |||| ||||  ||||||||||| ||||||||||| ||||||||||||||||||    
T  36380817 aaatcacaccaataaaatatttgatgtgtggagtaagtaatgatcaagcaatcaaa--caaagtgtatgaaacaattataaacacaagccaaaagtagaa 36380720  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
       ||||| | ||||||| ||||||| |||||||||||||||||| ||||    
T  36380719 ---aacagaaggagaaaa-gaagagagaacacaaaagaatttgtttaccc 36380674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 283 - 405
Target Start/End: Original strand, 11008405 - 11008523
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| |   ||| ||||||||||| || ||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||     
T  11008405 aattgttgtgaattcgatcgaaaaacacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatggaacaatta- 11008501  T
Q  383 aatcacaagccaaaagtagaaaa 405  Q
    ||| |||||| ||||||||||||    
T  11008502 aat-acaagcaaaaagtagaaaa 11008523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 308 - 409
Target Start/End: Complemental strand, 38409674 - 38409577
Alignment:
Q  308 cacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaaca 407  Q
    ||||||||||| || ||| ||||||||||||||||||||||| ||||| |||| |||| ||||||||||||||| ||| |||||||||||||||||||||    
T  38409674 cacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaactaaaa-caaattgtatggaacaatta-aat-acaagccaaaagtagaaaaca 38409579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 308 - 407
Target Start/End: Complemental strand, 41997953 - 41997858
Alignment:
Q  308 cacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaaca 407  Q
    |||||||||||||||||| |||||||||| ||| |||||||| |||||||||| |||||||||||||  | ||||||||||||  |||||||||||||||    
T  41997953 cacaccaataataaacttgatgtgtggagaaagtgataatcaagcaaccaaaa-caaagtgtatgga--agttataatcacaa-acaaaagtagaaaaca 41997858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 294 - 453
Target Start/End: Original strand, 619306 - 619457
Alignment:
Q  294 attcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagcc 393  Q
    ||||| || |||| ||||||||||||||| || |||||||||| |||||||| ||| |||||||| |   ||||| ||   ||| ||||||||||||||     
T  619306 attcgatgagaaaacacaccaataataaatttgatgtgtggagtaagggatagtcaagcaaccaatac--aagtggatc--acagttataatcacaagc- 619400  T
Q  394 aaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||||||||||||||||   || ||| |||||| ||||||||| |||||||||||||    
T  619401 aaaagtagaaaacaacagca---gagaagaaagagagaacacaaaataatttgttgaccc 619457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 304 - 409
Target Start/End: Complemental strand, 18847626 - 18847525
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagcc-aaaagtaga 402  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||  |||||||||||||| ||||| ||| ||||||| |||||||||    
T  18847626 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaa--caaagtgtatggaataatta-aat-acaagccaaaaagtaga 18847532  T
Q  403 aaacaac 409  Q
    |||||||    
T  18847531 aaacaac 18847525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 305 - 400
Target Start/End: Original strand, 22134476 - 22134567
Alignment:
Q  305 aatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagta 400  Q
    |||||||||||||| || ||| |||||||||||||||||||||||  ||||||||| |||||||||||||||||||| ||| ||||||||||||||    
T  22134476 aatcacaccaataacaa-cttgatgtgtggagcaagggataatcaaacaaccaaaa-caaagtgtatggaacaatta-aat-acaagccaaaagta 22134567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 22782595 - 22782697
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||| | |||||||||| ||||| |||||  | | ||||||  |||||||||||||||||    
T  22782595 aaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagcaaccaaaaacaaagcgtatg--aaagttataaatacaagccaaaagtagaa 22782691  T
Q  404 aacaac 409  Q
    ||||||    
T  22782692 aacaac 22782697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 3937144 - 3937283
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||| ||||||||||||||||| |||||||||  |||||||||||||| |  || ||||||||  |||||||||||    
T  3937144 aaatcacaccaataacaa-cttgatgtgaggagcaagggataatcaagcaaccaaa--caaagtgtatggaaga--taaaatcacaa-acaaaagtagaa 3937237  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||   | |||| |||| |||||| |||||||| ||||||||||||||    
T  3937238 aacaa---cgagag-aaagaaagagagaacacaaatgaatttgttgaccc 3937283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 436
Target Start/End: Complemental strand, 5664705 - 5664576
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| | |||| |||||||||| | |  ||||||| |||||||||| ||||||||||||||   ||||||| |||| ||||||||||||    
T  5664705 aaatcacaccaataaaatacttgatgtgtggagaaggtaataatcaagcaaccaaaa-caaagtgtatggaag--ttataatgacaaaccaaaagtagaa 5664609  T
Q  404 aacaacagcaagagaaaaggaagagataacaca 436  Q
    ||||  | | ||||||||| |||||| ||||||    
T  5664608 aacattaacgagagaaaagaaagagagaacaca 5664576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 405
Target Start/End: Original strand, 9174004 - 9174101
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||| ||||| || ||| ||||||||||||||||||||||| |||||||||| ||||||||||| || ||||| ||| |||||||||||||||||    
T  9174004 aaatcacactaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatgaaataatta-aat-acaagccaaaagtagaa 9174099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 408
Target Start/End: Complemental strand, 7941797 - 7941697
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    |||||||||||| || || ||| ||||||||||||||||||||| | |||||||||| |||||||||||||||||| | ||| ||||| |||||||||||    
T  7941797 aaatcacaccaacaacaa-cttgatgtgtggagcaagggataattaagcaaccaaaa-caaagtgtatggaacaatga-aat-acaaggcaaaagtagaa 7941702  T
Q  404 aacaa 408  Q
    |||||    
T  7941701 aacaa 7941697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 375
Target Start/End: Complemental strand, 56030927 - 56030857
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaa 375  Q
    |||||||||||||||||||||| || ||||||||||| |||| ||| |||||||||| ||||||||||||||    
T  56030927 aaatcacaccaataataaacttgatatgtggagcaagagatagtcacgcaaccaaaa-caaagtgtatggaa 56030857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 283 - 409
Target Start/End: Original strand, 16933985 - 16934104
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  ||||||||||||||| || ||||||||||||||||||||  ||| | ||||||||||   ||| |||||||| |||||     
T  16933985 aattgttgtgaattcgatgaaaaatcacaccaataacaa-cttaatgtgtggagcaaggg--aattaagcaaccaaaa--caagcgtatggaataatta- 16934078  T
Q  383 aatcacaagccaaaagtagaaaacaac 409  Q
    ||| |||||||||||||||||||||||    
T  16934079 aat-acaagccaaaagtagaaaacaac 16934104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 448
Target Start/End: Complemental strand, 30136945 - 30136879
Alignment:
Q  379 ttataatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgtt 448  Q
    |||||| ||||| |||||||||||||||||||   ||||||||| |||||| ||||||||||||||||||    
T  30136945 ttataaacacaaaccaaaagtagaaaacaaca---agagaaaagaaagagagaacacaaaagaatttgtt 30136879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 308 - 409
Target Start/End: Original strand, 18709026 - 18709123
Alignment:
Q  308 cacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaaca 407  Q
    ||||||||||| || ||| ||||||||||||||| ||||||| |||||||||| |||||||||||  | | ||||||  ||||||||| |||||||||||    
T  18709026 cacaccaataacaa-cttgatgtgtggagcaaggcataatcaagcaaccaaaa-caaagtgtatg--aaagttataaatacaagccaatagtagaaaaca 18709121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 22780230 - 22780332
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||| | |||||||||| ||||| ||||   | | ||||||  | |||||||||||||||    
T  22780230 aaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagcaaccaaaaacaaagcgtat--caaagttataaatataagccaaaagtagaa 22780326  T
Q  404 aacaac 409  Q
    ||||||    
T  22780327 aacaac 22780332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 44599698 - 44599798
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||| ||||| | |||||||||| ||||| |||||||| ||||| ||| ||||| |||||||||||    
T  44599698 aaatcacaccaataacaa-cttgatgtgtggagcaagg-ataattaagcaaccaaaa-caaagcgtatggaataatta-aat-acaaggcaaaagtagaa 44599792  T
Q  404 aacaac 409  Q
    ||||||    
T  44599793 aacaac 44599798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 375
Target Start/End: Original strand, 18534703 - 18534770
Alignment:
Q  307 tcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaa 375  Q
    |||||||||||| | |||| ||||||||||||||  ||||||| |||||||||| ||||||||||||||    
T  18534703 tcacaccaataaaatacttgatgtgtggagcaagtaataatcaagcaaccaaaa-caaagtgtatggaa 18534770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 436
Target Start/End: Original strand, 38890092 - 38890217
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| | | || || |||||||||||| ||||||  |||||||||  |||||||||||||  | |||||| |||||| ||||| |||||    
T  38890092 aaatcacaccaataaaatatttgatatgtggagcaaggaataatctagcaaccaaa--caaagtgtatgga--agttataaacacaaggcaaaattagaa 38890187  T
Q  404 aacaacagcaagagaaaaggaagagataacaca 436  Q
       |||||| ||||||||| |||||| ||||||    
T  38890188 ---aacagcgagagaaaagaaagagagaacaca 38890217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 375
Target Start/End: Complemental strand, 19323160 - 19323090
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaa 375  Q
    ||||||||||||||| | |||| ||||||||||||||  ||||||| ||||| ||||| |||||||||||||    
T  19323160 aaatcacaccaataaaatacttgatgtgtggagcaagtaataatcaagcaactaaaat-aaagtgtatggaa 19323090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 303 - 384
Target Start/End: Original strand, 38270011 - 38270088
Alignment:
Q  303 gaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    |||| ||||||||||| |||||| |||||||||| |||||||| ||| |||||||||| |||   |||||||||||||||||    
T  38270011 gaaaacacaccaataacaaacttgatgtgtggagtaagggatagtcaagcaaccaaaa-caa---gtatggaacaattataa 38270088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 304 - 345
Target Start/End: Original strand, 18311234 - 18311275
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggata 345  Q
    |||||||||||||||||||||| |||||||||||||| ||||    
T  18311234 aaatcacaccaataataaacttgatgtgtggagcaagtgata 18311275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 375
Target Start/End: Original strand, 15032411 - 15032480
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaa 375  Q
    ||||||||||||||| | |||| ||||| ||||||||  ||||||| |||||||||  ||||||||||||||    
T  15032411 aaatcacaccaataaaatacttgatgtgcggagcaagtaataatcaagcaaccaaa--caaagtgtatggaa 15032480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 283 - 339
Target Start/End: Complemental strand, 4558642 - 4558585
Alignment:
Q  283 aattgttttgaattcgttgtgaaatc-acaccaataataaacttaatgtgtggagcaa 339  Q
    ||||||| ||||||||||| |||| | ||||||||||||||||| ||| |||||||||    
T  4558642 aattgttgtgaattcgttgagaaaaccacaccaataataaacttgatgcgtggagcaa 4558585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 360
Target Start/End: Original strand, 8756120 - 8756176
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaa 360  Q
    |||||||| |||||| | |||| ||||||||||||||  ||||||| ||||||||||    
T  8756120 aaatcacatcaataaaatacttgatgtgtggagcaagtaataatcaagcaaccaaaa 8756176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 407
Target Start/End: Complemental strand, 12102549 - 12102450
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    |||||||||||||||   |||| ||||||||||||||  |||| |  |||||||||| |||||||||||||  | |||||| |||||| |||||||| ||    
T  12102549 aaatcacaccaataaactacttgatgtgtggagcaagtaataaccgagcaaccaaaa-caaagtgtatgga--agttataaacacaag-caaaagtaaaa 12102454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 307 - 375
Target Start/End: Original strand, 18537345 - 18537412
Alignment:
Q  307 tcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaa 375  Q
    ||||||| |||| | |||| ||||||||||||||  ||||||| |||| ||||| ||||||||||||||    
T  18537345 tcacacctataaaatacttgatgtgtggagcaagtaataatcaagcaatcaaaa-caaagtgtatggaa 18537412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 31983402 - 31983501
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    |||||||| |||||| | | || |||||||||||||   ||||||| |||||||| ||||| |||   ||||||||||||| ||||||  ||||||||||    
T  31983402 aaatcacatcaataaaatatttgatgtgtggagcaa--aataatcaagcaaccaatatcaacgtg---ggaacaattataaacacaag-taaaagtagaa 31983495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 3e-55; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 283 - 451
Target Start/End: Original strand, 21520531 - 21520700
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    |||||||  ||||||| || |||| ||||||||||| |||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  21520531 aattgttgcgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaagtgataatcaggcaaccaaaattaaagtgtatggaacaattat 21520630  T
Q  383 aatcacaagccaaaagtagaaaacaacagcaagaga-aaaggaagagataacacaaaagaatttgttgac 451  Q
    || ||||||||||||||||||||||||||| ||||| ||| ||||||| |||||||||||||||||||||    
T  21520631 aaacacaagccaaaagtagaaaacaacagcgagagagaaacgaagagagaacacaaaagaatttgttgac 21520700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 304 - 452
Target Start/End: Original strand, 43623441 - 43623588
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    |||||||||||||||  ||||| |||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  43623441 aaatcacaccaataactaacttgatgtgtggagcaatagataatcaggcaaccaaaattaaagtgtatggaacaattataatcataagccaaaagtagaa 43623540  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgacc 452  Q
    ||||||||| |||||||| ||||||| ||||||||||||||||||||||    
T  43623541 aacaacagcgagagaaaa-gaagagagaacacaaaagaatttgttgacc 43623588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 285 - 453
Target Start/End: Original strand, 42923350 - 42923518
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    ||||| |||||||||||||||| ||||||||||| |||||| |||||||||||||| |||||||| |||||||||| ||||||||||| |||||||||||    
T  42923350 ttgttgtgaattcgttgtgaaaacacaccaataacaaacttgatgtgtggagcaagagataatcaagcaaccaaaaacaaagtgtatgaaacaattataa 42923449  T
Q  385 tcacaagccaaaagtagaaaacaac-agcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
     |||||| ||||||||||||||||| ||  |||||||| ||||||| |||||||||||||||||||||||    
T  42923450 acacaagtcaaaagtagaaaacaacgagagagagaaaa-gaagagagaacacaaaagaatttgttgaccc 42923518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 17849509 - 17849363
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||| ||| ||||||||||||||||||    
T  17849509 aaatcacaccaataacaaacttgatgtgtggagcaagggatagtcaagcaaccaaaa-caaagtgtatggaacaattttaaacacaagccaaaagtagaa 17849411  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||| |  |||| ||||||||||| |||||||||||||||||||||||    
T  17849410 aacaac-gggagag-aaaggaagagagaacacaaaagaatttgttgaccc 17849363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 285 - 453
Target Start/End: Complemental strand, 3022583 - 3022418
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    ||||| |||||||| || || ||||||| ||||| |||||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||    
T  3022583 ttgttgtgaattcggtgagagatcacacaaataacaaacttgatgtgtggagcaagtgataatcaagcaaccaaaa-caaagtgtatggaacaattataa 3022485  T
Q  385 tcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
     ||||||||||||| |||||||||| |  ||| |||||||||||| |||||||||||||||||||||||    
T  3022484 acacaagccaaaagcagaaaacaac-gagaga-aaaaggaagagagaacacaaaagaatttgttgaccc 3022418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 291 - 453
Target Start/End: Original strand, 6258667 - 6258826
Alignment:
Q  291 tgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaa 390  Q
    |||||||| || |||| || |||||||| |||||| |||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||| |||||    
T  6258667 tgaattcgatgagaaaacataccaataacaaacttgatgtgtggagcaagtgataatcaggcaaccaaaa-caaagtgtctggaacaattataaacacaa 6258765  T
Q  391 gccaaaagtagaaaacaacagcaagaga-aaaggaagagataacacaaaagaatttgttgaccc 453  Q
    || ||||||||||   |||||| ||||| ||||||||||| |||||||||||||||||||||||    
T  6258766 gctaaaagtagaa---aacagcgagagagaaaggaagagagaacacaaaagaatttgttgaccc 6258826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 304 - 452
Target Start/End: Complemental strand, 19008032 - 19007887
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  19008032 aaatcacaccaataacaaacttgatgtgtggagcaaggaataatcaagcaaccaaaa-caaagtgtatggaacaattataaacacaagccaaaagtagaa 19007934  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgacc 452  Q
    |||||| |  |||| ||| ||| ||| ||||||||||||||||||||||    
T  19007933 aacaac-gagagag-aaatgaatagagaacacaaaagaatttgttgacc 19007887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 283 - 453
Target Start/End: Original strand, 6263990 - 6264157
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| || |||| ||||| ||||| |||||| |||||||||||||| ||  ||||||||||||||| |||||||||||||||||||||    
T  6263990 aattgttgtgaattcgatgagaaaacacactaataacaaacttgatgtgtggagcaagtgactatcaggcaaccaaaa-caaagtgtatggaacaattat 6264088  T
Q  383 aatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
     | |||||||| ||||||||||||||| |  |||| ||||||||||| |||||||||||||||||||||||    
T  6264089 taacacaagccgaaagtagaaaacaac-gagagag-aaaggaagagagaacacaaaagaatttgttgaccc 6264157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 285 - 453
Target Start/End: Original strand, 22287180 - 22287345
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    ||||| |||||||| || |||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||||||| || ||||||||||||||||||||    
T  22287180 ttgttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaagggatagtcaagcaaccaaaa-catagtgtatggaacaattataa 22287278  T
Q  385 tcacaagccaaaagtagaaaacaacagcaagaga-aaaggaagagataacacaaaagaatttgttgaccc 453  Q
      ||||| |||| ||||||   |||||| ||||| ||||||||||| |||||||||||||||||||||||    
T  22287279 aaacaagtcaaacgtagaa---aacagcgagagagaaaggaagagagaacacaaaagaatttgttgaccc 22287345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 315 - 437
Target Start/End: Original strand, 7462819 - 7462940
Alignment:
Q  315 ataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaacaacagcaa 414  Q
    |||| |||||| ||||||||||||| ||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  7462819 ataacaaacttgatgtgtggagcaaaggataatcaagcaaccaaaa-caaagtgtatgaaacaattataatcacaagccaaaagtagaaaacaacagcga 7462917  T
Q  415 gagaaaaggaagagataacacaa 437  Q
    ||||||  ||||||| |||||||    
T  7462918 gagaaagagaagagagaacacaa 7462940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 286 - 451
Target Start/End: Complemental strand, 14837679 - 14837516
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataa-acttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    |||| |||||||| || ||||||||| |||||| || |||| |||||||||||||| |||||||| |||||||||| |||||||||| ||||||||||||    
T  14837679 tgttgtgaattcgatgagaaatcacatcaataacaatacttgatgtgtggagcaagtgataatcaagcaaccaaaa-caaagtgtatagaacaattataa 14837581  T
Q  385 tcacaagccaaaagtagaaaacaacagcaagaga-aaaggaagagataacacaaaagaatttgttgac 451  Q
     ||||||||||||||| ||   |||||| ||||| ||||||||||| |||||||||||||||||||||    
T  14837580 acacaagccaaaagtataa---aacagcgagagagaaaggaagagagaacacaaaagaatttgttgac 14837516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 28197027 - 28196881
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| ||| || ||||||||||||||||||| ||  |||||||||| ||||||||||| ||||||||||| ||||||||||||||||||    
T  28197027 aaatcacaccaataacaaatttgatgtgtggagcaagggatagtccagcaaccaaaa-caaagtgtatgaaacaattataaacacaagccaaaagtagaa 28196929  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||| | |  |||||||| ||||||| |||||||||||||||||||||||    
T  28196928 aacagc-gagagagaaaa-gaagagagaacacaaaagaatttgttgaccc 28196881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 292 - 453
Target Start/End: Original strand, 22162875 - 22163031
Alignment:
Q  292 gaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaag 391  Q
    ||||||| || |||| ||||||||||| ||  || ||||||| ||||||||||||||| |||||||||| |||| ||||||||||| |||||| ||||||    
T  22162875 gaattcgatgagaaaacacaccaataacaattttgatgtgtgaagcaagggataatcaagcaaccaaaa-caaattgtatggaacagttataagcacaag 22162973  T
Q  392 ccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||||||||||||||   | |||||||| ||||||| |||||||||||||||||||||||    
T  22162974 ccaaaagtagaaaacaa---cgagagaaaa-gaagagagaacacaaaagaatttgttgaccc 22163031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 307 - 453
Target Start/End: Original strand, 15539396 - 15539538
Alignment:
Q  307 tcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaac 406  Q
    |||||||||||| |||||| ||||||||||||||| || |||| |||| ||||| |||||||||| |||||||||||| ||||||| |||||||||||||    
T  15539396 tcacaccaataacaaacttgatgtgtggagcaagg-attatcaagcaatcaaaa-caaagtgtattgaacaattataaacacaagcaaaaagtagaaaac 15539493  T
Q  407 aacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||| |  |||| ||||||||||| |||||||||||||||||||||||    
T  15539494 aac-gagagag-aaaggaagagagaacacaaaagaatttgttgaccc 15539538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 304 - 448
Target Start/End: Original strand, 28459055 - 28459194
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| | |||| |||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||| ||||| ||||||||||||    
T  28459055 aaatcacaccaataaaacacttgatgtgtggagcaagtgataatcaagcaaccaaaa-caaagtgtatggaacaattataaacacaaaccaaaagtagaa 28459153  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgtt 448  Q
    ||||   |  ||||||| | |||||| ||||||||||||||||||    
T  28459154 aaca---gggagagaaa-gaaagagagaacacaaaagaatttgtt 28459194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 314 - 453
Target Start/End: Original strand, 5375218 - 5375355
Alignment:
Q  314 aataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaacaacagca 413  Q
    ||||| |||||| |||||||||| |||||||||||| |||| ||||| |||||||||||||||||||||||  ||||| |||||||  |||| |||||||    
T  5375218 aataacaaacttgatgtgtggagtaagggataatcaagcaatcaaaa-caaagtgtatggaacaattataaatacaagtcaaaagt--aaaaaaacagca 5375314  T
Q  414 agaga-aaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||| ||| ||||||| |||||||||||||||||||||||    
T  5375315 agagagaaaagaagagagaacacaaaagaatttgttgaccc 5375355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 23452095 - 23452246
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||| ||||||||||    
T  23452095 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaatcaaagtgtatggaacaatta-aat-acaagctaaaagtagaa 23452191  T
Q  404 aacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  23452192 aacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 23452246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 27105194 - 27105043
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||  ||||||||||||||||    
T  27105194 aaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-gcaagccaaaagtagaa 27105098  T
Q  404 aacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  27105097 aacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 27105043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 291 - 407
Target Start/End: Complemental strand, 38020485 - 38020370
Alignment:
Q  291 tgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaa 390  Q
    |||||| | ||| ||||||||||||||| ||| || |||| |||||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||    
T  38020485 tgaatttgatgtaaaatcacaccaataacaaatttgatgtatggagcaaggaataatcaagcaaccaaaa-caaagtgtatggaacaattataatcacaa 38020387  T
Q  391 gccaaaagtagaaaaca 407  Q
    || ||||||||||||||    
T  38020386 gctaaaagtagaaaaca 38020370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 308 - 452
Target Start/End: Original strand, 22707618 - 22707759
Alignment:
Q  308 cacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaaca 407  Q
    ||||||||||| ||| || |||||||||| |||| | ||||| |||||||||| ||||||||||||||||||||||| |||||| || ||||||||   |    
T  22707618 cacaccaataacaaatttgatgtgtggagtaaggaacaatcaagcaaccaaaa-caaagtgtatggaacaattataaacacaaggcagaagtagaa---a 22707713  T
Q  408 acagcaagaga-aaaggaagagataacacaaaagaatttgttgacc 452  Q
    ||||| ||||| ||||||||||| ||||||||||||||||||||||    
T  22707714 acagcgagagagaaaggaagagagaacacaaaagaatttgttgacc 22707759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 304 - 452
Target Start/End: Original strand, 45238860 - 45239005
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtat-ggaacaattataatcacaagccaaaagtaga 402  Q
    |||||||||||||||||||||| ||||||||| |||| |||| ||| |||||||||||| ||||| ||   |||| ||||||||||||||||||||||||    
T  45238860 aaatcacaccaataataaacttgatgtgtggaccaagcgatagtcaagcaaccaaaatcgaagtggatatcaacagttataatcacaagccaaaagtaga 45238959  T
Q  403 aaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgacc 452  Q
    |   |||||| |||||||| ||||||| ||||||||| ||||||||||||    
T  45238960 a---aacagcgagagaaaa-gaagagagaacacaaaaaaatttgttgacc 45239005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 333 - 452
Target Start/End: Original strand, 22407346 - 22407462
Alignment:
Q  333 ggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataa 432  Q
    |||||||| |||| ||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| | |  |||| ||||||||||| ||    
T  22407346 ggagcaagagatagtcaagcaaccaaaa-caaagtgtatggaacaattataaacacaagccaaaagtagaaaacatc-gagagag-aaaggaagagagaa 22407442  T
Q  433 cacaaaagaatttgttgacc 452  Q
    ||||||||||||||||||||    
T  22407443 cacaaaagaatttgttgacc 22407462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 321 - 453
Target Start/End: Complemental strand, 17848814 - 17848686
Alignment:
Q  321 aacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaacaacagcaagagaaa 420  Q
    ||||| |||||||||||||| |||||||| ||||||||||||  |||||||| ||||||||||| | ||| | ||||||||||   |||||| |||||||    
T  17848814 aacttgatgtgtggagcaagtgataatcaagcaaccaaaatcgcagtgtatgaaacaattataaacgcaaacaaaaagtagaa---aacagcgagagaaa 17848718  T
Q  421 aggaagagataacacaaaagaatttgttgaccc 453  Q
    | ||||||| |||||||||||||||||||||||    
T  17848717 a-gaagagagaacacaaaagaatttgttgaccc 17848686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 292 - 409
Target Start/End: Original strand, 45279848 - 45279961
Alignment:
Q  292 gaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaag 391  Q
    ||||||| || |||||||||||||||| || ||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||| ||| |||||    
T  45279848 gaattcgatgagaaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaag 45279943  T
Q  392 ccaaaagtagaaaacaac 409  Q
    ||||||||||||||||||    
T  45279944 ccaaaagtagaaaacaac 45279961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 362 - 453
Target Start/End: Original strand, 40031972 - 40032062
Alignment:
Q  362 caaagtgtatggaacaattataatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||| |||||||||||||||| ||||||| ||| ||||||||||||||| |||||||||||||||| || ||||||||||||||||||||    
T  40031972 caaagtatatggaacaattataaacacaagc-aaatgtagaaaacaacagcgagagaaaaggaagagagaatacaaaagaatttgttgaccc 40032062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 307 - 453
Target Start/End: Original strand, 13909907 - 13910054
Alignment:
Q  307 tcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaac 406  Q
    |||||||||||| || ||| |||||||||| |||||||||||| |||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||    
T  13909907 tcacaccaataacaa-cttgatgtgtggagtaagggataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaagccaaaagtagaaaac 13910002  T
Q  407 aacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    ||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  13910003 aacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 13910054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 303 - 407
Target Start/End: Original strand, 34979451 - 34979554
Alignment:
Q  303 gaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtaga 402  Q
    |||| ||||||||||| |||||| |||||||||| |||| ||||| | ||||||||||| |||||||||||||||||||||| || ||| ||||||||||    
T  34979451 gaaaacacaccaataacaaacttgatgtgtggagtaaggaataataaagcaaccaaaat-aaagtgtatggaacaattataaacataagtcaaaagtaga 34979549  T
Q  403 aaaca 407  Q
    |||||    
T  34979550 aaaca 34979554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 304 - 405
Target Start/End: Original strand, 19501860 - 19501958
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| |||||||||||||  | ||||||  |||||||||||||||||    
T  19501860 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaaacaaagtgtatgga--agttataaatacaagccaaaagtagaa 19501956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 283 - 403
Target Start/End: Original strand, 19504175 - 19504291
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| |||||||||||||  | ||||    
T  19504175 aattgttgtgaattcgatga-aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaaacaaagtgtatgga--agttat 19504270  T
Q  383 aatcacaagccaaaagtagaa 403  Q
    ||  |||||||||||||||||    
T  19504271 aaatacaagccaaaagtagaa 19504291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 286 - 409
Target Start/End: Original strand, 36558721 - 36558841
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  |||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||| |||    
T  36558721 tgttgtgaattcgatgaaaaatcacaccaataataa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagcgtatggaacaatta-aat 36558817  T
Q  386 cacaagcc-aaaagtagaaaacaac 409  Q
     || |||| ||||||||||||||||    
T  36558818 -acgagccaaaaagtagaaaacaac 36558841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 306 - 453
Target Start/End: Original strand, 24162084 - 24162232
Alignment:
Q  306 atcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaa 405  Q
    ||||||||||||| || ||| |||||||||| ||| |||||||| ||||||||||  |||||||||| |||||||| ||| |||||||||||||||||||    
T  24162084 atcacaccaataacaa-cttgatgtgtggagaaagagataatcaagcaaccaaaaa-aaagtgtatgaaacaatta-aat-acaagccaaaagtagaaaa 24162179  T
Q  406 caacagcaagagaa----aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||| || ||| ||    || |||||| | |||||||||||||||||||||||    
T  24162180 caacggcgagaaaaacacaaagaagagaagaacacaaaagaatttgttgaccc 24162232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 283 - 409
Target Start/End: Original strand, 36560978 - 36561101
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  ||||||||||||||| || ||| ||||||||||||||| ||||||| |||||||||| ||||| ||||||||||||||     
T  36560978 aattgttgtgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagcaaggaataatcaagcaaccaaaa-caaagcgtatggaacaatta- 36561074  T
Q  383 aatcacaagcc-aaaagtagaaaacaac 409  Q
    ||| || |||| ||||||||||||||||    
T  36561075 aat-acgagccaaaaagtagaaaacaac 36561101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 321 - 416
Target Start/End: Complemental strand, 42064878 - 42064786
Alignment:
Q  321 aacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaacaacagcaaga 416  Q
    ||||| |||||||||||||||||| |||| ||||| |||| |||||||||||||||||||| ||| |||||| |||||||||||||||| ||||||    
T  42064878 aacttgatgtgtggagcaagggatgatcaagcaactaaaa-caaagtgtatggaacaatta-aat-acaagcaaaaagtagaaaacaacggcaaga 42064786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 362 - 453
Target Start/End: Original strand, 44288987 - 44289076
Alignment:
Q  362 caaagtgtatggaacaattataatcacaagccaaaagtagaaaacaacagcaagaga-aaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||||||| ||||||||||| |||||||||| |||||||   |||||| ||||| ||| ||||||| |||||||||||||||||||||||    
T  44288987 caaagtgtatgaaacaattataaacacaagccaacagtagaa---aacagcgagagagaaatgaagagagaacacaaaagaatttgttgaccc 44289076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 286 - 375
Target Start/End: Complemental strand, 22874519 - 22874431
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaa 375  Q
    |||| |||||||| ||  |||||||||||||||||||||| |||||||||||||| |||| ||| ||||| |||| ||||||||||||||    
T  22874519 tgttgtgaattcgatgaaaaatcacaccaataataaacttgatgtgtggagcaagtgatagtcaagcaactaaaa-caaagtgtatggaa 22874431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 282 - 398
Target Start/End: Original strand, 11739417 - 11739532
Alignment:
Q  282 taattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaatta 381  Q
    |||||||| |||||||| ||  ||||||||||||||| |||||| |||||| |||||||||||| ||| | ||  |||| ||||||||||| ||||||||    
T  11739417 taattgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtagagcaagggatagtcaag-aaataaaaacaaagtgtatgaaacaatta 11739515  T
Q  382 taatcacaagccaaaag 398  Q
    |||  ||||| ||||||    
T  11739516 taaatacaagtcaaaag 11739532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 35217828 - 35217929
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||||||||| |||||| | |||||||||| ||||| |||||||| ||||| ||| ||||| |||||||||||    
T  35217828 aaatcacaccaataacaa-cttgatgtgtggagcaagagataattaagcaaccaaaa-caaagcgtatggaataatta-aat-acaagtcaaaagtagaa 35217923  T
Q  404 aacaac 409  Q
    ||||||    
T  35217924 aacaac 35217929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 409
Target Start/End: Original strand, 38414069 - 38414149
Alignment:
Q  328 tgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaacaac 409  Q
    ||||||||||| | |||||| ||||||| |||| |||||||||||||| |||||||| ||||||  ||||||||||||||||    
T  38414069 tgtgtggagcacgtgataattaggcaacgaaaa-caaagtgtatggaataattataaacacaaggtaaaagtagaaaacaac 38414149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 304 - 381
Target Start/End: Complemental strand, 42453873 - 42453798
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaatta 381  Q
    ||||||||||||||| || ||| |||||||||||||| |||||||| ||||||||||| ||| |||||||||||||||    
T  42453873 aaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagcaaccaaaat-aaaatgtatggaacaatta 42453798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 409
Target Start/End: Original strand, 20146454 - 20146576
Alignment:
Q  281 ataattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaatt 380  Q
    ||||||||| |||||||||||  ||||||||||||||| | |||| ||||||| || || |  |||||| |||||||| |||||  ||   |||||||||    
T  20146454 ataattgttgtgaattcgttgaaaaatcacaccaataaaatacttgatgtgtgaagtaaag--taatcaagcaaccaatatcaacatg---ggaacaatt 20146548  T
Q  381 ataatcacaagccaaaagtagaaaacaac 409  Q
    |||| |||||| |||||||||||||||||    
T  20146549 ataaacacaag-caaaagtagaaaacaac 20146576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 285 - 340
Target Start/End: Original strand, 42923292 - 42923347
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaag 340  Q
    ||||| |||||||||||||||| ||||||||||| |||||| ||||||||||||||    
T  42923292 ttgttgtgaattcgttgtgaaaacacaccaataacaaacttgatgtgtggagcaag 42923347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 304 - 405
Target Start/End: Complemental strand, 20592465 - 20592368
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| | || | |||||| |||||||  ||||||| |||||||||| |||||||||||||  | ||||||||||||| |||||||||||    
T  20592465 aaatcacaccaataaaatacgtgatgtgtagagcaagtaataatcaagcaaccaaaa-caaagtgtatgga--agttataatcacaag-caaaagtagaa 20592370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 309 - 452
Target Start/End: Complemental strand, 23871205 - 23871063
Alignment:
Q  309 acaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaa--caattataatcacaagccaaaagtagaaaac 406  Q
    |||||||||| ||| || ||||||||||||||| | ||| |   |||||||| ||||||||||| ||  ||||||||| |||||| ||||||||||||||    
T  23871205 acaccaataacaaatttgatgtgtggagcaaggaacaattaaataaccaaaa-caaagtgtatgaaaaacaattataaacacaaggcaaaagtagaaaac 23871107  T
Q  407 aacagcaagagaaaaggaagagataacacaaaagaatttgttgacc 452  Q
    | | | | |||||| | |||||| ||| ||||||||||||||||||    
T  23871106 agcggga-gagaaatg-aagagagaactcaaaagaatttgttgacc 23871063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 35215451 - 35215552
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||| | |||||||||| |||||  |||| || ||||| ||| ||||| |||||||||||    
T  35215451 aaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagcaaccaaaa-caaagcatatgaaataatta-aat-acaagtcaaaagtagaa 35215546  T
Q  404 aacaac 409  Q
    ||||||    
T  35215547 aacaac 35215552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 409
Target Start/End: Original strand, 45332019 - 45332140
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    ||||| |||||||| ||  ||||||||||||||| || ||| ||||||||| ||||||||||| | |||||||||| ||||| || || |||||||| ||    
T  45332019 ttgttgtgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggaacaagggataattaagcaaccaaaa-caaagcgtttgtaacaatta-aa 45332115  T
Q  385 tcacaagcc-aaaagtagaaaacaac 409  Q
    | ||||||| ||||||||||||||||    
T  45332116 t-acaagccaaaaagtagaaaacaac 45332140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 327 - 407
Target Start/End: Original strand, 31732669 - 31732746
Alignment:
Q  327 atgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaaca 407  Q
    ||||||| ||||||  ||||||| |||||||||| || |||||||||||   |||||||||||| ||||||||||||||||    
T  31732669 atgtgtgaagcaagttataatcaagcaaccaaaa-cagagtgtatggaag--ttataatcacaaaccaaaagtagaaaaca 31732746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 409
Target Start/End: Original strand, 11577991 - 11578076
Alignment:
Q  320 aaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaacaac 409  Q
    |||||| ||||||||| ||||  ||||||| ||||||||||| ||||| |||||||    | ||| ||||||||||||||||||||||||    
T  11577991 aaacttgatgtgtggaacaagtaataatcaagcaaccaaaat-aaagtatatggaag---tttaaacacaagccaaaagtagaaaacaac 11578076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 285 - 347
Target Start/End: Original strand, 37962790 - 37962852
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataat 347  Q
    ||||| |||||||| ||  |||||||| ||||||||||||| |||||||||| ||| ||||||    
T  37962790 ttgttgtgaattcgatgaaaaatcacatcaataataaacttgatgtgtggagtaagtgataat 37962852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 390
Target Start/End: Complemental strand, 8173734 - 8173635
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    ||||| |||||||||||  ||||||||||||||| | || |||||| |||||||| |  |||||| |||||||| ||||| |||   |||||||||||||    
T  8173734 ttgttgtgaattcgttgaaaaatcacaccaataaaatac-taatgtatggagcaaag--taatcaagcaaccaatatcaacgtg---ggaacaattataa 8173641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 37170605 - 37170660
Alignment:
Q  284 attgttttgaattcgttgtg-aaatcacaccaataataaacttaatgtgtggagcaa 339  Q
    |||||| ||||||||||||| ||||||||||||||| |||||| ||| |||||||||    
T  37170605 attgttgtgaattcgttgtgaaaatcacaccaataa-aaacttgatgcgtggagcaa 37170660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 285 - 339
Target Start/End: Complemental strand, 38191346 - 38191293
Alignment:
Q  285 ttgttttgaattcgttgtg-aaatcacaccaataataaacttaatgtgtggagcaa 339  Q
    ||||| ||||||||||||| ||||||||||||||  |||||||||| |||||||||    
T  38191346 ttgttgtgaattcgttgtgaaaatcacaccaata--aaacttaatgcgtggagcaa 38191293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 7e-53; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 28251429 - 28251576
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  28251429 aaatcacaccaataacaa-cttgatgtgtggagcaaggaataatcaggcaaccaaaa-caaagtgtatggaacaattataatcacaagccacaagtagaa 28251526  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||||| |||||||| ||||||| |||||||||||||||||||||||    
T  28251527 aacaacagcgagagaaaaagaagagagaacacaaaagaatttgttgaccc 28251576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 15073184 - 15073037
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  15073184 aaatcacaccaataacaaacttgatgtgtggagcaagggatagtcaagcaatcaaaa-caaagtgtatggaacaattataaacacaagccaaaagtagaa 15073086  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||||| |||||||| ||||||| ||||||||| |||||||||||||    
T  15073085 aacaacagcgagagaaaa-gaagagagaacacaaaataatttgttgaccc 15073037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 308 - 452
Target Start/End: Complemental strand, 41383132 - 41382989
Alignment:
Q  308 cacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaaca 407  Q
    ||||||||||| |||||| |||||||||||||| |||||||| |||| ||||| |||||| |||||||||||||||| ||||||||| ||||||||||||    
T  41383132 cacaccaataacaaacttgatgtgtggagcaagagataatcaagcaatcaaaa-caaagtttatggaacaattataaacacaagccagaagtagaaaaca 41383034  T
Q  408 acagcaagagaaaaggaagagataacacaaaagaatttgttgacc 452  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||    
T  41383033 acagcgagagaaaaggaagagagaacacaaaagaatttgttgacc 41382989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 14808233 - 14808087
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||||| ||||||||||| ||||||||||| ||||||||||||||||||    
T  14808233 aaatcacaccaataacaaacttgatgtgtggagcaacggataatcaagcaaccaaaa-caaagtgtatgaaacaattataaacacaagccaaaagtagaa 14808135  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||| |  |||||||| ||||||| |||||||||||||||||||||||    
T  14808134 aacaac-gagagagaaaa-gaagagagaacacaaaagaatttgttgaccc 14808087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 283 - 453
Target Start/End: Original strand, 14419032 - 14419199
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| || |||| ||||||||||| |||||| |||| ||||||||| |||||||||| |||||||| |||||||||||||||||||||    
T  14419032 aattgttgtgaattcgatgagaaaacacaccaataacaaacttgatgtatggagcaagtgataatcaggaaaccaaaa-caaagtgtatggaacaattat 14419130  T
Q  383 aatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    || |||||| ||||||||||||||| | |  |||||||| ||||||| |||||||||||||||||||||||    
T  14419131 aaacacaagtcaaaagtagaaaacagc-gagagagaaaa-gaagagagaacacaaaagaatttgttgaccc 14419199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 285 - 453
Target Start/End: Original strand, 35872300 - 35872462
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    ||||| |||||||| || |||| ||||||||||| |||||| ||||||| || |||||||||||| ||||||||||| ||||||||||||| ||||||||    
T  35872300 ttgttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgtgaagtaagggataatcaagcaaccaaaat-aaagtgtatggaaaaattataa 35872398  T
Q  385 tcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
     |||||||||||||||||||||||     |||||||| ||||||| |||||||||||||||||||||||    
T  35872399 acacaagccaaaagtagaaaacaa----gagagaaaa-gaagagagaacacaaaagaatttgttgaccc 35872462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 283 - 449
Target Start/End: Complemental strand, 15068475 - 15068311
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    |||||||  ||||||| ||  |||||||||||| || |||||| ||||||||| ||||||||| ||| |||||||||| ||||||||||||||||||||     
T  15068475 aattgttgcgaattcgatgaaaaatcacaccaacaacaaacttgatgtgtggaacaagggatagtcaagcaaccaaaa-caaagtgtatggaacaattac 15068377  T
Q  383 aatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttg 449  Q
    || ||||||||||||||||||||||||||| |||||||| |||| |  |||||||||||||||||||    
T  15068376 aaacacaagccaaaagtagaaaacaacagcgagagaaaa-gaagggtgaacacaaaagaatttgttg 15068311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 331 - 453
Target Start/End: Complemental strand, 41385192 - 41385070
Alignment:
Q  331 gtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagat 430  Q
    |||||||||||||||||||  |||||||||  |||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||| ||||||||     
T  41385192 gtggagcaagggataatcaaacaaccaaaacaaaagtgtatggaacaattataaacacaagccaaaagtataaaacaacagcgagagaaatggaagagag 41385093  T
Q  431 aacacaaaagaatttgttgaccc 453  Q
    |||| ||||||||||||||||||    
T  41385092 aacagaaaagaatttgttgaccc 41385070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 285 - 452
Target Start/End: Complemental strand, 25953011 - 25952848
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    ||||| |||||||| || |||| ||||||||||| |||||| |||||||||| ||| |||||||| ||||||||||| |||||||||| | |||||||||    
T  25953011 ttgttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagaaagtgataatcaagcaaccaaaat-aaagtgtatgaagcaattataa 25952913  T
Q  385 tcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgacc 452  Q
     ||||| ||||||||||||   ||| || ||||||||| |||||| ||||||||||||||||||||||    
T  25952912 acacaatccaaaagtagaa---aacggcgagagaaaagaaagagagaacacaaaagaatttgttgacc 25952848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 33541273 - 33541419
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| |||||||||| |||||||||||| |||| |||||| |||||||||||||||||||||| ||||||||||||||||||    
T  33541273 aaatcacaccaataacaaacttgatgtgtggagtaagggataatcaagcaatcaaaat-aaagtgtatggaacaattataaacacaagccaaaagtagaa 33541371  T
Q  404 aacaacagcaagaga-aaaggaagagataacacaaaagaatttgttgaccc 453  Q
       | |||| ||||| ||||||||||| |||||||||||| || |||||||    
T  33541372 ---atcagcgagagagaaaggaagagagaacacaaaagaaatttttgaccc 33541419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 285 - 453
Target Start/End: Original strand, 37214108 - 37214273
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    ||||| |||||| | || |||| ||||||||||| |||||| |||| ||||| ||| ||||| || |||||||||| |||||||||| ||||||||||||    
T  37214108 ttgttgtgaatttgatgagaaaacacaccaataacaaacttgatgtatggagtaagagataagcaagcaaccaaaa-caaagtgtatagaacaattataa 37214206  T
Q  385 tcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
     |||||||||||||||||||||||| |  |||| ||||||||||| |||||||||||||||||||||||    
T  37214207 acacaagccaaaagtagaaaacaac-gagagag-aaaggaagagaaaacacaaaagaatttgttgaccc 37214273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 30480366 - 30480512
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    |||| |||||||||| ||| || |||||||||| |||| ||||||| |||||||||| |||||||||||||||||||||||  |||||||||||||||||    
T  30480366 aaatgacaccaataacaaatttgatgtgtggagtaaggaataatcaagcaaccaaaa-caaagtgtatggaacaattataaatacaagccaaaagtagaa 30480464  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||| | |  |||||||| ||||||| |||||||||||||||||||||||    
T  30480465 aacagc-gagagagaaaa-gaagagagaacacaaaagaatttgttgaccc 30480512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 22684511 - 22684662
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||||    
T  22684511 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaggcaaccaaaatcaaagtttatggaacaatta-aat-acaagccaaaagtagaa 22684607  T
Q  404 aacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  22684608 aacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 22684662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 283 - 453
Target Start/End: Complemental strand, 18811205 - 18811033
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    |||||||  ||||||| ||  ||||||||||||||| || ||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||     
T  18811205 aattgttgcgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagcaaccaaaatcaaagtgtatggaacaatta- 18811108  T
Q  383 aatcacaagccaaaagtagaaaacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    ||| |||||||||||||||||||| ||||| || ||||   || |||||| | |||||||||||||||||||||||    
T  18811107 aat-acaagccaaaagtagaaaacgacagcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 18811033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 293 - 409
Target Start/End: Complemental strand, 36866023 - 36865907
Alignment:
Q  293 aattcgttgtgaaatc-acaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaag 391  Q
    |||||||||||||| | ||| |||||| |||||| |||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||| || |||    
T  36866023 aattcgttgtgaaaaccacatcaataacaaacttgatgtgtggagcaagtgataatcaagcaaccaaaa-caaagtgtatggaacaattataaacaaaag 36865925  T
Q  392 ccaaaagtagaaaacaac 409  Q
    ||||||||||||||||||    
T  36865924 ccaaaagtagaaaacaac 36865907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 285 - 452
Target Start/End: Complemental strand, 14477741 - 14477578
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    ||||| |||||||| ||  ||||||||||||||| |||||| |||||||||||||| ||||||||| ||||||||| ||||||||||| |||||| ||||    
T  14477741 ttgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagtgataatcagacaaccaaaa-caaagtgtatgaaacaatcataa 14477643  T
Q  385 tcacaagccaaaagtagaaaacaacagcaagaga-aaaggaagagataacacaaaagaatttgttgacc 452  Q
     ||||||||||||    |||| || ||| ||||| ||| ||||| | ||||||||||||||||||||||    
T  14477642 acacaagccaaaa----aaaaaaaaagcgagagagaaaagaagaaagaacacaaaagaatttgttgacc 14477578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 4424495 - 4424344
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || |||  |||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  4424495 aaatcacaccaataacaa-cttggtgtgtggagcaagggataatcaagcaaccaaaaacaaagtgtatggaacaatta-aat-acaagccaaaagtagaa 4424399  T
Q  404 aacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  4424398 aacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 4424344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 27827462 - 27827311
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||||||||||||| ||| |||||||||| |||||||||||||||||||| ||| ||||| |||||||||||    
T  27827462 aaatcacaccaataacaaacttgatgtgtggagcaagggatagtcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaagtcaaaagtagaa 27827366  T
Q  404 aacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  27827365 aacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 27827311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 285 - 409
Target Start/End: Complemental strand, 3874488 - 3874368
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    ||||| |||||||||||  ||||||||||||||| || ||| |||||||||||||| ||||| || |||||||||| |||||||||||||||||||| ||    
T  3874488 ttgttgtgaattcgttgaaaaatcacaccaataacaa-cttgatgtgtggagcaagagataaccaagcaaccaaaa-caaagtgtatggaacaatta-aa 3874392  T
Q  385 tcacaagccaaaagtagaaaacaac 409  Q
    | |||||||||||||||||||||||    
T  3874391 t-acaagccaaaagtagaaaacaac 3874368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 304 - 407
Target Start/End: Original strand, 13858352 - 13858452
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| |||||||||||||| |||||||| |||||||||| |||||||||||||  | |||||| ||||||||||||||||||    
T  13858352 aaatcacaccaataagaaacttgatgtgtggagcaagtgataatcaagcaaccaaaa-caaagtgtatgga--agttataaacacaagccaaaagtagaa 13858448  T
Q  404 aaca 407  Q
    ||||    
T  13858449 aaca 13858452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 27829773 - 27829622
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||||||||||||| ||| |||||||||| |||||||||||||||||||| ||| | ||| |||||||||||    
T  27829773 aaatcacaccaataacaaacttgatgtgtggagcaagggatagtcaagcaaccaaaa-caaagtgtatggaacaatta-aat-ataagtcaaaagtagaa 27829677  T
Q  404 aacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  27829676 aacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 27829622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 43530591 - 43530441
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||||||||| |||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  43530591 aaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaagccaaaagtagaa 43530496  T
Q  404 aacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||  ||||| ||||   || |||||| | |||||||||||||||||||||||    
T  43530495 aacaatggcaagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 43530441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 293 - 453
Target Start/End: Original strand, 27106754 - 27106906
Alignment:
Q  293 aattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagc 392  Q
    |||||| || |||| ||||||||||| |||||| ||||||||||||||||||| ||| |||||||||| ||||||||||||||   ||||||||||| |     
T  27106754 aattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaagggatagtcaagcaaccaaaa-caaagtgtatggaag--ttataatcaca-ga 27106849  T
Q  393 caaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||||||||||||||    ||||||| | |||||| ||||||||| |||||||||||||    
T  27106850 caaaagtagaaaacaacg---agagaaa-gaaagagaaaacacaaaataatttgttgaccc 27106906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 285 - 409
Target Start/End: Complemental strand, 27911568 - 27911447
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    ||||| |||||| ||||  ||||||||||||||| |||||| |||||||||||||| |||||| ||  || | ||| |||||||| ||||||||||||||    
T  27911568 ttgttgtgaatttgttgaaaaatcacaccaataaaaaacttgatgtgtggagcaagtgataattag--aaactaaaacaaagtgt-tggaacaattataa 27911472  T
Q  385 tcacaagccaaaagtagaaaacaac 409  Q
     ||||||||||||||||||||||||    
T  27911471 acacaagccaaaagtagaaaacaac 27911447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 285 - 409
Target Start/End: Complemental strand, 27957987 - 27957866
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    ||||| |||||| ||||  ||||||||||||||| |||||| |||||||||||||| |||||| ||  || | ||| |||||||| ||||||||||||||    
T  27957987 ttgttgtgaatttgttgaaaaatcacaccaataaaaaacttgatgtgtggagcaagtgataattag--aaactaaaacaaagtgt-tggaacaattataa 27957891  T
Q  385 tcacaagccaaaagtagaaaacaac 409  Q
     ||||||||||||||||||||||||    
T  27957890 acacaagccaaaagtagaaaacaac 27957866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 304 - 405
Target Start/End: Complemental strand, 32339786 - 32339688
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||    
T  32339786 aaatcacaccaataacaa-cttgatgtgtggggcaagggataatcaagcaaccaaaatcaaagtgtatggaacaatta-aat-acaagtcaaaagtagaa 32339690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 304 - 408
Target Start/End: Original strand, 5372044 - 5372148
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    |||||||| |||||| |||||| ||||||||||||| ||||| ||| ||||| ||||| ||| ||||||||||| |||||| | ||||||||||||||||    
T  5372044 aaatcacatcaataacaaacttgatgtgtggagcaatggatattcaagcaactaaaattaaaatgtatggaacagttataaactcaagccaaaagtagaa 5372143  T
Q  404 aacaa 408  Q
    |||||    
T  5372144 aacaa 5372148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 352 - 453
Target Start/End: Complemental strand, 181901 - 181805
Alignment:
Q  352 caaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgac 451  Q
    ||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||   | |||||||| ||||||| |||||||||||||||||||||    
T  181901 caaccaaaa-caaagtgtatgaaacaattataaacacaagccaaaagtagaaaacaa---cgagagaaaa-gaagagagaacacaaaagaatttgttgac 181807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 304 - 452
Target Start/End: Complemental strand, 18813358 - 18813208
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| || ||| ||||||| |||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  18813358 aaatcacaccaataacaa-cttgatatgtagagcaagagataatcaagcaaccaaaatcaaagtgtatggaacaatta-aat-acaagccaaaagtagaa 18813262  T
Q  404 aacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgacc 452  Q
    ||| || || || ||||   || |||||| | ||||||||||||||||||||||    
T  18813261 aacgacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgacc 18813208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 3883454 - 3883555
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    |||||||| |||||| || ||| ||||||||||||| ||||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  3883454 aaatcacatcaataacaa-cttgatgtgtggagcaaaggataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaagccaaaagtagaa 3883549  T
Q  404 aacaac 409  Q
    ||||||    
T  3883550 aacaac 3883555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 28283080 - 28283230
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| ||||||||||| || ||  ||||  |||||||||||||||||    
T  28283080 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatgaaaaaa--ataaatacaagccaaaagtagaa 28283175  T
Q  404 aacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  28283176 aacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 28283230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 283 - 436
Target Start/End: Original strand, 2467976 - 2468122
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  |||||||||||||||||||||| |||||||||||||| |||| ||| |||||||||| ||||||||| |||  | ||||    
T  2467976 aattgttgtgaattcgatga-aaatcacaccaataataaacttgatgtgtggagcaagtgatagtcaagcaaccaaaa-caaagtgtaggga--agttat 2468071  T
Q  383 aatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacaca 436  Q
    ||||||||  ||||| ||||||||||   | ||||||||| |||||| ||||||    
T  2468072 aatcacaaaacaaaattagaaaacaa---cgagagaaaagaaagagagaacaca 2468122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 15809694 - 15809544
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| ||||||||||| |||||||| ||| ||||| ||||| |||||    
T  15809694 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatgaaacaatta-aat-acaaggcaaaaatagaa 15809599  T
Q  404 aacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  15809598 aacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 15809544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 284 - 453
Target Start/End: Complemental strand, 15956445 - 15956284
Alignment:
Q  284 attgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattata 383  Q
    |||||| |||||||| ||  |||||||| |||||| |||||| ||||||||||||||||||| |||  ||||||||| |||||||||||  | | |||||    
T  15956445 attgttgtgaattcgatgaaaaatcacatcaataacaaacttgatgtgtggagcaagggatagtcaaacaaccaaaa-caaagtgtatg--aaagttata 15956349  T
Q  384 atcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||||  | ||||||||||||||   | |||||||| ||||||| || ||||||||||||||||||||    
T  15956348 atcacaa-acgaaagtagaaaacaa---cgagagaaaa-gaagagagaatacaaaagaatttgttgaccc 15956284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 286 - 453
Target Start/End: Original strand, 15185564 - 15185723
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  |||||||| |||||| |||||| |||||||||| |||||||| ||| |||||||||| ||||||||||||||   |||||||    
T  15185564 tgttgtgaattcggtgaaaaatcacatcaataacaaacttgatgtgtggagtaagggatagtcaagcaaccaaaa-caaagtgtatggaag--ttataat 15185660  T
Q  386 cacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    || || | |||||||||||||||   | |||| |||| |||||| |||| ||||||||||||||||||    
T  15185661 cataaac-aaaagtagaaaacaa---cgagag-aaagaaagagagaacaaaaaagaatttgttgaccc 15185723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 286 - 436
Target Start/End: Complemental strand, 21482798 - 21482653
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaacc-aaaatcaaagtgtatggaacaattataa 384  Q
    |||| |||||||| ||  |||||||||||||||||||||| |||||||||||||| |||||| | |||||| ||||  ||||||||||||  | ||||||    
T  21482798 tgttgtgaattcgatgaaaaatcacaccaataataaacttgatgtgtggagcaagtgataatgaagcaaccaaaaaataaagtgtatgga--agttataa 21482701  T
Q  385 tcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacaca 436  Q
    ||||||  |||||||||||   |||||| ||||||||| |||||| ||||||    
T  21482700 tcacaa-acaaaagtagaa---aacagcgagagaaaagaaagagagaacaca 21482653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 305 - 409
Target Start/End: Complemental strand, 44721318 - 44721218
Alignment:
Q  305 aatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaa 404  Q
    |||||||||||||| || ||| |||||||||| |||||||||||| |||||||||| |||||||||||||| ||||| ||| ||||| ||||||||||||    
T  44721318 aatcacaccaataacaa-cttgatgtgtggagtaagggataatcaagcaaccaaaa-caaagtgtatggaataatta-aat-acaagtcaaaagtagaaa 44721223  T
Q  405 acaac 409  Q
    |||||    
T  44721222 acaac 44721218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 409
Target Start/End: Complemental strand, 43082449 - 43082348
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||| | |||||||||| |||||||||||  | | ||||||  |||||||||||||||||    
T  43082449 aaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagcaaccaaaa-caaagtgtatg--aaagttataaatacaagccaaaagtagaa 43082354  T
Q  404 aacaac 409  Q
    ||||||    
T  43082353 aacaac 43082348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 416
Target Start/End: Complemental strand, 609213 - 609103
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaat-caaagtgtatggaacaattataatcacaagccaaaagtaga 402  Q
    ||||| ||||||||| || ||| ||| |||||||||| |||||||| ||||||||||  ||||||||||| |||||||| ||| ||||||||||||||||    
T  609213 aaatcgcaccaataacaa-cttgatgcgtggagcaagagataatcaagcaaccaaaaaacaaagtgtatgaaacaatta-aat-acaagccaaaagtaga 609117  T
Q  403 aaacaacagcaaga 416  Q
    ||||||| ||||||    
T  609116 aaacaacggcaaga 609103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 286 - 409
Target Start/End: Original strand, 24873039 - 24873160
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  ||||||||||||||| || ||| ||||||||||||||||||||| | |||||||||| |||||||||||  | | ||||||     
T  24873039 tgttgtgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagcaaccaaaaacaaagtgtatg--aaagttataaa 24873135  T
Q  386 cacaagccaaaa-gtagaaaacaac 409  Q
     ||||||||||| ||||||||||||    
T  24873136 tacaagccaaaaggtagaaaacaac 24873160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 409
Target Start/End: Complemental strand, 31162682 - 31162580
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| | |||| ||||||||||||||  ||||| | | |||||||| |||||||||||||  | ||||||  |||||||||||||||||    
T  31162682 aaatcacaccaataaaatacttgatgtgtggagcaagtaataattaagtaaccaaaa-caaagtgtatgga--agttataaatacaagccaaaagtagaa 31162586  T
Q  404 aacaac 409  Q
    ||||||    
T  31162585 aacaac 31162580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 283 - 436
Target Start/End: Complemental strand, 21480993 - 21480845
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaacc-aaaatcaaagtgtatggaacaatta 381  Q
    ||||||| |||||||| ||  |||| ||||||||||||||||| |||||||||| ||| || |||||  ||||| |||| |||||||||||||  | |||    
T  21480993 aattgttgtgaattcgatgaaaaataacaccaataataaacttgatgtgtggagtaagtgacaatcaaacaaccaaaaaacaaagtgtatgga--agtta 21480896  T
Q  382 taatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacaca 436  Q
    |||||||||  |||||| |||||||||   | ||||||||| |||||| ||||||    
T  21480895 taatcacaa-acaaaagaagaaaacaa---cgagagaaaagaaagagagaacaca 21480845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 374 - 452
Target Start/End: Complemental strand, 1225568 - 1225494
Alignment:
Q  374 aacaattataatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgacc 452  Q
    ||||||||||| |||||| |||||||||||||||   || ||||||||| |||||| ||||||||||||||||||||||    
T  1225568 aacaattataaacacaagtcaaaagtagaaaaca---gcgagagaaaag-aagagagaacacaaaagaatttgttgacc 1225494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 304 - 409
Target Start/End: Complemental strand, 43080078 - 43079977
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||| ||||||| | |||||||||| |||||||||||  | | ||||||  ||||| |||||||||||    
T  43080078 aaatcacaccaataacaa-cttgatgtgtggagcaatggataattaagcaaccaaaa-caaagtgtatg--aaagttataaatacaagtcaaaagtagaa 43079983  T
Q  404 aacaac 409  Q
    ||||||    
T  43079982 aacaac 43079977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 286 - 345
Target Start/End: Complemental strand, 183310 - 183251
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggata 345  Q
    |||| |||||||| || |||| ||||||||||| |||||| |||||||||||||||||||    
T  183310 tgttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaagggata 183251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 375
Target Start/End: Original strand, 3005503 - 3005572
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaa 375  Q
    ||||||||||||||| | |||| ||||||||||||||  |||||||  ||||||||  ||||||||||||||    
T  3005503 aaatcacaccaataaaatacttgatgtgtggagcaagtaataatcaaacaaccaaa--caaagtgtatggaa 3005572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 339
Target Start/End: Original strand, 2467897 - 2467932
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaa 339  Q
    |||||||||||||||||||||| |||||||||||||    
T  2467897 aaatcacaccaataataaacttgatgtgtggagcaa 2467932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 4e-51; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 9020380 - 9020231
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| |||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||  |||||||||||||||||    
T  9020380 aaatcacaccaataacaaacttgatgtgtggagcaagagataatcagacaaccaaaa-caaagtgtatggaacaattataaatacaagccaaaagtagaa 9020282  T
Q  404 aacaacagcaagagaaaa-ggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||||| |||||||| |||||||| |||||||||||||||||||||||    
T  9020281 aacaacagcgagagaaaagggaagagagaacacaaaagaatttgttgaccc 9020231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 292 - 453
Target Start/End: Original strand, 3233573 - 3233734
Alignment:
Q  292 gaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaag 391  Q
    ||||||| || |||| |||| |||||| ||| || |||||||||| ||| ||||||||||||||||||||||||||| ||| ||||||||||| |||||     
T  3233573 gaattcgatgagaaaacacatcaataacaaatttgatgtgtggagtaagtgataatcaggcaaccaaaatcaaagtgcatgaaacaattataaacacaaa 3233672  T
Q  392 ccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  3233673 ccaaaagtagaaaacaacagcgagagaaaaggaagagagaacacaaaagaatttgttgaccc 3233734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 285 - 453
Target Start/End: Original strand, 11982871 - 11983038
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    ||||| |||||||| ||  ||||||||||||||| || ||| ||||||||||||||| ||||||| |||||||||| |||||||||||||||||||| ||    
T  11982871 ttgttgtgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagcaaggaataatcaagcaaccaaaa-caaagtgtatggaacaattacaa 11982968  T
Q  385 tcacaagccaaaagtagaaaacaacagcaagag-aaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||||||||||||||||||||||||| |||| |||| ||||||| |||||||||||||||||||||||    
T  11982969 tcacaagccaaaagtagaaaacaacagcgagagaaaaaagaagagagaacacaaaagaatttgttgaccc 11983038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 283 - 453
Target Start/End: Original strand, 3631781 - 3631948
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  ||| ||||||||||| |||||| | |||||||||||| |||||| |||||||||||| |||||||||||||||||||||    
T  3631781 aattgttgtgaattcgatgaaaaaacacaccaataacaaacttgacgtgtggagcaagtgataattaggcaaccaaaa-caaagtgtatggaacaattat 3631879  T
Q  383 aatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    || |||||||||||||||||||||| | |  ||| ||||||||||||||||||||||||||||||||||||    
T  3631880 aaacacaagccaaaagtagaaaacatc-gagaga-aaaaggaagagataacacaaaagaatttgttgaccc 3631948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 292 - 453
Target Start/End: Original strand, 30728675 - 30728833
Alignment:
Q  292 gaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaag 391  Q
    ||||||||||  ||||||||||||||| |||||| ||||||||||||||||||| |||  ||||||||| |||||||||||||||||||||||  |||||    
T  30728675 gaattcgttgaaaaatcacaccaataacaaacttgatgtgtggagcaagggatagtcaaacaaccaaaa-caaagtgtatggaacaattataaatacaag 30728773  T
Q  392 ccaaaagtagaaaacaacagcaagaga-aaaggaagagataacacaaaagaatttgttgaccc 453  Q
     |||||||||||   |||||| ||||| |||||||||||||||||||||||||||||||||||    
T  30728774 tcaaaagtagaa---aacagcgagagagaaaggaagagataacacaaaagaatttgttgaccc 30728833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 286 - 453
Target Start/End: Original strand, 3629711 - 3629874
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| || |||| ||||||||||| |||||| ||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||||     
T  3629711 tgttgtgaattcgatgagaaaacacaccaataacaaacttgatgtgtggagcaaaggataatcaagcaaccaaaa-caaagtgtatggaacaattataaa 3629809  T
Q  386 cacaagcc-aaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||||| |||||||||||||||   | |||||||| ||||||| |||||||||||||||||||||||    
T  3629810 cacaagccaaaaagtagaaaacaa---cgagagaaaa-gaagagagaacacaaaagaatttgttgaccc 3629874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 26065437 - 26065286
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||| ||| |||||||||||||||| |||||||||| ||||||||||| |||||||||||||    
T  26065437 aaatcacaccaataacaa-cttgatgtgtggagcaagggatagtcaagcaaccaaaatcaaagcgtatggaacagttataatcacatgccaaaagtagaa 26065339  T
Q  404 aacaacagcaag-aga--aaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||||||||| |||  ||| ||| ||| ||||||||| |||||||||||||    
T  26065338 aacaacagcaagaagaacaaaagaatagagaacacaaaataatttgttgaccc 26065286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 26085406 - 26085255
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||| ||| |||||||||||||||| |||||||||| ||||||||||| |||||||||||||    
T  26085406 aaatcacaccaataacaa-cttgatgtgtggagcaagggatagtcaagcaaccaaaatcaaagcgtatggaacagttataatcacatgccaaaagtagaa 26085308  T
Q  404 aacaacagcaag-aga--aaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||||||||| |||  ||| ||| ||| ||||||||| |||||||||||||    
T  26085307 aacaacagcaagaagaacaaaagaatagagaacacaaaataatttgttgaccc 26085255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 283 - 448
Target Start/End: Original strand, 24338292 - 24338452
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  |||||||| |||||| |||||| |||||||||||||| |||| ||| |||||||||| |||||||||||||||||||||    
T  24338292 aattgttgtgaattcgatgaaaaatcacatcaataacaaacttgatgtgtggagcaagagatagtcaagcaaccaaaa-caaagtgtatggaacaattat 24338390  T
Q  383 aatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgtt 448  Q
    || ||||| |||||||||||||||||   | |||||||| |||||||||||||||||  |||||||    
T  24338391 aaacacaaaccaaaagtagaaaacaa---cgagagaaaa-gaagagataacacaaaaatatttgtt 24338452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 307 - 437
Target Start/End: Original strand, 15530027 - 15530156
Alignment:
Q  307 tcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaac 406  Q
    |||||||||||| |||||| |||||||||| |||| |||||||| ||| ||||||  |||||||||||||||||||||  ||||||||||||||||||||    
T  15530027 tcacaccaataacaaacttgatgtgtggagtaaggaataatcagacaatcaaaatttaagtgtatggaacaattataaatacaagccaaaagtagaaaac 15530126  T
Q  407 aacagcaagagaaaaggaagagataacacaa 437  Q
    |||||| |||||||| ||||||| |||||||    
T  15530127 aacagc-agagaaaaagaagagagaacacaa 15530156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 283 - 407
Target Start/End: Complemental strand, 3394840 - 3394716
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    |||||||  ||||||| || |||| ||||||||||| || ||| |||||||||| || ||||||||| |||||||||| |||||||||||||||||||||    
T  3394840 aattgttgcgaattcgatgagaaaacacaccaataaaaatcttgatgtgtggagaaatggataatcaagcaaccaaaaacaaagtgtatggaacaattat 3394741  T
Q  383 aatcacaagccaaaagtagaaaaca 407  Q
    || ||||||||||||||||||||||    
T  3394740 aaacacaagccaaaagtagaaaaca 3394716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 285 - 405
Target Start/End: Complemental strand, 15367499 - 15367380
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    ||||| |||||||| ||  ||||||||||||||| |||||| |||||||||||| | |||||||| |||||||||| |||||||||||||||||||||||    
T  15367499 ttgttgtgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcatgtgataatcaagcaaccaaaa-caaagtgtatggaacaattataa 15367401  T
Q  385 tcacaagccaaaagtagaaaa 405  Q
     ||||||||||||||||||||    
T  15367400 acacaagccaaaagtagaaaa 15367380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 304 - 410
Target Start/End: Complemental strand, 15346795 - 15346690
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||| |||| |||||||| |||||||||| |||||| |||||||||||||||| ||||||||||||||||||    
T  15346795 aaatcacaccaataacaaacttgatgtgtggaacaagtgataatcaagcaaccaaaa-caaagtatatggaacaattataaacacaagccaaaagtagaa 15346697  T
Q  404 aacaaca 410  Q
    |||||||    
T  15346696 aacaaca 15346690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 2628744 - 2628895
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| ||||||||||||||||||||||||  | ||||||  |||||||||||||||||    
T  2628744 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaatcaaagtgtatgga--agttataaatacaagccaaaagtagaa 2628840  T
Q  404 aacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  2628841 aacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 2628895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 14458625 - 14458727
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    |||||||||||||||||  ||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  14458625 aaatcacaccaataatag-cttgatgtgtggagtaatggataatcaggcaaccaaaatcaaagtgtatggaacaatta-aat-acaagccaaaagtagaa 14458721  T
Q  404 aacaac 409  Q
    ||||||    
T  14458722 aacaac 14458727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 306 - 453
Target Start/End: Original strand, 14507037 - 14507185
Alignment:
Q  306 atcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaaaa 405  Q
    ||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||||||    
T  14507037 atcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaagccaaaagtagaaaa 14507132  T
Q  406 caacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  14507133 caacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 14507185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 283 - 409
Target Start/End: Complemental strand, 33309332 - 33309210
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  ||||||||||||||| || ||| ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||     
T  33309332 aattgttgtgaattcgatga-aaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagcaaccaaaatcaaagcgtatggaacaatta- 33309236  T
Q  383 aatcacaagccaaaagtagaaaacaac 409  Q
    ||| |||||||||||||||||||||||    
T  33309235 aat-acaagccaaaagtagaaaacaac 33309210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 304 - 409
Target Start/End: Complemental strand, 33311581 - 33311479
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||| | |||||||||||||||| |||||||||||||| ||| |||||||||||||||||    
T  33311581 aaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagcaaccaaaatcaaagcgtatggaacaatta-aat-acaagccaaaagtagaa 33311485  T
Q  404 aacaac 409  Q
    ||||||    
T  33311484 aacaac 33311479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 303 - 405
Target Start/End: Original strand, 19704421 - 19704521
Alignment:
Q  303 gaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaacc-aaaatcaaagtgtatggaacaattataatcacaagccaaaagtag 401  Q
    |||||||||||||||| || ||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||| |||||||||||||||    
T  19704421 gaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaaatcaaagtgtatggaacaatta-aat-acaagccaaaagtag 19704517  T
Q  402 aaaa 405  Q
    ||||    
T  19704518 aaaa 19704521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 286 - 450
Target Start/End: Original strand, 1069563 - 1069724
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| || ||||  | |||||||| ||| |  |||| |||||||||||||| ||| |||| ||||| |||||||||||||||||||||||     
T  1069563 tgttgtgaattcgatgagaaaatataccaataacaaattcgatgtatggagcaagggatagtcaagcaatcaaaa-caaagtgtatggaacaattataaa 1069661  T
Q  386 cacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttga 450  Q
    ||||||| |||||||||||||| | |  |||||||| ||||||| |||| |||||||||||||||    
T  1069662 cacaagcaaaaagtagaaaacagc-gagagagaaaa-gaagagagaacataaaagaatttgttga 1069724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 304 - 452
Target Start/End: Complemental strand, 13057641 - 13057501
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||||| ||||||  ||| ||||||   | |||||||||||||||||  |||||||||||    
T  13057641 aaatcacaccaataacaaacttgatgtgtggagcaaaggataatcaagcaacc--aataaaagtg--ggcaacaattataatcacaa-acaaaagtagaa 13057547  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgacc 452  Q
       |||||  ||||||||| |||||| ||||||||||||||||||||||    
T  13057546 ---aacagatagagaaaagaaagagagaacacaaaagaatttgttgacc 13057501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 28241180 - 28241330
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||||||||| |||||||| |||| ||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  28241180 aaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagcaatcaaaa-caaagtgtatggaacaatta-aat-acaagccaaaagtagaa 28241275  T
Q  404 aacaacagc-aagagaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  28241276 aacaacggcgaaaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 28241330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 5273074 - 5273176
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||||||||||||||| |  | || |||  |||||||||||||||||    
T  5273074 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaatcaaagtgtatgta--atttttaaatacaagccaaaagtagaa 5273170  T
Q  404 aacaac 409  Q
    ||||||    
T  5273171 aacaac 5273176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 405
Target Start/End: Original strand, 4816089 - 4816186
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| ||||| |||||||||||    
T  4816089 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaagtcaaaagtagaa 4816184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 286 - 409
Target Start/End: Original strand, 12195354 - 12195474
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  ||||||||||||||| || ||| ||||||||||||||||||||| | |||||||||||||||| |||||  | | ||||||     
T  12195354 tgttgtgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagcaaccaaaatcaaagcgtatg--aaagttataaa 12195450  T
Q  386 cacaagccaaaagtagaaaacaac 409  Q
     |||||||||||||||||||||||    
T  12195451 tacaagccaaaagtagaaaacaac 12195474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 291 - 453
Target Start/End: Complemental strand, 14466786 - 14466629
Alignment:
Q  291 tgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaa 390  Q
    |||||||| ||  ||||||||||||||||||| || ||||||| |||||| |||| ||| |||||||||| |||| ||||||  | | ||||||||||||    
T  14466786 tgaattcgatgaaaaatcacaccaataataaatttgatgtgtgcagcaagtgatagtcaagcaaccaaaa-caaaatgtatg--aaagttataatcacaa 14466690  T
Q  391 gccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
      ||||||||||||||| |||| |||| |||| |||||| ||||||| |||||||| ||||||    
T  14466689 -acaaaagtagaaaacagcagcgagag-aaagaaagagagaacacaagagaatttgctgaccc 14466629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 283 - 409
Target Start/End: Original strand, 26068232 - 26068355
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  ||||||||||||||| || ||| ||||||||||||||||||||| | |||||||||| ||||| ||||||||||||||     
T  26068232 aattgttgtgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagcaaccaaaa-caaagcgtatggaacaatta- 26068328  T
Q  383 aatcacaagcc-aaaagtagaaaacaac 409  Q
    ||| ||||||| ||||||||||||||||    
T  26068329 aat-acaagccaaaaagtagaaaacaac 26068355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 285 - 407
Target Start/End: Complemental strand, 25480347 - 25480227
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    ||||| |||||||| ||  ||||||||||||||| | | || |||||| ||| |||||||| ||  ||||||||||| |||||||||| |||||||||||    
T  25480347 ttgttgtgaattcgatgaaaaatcacaccaataa-atatttgatgtgtagagtaagggatagtcgagcaaccaaaat-aaagtgtatgaaacaattataa 25480250  T
Q  385 tcacaagccaaaagtagaaaaca 407  Q
    ||||||| |||||||||||||||    
T  25480249 tcacaagtcaaaagtagaaaaca 25480227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 291 - 452
Target Start/End: Complemental strand, 22491074 - 22490921
Alignment:
Q  291 tgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaa 390  Q
    |||||||| ||  ||||||||||||||| |||||||||||||||||| | ||||||||| |||||||||| |||   ||  | ||||||||||| || |     
T  22491074 tgaattcgatgaaaaatcacaccaataacaaacttaatgtgtggagctaaggataatcaagcaaccaaaa-caa---gtgggtaacaattataaacatag 22490979  T
Q  391 gccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgacc 452  Q
    ||||||||||||||||||   | |||| |||| |||||| | ||||||||||||||||||||    
T  22490978 gccaaaagtagaaaacaa---cgagag-aaagaaagagagagcacaaaagaatttgttgacc 22490921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 286 - 409
Target Start/End: Original strand, 26065961 - 26066081
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  ||||||||||||||| || ||| ||||||||||||||||||||| | |||||||||| ||||| |||||||||||||| |||    
T  26065961 tgttgtgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagcaaccaaaa-caaagcgtatggaacaatta-aat 26066057  T
Q  386 cacaagcc-aaaagtagaaaacaac 409  Q
     ||||||| ||||||||||||||||    
T  26066058 -acaagccaaaaagtagaaaacaac 26066081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 286 - 409
Target Start/End: Original strand, 29754549 - 29754669
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||| ||  ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||| |||    
T  29754549 tgttgtgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagcgtatggaacaatta-aat 29754645  T
Q  386 cacaagcc-aaaagtagaaaacaac 409  Q
     || |||| ||||||||||||||||    
T  29754646 -acgagccaaaaagtagaaaacaac 29754669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 405
Target Start/End: Original strand, 20915215 - 20915312
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    |||||||||||||||||| ||| |||||||| ||||||| |||||| |||||||||| ||||||||||| || ||||| ||| |||||||||||||||||    
T  20915215 aaatcacaccaataataa-cttgatgtgtggggcaaggggtaatcaagcaaccaaaa-caaagtgtatgaaataatta-aat-acaagccaaaagtagaa 20915310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 1230107 - 1230258
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||| |||| |||||||| ||||||||||| |||||||||| |||||||| |||   |||||||||||| ||    
T  1230107 aaatcacaccaataacaa-cttgatgtgtggatcaagagataatcaagcaaccaaaat-aaagtgtatgaaacaatta-aatacaaagccaaaagtataa 1230203  T
Q  404 aacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  1230204 aacaacggcgagaagaacacaatgaagagaagaacacaaaagaatttgttgaccc 1230258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 282 - 405
Target Start/End: Original strand, 26932399 - 26932518
Alignment:
Q  282 taattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaatta 381  Q
    |||||||| |||||| | ||  ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| |||||||||||  | | |||    
T  26932399 taattgttgtgaatttgatgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatg--aaagtta 26932494  T
Q  382 taatcacaagccaaaagtagaaaa 405  Q
    |||  |||||||||| ||||||||    
T  26932495 taaatacaagccaaaggtagaaaa 26932518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 30967656 - 30967506
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||||||||| |||||||| | |||||||| ||||||| |||||| ||||| ||| ||||| |||||||||||    
T  30967656 aaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagtaaccaaaa-caaagtgcatggaataatta-aat-acaagtcaaaagtagaa 30967561  T
Q  404 aacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  30967560 aacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 30967506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 408
Target Start/End: Complemental strand, 22611121 - 22611023
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| | |||| |||||||||||||   ||||||| |||||||| |||||||||   ||||||||||||| |||||| |||||||||||    
T  22611121 aaatcacaccaataaaatacttgatgtgtggagcaa--aataatcaagcaaccaatatcaaagtg---ggaacaattataaacacaag-caaaagtagaa 22611028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 283 - 360
Target Start/End: Original strand, 8717192 - 8717268
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaa 360  Q
    ||||||| |||||||| ||  ||||||||||||||| || ||| ||||||||||||||||||||||| ||||||||||    
T  8717192 aattgttgtgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa 8717268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 15541008 - 15541149
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    |||||| |||||||| |||||| ||||||||||||||||||| ||| | |||||||| |||   ||  | |||| ||||||||||||  ||||| |||||    
T  15541008 aaatcaaaccaataacaaacttgatgtgtggagcaagggatagtcaagaaaccaaaa-caa---gttggtaacagttataatcacaa-acaaaattagaa 15541102  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||| |  ||||||||  |||||| |||||||||||||||||||||||    
T  15541103 aacaac-gagagagaaaa--aagagagaacacaaaagaatttgttgaccc 15541149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 304 - 372
Target Start/End: Complemental strand, 18322548 - 18322482
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatg 372  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| |||||||||||    
T  18322548 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatg 18322482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 6610379 - 6610478
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| | ||||||||||||||||||   ||||||| |||||||||| ||||||| ||  ||||||||||| || ||| |||||||| ||    
T  6610379 aaatcacaccaataaaatacttaatgtgtggagcaa--aataatcaagcaaccaaaa-caaagtggat--aacaattataaacataag-caaaagtataa 6610472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 453
Target Start/End: Complemental strand, 13040117 - 13040060
Alignment:
Q  393 caaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||||||||||||||    ||||||||| |||||| |||||||||||||||||||||||    
T  13040117 caaaagtagaaaacaacg---agagaaaagaaagagagaacacaaaagaatttgttgaccc 13040060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 283 - 405
Target Start/End: Complemental strand, 17012505 - 17012387
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  |||||||| |||||| | |||| |||||||||||||   ||||||| |||||||||| |||||||||| ||||  |||     
T  17012505 aattgttgtgaattcgatgaaaaatcacaacaataaaatacttgatgtgtggagcaaataataatcaagcaaccaaaa-caaagtgtat-gaac-gtta- 17012410  T
Q  383 aatcacaagccaaaagtagaaaa 405  Q
    || ||||||||||||||||||||    
T  17012409 aaacacaagccaaaagtagaaaa 17012387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 452
Target Start/End: Complemental strand, 32280445 - 32280303
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||| ||||| |||||| |||| ||||| ||| |||||||| |||||||| |   |||||  |  |||||||||||  |||||||||||||||||    
T  32280445 aaatcacacaaataacaaacttgatgtatggagtaagtgataatcaagcaaccaatac--aagtgggt--aacaattataaatacaagccaaaagtagaa 32280350  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgacc 452  Q
    || ||||   |||| ||||||||||| ||||||| ||||||| ||||||    
T  32280349 aataaca-tgagag-aaaggaagagagaacacaagagaattttttgacc 32280303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 407
Target Start/End: Original strand, 25465441 - 25465558
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  ||||||||||||||| | |||| |||| ||||||||   ||||||| |||||||| ||||| |||   |||||||||||    
T  25465441 aattgttgtgaattcgatga-aaatcacaccaataaaatacttgatgtatggagcaa--aataatcaagcaaccaatatcaacgtg---ggaacaattat 25465534  T
Q  383 aatcacaagccaaaagtagaaaaca 407  Q
    || | |||| |||||||||||||||    
T  25465535 aaactcaag-caaaagtagaaaaca 25465558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 453
Target Start/End: Original strand, 12186000 - 12186080
Alignment:
Q  369 tatggaacaattataatcacaagccaaaagtagaaaacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||||||||||||| ||||||  ||||||||||   |||||| |||| |||| |||||| ||||||||| |||||||| ||||    
T  12186000 tatggaacaattataaacacaaggaaaaagtagaa---aacagcgagag-aaagaaagagagaacacaaaataatttgtttaccc 12186080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 28078065 - 28078160
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| | |||| |||||||||||||   ||||||| |||||||| ||||| |||   |||| |||||||| |||||| |||||||||||    
T  28078065 aaatcacaccaataaaatacttgatgtgtggagcaa-aaataatcaagcaaccaatatcaacgtg---ggaagaattataaacacaag-caaaagtagaa 28078159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 304 - 408
Target Start/End: Original strand, 30034464 - 30034562
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||| |||||||||| ||||||| |||||||||  ||||||||||| ||   ||||||  |||||| ||||||||||    
T  30034464 aaatcacaccaataacaa-cttgatgtatggagcaagg-ataatcaagcaaccaaa--caaagtgtatgaaag--ttataaatacaagctaaaagtagaa 30034557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 339
Target Start/End: Original strand, 5165698 - 5165747
Alignment:
Q  291 tgaattcgttgtgaaat-cacaccaataataaacttaatgtgtggagcaa 339  Q
    ||||||||||||||||  |||||||||||||||||| ||| |||||||||    
T  5165698 tgaattcgttgtgaaaaacacaccaataataaacttgatgcgtggagcaa 5165747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 339
Target Start/End: Complemental strand, 3918837 - 3918789
Alignment:
Q  291 tgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaa 339  Q
    |||||||||||  ||||||||||||||| | ||||||| ||||||||||    
T  3918837 tgaattcgttgaaaaatcacaccaataaaatacttaatttgtggagcaa 3918789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 343
Target Start/End: Complemental strand, 10584415 - 10584355
Alignment:
Q  284 attgttttgaattcgttgtgaaatc-acaccaataataaacttaatgtgtggagcaaggga 343  Q
    |||||| |||||||| || |||| | |||||||||| |||||| |||||||||||||||||    
T  10584415 attgttgtgaattcgatgagaaaaccacaccaataacaaacttgatgtgtggagcaaggga 10584355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 36021 - 35873
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    |||| |||||||||| |||||| ||||||||||||||||||| ||| |||||||||| ||||||||||| ||||||||||| |||||||||||| | |||    
T  36021 aaattacaccaataacaaacttgatgtgtggagcaagggatagtcaagcaaccaaaaacaaagtgtatgaaacaattataaacacaagccaaaactcgaa 35922  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    ||||||||| |||||||| ||||||| ||||||||| |||||||||||||    
T  35921 aacaacagcgagagaaaa-gaagagagaacacaaaataatttgttgaccc 35873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 304 - 448
Target Start/End: Complemental strand, 85655 - 85515
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || |||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  85655 aaatcacaccaataacaatcttaatgtgtggagcaagagataatcaaacaaccaaaatcaaagtgtatggaacaattataaacacaagtcaaaagtagaa 85556  T
Q  404 aacaacagcaagagaaaaggaagagataacacaaaagaatttgtt 448  Q
    |||||   | |||||||| ||||||| ||||||||||||||||||    
T  85555 aacaa---cgagagaaaa-gaagagagaacacaaaagaatttgtt 85515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 306 - 453
Target Start/End: Original strand, 11335 - 11482
Alignment:
Q  306 atcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatc-aaagtgtatggaacaattataatcacaagccaaaagtagaaa 404  Q
    ||||||||||||| || ||| |||||||||| |||| ||||| | ||||| ||||   ||||||||||||||||||||||||||||||||||||||||||    
T  11335 atcacaccaataacaa-cttgatgtgtggagtaaggaataattaagcaacgaaaaaataaagtgtatggaacaattataatcacaagccaaaagtagaaa 11433  T
Q  405 acaacagcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||||| |||||||| ||||||| |||||||||||||||||||||||    
T  11434 acaacagcgagagaaaaagaagagagaacacaaaagaatttgttgaccc 11482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 81; Significance: 6e-38; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 283 - 453
Target Start/End: Complemental strand, 50460 - 50293
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    |||||||  ||||||| ||  ||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||    
T  50460 aattgttgcgaattcgatgaaaaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatgaaacaattat 50362  T
Q  383 aatcacaagccaaaagtagaaaacaac-agcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    || |||||||||||||||||||||||| ||  |||||||| ||||||| |  ||| ||||||||||||||||    
T  50361 aaacacaagccaaaagtagaaaacaactag--agagaaaaagaagaga-agaacacaagaatttgttgaccc 50293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 304 - 453
Target Start/End: Complemental strand, 52438 - 52292
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||| ||||||||||||||||||    
T  52438 aaatcacaccaataacaaacttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatgaaacaattataaacacaagccaaaagtagaa 52340  T
Q  404 aacaac-agcaagagaaaaggaagagataacacaaaagaatttgttgaccc 453  Q
    |||||| ||  |||||||| ||||||| |  ||| ||||||||||||||||    
T  52339 aacaactag--agagaaaaagaagaga-agaacacaagaatttgttgaccc 52292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 292 - 453
Target Start/End: Original strand, 183488 - 183650
Alignment:
Q  292 gaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaag 391  Q
    ||||||| || |||||||||||||||| || ||| |||||||||||||| |||||||| |||||| ||| |||| ||||||||||||||| ||| |||||    
T  183488 gaattcgatgagaaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagcaaccgaaa-caaaatgtatggaacaatta-aat-acaag 183583  T
Q  392 ccaaaagtagaaaacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||||||||||||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  183584 ccaaaagtagaaaacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 183650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 78; Significance: 4e-36; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 14248 - 14391
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  14248 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatggaacaattataaacacaagccaaaagtagaa 14345  T
Q  404 aacaacagcaagaga-aaaggaagagataacacaaaagaatttgttgaccc 453  Q
       |||||| ||||| ||||||||||| |||||  ||||||||||||||||    
T  14346 ---aacagcgagagagaaaggaagagagaacac--aagaatttgttgaccc 14391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 286 - 405
Target Start/End: Complemental strand, 473 - 357
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| ||||||||||| |||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| |||    
T  473 tgttgtgaattcgttgagaaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaatcaaagcgtatggaacaatta-aat 376  T
Q  386 cacaagccaaaagtagaaaa 405  Q
     |||||||||||||||||||    
T  375 -acaagccaaaagtagaaaa 357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0339 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0339
Description:

Target: scaffold0339; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 286 - 453
Target Start/End: Complemental strand, 4437 - 4274
Alignment:
Q  286 tgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataat 385  Q
    |||| |||||||||||||||| |||| |||||| |||||| |||||||||| |||||||||||| |||| ||||||  |||||||| ||| ||||||||     
T  4437 tgttgtgaattcgttgtgaaaacacatcaataacaaacttgatgtgtggagtaagggataatcaagcaatcaaaat-gaagtgtatagaataattataaa 4339  T
Q  386 cacaagccaaaagtagaaaacaacagcaagagaaaaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    ||||||||||||||||||   |||||| |||| |||  ||||| | |||||||||||||||||||||||    
T  4338 cacaagccaaaagtagaa---aacagcgagag-aaatcaagagaagaacacaaaagaatttgttgaccc 4274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 69150 - 69301
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||| ||||||||  | ||||||  |||||||||||||||||    
T  69150 aaatcacaccaataacaaacttgatgtgtggagcaagggataatcaggcaaccaaaa-caaaatgtatgga--agttataaatacaagccaaaagtagaa 69246  T
Q  404 aacaacagcaag-agaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  69247 aacaacggcgagaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 69301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 304 - 453
Target Start/End: Original strand, 41342 - 41492
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||||||||| |||||||| |||| ||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  41342 aaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagcaatcaaaa-caaagtgtatggaacaatta-aat-acaagccaaaagtagaa 41437  T
Q  404 aacaacagc-aagagaa---aaggaagag-ataacacaaaagaatttgttgaccc 453  Q
    |||||| || || ||||   || |||||| | |||||||||||||||||||||||    
T  41438 aacaacggcgaaaagaacacaaagaagagaagaacacaaaagaatttgttgaccc 41492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 285 - 409
Target Start/End: Complemental strand, 6647 - 6527
Alignment:
Q  285 ttgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataa 384  Q
    ||||| |||||||| ||  ||||||||||||||| || ||| ||||||||||||||||||||| | |||||||||||||||| ||||||   ||| ||||    
T  6647 ttgttgtgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagcaaccaaaatcaaagcgtatgg---aataataa 6552  T
Q  385 tcacaagccaaaagtagaaaacaac 409  Q
      |||||||||||||||||||||||    
T  6551 atacaagccaaaagtagaaaacaac 6527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 304 - 409
Target Start/End: Complemental strand, 29599 - 29498
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| |||| ||||| |||||||||||||||||||| ||| | |||||||||||||||    
T  29599 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaatcaaaa-caaagtgtatggaacaatta-aat-aaaagccaaaagtagaa 29504  T
Q  404 aacaac 409  Q
    ||||||    
T  29503 aacaac 29498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 291 - 409
Target Start/End: Original strand, 1297 - 1411
Alignment:
Q  291 tgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaa 390  Q
    |||||||| ||  ||||||||||||||| || ||| |||||||||| ||  |||||||| |||||||||| |||||||||||||||||||| ||| ||||    
T  1297 tgaattcgatgaaaaatcacaccaataacaa-cttgatgtgtggagaaaaagataatcaagcaaccaaaa-caaagtgtatggaacaatta-aat-acaa 1392  T
Q  391 gccaaaagtagaaaacaac 409  Q
    |||||||||||||||||||    
T  1393 gccaaaagtagaaaacaac 1411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 405
Target Start/End: Original strand, 1311 - 1408
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| |||||||||||||| |||||||| |||||||||| ||||||||||| |||||||| ||| |||||||||||||||||    
T  1311 aaatcacaccaataacaa-cttgatgtgtggagcaagagataatcaagcaaccaaaa-caaagtgtatgtaacaatta-aat-acaagccaaaagtagaa 1406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 283 - 409
Target Start/End: Original strand, 12712 - 12834
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| |||||||| ||  |||| |||||||||| || ||| ||||||||||||||||||||||| |||||||||| |||||||||||  | | ||||    
T  12712 aattgttgtgaattcgatgaaaaatgacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaaa-caaagtgtatg--aaagttat 12807  T
Q  383 aatcacaagccaaaagtagaaaacaac 409  Q
    ||  |||||||||||||||| ||||||    
T  12808 aaatacaagccaaaagtagacaacaac 12834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 405
Target Start/End: Complemental strand, 24821 - 24723
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| || ||| ||||||||||||||||||||| | |||||||||||||||| |||||||| || || ||| || ||||||||||||||    
T  24821 aaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagcaaccaaaatcaaagcgtatggaataa-taaaat-acgagccaaaagtagaa 24725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 283 - 405
Target Start/End: Complemental strand, 22567 - 22448
Alignment:
Q  283 aattgttttgaattcgttgtgaaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattat 382  Q
    ||||||| ||||||||  |  ||||||||||||||| || ||| ||||||||||||||||||||| | |||||||||||||||| | |||||| || ||     
T  22567 aattgttgtgaattcgacgaaaaatcacaccaataacaa-cttgatgtgtggagcaagggataattaagcaaccaaaatcaaagcgcatggaataa-taa 22470  T
Q  383 aatcacaagccaaaagtagaaaa 405  Q
    ||| || ||||||||||||||||    
T  22469 aat-acgagccaaaagtagaaaa 22448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0891 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0891
Description:

Target: scaffold0891; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 408
Target Start/End: Original strand, 4536 - 4636
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| ||  || |||||||||| |||||||||||| ||||| ||| |||||| |||||||||||||| ||| |||||||||||||||||    
T  4536 aaatcacaccaataacaat-ttgatgtgtggagtaagggataatcaagcaac-aaagtcaaagcgtatggaacaatta-aat-acaagccaaaagtagaa 4631  T
Q  404 aacaa 408  Q
    |||||    
T  4632 aacaa 4636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 304 - 408
Target Start/End: Original strand, 1510 - 1609
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatggaacaattataatcacaagccaaaagtagaa 403  Q
    ||||||||||||||| | | || ||||||||||||||  ||||||| |||||||||  ||||||||||||||   |||||| ||||||||||||||||||    
T  1510 aaatcacaccaataa-atatttgatgtgtggagcaagtaataatcaagcaaccaaa--caaagtgtatggaag--ttataaacacaagccaaaagtagaa 1604  T

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Target: scaffold0250 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 304 - 372
Target Start/End: Complemental strand, 3308 - 3243
Alignment:
Q  304 aaatcacaccaataataaacttaatgtgtggagcaagggataatcaggcaaccaaaatcaaagtgtatg 372  Q
    ||||||||||||||| || ||| ||||||||||||||||||||||| |||||||||  |||||||||||    
T  3308 aaatcacaccaataacaa-cttgatgtgtggagcaagggataatcaagcaaccaaa--caaagtgtatg 3243  T

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