View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8961_high_7 (Length: 457)

Name: NF8961_high_7
Description: NF8961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8961_high_7
NF8961_high_7
[»] chr4 (54 HSPs)
chr4 (215-441)||(26865803-26866030)
chr4 (91-163)||(18135188-18135260)
chr4 (91-163)||(49122398-49122470)
chr4 (94-216)||(31862127-31862247)
chr4 (86-217)||(56576235-56576365)
chr4 (94-217)||(4201459-4201580)
chr4 (94-216)||(3436208-3436328)
chr4 (94-216)||(53599927-53600047)
chr4 (81-217)||(19527335-19527470)
chr4 (94-169)||(353995-354069)
chr4 (94-217)||(52677286-52677407)
chr4 (94-216)||(12252083-12252203)
chr4 (94-207)||(42513167-42513278)
chr4 (86-169)||(44014045-44014128)
chr4 (94-169)||(26620492-26620566)
chr4 (86-217)||(32239382-32239512)
chr4 (94-165)||(35381556-35381626)
chr4 (94-217)||(38617448-38617569)
chr4 (94-216)||(13629334-13629454)
chr4 (94-216)||(29295337-29295457)
chr4 (81-169)||(48782229-48782317)
chr4 (94-216)||(50623397-50623517)
chr4 (91-216)||(33755220-33755343)
chr4 (115-216)||(44069014-44069113)
chr4 (94-169)||(6195053-6195127)
chr4 (106-169)||(21044900-21044962)
chr4 (106-169)||(27492388-27492450)
chr4 (94-169)||(38542417-38542491)
chr4 (94-169)||(38617845-38617919)
chr4 (81-216)||(42099691-42099825)
chr4 (94-169)||(46871950-46872024)
chr4 (106-164)||(26906542-26906599)
chr4 (94-217)||(44217688-44217809)
chr4 (94-217)||(47428511-47428632)
chr4 (114-216)||(9834247-9834347)
chr4 (94-216)||(22828542-22828662)
chr4 (100-165)||(23623642-23623706)
chr4 (94-143)||(31369855-31369904)
chr4 (94-163)||(55147202-55147270)
chr4 (101-165)||(30939188-30939251)
chr4 (94-218)||(5374491-5374613)
chr4 (106-165)||(8735422-8735480)
chr4 (94-165)||(16464923-16464993)
chr4 (94-165)||(19093294-19093364)
chr4 (106-169)||(34464306-34464368)
chr4 (94-169)||(35232439-35232513)
chr4 (94-169)||(40411972-40412046)
chr4 (81-163)||(52057578-52057660)
chr4 (94-156)||(23237669-23237730)
chr4 (94-163)||(42629352-42629420)
chr4 (94-143)||(45725590-45725639)
chr4 (86-169)||(36750206-36750289)
chr4 (101-161)||(54029135-54029194)
chr4 (81-143)||(54231592-54231656)
[»] chr8 (47 HSPs)
chr8 (81-216)||(2888594-2888728)
chr8 (81-217)||(8554142-8554277)
chr8 (86-169)||(17074713-17074796)
chr8 (86-169)||(17573474-17573557)
chr8 (81-213)||(18842513-18842643)
chr8 (88-165)||(39615585-39615662)
chr8 (94-216)||(43553383-43553503)
chr8 (94-216)||(14263524-14263644)
chr8 (94-216)||(23429889-23430009)
chr8 (94-168)||(43642129-43642202)
chr8 (81-169)||(35052079-35052167)
chr8 (94-169)||(33935200-33935274)
chr8 (94-169)||(38482932-38483006)
chr8 (94-169)||(40603991-40604065)
chr8 (94-217)||(9954628-9954749)
chr8 (94-216)||(34046831-34046951)
chr8 (86-169)||(1245338-1245421)
chr8 (106-169)||(3720706-3720768)
chr8 (94-169)||(35051872-35051946)
chr8 (86-168)||(45281508-45281590)
chr8 (86-163)||(167608-167685)
chr8 (100-165)||(8672332-8672396)
chr8 (94-143)||(17313128-17313177)
chr8 (100-169)||(17718529-17718597)
chr8 (115-217)||(27518868-27518968)
chr8 (94-216)||(34981809-34981929)
chr8 (81-169)||(40228321-40228409)
chr8 (106-166)||(2456262-2456321)
chr8 (100-164)||(31028685-31028748)
chr8 (107-216)||(39303669-39303776)
chr8 (94-169)||(2335459-2335533)
chr8 (94-169)||(4057314-4057388)
chr8 (94-169)||(6750641-6750715)
chr8 (94-169)||(6757432-6757506)
chr8 (100-216)||(8730973-8731087)
chr8 (106-169)||(10180396-10180458)
chr8 (106-165)||(12342766-12342824)
chr8 (94-169)||(13173955-13174029)
chr8 (101-168)||(14228468-14228534)
chr8 (81-143)||(21651872-21651935)
chr8 (101-217)||(23848703-23848817)
chr8 (81-216)||(25703703-25703837)
chr8 (114-169)||(35296070-35296124)
chr8 (106-168)||(40521396-40521457)
chr8 (106-143)||(13935228-13935265)
chr8 (180-217)||(15596323-15596360)
chr8 (107-143)||(35028657-35028693)
[»] chr3 (46 HSPs)
chr3 (81-216)||(41425609-41425743)
chr3 (81-216)||(40319060-40319194)
chr3 (90-168)||(29458861-29458939)
chr3 (86-216)||(36370965-36371096)
chr3 (81-168)||(33074410-33074497)
chr3 (81-169)||(42671545-42671633)
chr3 (94-216)||(7328435-7328555)
chr3 (94-216)||(53745427-53745547)
chr3 (81-216)||(17102734-17102868)
chr3 (94-169)||(51219230-51219304)
chr3 (81-217)||(43554369-43554504)
chr3 (81-143)||(22099956-22100019)
chr3 (81-216)||(48214047-48214181)
chr3 (94-169)||(54106289-54106363)
chr3 (81-215)||(48151966-48152099)
chr3 (94-217)||(54898232-54898353)
chr3 (94-216)||(790530-790650)
chr3 (94-216)||(13167996-13168117)
chr3 (100-169)||(33874698-33874766)
chr3 (94-216)||(44544315-44544435)
chr3 (94-207)||(33491285-33491396)
chr3 (81-216)||(20105172-20105306)
chr3 (106-169)||(20848877-20848939)
chr3 (81-143)||(22173972-22174035)
chr3 (106-218)||(41351352-41351463)
chr3 (100-163)||(43775542-43775604)
chr3 (81-164)||(45145160-45145242)
chr3 (106-169)||(47104313-47104375)
chr3 (107-162)||(49123556-49123610)
chr3 (81-216)||(52627369-52627504)
chr3 (94-217)||(36234346-36234467)
chr3 (94-207)||(13158585-13158698)
chr3 (94-165)||(3376454-3376524)
chr3 (94-169)||(27483932-27484006)
chr3 (94-169)||(28885704-28885778)
chr3 (94-169)||(47070003-47070077)
chr3 (94-169)||(51244650-51244724)
chr3 (106-169)||(52175746-52175808)
chr3 (94-165)||(54334329-54334399)
chr3 (82-143)||(55141609-55141671)
chr3 (124-169)||(2154215-2154259)
chr3 (94-143)||(25983808-25983857)
chr3 (94-143)||(29651719-29651768)
chr3 (106-216)||(52173726-52173835)
chr3 (101-165)||(27028168-27028231)
chr3 (101-169)||(27039759-27039826)
[»] chr5 (42 HSPs)
chr5 (81-217)||(3686355-3686489)
chr5 (86-216)||(30368243-30368372)
chr5 (86-165)||(17872418-17872497)
chr5 (86-165)||(17869431-17869510)
chr5 (94-216)||(42911512-42911632)
chr5 (81-216)||(18465663-18465797)
chr5 (100-216)||(38502943-38503057)
chr5 (94-216)||(4694726-4694846)
chr5 (100-218)||(28447127-28447243)
chr5 (81-216)||(26854217-26854351)
chr5 (94-206)||(28024396-28024506)
chr5 (81-216)||(38297739-38297874)
chr5 (94-216)||(4985312-4985431)
chr5 (94-217)||(21606395-21606516)
chr5 (94-216)||(4175617-4175737)
chr5 (100-169)||(39893952-39894020)
chr5 (94-169)||(1297875-1297949)
chr5 (94-169)||(5144135-5144209)
chr5 (81-216)||(7579791-7579925)
chr5 (81-216)||(18794745-18794879)
chr5 (106-169)||(38017426-38017488)
chr5 (94-169)||(39073052-39073126)
chr5 (94-168)||(8229940-8230013)
chr5 (107-169)||(38363199-38363260)
chr5 (106-216)||(9127500-9127608)
chr5 (81-169)||(12664866-12664954)
chr5 (81-165)||(19831663-19831747)
chr5 (100-164)||(32388999-32389062)
chr5 (94-169)||(1088070-1088144)
chr5 (94-169)||(4688935-4689009)
chr5 (94-169)||(9076079-9076153)
chr5 (94-169)||(12784579-12784653)
chr5 (94-165)||(18020905-18020975)
chr5 (94-165)||(34261324-34261394)
chr5 (94-165)||(38910286-38910356)
chr5 (106-168)||(4962335-4962396)
chr5 (107-169)||(12870049-12870110)
chr5 (86-143)||(31802821-31802879)
chr5 (81-165)||(14793913-14793997)
chr5 (100-169)||(38160300-38160368)
chr5 (81-169)||(40209091-40209179)
chr5 (101-165)||(5119190-5119253)
[»] chr6 (24 HSPs)
chr6 (81-169)||(17601267-17601355)
chr6 (81-217)||(26470850-26470985)
chr6 (106-216)||(3849045-3849153)
chr6 (94-216)||(17193138-17193258)
chr6 (94-216)||(22400705-22400825)
chr6 (94-163)||(11431298-11431366)
chr6 (100-169)||(33260726-33260794)
chr6 (124-217)||(8176415-8176506)
chr6 (106-169)||(11676766-11676827)
chr6 (86-165)||(22784800-22784879)
chr6 (94-169)||(8992574-8992648)
chr6 (94-169)||(9017021-9017095)
chr6 (94-164)||(17124124-17124193)
chr6 (100-169)||(1252191-1252259)
chr6 (100-169)||(17251403-17251471)
chr6 (107-168)||(24663406-24663466)
chr6 (94-216)||(27313480-27313600)
chr6 (94-162)||(7632178-7632245)
chr6 (101-165)||(24948273-24948336)
chr6 (94-165)||(3621620-3621690)
chr6 (101-216)||(23777276-23777389)
chr6 (94-164)||(31854632-31854701)
chr6 (100-169)||(24356201-24356269)
chr6 (180-216)||(7632256-7632292)
[»] chr1 (37 HSPs)
chr1 (81-169)||(48265159-48265247)
chr1 (82-169)||(31487903-31487990)
chr1 (81-216)||(48508113-48508247)
chr1 (94-216)||(31570774-31570894)
chr1 (95-213)||(19093251-19093367)
chr1 (94-216)||(35531432-35531552)
chr1 (94-217)||(21927833-21927954)
chr1 (81-216)||(13507750-13507884)
chr1 (81-216)||(13514938-13515072)
chr1 (94-165)||(31588876-31588946)
chr1 (106-217)||(10675881-10675990)
chr1 (94-217)||(30686390-30686511)
chr1 (81-207)||(45226700-45226825)
chr1 (94-216)||(8464586-8464706)
chr1 (94-216)||(37296862-37296982)
chr1 (94-207)||(35255475-35255586)
chr1 (100-216)||(5597803-5597917)
chr1 (94-169)||(32994606-32994680)
chr1 (94-169)||(38597617-38597691)
chr1 (94-169)||(38648483-38648557)
chr1 (94-169)||(44818480-44818554)
chr1 (94-165)||(49908319-49908389)
chr1 (94-168)||(12124671-12124744)
chr1 (94-168)||(18033963-18034036)
chr1 (107-169)||(37437203-37437264)
chr1 (94-217)||(44182739-44182860)
chr1 (106-217)||(51972430-51972539)
chr1 (94-163)||(19455536-19455604)
chr1 (94-169)||(9361999-9362073)
chr1 (94-169)||(15660613-15660687)
chr1 (106-165)||(17013452-17013510)
chr1 (94-169)||(35483916-35483990)
chr1 (94-165)||(36318383-36318453)
chr1 (94-169)||(37735276-37735350)
chr1 (94-169)||(43500532-43500606)
chr1 (86-143)||(32348029-32348087)
chr1 (91-164)||(13566707-13566779)
[»] chr7 (30 HSPs)
chr7 (81-216)||(28608575-28608708)
chr7 (86-169)||(19327920-19328003)
chr7 (94-217)||(1553494-1553615)
chr7 (94-217)||(18470286-18470407)
chr7 (94-167)||(26632323-26632395)
chr7 (94-169)||(33173833-33173907)
chr7 (86-216)||(33099967-33100096)
chr7 (86-216)||(35112409-35112538)
chr7 (94-216)||(17896666-17896786)
chr7 (94-216)||(31430539-31430659)
chr7 (107-208)||(41891257-41891357)
chr7 (94-169)||(20035074-20035148)
chr7 (94-169)||(20045485-20045559)
chr7 (100-169)||(17354175-17354243)
chr7 (81-169)||(32528457-32528545)
chr7 (100-169)||(42842015-42842083)
chr7 (94-216)||(44480285-44480405)
chr7 (94-165)||(7312647-7312717)
chr7 (81-216)||(26723904-26724038)
chr7 (94-169)||(33921917-33921991)
chr7 (94-165)||(36922269-36922339)
chr7 (94-169)||(8264973-8265051)
chr7 (94-163)||(6799155-6799223)
chr7 (115-168)||(29497698-29497750)
chr7 (100-141)||(31815217-31815258)
chr7 (100-165)||(35746793-35746857)
chr7 (180-216)||(3310196-3310232)
chr7 (82-169)||(3837888-3837975)
chr7 (101-169)||(10227282-10227349)
chr7 (106-162)||(31399086-31399141)
[»] chr2 (29 HSPs)
chr2 (81-162)||(31011846-31011927)
chr2 (81-216)||(34357158-34357292)
chr2 (94-216)||(10812179-10812299)
chr2 (94-169)||(15677434-15677508)
chr2 (81-216)||(41885605-41885739)
chr2 (94-216)||(11222459-11222579)
chr2 (94-216)||(13753935-13754055)
chr2 (94-216)||(26342560-26342680)
chr2 (100-169)||(43077318-43077386)
chr2 (94-165)||(4654749-4654819)
chr2 (94-217)||(14295900-14296021)
chr2 (100-169)||(32854929-32854997)
chr2 (94-216)||(34399182-34399302)
chr2 (94-169)||(479116-479190)
chr2 (94-169)||(3363610-3363684)
chr2 (94-169)||(15893723-15893797)
chr2 (106-169)||(25187282-25187344)
chr2 (94-165)||(36404985-36405055)
chr2 (94-168)||(28145715-28145788)
chr2 (81-169)||(2012887-2012975)
chr2 (81-169)||(6013501-6013589)
chr2 (81-217)||(14541310-14541445)
chr2 (106-169)||(4883629-4883691)
chr2 (94-165)||(11560190-11560260)
chr2 (94-169)||(13215419-13215493)
chr2 (94-156)||(14284167-14284228)
chr2 (94-143)||(9706838-9706887)
chr2 (100-169)||(10263782-10263850)
chr2 (86-169)||(38186186-38186269)
[»] scaffold0024 (1 HSPs)
scaffold0024 (81-169)||(49173-49261)
[»] scaffold1254 (1 HSPs)
scaffold1254 (94-143)||(1084-1133)
[»] scaffold0419 (1 HSPs)
scaffold0419 (94-143)||(6496-6545)
[»] scaffold0002 (2 HSPs)
scaffold0002 (94-216)||(138871-138992)
scaffold0002 (94-207)||(148290-148403)
[»] scaffold1213 (1 HSPs)
scaffold1213 (94-169)||(108-182)
[»] scaffold0831 (1 HSPs)
scaffold0831 (94-165)||(2837-2907)
[»] scaffold0343 (1 HSPs)
scaffold0343 (100-169)||(7450-7518)
[»] scaffold0018 (1 HSPs)
scaffold0018 (94-216)||(184268-184388)
[»] scaffold0040 (1 HSPs)
scaffold0040 (94-169)||(69126-69200)
[»] scaffold0019 (1 HSPs)
scaffold0019 (94-169)||(72088-72162)
[»] scaffold0007 (1 HSPs)
scaffold0007 (106-169)||(77114-77176)
[»] scaffold0009 (1 HSPs)
scaffold0009 (100-169)||(147275-147343)


Alignment Details
Target: chr4 (Bit Score: 185; Significance: 1e-100; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 215 - 441
Target Start/End: Complemental strand, 26866030 - 26865803
Alignment:
Q  215 taagataccaataatttggtagtcattttcgctgctctttcaattgataatagatacattgtatatatagtgaactaatttcataaccgaaattctaatt 314  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26866030 taagataccaagaatttggtagtcattttcgctgctctttcaattgataatagatacattgtatatatagtgaactaatttcataaccgaaaatctaatt 26865931  T
Q  315 ttttggatcaatcgtcaggtggtacgt-nnnnnnnnnctccctagactaactcttgatctaggaatattattattctggataaaagaagatgaaatcaca 413  Q
    |||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26865930 ttttggatcaatcgtcaggtggtacgtaaaaaaaaaactccctagactaactcttgatctaggaatattattattctggataaaagaagatgaaatcaca 26865831  T
Q  414 acaaaattttaacaatgaaatggtgatg 441  Q
    ||||||||||||||||||||||||||||    
T  26865830 acaaaattttaacaatgaaatggtgatg 26865803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 91 - 163
Target Start/End: Original strand, 18135188 - 18135260
Alignment:
Q  91 aataataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaat 163  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18135188 aataataaataagggtaatattagtaaaataacatttaatgttgcattgaactatgtaaagtgacacttaaat 18135260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 91 - 163
Target Start/End: Original strand, 49122398 - 49122470
Alignment:
Q  91 aataataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaat 163  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  49122398 aataataaataagggtaatattagtaaaataacatttaatgttgcattgaactatgtaaagtgacacttaaat 49122470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 31862127 - 31862247
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||||||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||       || ||||||||||||||    
T  31862127 aataaataaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaacaaaaatttt-ctccaaaagagaca 31862224  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||||||||    
T  31862225 cttaaaaaggaacggagggagta 31862247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 86 - 217
Target Start/End: Original strand, 56576235 - 56576365
Alignment:
Q  86 tccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctcca 184  Q
    |||||||||| ||| ||||| ||||||| |||||| ||||||||||||||||||||||| || ||||||||| ||||||||||||       || |||||    
T  56576235 tccacaataaataactaaggataatattggtaaaacaatatttaatgttgcattgaactttg-aaagtgacagttaaataggaacaaaattttt-ctcca 56576332  T
Q  185 aaagagacacttacaaaggaacgaagggagtaa 217  Q
    |||| |||||||| ||||||||| |||||||||    
T  56576333 aaagtgacacttaaaaaggaacggagggagtaa 56576365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 4201459 - 4201580
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| |||||||||||||| || ||||||||||| |||||||| || ||||||||| ||||||||||||       || || |||||||||||    
T  4201459 aataattaaggataatattagtaaaacaacatttaatgttgaattgaactttg-aaagtgacagttaaataggaacaaaaaattt-cttcaaaagagaca 4201556  T
Q  194 cttacaaaggaacgaagggagtaa 217  Q
    |||| ||||||||| |||||||||    
T  4201557 cttaaaaaggaacggagggagtaa 4201580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 3436208 - 3436328
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||       || ||||||||| ||||    
T  3436208 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaacaaaattttt-ctccaaaagtgaca 3436305  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||||||||    
T  3436306 cttaaaaaggaacggagggagta 3436328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 53599927 - 53600047
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||| ||||||||||||||||||||||| || ||||||||| ||||||||||||       || ||||||||  ||||    
T  53599927 aataactaaggataatattggtaaaacaatatttaatgttgcattgaactttg-aaagtgacagttaaataggaacaaaattttt-ctccaaaaatgaca 53600024  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||||||||    
T  53600025 cttaaaaaggaacggagggagta 53600047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 81 - 217
Target Start/End: Original strand, 19527335 - 19527470
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttc 179  Q
    |||| |||||||||| ||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||       ||     
T  19527335 ctctctccacaataaataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaacaaaaatttt- 19527432  T
Q  180 ctccaaaagagacacttacaaaggaacgaagggagtaa 217  Q
    ||||||||| |||||||| |||| |||| |||||||||    
T  19527433 ctccaaaagtgacacttaaaaagaaacggagggagtaa 19527470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 354069 - 353995
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||| ||||||||| |||||||||||||||||||| || ||||||||| ||||||||||||    
T  354069 aataactaaggataatattggtaaaataacatttaatgttgcattgaactttg-aaagtgacaattaaataggaac 353995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 52677286 - 52677407
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||       || ||| ||||| ||||    
T  52677286 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaacaaaaaattt-ctctaaaagtgaca 52677383  T
Q  194 cttacaaaggaacgaagggagtaa 217  Q
    |||| ||||||||| |||||||||    
T  52677384 cttaaaaaggaacggagggagtaa 52677407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 12252203 - 12252083
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||       || || |||||| ||||    
T  12252203 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaacaaaaatttt-cttcaaaagtgaca 12252106  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||||||||    
T  12252105 cttaaaaaggaacggagggagta 12252083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 42513167 - 42513278
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || |||||||||||||||||| |||       || ||||||||| ||||    
T  42513167 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacacttaaatagtaacaaaattttt-ctccaaaagtgaca 42513264  T
Q  194 cttacaaaggaacg 207  Q
    |||| |||||||||    
T  42513265 cttaaaaaggaacg 42513278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 86 - 169
Target Start/End: Original strand, 44014045 - 44014128
Alignment:
Q  86 tccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||||||||| ||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||    
T  44014045 tccacaataaataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaac 44014128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 26620492 - 26620566
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||    
T  26620492 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaac 26620566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 217
Target Start/End: Complemental strand, 32239512 - 32239382
Alignment:
Q  86 tccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctcca 184  Q
    |||||||||| ||| ||||| ||||||| |||||| ||||||||||||||||||||||| |  ||||||||| ||||||| ||||       || |||||    
T  32239512 tccacaataaataactaaggataatattggtaaaacaatatttaatgttgcattgaact-ttaaaagtgacagttaaatatgaacaaaattttt-ctcca 32239415  T
Q  185 aaagagacacttacaaaggaacgaagggagtaa 217  Q
    |||| |||| ||| ||||||||| |||||||||    
T  32239414 aaagtgacatttaaaaaggaacggagggagtaa 32239382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 35381556 - 35381626
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    ||||| ||||| |||||||||||||| || |||||||||||||||||||| || ||||||||| ||||||||    
T  35381556 aataactaaggataatattagtaaaacaacatttaatgttgcattgaactttg-aaagtgacaattaaatag 35381626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 38617448 - 38617569
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| |||||  |||||| |||||| || |||||||||||||||||||| || ||| ||||| ||||||||||||       || ||||||||| ||||    
T  38617448 aataactaaggacaatattggtaaaacaacatttaatgttgcattgaactttg-aaaatgacagttaaataggaacaaaatattt-ctccaaaagtgaca 38617545  T
Q  194 cttacaaaggaacgaagggagtaa 217  Q
    |||| ||||||||| |||||||||    
T  38617546 cttaaaaaggaacggagggagtaa 38617569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 13629334 - 13629454
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| |||||  |||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||       || || |||||| ||||    
T  13629334 aataactaaggacaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaacaaaaaattt-ctacaaaagtgaca 13629431  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||||||||    
T  13629432 cttaaaaaggaacggagggagta 13629454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 29295457 - 29295337
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||| ||| ||||||||||||       || ||||||||| ||||    
T  29295457 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtcacagttaaataggaacaaaattttt-ctccaaaagtgaca 29295360  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||| | ||||||||    
T  29295359 cttaaaaaggaaaggagggagta 29295337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 81 - 169
Target Start/End: Complemental strand, 48782317 - 48782229
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||| |||||||||| ||| |||||  |||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||    
T  48782317 ctctctccacaataaataactaaggacaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaac 48782229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 50623517 - 50623397
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| |||||||| |||       || |||| |||| ||||    
T  50623517 aataattaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacaattaaatagaaacaaatttttt-ctcctaaagtgaca 50623420  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||||||||    
T  50623419 cttaaaaaggaacggagggagta 50623397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 91 - 216
Target Start/End: Original strand, 33755220 - 33755343
Alignment:
Q  91 aataataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagag 190  Q
    |||||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||| | |||        || ||| ||||| |    
T  33755220 aataataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaaga-gaaataaaaattttctctaaaagtg 33755317  T
Q  191 acacttacaaaggaacgaagggagta 216  Q
    ||||||| ||||||||||||||||||    
T  33755318 acacttaaaaaggaacgaagggagta 33755343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 216
Target Start/End: Complemental strand, 44069113 - 44069014
Alignment:
Q  115 taaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagacacttacaaaggaacgaagggag 214  Q
    ||||| || |||||||||||||||||||| || ||||||||||||||||||||||       || || |||||| |||||||| ||||||||| ||||||    
T  44069113 taaaacaacatttaatgttgcattgaactttg-aaagtgacacttaaataggaacaaaattttt-ctacaaaagtgacacttaaaaaggaacggagggag 44069016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 6195127 - 6195053
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || || |||||| ||||||||||||    
T  6195127 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aatgtgacagttaaataggaac 6195053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 21044900 - 21044962
Alignment:
Q  106 taatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||    
T  21044900 taatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaac 21044962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 27492450 - 27492388
Alignment:
Q  106 taatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||    
T  27492450 taatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaac 27492388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 38542417 - 38542491
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||| |||||| |||||||||||||||| |||| | || ||||||||| ||||||||||||    
T  38542417 aataactaaggataatattggtaaaacaatatttaatgttgcactgaattttg-aaagtgacatttaaataggaac 38542491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 38617919 - 38617845
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||| |||||| |||||||  ||||| |||||||||||||||||| |||| || ||||||||| ||||||||||||    
T  38617919 aatatataaggataatattgataaaacaatatttaatgttgcattaaactttg-aaagtgacaattaaataggaac 38617845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 42099825 - 42099691
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttc 179  Q
    |||||||| |||||| ||| ||||| |||||||  ||||| |  |||||||||||||||||||| || ||||||| | |||||||| |||       |||    
T  42099825 ctctttccgcaataaataattaagggtaatattgataaaacaccatttaatgttgcattgaactttg-aaagtgatagttaaatagaaacaaaaaaattc 42099727  T
Q  180 ctccaaaagagacacttacaaaggaacgaagggagta 216  Q
     ||||||||||||||||| ||||||||| ||||||||    
T  42099726 -tccaaaagagacacttaaaaaggaacggagggagta 42099691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 46872024 - 46871950
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| |||||  |||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||    
T  46872024 aataactaaggacaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaac 46871950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 26906542 - 26906599
Alignment:
Q  106 taatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaata 164  Q
    |||||||||||||| ||||||||||||||||||||||  || ||||||||| |||||||    
T  26906542 taatattagtaaaacaatatttaatgttgcattgaaccttg-aaagtgacagttaaata 26906599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 44217809 - 44217688
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| |  ||||||||| |||||||| |||       || ||||||||| ||||    
T  44217809 aataactaaggataatattggtaaaacaacatttaatgttgcattgaact-tcgaaagtgacagttaaatagaaacaaaaaattt-ctccaaaagtgaca 44217712  T
Q  194 cttacaaaggaacgaagggagtaa 217  Q
    |||| ||||||||| || ||||||    
T  44217711 cttaaaaaggaacggagagagtaa 44217688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 47428632 - 47428511
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| |||||  |||||| |||||| || |||||||||||||||||||| || |||| |||| ||||||||||||       || ||||||||| ||||    
T  47428632 aataactaaggacaatattggtaaaacaacatttaatgttgcattgaactttg-aaagcgacagttaaataggaacaaaattttt-ctccaaaagtgaca 47428535  T
Q  194 cttacaaaggaacgaagggagtaa 217  Q
    |||| ||||||| | |||||||||    
T  47428534 cttataaaggaatggagggagtaa 47428511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 114 - 216
Target Start/End: Complemental strand, 9834347 - 9834247
Alignment:
Q  114 gtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagacacttacaaaggaacgaaggga 213  Q
    ||||||||| |||||||||||||||||||| |  ||||||||| ||||||||||||       || ||||||||| |||||||| ||||||||  |||||    
T  9834347 gtaaaataagatttaatgttgcattgaact-ttaaaagtgacagttaaataggaacaaaaaattt-ctccaaaagtgacacttaaaaaggaactgaggga 9834250  T
Q  214 gta 216  Q
    |||    
T  9834249 gta 9834247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 22828542 - 22828662
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| |||||||  ||||| |  || ||||||||||||||||| || ||||||||| |||||||| |||       ||| |||||||||||||    
T  22828542 aataattaagggtaatattgataaaacatcatgtaatgttgcattgaactttg-aaagtgacagttaaatagaaacaaaaaaattc-tccaaaagagaca 22828639  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||||||||    
T  22828640 cttaaaaaggaacggagggagta 22828662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 23623642 - 23623706
Alignment:
Q  100 taaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||    
T  23623642 taaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaatag 23623706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 31369904 - 31369855
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaact 143  Q
    ||||| ||||| ||||||| |||||| |||||||||||||||||||||||    
T  31369904 aataagtaaggataatattggtaaaacaatatttaatgttgcattgaact 31369855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 55147202 - 55147270
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaat 163  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||    
T  55147202 aataagtaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaat 55147270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 30939251 - 30939188
Alignment:
Q  101 aaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    |||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||    
T  30939251 aagggtaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaatag 30939188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 218
Target Start/End: Original strand, 5374491 - 5374613
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||| || ||||||||||||||||| || || ||||||||| ||||| | ||||       || ||||||||| ||||    
T  5374491 aataactaaggataatattggtaaaacaacatttaatgttgcattgagctttg-aaagtgacagttaaacaagaacaaaaaattt-ctccaaaagtgaca 5374588  T
Q  194 cttacaaaggaacgaagggagtaag 218  Q
    |||| |||| |||| ||||||||||    
T  5374589 cttaaaaagaaacggagggagtaag 5374613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 8735480 - 8735422
Alignment:
Q  106 taatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    ||||||| |||||| |||||||||| |||||||||||| || ||||||||| ||||||||    
T  8735480 taatattggtaaaacaatatttaatattgcattgaactttg-aaagtgacaattaaatag 8735422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 16464923 - 16464993
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    ||||| |||||  |||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||    
T  16464923 aataactaaggacaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaatag 16464993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 19093294 - 19093364
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||  ||||||||    
T  19093294 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacggttaaatag 19093364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 34464368 - 34464306
Alignment:
Q  106 taatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||||||  ||||| || ||||||| ||||||||||||||| ||||||||| ||||||||||||    
T  34464368 taatattgataaaacaacatttaatattgcattgaactatg-aaagtgacagttaaataggaac 34464306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 35232439 - 35232513
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || || |||| | ||||||||||||    
T  35232439 aataagtaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aacgtgatagttaaataggaac 35232513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 40412046 - 40411972
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| |||||||  ||||| ||||||||||||| ||||||||| || ||| ||||| ||||||||||||    
T  40412046 aataattaaggataatattgataaaacaatatttaatgttacattgaactttg-aaaatgacagttaaataggaac 40411972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 163
Target Start/End: Original strand, 52057578 - 52057660
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaat 163  Q
    |||| |||||||||| ||| ||||| |||||||  |||||||| ||||||| |||||||||||| || ||||||||| ||||||    
T  52057578 ctctctccacaataaataactaaggataatattgataaaataacatttaattttgcattgaactttg-aaagtgacagttaaat 52057660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 23237730 - 23237669
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgaca 156  Q
    ||||| |||||  |||||| ||||||||| |||||||||||||||||||| || |||||||||    
T  23237730 aataattaaggacaatattggtaaaataacatttaatgttgcattgaactttg-aaagtgaca 23237669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 42629420 - 42629352
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaat 163  Q
    ||||| ||||| |||||||  ||||| || |||||||||||||||||||| || ||||||||| ||||||    
T  42629420 aataattaagggtaatattgataaaacaaaatttaatgttgcattgaactttg-aaagtgacaattaaat 42629352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 45725639 - 45725590
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaact 143  Q
    ||||| ||||| |||||||  |||||||||||||||| ||||||||||||    
T  45725639 aataattaaggataatattgataaaataatatttaatattgcattgaact 45725590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 169
Target Start/End: Complemental strand, 36750289 - 36750206
Alignment:
Q  86 tccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||||||||| ||| |||| |||||||| |||||| || ||||||| ||| ||||||||  | ||||||||| ||||||||||||    
T  36750289 tccacaataaataagtaagattaatattggtaaaacaacatttaatattgtattgaacttcg-aaagtgacagttaaataggaac 36750206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 54029194 - 54029135
Alignment:
Q  101 aaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaa 161  Q
    ||||||||||   ||||||||| |||||||||||||||||||| || ||||||||| ||||    
T  54029194 aaggttaataaaggtaaaataacatttaatgttgcattgaactttg-aaagtgacagttaa 54029135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 143
Target Start/End: Complemental strand, 54231656 - 54231592
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaa-tgttgcattgaact 143  Q
    ||||||||| ||||| ||| ||||| ||||||||||||||||| |||||| ||||| ||||||||    
T  54231656 ctctttccataataaataactaaggataatattagtaaaataacatttaattgttgaattgaact 54231592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 4e-39; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 2888594 - 2888728
Alignment:
Q  81 ctctttccacaataataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcc 180  Q
    |||| ||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||       || |    
T  2888594 ctctctccacaataataaataagggtaatattagtaaagtaacatttaatgttgcattgaactatgtaaagtgacacttaaataggaacaaaaaaatt-c 2888692  T
Q  181 tccaaaagagacacttacaaaggaacgaagggagta 216  Q
    ||||||||||||||||| ||||||||| ||||||||    
T  2888693 tccaaaagagacacttaaaaaggaacggagggagta 2888728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 81 - 217
Target Start/End: Original strand, 8554142 - 8554277
Alignment:
Q  81 ctctttccacaataataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcc 180  Q
    |||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||       || |    
T  8554142 ctctctccacaataataaataaggataatattagtaaaataacatttaatgttgcattgaactatgtaaagtgacacttaaataagaacaaaaaaatt-c 8554240  T
Q  181 tccaaaagagacacttacaaaggaacgaagggagtaa 217  Q
    | ||| ||||||||||| ||||||||| |||||||||    
T  8554241 tacaagagagacacttaaaaaggaacggagggagtaa 8554277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 86 - 169
Target Start/End: Original strand, 17074713 - 17074796
Alignment:
Q  86 tccacaataataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||    
T  17074713 tccacaataataaataaggataatattagtaaaattacatttaatgttgcattgaactatgtaaagtgacatttaaataggaac 17074796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 86 - 169
Target Start/End: Complemental strand, 17573557 - 17573474
Alignment:
Q  86 tccacaataataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||||    
T  17573557 tccacaataataaataaggataatattagtaaaattacatttaatgttgcattgaactatgtaaagtgacatttaaataggaac 17573474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 81 - 213
Target Start/End: Complemental strand, 18842643 - 18842513
Alignment:
Q  81 ctctttccacaataataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcc 180  Q
    |||| ||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||       || |    
T  18842643 ctctctccacaataataaataagggtaatattagtaaaataacatttaatattgcattgaacta-gtaaagtgacacttaaataggaacaaaaaaatt-c 18842546  T
Q  181 tccaaaagagacacttacaaaggaacgaaggga 213  Q
    |||||||| |||||||| ||||||||| |||||    
T  18842545 tccaaaagtgacacttaaaaaggaacggaggga 18842513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 88 - 165
Target Start/End: Original strand, 39615585 - 39615662
Alignment:
Q  88 cacaataataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  39615585 cacaataataaataaggataatattagtaaaataacatttaatgttgcattgaacgatgtaaagtgacacttaaatag 39615662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 43553383 - 43553503
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||||||||||||||||||||||||||| |  ||| ||||| ||||||||||||       || ||||||||||||||    
T  43553383 aataagtaaggataatattggtaaaataatatttaatgttgcattgaact-tcgaaaatgacagttaaataggaacaaaaaattt-ctccaaaagagaca 43553480  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||||||||    
T  43553481 cttaaaaaggaacggagggagta 43553503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 14263644 - 14263524
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| | |||||||||| ||||||||||||       || ||||||||| ||||    
T  14263644 aataactaaggataatattggtaaaacaacatttaatgttgcattgaact-tttaaagtgacagttaaataggaacaaaaatttt-ctccaaaagtgaca 14263547  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||||||||    
T  14263546 cttaaaaaggaacggagggagta 14263524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 23430009 - 23429889
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||       || ||||||||| ||||    
T  23430009 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaacaaaaatttt-ctccaaaagtgaca 23429912  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||||||||    
T  23429911 cttaaaaaggaacggagggagta 23429889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 94 - 168
Target Start/End: Original strand, 43642129 - 43642202
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaa 168  Q
    ||||| ||||| ||||||| ||||||||| |||||||||||||||||||| || ||||||||| |||||||||||    
T  43642129 aataactaaggataatattggtaaaataacatttaatgttgcattgaactttg-aaagtgacagttaaataggaa 43642202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 81 - 169
Target Start/End: Complemental strand, 35052167 - 35052079
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||| |||||||||| ||||||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||| ||||    
T  35052167 ctctctccacaataaataaataaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaatatgaac 35052079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 33935200 - 33935274
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||| |||||| |||||||||||||||||| |||| || ||||||||| ||||||||||||    
T  33935200 aataactaaggataatattggtaaaacaatatttaatgttgcattaaactttg-aaagtgacagttaaataggaac 33935274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 38482932 - 38483006
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||    
T  38482932 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaac 38483006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 40603991 - 40604065
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||| ||||||||| |||||||||||||||||||| || ||| ||||| ||||||||||||    
T  40603991 aataattaaggataatattggtaaaataacatttaatgttgcattgaactttg-aaaatgacagttaaataggaac 40604065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 9954749 - 9954628
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| |||||  |||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||       || ||||||||| ||||    
T  9954749 aataactaaggacaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaactaaattttt-ctccaaaagtgaca 9954652  T
Q  194 cttacaaaggaacgaagggagtaa 217  Q
    |||| ||||||||| ||| |||||    
T  9954651 cttaaaaaggaacggaggaagtaa 9954628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 34046951 - 34046831
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| |||||  |||||| |||||| ||||||||||||||||||||||| || ||||||||| |||||||| |||       || ||| ||||| ||||    
T  34046951 aataactaaggacaatattggtaaaacaatatttaatgttgcattgaactttg-aaagtgacagttaaatagaaacaaaaaattt-ctctaaaagtgaca 34046854  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||||||||    
T  34046853 cttaaaaaggaacggagggagta 34046831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 169
Target Start/End: Complemental strand, 1245421 - 1245338
Alignment:
Q  86 tccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||||||||| ||| ||||| ||||||| ||||||||| |||||||||||||||||||| || ||| ||||| ||||||| ||||    
T  1245421 tccacaataaataattaaggataatattggtaaaataacatttaatgttgcattgaactttg-aaaatgacaattaaataagaac 1245338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 3720768 - 3720706
Alignment:
Q  106 taatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||    
T  3720768 taatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaac 3720706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 35051946 - 35051872
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||| |||||| ||||||||||||||||||||||| |  ||||||||| ||||| ||||||    
T  35051946 aataagtaaggataatattggtaaaacaatatttaatgttgcattgaact-tcgaaagtgacagttaaagaggaac 35051872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 86 - 168
Target Start/End: Original strand, 45281508 - 45281590
Alignment:
Q  86 tccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaa 168  Q
    |||||||||| ||| ||||| ||||||| | |||| || |||||||||||||||||||| || ||||||||| |||||||||||    
T  45281508 tccacaataaataactaaggataatattggcaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaa 45281590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 86 - 163
Target Start/End: Original strand, 167608 - 167685
Alignment:
Q  86 tccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaat 163  Q
    |||||||||| ||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||    
T  167608 tccacaataaataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaat 167685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 8672396 - 8672332
Alignment:
Q  100 taaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||    
T  8672396 taagggtaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaatag 8672332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 17313177 - 17313128
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaact 143  Q
    ||||| ||||||||||||| ||||||||| |||||||||||| |||||||    
T  17313177 aataactaaggttaatatttgtaaaataacatttaatgttgcgttgaact 17313128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 17718597 - 17718529
Alignment:
Q  100 taaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||||| |||||| ||  ||||||||||||||||||| || ||||||||| ||||||||||||    
T  17718597 taagggtaatattggtaaaacaacgtttaatgttgcattgaactttg-aaagtgacagttaaataggaac 17718529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 115 - 217
Target Start/End: Original strand, 27518868 - 27518968
Alignment:
Q  115 taaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagacacttacaaaggaacgaagggag 214  Q
    |||||||| ||||||||||| |||||||| || ||||||||| ||||||||||||       || || ||||||||||||||| ||||||||| || |||    
T  27518868 taaaataacatttaatgttgtattgaactttg-aaagtgacagttaaataggaacaaaaaattt-cttcaaaagagacacttaaaaaggaacggagagag 27518965  T
Q  215 taa 217  Q
    |||    
T  27518966 taa 27518968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 34981929 - 34981809
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| |||||  |||||| |||||| || |||||||||||||||||||| || ||||||||| |||| |||||||       || ||||||||| ||||    
T  34981929 aataactaaggacaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaagtaggaacaaaaaattt-ctccaaaagcgaca 34981832  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| |||| |||| ||||||||    
T  34981831 cttaaaaagtaacggagggagta 34981809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 81 - 169
Target Start/End: Complemental strand, 40228409 - 40228321
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||| |||||||||| ||| ||||  ||||||| |||||| || |||||||||| ||||||||| || ||||||||| ||||||||||||    
T  40228409 ctctctccacaataaataactaagaataatattggtaaaacaacatttaatgttacattgaactttg-aaagtgacagttaaataggaac 40228321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 2456262 - 2456321
Alignment:
Q  106 taatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatagg 166  Q
    ||||||| |||||| || |||||||||||||||||||| || ||||||||| |||||||||    
T  2456262 taatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaatagg 2456321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 164
Target Start/End: Complemental strand, 31028748 - 31028685
Alignment:
Q  100 taaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaata 164  Q
    ||||| ||||||| |||||| || |||||||||||||||||||| | |||||||||| |||||||    
T  31028748 taagggtaatattggtaaaacaacatttaatgttgcattgaact-tttaaagtgacagttaaata 31028685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 216
Target Start/End: Original strand, 39303669 - 39303776
Alignment:
Q  107 aatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagacacttacaaaggaac 206  Q
    |||||| |||||| || |||||||||||||||||||| |  ||||||||| ||||||||||||       || ||||||||  |||||||| ||||||||    
T  39303669 aatattggtaaaacaacatttaatgttgcattgaact-tcgaaagtgacagttaaataggaacaaaaaattt-ctccaaaaatgacacttaaaaaggaac 39303766  T
Q  207 gaagggagta 216  Q
    | ||||||||    
T  39303767 ggagggagta 39303776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 2335533 - 2335459
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| |||| || |||||| || ||||| |||||||||||||| || ||||||||| ||||||||||||    
T  2335533 aataactaagggtaatgttggtaaaacaacatttattgttgcattgaactttg-aaagtgacagttaaataggaac 2335459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 4057388 - 4057314
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| |||||  |||||| |||||| || ||||||| |||||||||||| || ||||||||| ||||||||||||    
T  4057388 aataattaaggacaatattggtaaaacaacatttaatattgcattgaactttg-aaagtgacagttaaataggaac 4057314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 6750715 - 6750641
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| |||| || |||||| || ||||| |||||||||||||| || ||||||||| ||||||||||||    
T  6750715 aataactaagggtaatgttggtaaaacaacatttattgttgcattgaactttg-aaagtgacagttaaataggaac 6750641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 6757506 - 6757432
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| |||| || |||||| || ||||| |||||||||||||| || ||||||||| ||||||||||||    
T  6757506 aataactaagggtaatgttggtaaaacaacatttattgttgcattgaactttg-aaagtgacagttaaataggaac 6757432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 8730973 - 8731087
Alignment:
Q  100 taaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagacacttaca 199  Q
    ||||| |||| || |||||| || ||||| |||||||||||||| || ||||||||| ||||||||||||       || ||||||||  |||||||| |    
T  8730973 taagggtaatgttggtaaaacaacatttattgttgcattgaactttg-aaagtgacagttaaataggaacaaaaaattt-ctccaaaaatgacacttaga 8731070  T
Q  200 aaggaacgaagggagta 216  Q
    |||||||| ||||||||    
T  8731071 aaggaacggagggagta 8731087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 10180458 - 10180396
Alignment:
Q  106 taatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||||| |||||||||  |||||||||||||| |||| || ||||||||| ||||||||||||    
T  10180458 taatattggtaaaataacgtttaatgttgcattaaactttg-aaagtgacaattaaataggaac 10180396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 12342766 - 12342824
Alignment:
Q  106 taatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    ||||||| |||||| ||||||||||||||||||||||| || ||||||| | ||||||||    
T  12342766 taatattggtaaaacaatatttaatgttgcattgaactttg-aaagtgatagttaaatag 12342824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 13174029 - 13173955
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| |||| ||||||||| || ||||| |||||||||||||| |  ||||||||| ||||||||||||    
T  13174029 aataactaagggtaatgttagtaaaacaacatttattgttgcattgaact-ttaaaagtgacagttaaataggaac 13173955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 14228468 - 14228534
Alignment:
Q  101 aaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaa 168  Q
    |||| ||||||| |||||| || ||||||||||| |||||||| || ||||||||| |||||||||||    
T  14228468 aaggataatattggtaaaacaacatttaatgttgtattgaactttg-aaagtgacagttaaataggaa 14228534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 143
Target Start/End: Original strand, 21651872 - 21651935
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaact 143  Q
    |||||||| |||||| ||| ||||| ||||||| |||||| || ||||||||||||||||||||    
T  21651872 ctctttccgcaataaataactaaggataatattggtaaaacaacatttaatgttgcattgaact 21651935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 101 - 217
Target Start/End: Original strand, 23848703 - 23848817
Alignment:
Q  101 aaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagacacttacaa 200  Q
    |||| ||||||| |||||| || ||||||||||||||| || | || ||||||||| ||||||||||||       || ||||||||| |||||||| ||    
T  23848703 aaggataatattggtaaaacaacatttaatgttgcattaaattttg-aaagtgacagttaaataggaacaaaattttt-ctccaaaagtgacacttaaaa 23848800  T
Q  201 aggaacgaagggagtaa 217  Q
    ||||||| ||| |||||    
T  23848801 aggaacggaggtagtaa 23848817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 25703703 - 25703837
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttc 179  Q
    |||| |||||||||| ||| |||||  |||||| ||||||||| |||||||| ||||||||||| || ||| || || ||||||||||||       ||     
T  25703703 ctctctccacaataaataactaaggacaatattggtaaaataacatttaatgctgcattgaactttg-aaaatgccagttaaataggaacaaaatattt- 25703800  T
Q  180 ctccaaaagagacacttacaaaggaacgaagggagta 216  Q
    || |||||| |||||||| ||||||||| ||||||||    
T  25703801 cttcaaaagtgacacttaaaaaggaacggagggagta 25703837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 169
Target Start/End: Complemental strand, 35296124 - 35296070
Alignment:
Q  114 gtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||||| |||||||| |||||||||||||| || ||||||||| ||||||||||||    
T  35296124 gtaaaacaatatttattgttgcattgaactttg-aaagtgacagttaaataggaac 35296070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 168
Target Start/End: Original strand, 40521396 - 40521457
Alignment:
Q  106 taatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaa 168  Q
    ||||||| |||||| || ||||||| |||||||||||| || ||||||||| |||||||||||    
T  40521396 taatattggtaaaacaacatttaatattgcattgaactttg-aaagtgacagttaaataggaa 40521457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 143
Target Start/End: Original strand, 13935228 - 13935265
Alignment:
Q  106 taatattagtaaaataatatttaatgttgcattgaact 143  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  13935228 taatattggtaaaataatatttaatgttgtattgaact 13935265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 217
Target Start/End: Complemental strand, 15596360 - 15596323
Alignment:
Q  180 ctccaaaagagacacttacaaaggaacgaagggagtaa 217  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  15596360 ctccaaaagagacacttaaaaaggaacggagggagtaa 15596323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 107 - 143
Target Start/End: Complemental strand, 35028693 - 35028657
Alignment:
Q  107 aatattagtaaaataatatttaatgttgcattgaact 143  Q
    |||||| |||||| |||||||||||||||||||||||    
T  35028693 aatattggtaaaacaatatttaatgttgcattgaact 35028657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 4e-39; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 41425743 - 41425609
Alignment:
Q  81 ctctttccacaataataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcc 180  Q
    |||| ||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||       || |    
T  41425743 ctctctccacaataataaataagggtaatattagtaaagtaacatttaatgttgcattgaactatgtaaagtgacacttaaataggaacaaaaaaatt-c 41425645  T
Q  181 tccaaaagagacacttacaaaggaacgaagggagta 216  Q
    ||||||||||||||||| ||||||||| ||||||||    
T  41425644 tccaaaagagacacttaaaaaggaacggagggagta 41425609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 40319060 - 40319194
Alignment:
Q  81 ctctttccacaataataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcc 180  Q
    |||| ||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||       || |    
T  40319060 ctctctccacaataataaataagggtaatattagtaaagtaacatttaatgttgcattgaactatgtaaagtgacacttaaataggaacaaaaaaatt-c 40319158  T
Q  181 tccaaaagagacacttacaaaggaacgaagggagta 216  Q
    ||||||||||||||||| ||||||||| | ||||||    
T  40319159 tccaaaagagacacttaaaaaggaacggatggagta 40319194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 90 - 168
Target Start/End: Original strand, 29458861 - 29458939
Alignment:
Q  90 caataataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaa 168  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  29458861 caataataaataagggtaatattagtaaaataacatttaatgttgcattgaactatgtagagtgacacttaaataggaa 29458939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 86 - 216
Target Start/End: Original strand, 36370965 - 36371096
Alignment:
Q  86 tccacaataataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac-nnnnnnnttcctcca 184  Q
    |||||| |||||||||||| ||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||         | |||||    
T  36370965 tccacagtaataaataagggtaatattagtaaagtaacatttaatattgcattgaactatgtaaagtgacacttaaataggaacaaaaaaaaattctcca 36371064  T
Q  185 aaagagacacttacaaaggaacgaagggagta 216  Q
    ||||||||||||| ||||||||| ||||||||    
T  36371065 aaagagacacttaaaaaggaacggagggagta 36371096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 81 - 168
Target Start/End: Original strand, 33074410 - 33074497
Alignment:
Q  81 ctctttccacaataataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaa 168  Q
    |||| ||| ||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  33074410 ctctctccgcaataataaataagagtaatattagtaaaataacatttaatgttgcattgaactatgtaaagtgatacttaaataggaa 33074497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 42671545 - 42671633
Alignment:
Q  81 ctctttccacaataataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||| ||||||||||||||||||| |||||||| |||| ||| ||||||||||||||||||  ||||||||||||||||||||| ||||    
T  42671545 ctctctccacaataataaataaggataatattaataaattaacatttaatgttgcattgaatgatgtaaagtgacacttaaataagaac 42671633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 7328555 - 7328435
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| |||||||||||||| || |||||||||||||||||||| || ||||||| | ||||||||||||       || ||||||||||||||    
T  7328555 aataactaaggataatattagtaaaacaacatttaatgttgcattgaactttg-aaagtgatagttaaataggaacaaaaaattt-ctccaaaagagaca 7328458  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| | ||||||    
T  7328457 cttaaaaaggaacggaaggagta 7328435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 53745427 - 53745547
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||       || ||||||||| ||||    
T  53745427 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaacaaaaaattt-ctccaaaagtgaca 53745524  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||||||||    
T  53745525 cttaaaaaggaacggagggagta 53745547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 17102868 - 17102734
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttc 179  Q
    |||||||| |||||| ||| ||||| ||||||| |||||| || ||||||||||| |||||||| || ||||||||| ||||||||||||       ||     
T  17102868 ctctttccgcaataaataactaaggataatattggtaaaacaacatttaatgttgtattgaactttg-aaagtgacagttaaataggaacaaaaaattt- 17102771  T
Q  180 ctccaaaagagacacttacaaaggaacgaagggagta 216  Q
    |||||||||||||||||| ||| ||||| ||||||||    
T  17102770 ctccaaaagagacacttaaaaaagaacggagggagta 17102734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 51219230 - 51219304
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||| |||||| ||||||||||||||||||||||| || ||||||||| ||||||||||||    
T  51219230 aataactaaggataatattggtaaaacaatatttaatgttgcattgaactttg-aaagtgacagttaaataggaac 51219304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 81 - 217
Target Start/End: Complemental strand, 43554504 - 43554369
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttc 179  Q
    |||||||| |||||| ||| |||||  |||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||       ||     
T  43554504 ctctttccgcaataaataactaaggacaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaacaaaaatttt- 43554407  T
Q  180 ctccaaaagagacacttacaaaggaacgaagggagtaa 217  Q
    ||||||||| |||||||| ||||||||| | |||||||    
T  43554406 ctccaaaagtgacacttaaaaaggaacggatggagtaa 43554369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 143
Target Start/End: Original strand, 22099956 - 22100019
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaact 143  Q
    ||||||||| ||||| ||| ||||| ||||||||||||| ||||||||||||||||||||||||    
T  22099956 ctctttccataataaataagtaaggataatattagtaaagtaatatttaatgttgcattgaact 22100019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 48214181 - 48214047
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttc 179  Q
    |||| |||||||||| ||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| |||||| | |||       ||     
T  48214181 ctctctccacaataaataactaagggtaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaattgaaacaaatttttt- 48214084  T
Q  180 ctccaaaagagacacttacaaaggaacgaagggagta 216  Q
    ||||||||| |||||||| ||||||||| ||||||||    
T  48214083 ctccaaaagtgacacttaaaaaggaacggagggagta 48214047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 54106363 - 54106289
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||    
T  54106363 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaac 54106289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 81 - 215
Target Start/End: Complemental strand, 48152099 - 48151966
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttc 179  Q
    ||||||| ||||||| ||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| |||||| | |||       ||     
T  48152099 ctctttcaacaataaataactaagggtaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaattgaaacaaatttttt- 48152002  T
Q  180 ctccaaaagagacacttacaaaggaacgaagggagt 215  Q
    ||||||||| |||||||| ||||||||| |||||||    
T  48152001 ctccaaaagtgacacttaaaaaggaacggagggagt 48151966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 54898232 - 54898353
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||| | ||||||||||||       || ||||||||| ||||    
T  54898232 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgatagttaaataggaacaaaattttt-ctccaaaagtgaca 54898329  T
Q  194 cttacaaaggaacgaagggagtaa 217  Q
    |||| ||||||||  |||||||||    
T  54898330 cttaaaaaggaacagagggagtaa 54898353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 790650 - 790530
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| |||||  |||||| |||||| || |||||||||||||||||||| || ||||||||| |||||||| |||       || ||||||||| ||||    
T  790650 aataactaaggacaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaatagaaacataaatttt-ctccaaaagtgaca 790553  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||||||||    
T  790552 cttaaaaaggaacggagggagta 790530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 13168117 - 13167996
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||| ||||| ||||||| ||||       || ||| ||||| ||||    
T  13168117 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttgaaaaatgacagttaaataagaacaataatttt-ctctaaaagtgaca 13168019  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||||||||    
T  13168018 cttaaaaaggaacggagggagta 13167996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 33874698 - 33874766
Alignment:
Q  100 taaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||||| |||||| | ||||||||||||||||||||| || ||||||||| ||||||||||||    
T  33874698 taagggtaatattggtaaaacactatttaatgttgcattgaactttg-aaagtgacagttaaataggaac 33874766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 44544315 - 44544435
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| ||||||||| |||||||||||||||||| | || ||||||||| |||||||| |||       ||  | |||||||||||    
T  44544315 aataactaaggataatattggtaaaataacatttaatgttgcattgaattttg-aaagtgacagttaaatagaaacaattttttt-tttcaaaagagaca 44544412  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| |||||||||||| |||||    
T  44544413 cttaaaaaggaacgaagagagta 44544435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 33491285 - 33491396
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||| ||| ||||||||||||       || || |||||||||||    
T  33491285 aataattaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtaacagttaaataggaacaaaaaattt-cttcaaaagagaca 33491382  T
Q  194 cttacaaaggaacg 207  Q
    |||| |||||||||    
T  33491383 cttaaaaaggaacg 33491396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 20105306 - 20105172
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttc 179  Q
    |||| |||||||||| ||| |||||  |||||| |||||| || |||||||||||||||||||| || ||||||||| ||||| ||||||       ||     
T  20105306 ctctctccacaataaataactaaggacaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaagaggaacaaaaatttt- 20105209  T
Q  180 ctccaaaagagacacttacaaaggaacgaagggagta 216  Q
    ||||||||| |||||||| ||||||||| ||| ||||    
T  20105208 ctccaaaagtgacacttaaaaaggaacggaggtagta 20105172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 20848877 - 20848939
Alignment:
Q  106 taatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||    
T  20848877 taatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaac 20848939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 143
Target Start/End: Original strand, 22173972 - 22174035
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaact 143  Q
    ||||||||| ||||| ||| ||| | ||||||||||||| ||||||||||||||||||||||||    
T  22173972 ctctttccataataaataagtaaagataatattagtaaagtaatatttaatgttgcattgaact 22174035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 41351352 - 41351463
Alignment:
Q  106 taatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagacacttacaaaggaa 205  Q
    ||||||| |||||| ||||||||||| |||||||||||    ||||||||| ||||||||||||       || ||||||||| |||||||| ||| |||    
T  41351352 taatattggtaaaacaatatttaatgatgcattgaacttcaaaaagtgacagttaaataggaacaaaaaattt-ctccaaaagtgacacttaaaaaagaa 41351450  T
Q  206 cgaagggagtaag 218  Q
    || ||||||||||    
T  41351451 cggagggagtaag 41351463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 43775542 - 43775604
Alignment:
Q  100 taaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaat 163  Q
    ||||| ||||||| |||||| ||||||||||||||||||||||| || ||||||||| ||||||    
T  43775542 taaggataatattggtaaaacaatatttaatgttgcattgaactttg-aaagtgacagttaaat 43775604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 164
Target Start/End: Complemental strand, 45145242 - 45145160
Alignment:
Q  81 ctctttccacaataataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaata 164  Q
    |||||||| ||||||  ||||||| ||||||| |||||| || ||||||| |||||||||||| || ||||||||| |||||||    
T  45145242 ctctttccgcaataaataataaggataatattggtaaaacaacatttaatattgcattgaactttg-aaagtgacagttaaata 45145160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 47104313 - 47104375
Alignment:
Q  106 taatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||    
T  47104313 taatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaac 47104375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 107 - 162
Target Start/End: Complemental strand, 49123610 - 49123556
Alignment:
Q  107 aatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaa 162  Q
    ||||||||||||| |||||||||||||||||||| || || |||||||||||||||    
T  49123610 aatattagtaaaacaatatttaatgttgcattgatctttg-aaagtgacacttaaa 49123556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 52627369 - 52627504
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttc 179  Q
    |||| |||||||||| ||| |||||  |||||| |||||| || |||||||||||||||||||| |  ||||||||| |||||||| |||       ||     
T  52627369 ctctctccacaataaataactaaggacaatattggtaaaacaacatttaatgttgcattgaacttttaaaagtgacaattaaatagaaacaaaaaactt- 52627467  T
Q  180 ctccaaaagagacacttacaaaggaacgaagggagta 216  Q
    ||||||||| |||||||| ||||||||| | ||||||    
T  52627468 ctccaaaagtgacacttaaaaaggaacggaaggagta 52627504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 36234467 - 36234346
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||| || |||||| ||||||||||||| || ||||||||| |||||||| |||       || || || ||| ||||    
T  36234467 aataactaaggataatattggtaaaacaacatttaacgttgcattgaactttg-aaagtgacagttaaatagaaacaaaaatttt-cttcataagtgaca 36234370  T
Q  194 cttacaaaggaacgaagggagtaa 217  Q
    |||||||||||||| |||||||||    
T  36234369 cttacaaaggaacggagggagtaa 36234346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 13158585 - 13158698
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| | ||||| |||||| || |||||||||||||||||||| || ||| ||||| |||||||| |||       || || |||||| ||||    
T  13158585 aataactaaggattatattggtaaaacaacatttaatgttgcattgaactttgaaaaatgacagttaaatagaaacaattttttttcttcaaaagtgaca 13158684  T
Q  194 cttacaaaggaacg 207  Q
    |||| |||||||||    
T  13158685 cttaaaaaggaacg 13158698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 3376454 - 3376524
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    ||||| ||||| ||||||| ||||||||| |||||||||||||||| ||| || ||| ||||| ||||||||    
T  3376454 aataactaaggataatattggtaaaataacatttaatgttgcattggactttg-aaactgacagttaaatag 3376524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 27483932 - 27484006
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| |||||  |||||| |||||| || |||||||||||||||||||| |  ||||||||| ||||||||||||    
T  27483932 aataactaaggacaatattggtaaaacaacatttaatgttgcattgaact-ttaaaagtgacagttaaataggaac 27484006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 28885778 - 28885704
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| |  ||||||||  ||||||||||||    
T  28885778 aataactaaggataatattggtaaaacaacatttaatgttgcattgaact-ttaaaagtgacggttaaataggaac 28885704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 47070003 - 47070077
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| |||||  |||||| |||||| || |||||||||||||||||||| || ||||||||  ||||||||||||    
T  47070003 aataactaaggacaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacggttaaataggaac 47070077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 51244724 - 51244650
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||| |||||| || ||||||| |||||||||||| || ||||||||| ||||||| ||||    
T  51244724 aataactaaggataatattggtaaaacaacatttaatattgcattgaactttg-aaagtgacagttaaataagaac 51244650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 52175808 - 52175746
Alignment:
Q  106 taatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||||| |||||| || ||||| |||||||||||||| || ||||||||| ||||||||||||    
T  52175808 taatattggtaaaacaacatttattgttgcattgaactttg-aaagtgacagttaaataggaac 52175746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 54334329 - 54334399
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    ||||||||||| |||| || |||||| || ||||| |||||||||||||| || ||||||||| ||||||||    
T  54334329 aataaataagggtaatgttggtaaaacaacatttattgttgcattgaactttg-aaagtgacagttaaatag 54334399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 143
Target Start/End: Original strand, 55141609 - 55141671
Alignment:
Q  82 tctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaact 143  Q
    |||||| ||||||| ||| ||||| ||||||| |||||| || ||||||||||||||||||||    
T  55141609 tctttcaacaataaataactaagggtaatattggtaaaacaacatttaatgttgcattgaact 55141671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 2154215 - 2154259
Alignment:
Q  124 atttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||||||||||||||||||| || ||||||||| ||||||||||||    
T  2154215 atttaatgttgcattgaactttg-aaagtgacagttaaataggaac 2154259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 25983808 - 25983857
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaact 143  Q
    ||||| ||||| ||||||| |||||| || ||||||||||||||||||||    
T  25983808 aataactaaggataatattggtaaaacaacatttaatgttgcattgaact 25983857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 29651768 - 29651719
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaact 143  Q
    ||||| ||||| |||||||  |||||||| ||||||||||||||||||||    
T  29651768 aataactaaggataatattgataaaataacatttaatgttgcattgaact 29651719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 106 - 216
Target Start/End: Complemental strand, 52173835 - 52173726
Alignment:
Q  106 taatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagacacttacaaaggaa 205  Q
    ||||||| |||||| || ||||| |||||||||||||| || ||||||||| ||||||| ||||       ||| || ||||| |||| ||| |||||||    
T  52173835 taatattggtaaaacaacatttattgttgcattgaactttg-aaagtgacagttaaatatgaacaatttttttcttctaaaagtgacagttagaaaggaa 52173737  T
Q  206 cgaagggagta 216  Q
    || ||||||||    
T  52173736 cggagggagta 52173726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 165
Target Start/End: Original strand, 27028168 - 27028231
Alignment:
Q  101 aaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    |||| |||| || |||||| |||||||| |||||||||||||| || ||||||||| ||||||||    
T  27028168 aagggtaatgttggtaaaacaatatttattgttgcattgaactttg-aaagtgacagttaaatag 27028231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 27039759 - 27039826
Alignment:
Q  101 aaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||| |||| || |||||| || ||||| |||||||||||||| || ||||||||| ||||||||||||    
T  27039759 aagggtaatgttggtaaaacaacatttattgttgcattgaactttg-aaagtgacagttaaataggaac 27039826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 6e-38; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 81 - 217
Target Start/End: Complemental strand, 3686489 - 3686355
Alignment:
Q  81 ctctttccacaataataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcc 180  Q
    |||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||       |  |    
T  3686489 ctctctccacaataataaataagggtaatattagtaaaataacatttaatgttgcattgaactatgtaaagtgacacttaaataggaacaaaaaaat--c 3686392  T
Q  181 tccaaaagagacacttacaaaggaacgaagggagtaa 217  Q
    |||||||| |||||||| ||||||||| |||||||||    
T  3686391 tccaaaagtgacacttaaaaaggaacggagggagtaa 3686355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 86 - 216
Target Start/End: Original strand, 30368243 - 30368372
Alignment:
Q  86 tccacaataataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaa 185  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||       || ||  ||    
T  30368243 tccacaataataaataagggtaatattagtaaaataacatttaatgttgcattgatctatgtaaagtgacacttaaataagaacaaaaaaatt-ctttaa 30368341  T
Q  186 aagagacacttacaaaggaacgaagggagta 216  Q
    |||||||||||| ||||||||| ||||||||    
T  30368342 aagagacacttaaaaaggaacggagggagta 30368372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 86 - 165
Target Start/End: Original strand, 17872418 - 17872497
Alignment:
Q  86 tccacaataataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||    
T  17872418 tccacgataataaataagggtaatattagtaaaataacatttaatgttccatttaactatgtaaagtgacacttaaatag 17872497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 86 - 165
Target Start/End: Original strand, 17869431 - 17869510
Alignment:
Q  86 tccacaataataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||||||| |||| ||||||||||| ||||||||||||||    
T  17869431 tccacgataataaataagggtaatattagtaaaataacatttaatgttccatttaactatgtaaaatgacacttaaatag 17869510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 42911632 - 42911512
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||| ||||||||||||||||||||||| || ||||||||| |||||||| |||       || ||||||||||||||    
T  42911632 aataactaaggataatattggtaaaacaatatttaatgttgcattgaactttg-aaagtgacagttaaatagtaacaaaaatttt-ctccaaaagagaca 42911535  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| |||| |||| ||||||||    
T  42911534 cttaaaaagaaacggagggagta 42911512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 18465797 - 18465663
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttc 179  Q
    |||| |||||||||| ||| ||||| ||||||| |||||| ||||||||||||||||||||||| || |||||| || ||||||||||||       ||     
T  18465797 ctctctccacaataaataactaaggataatattggtaaaacaatatttaatgttgcattgaactttg-aaagtggcagttaaataggaacaaaaatttt- 18465700  T
Q  180 ctccaaaagagacacttacaaaggaacgaagggagta 216  Q
    ||||||||| |||||||| |||||||||  |||||||    
T  18465699 ctccaaaagtgacacttaaaaaggaacggtgggagta 18465663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 38502943 - 38503057
Alignment:
Q  100 taaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagacacttaca 199  Q
    ||||| ||||||| |||||||||||||||||||||||||||| | || ||||||||| ||||||| ||||       || || ||||||||||||||| |    
T  38502943 taaggataatattggtaaaataatatttaatgttgcattgaattttg-aaagtgacagttaaatatgaacaaaaaattt-cttcaaaagagacacttaaa 38503040  T
Q  200 aaggaacgaagggagta 216  Q
    |||||||| ||||||||    
T  38503041 aaggaacggagggagta 38503057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 4694846 - 4694726
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||||||||||||| || ||||||||||||||||| || ||||||||| ||||||| ||||       || |||||||||||| |    
T  4694846 aataactaaggataatattagtaaaataacatctaatgttgcattgaactttg-aaagtgacagttaaatatgaacaaaaaaatt-ctccaaaagagata 4694749  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||| ||||| ||||||||    
T  4694748 cttaaaaatgaacggagggagta 4694726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 218
Target Start/End: Original strand, 28447127 - 28447243
Alignment:
Q  100 taaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagacacttaca 199  Q
    ||||| |||||||  |||||||| ||||||||||||||| |||| || ||||||| | ||||||||||||       ||| ||||||||||||||||| |    
T  28447127 taaggataatatttataaaataacatttaatgttgcatttaactttg-aaagtgagagttaaataggaacaaaaattttc-tccaaaagagacacttaaa 28447224  T
Q  200 aaggaacgaagggagtaag 218  Q
    |||||||| ||||||||||    
T  28447225 aaggaacggagggagtaag 28447243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 26854217 - 26854351
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttc 179  Q
    |||| |||||||||| ||| ||||| ||||||| |||||| || |||||||||||||||||||| ||  |||||||| ||||||||||||       ||     
T  26854217 ctctctccacaataaataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-gaagtgacagttaaataggaacaaaaaattt- 26854314  T
Q  180 ctccaaaagagacacttacaaaggaacgaagggagta 216  Q
    ||||||||| |||||||| ||||||||  ||||||||    
T  26854315 ctccaaaagtgacacttaaaaaggaacagagggagta 26854351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 206
Target Start/End: Original strand, 28024396 - 28024506
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||| || |||||||||| ||||||||| || ||||||||| ||||||||||||       || ||||||||||||||    
T  28024396 aataactaaggataatattggtaaaacaacatttaatgttacattgaactttg-aaagtgacagttaaataggaacaaaattttt-ctccaaaagagaca 28024493  T
Q  194 cttacaaaggaac 206  Q
    |||| ||||||||    
T  28024494 cttaaaaaggaac 28024506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 38297739 - 38297874
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttc 179  Q
    |||| |||||||||| ||| ||||| |||| || |||||| || ||||| |||||||||||||| || ||||||||| ||||||| ||||       ||     
T  38297739 ctctctccacaataaataactaagggtaatgttggtaaaacaacatttattgttgcattgaactttg-aaagtgacagttaaatatgaacaaaaaaattt 38297837  T
Q  180 ctccaaaagagacacttacaaaggaacgaagggagta 216  Q
    ||||||||| |||||||| ||||||||| ||||||||    
T  38297838 ctccaaaagtgacacttaaaaaggaacggagggagta 38297874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 4985312 - 4985431
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| |||||||  ||||| | ||||||||||||||||||||| || ||||||||| |||||||| |||       |  ||||||||||||||    
T  4985312 aataattaagggtaatattgataaaacattatttaatgttgcattgaactttg-aaagtgacagttaaatagaaacaaaaaaat--ctccaaaagagaca 4985408  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||||||||    
T  4985409 cttaaaaaggaacggagggagta 4985431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 21606395 - 21606516
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| |||| || |||||| || ||||| |||||||||||||| || ||||||||| ||||||||||||       || ||||||||||||||    
T  21606395 aataattaagggtaatgttggtaaaacaacatttattgttgcattgaactttg-aaagtgacagttaaataggaacaaaaaattt-ctccaaaagagaca 21606492  T
Q  194 cttacaaaggaacgaagggagtaa 217  Q
     ||| ||||||||| |||||||||    
T  21606493 tttaaaaaggaacggagggagtaa 21606516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 4175617 - 4175737
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| |||||  ||||||  ||||| || |||||||||||||||||||| || ||||||||| ||||||||||||       || ||||||||| ||||    
T  4175617 aataactaaggacaatattgataaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaacaaaaatttt-ctccaaaagtgaca 4175714  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||||||||    
T  4175715 cttaaaaaggaacggagggagta 4175737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 39893952 - 39894020
Alignment:
Q  100 taaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||||| |||||| ||||||||||||||||||||||| |  ||||||||| ||||||||||||    
T  39893952 taagggtaatattggtaaaacaatatttaatgttgcattgaact-ttaaaagtgacagttaaataggaac 39894020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 1297875 - 1297949
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| |||||  |||||| |||||| ||||||||||||||||||||| | || ||||||||| ||||||||||||    
T  1297875 aataactaaggacaatattggtaaaacaatatttaatgttgcattgaattttg-aaagtgacagttaaataggaac 1297949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 5144135 - 5144209
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| |||| || |||||| || ||||| |||||||||||||| || ||||||||||||||||||||||    
T  5144135 aataattaagggtaatgttggtaaaacaagatttattgttgcattgaactttg-aaagtgacacttaaataggaac 5144209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 7579791 - 7579925
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttc 179  Q
    |||||||| |||||| ||| |||||  |||||| |||||| || |||||||||||||||||||| |  ||||||||| |||||||| |||       ||     
T  7579791 ctctttccgcaataaataactaaggacaatattggtaaaacaacatttaatgttgcattgaact-tcgaaagtgacagttaaatagaaacaaaaaattt- 7579888  T
Q  180 ctccaaaagagacacttacaaaggaacgaagggagta 216  Q
    ||||||||| |||||||| ||||||||| ||||||||    
T  7579889 ctccaaaagtgacacttaaaaaggaacggagggagta 7579925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 18794879 - 18794745
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttc 179  Q
    |||| |||||||||| ||| |||||  |||||| |||||| || |||||||||||||||||||| || ||||||||| |||||||| |||       ||     
T  18794879 ctctctccacaataaataactaaggacaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaatagaaacaaaaaattt- 18794782  T
Q  180 ctccaaaagagacacttacaaaggaacgaagggagta 216  Q
    ||||||||| |||||||| ||||||| | ||||||||    
T  18794781 ctccaaaagtgacacttaaaaaggaatggagggagta 18794745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 38017426 - 38017488
Alignment:
Q  106 taatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||    
T  38017426 taatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaac 38017488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 39073126 - 39073052
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||| ||||| ||||||||||||    
T  39073126 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaaatgacagttaaataggaac 39073052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 168
Target Start/End: Original strand, 8229940 - 8230013
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaa 168  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||| ||||| |||||||||||    
T  8229940 aataactaaggataatattggtaaaacaacatttaatgttgcattgaact-tggaaaatgacagttaaataggaa 8230013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 169
Target Start/End: Complemental strand, 38363260 - 38363199
Alignment:
Q  107 aatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||    
T  38363260 aatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaac 38363199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 106 - 216
Target Start/End: Original strand, 9127500 - 9127608
Alignment:
Q  106 taatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagacacttacaaaggaa 205  Q
    ||||||| ||||||||| |||||||||||||||||||| |  ||||||||| ||||||| ||||       ||| | ||||| ||||||||| |||||||    
T  9127500 taatattggtaaaataacatttaatgttgcattgaact-ttaaaagtgacaattaaatacgaacaaaaaatttcat-caaaatagacacttaaaaaggaa 9127597  T
Q  206 cgaagggagta 216  Q
    || ||||||||    
T  9127598 cggagggagta 9127608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 81 - 169
Target Start/End: Complemental strand, 12664954 - 12664866
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||| |||||||||| ||| |||||  |||||| ||||||  | |||||||||||||||||||| || ||||||||| ||||||||||||    
T  12664954 ctctctccacaataaataactaaggacaatattggtaaaactacatttaatgttgcattgaactttg-aaagtgacagttaaataggaac 12664866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 81 - 165
Target Start/End: Original strand, 19831663 - 19831747
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    ||||||||||||||| ||  ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||| | ||||||||    
T  19831663 ctctttccacaataaatagttaagggtaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgagagttaaatag 19831747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 164
Target Start/End: Complemental strand, 32389062 - 32388999
Alignment:
Q  100 taaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaata 164  Q
    ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| |||||||    
T  32389062 taagggtaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaata 32388999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 1088070 - 1088144
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| |||||  |||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||| ||||    
T  1088070 aataactaaggacaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataagaac 1088144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 4688935 - 4689009
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| |  ||||||||| ||||||| ||||    
T  4688935 aataactaaggataatattggtaaaacaacatttaatgttgcattgaact-ttaaaagtgacagttaaatatgaac 4689009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 9076153 - 9076079
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| |||||  ||||||  ||||| || |||||||||||||||||||| || ||||||||| ||||||||||||    
T  9076153 aataactaaggacaatattgataaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaac 9076079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 12784579 - 12784653
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||| |||||| ||||||| |||||| || | ||| |||||||||||||| || ||||||||| ||||||||||||    
T  12784579 aatatataagggtaatattggtaaaacaacaattagtgttgcattgaactttg-aaagtgacagttaaataggaac 12784653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 18020905 - 18020975
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||| | || ||||||||| ||||||||    
T  18020905 aataactaaggataatattggtaaaacaacatttaatgttgcattgaattttg-aaagtgacagttaaatag 18020975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 34261394 - 34261324
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    ||||| ||||| ||||||| |||||| || |||||| ||||||||||||| || ||||||||| ||||||||    
T  34261394 aataactaaggataatattggtaaaacaacatttaacgttgcattgaactttg-aaagtgacagttaaatag 34261324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 38910356 - 38910286
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| |  ||||||||| ||||||||    
T  38910356 aataactaaggataatattggtaaaacaacatttaatgttgcattgaact-ttaaaagtgacagttaaatag 38910286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 168
Target Start/End: Original strand, 4962335 - 4962396
Alignment:
Q  106 taatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaa 168  Q
    ||||||| |||||| || |||||||||| ||||||||| || ||||||||| |||||||||||    
T  4962335 taatatttgtaaaacaacatttaatgttccattgaactttg-aaagtgacagttaaataggaa 4962396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 12870049 - 12870110
Alignment:
Q  107 aatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||||| |||||| || ||||||||||| |||||||| || ||||||||| ||||||||||||    
T  12870049 aatattggtaaaacaacatttaatgttgtattgaactttg-aaagtgacagttaaataggaac 12870110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 143
Target Start/End: Complemental strand, 31802879 - 31802821
Alignment:
Q  86 tccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaact 143  Q
    |||||||||| ||| ||||| ||||||| |||||| || ||||||||||||||||||||    
T  31802879 tccacaataaataactaagggtaatattggtaaaacaacatttaatgttgcattgaact 31802821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 165
Target Start/End: Original strand, 14793913 - 14793997
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    |||||||| |||||| ||| ||||| |||||||  ||||| || |||||||||||||||||||| || ||||| ||| ||||||||    
T  14793913 ctctttccgcaataaataactaaggataatattgataaaacaacatttaatgttgcattgaactttg-aaagtaacatttaaatag 14793997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 38160368 - 38160300
Alignment:
Q  100 taaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||||| ||||||  | |||||||||||||||||||| || |||| |||| ||||||||||||    
T  38160368 taaggataatattggtaaaactacatttaatgttgcattgaactttg-aaagcgacagttaaataggaac 38160300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 40209091 - 40209179
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||| |||||||||| ||| ||||| |||| || |||||| || ||||| |||||||||||| | || ||||||||| ||||||||||||    
T  40209091 ctctatccacaataaataactaagggtaatgttggtaaaacaacatttattgttgcattgaattttg-aaagtgacagttaaataggaac 40209179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 5119253 - 5119190
Alignment:
Q  101 aaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    |||| ||||||| |||||| ||||||||||| ||||||||||| || |||||| || ||||||||    
T  5119253 aaggataatattggtaaaacaatatttaatgatgcattgaactttg-aaagtggcagttaaatag 5119190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 4e-33; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 17601267 - 17601355
Alignment:
Q  81 ctctttccacaataataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  17601267 ctctctccacaataataaataagggtaatattagtaaaataacatttaatgttgcattgaactatgtaaagtgacacttaaataagaac 17601355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 81 - 217
Target Start/End: Original strand, 26470850 - 26470985
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttc 179  Q
    |||| |||||||||| ||| ||||| ||||||| | |||| || |||||||||||||||||||| || ||||||||| ||||||||||||       ||     
T  26470850 ctctctccacaataaataactaaggataatattggcaaaacaacatttaatgttgcattgaactttg-aaagtgacaattaaataggaacaaaaaattt- 26470947  T
Q  180 ctccaaaagagacacttacaaaggaacgaagggagtaa 217  Q
    || ||||||||||||||| ||||||||| |||||||||    
T  26470948 cttcaaaagagacacttaaaaaggaacggagggagtaa 26470985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 106 - 216
Target Start/End: Complemental strand, 3849153 - 3849045
Alignment:
Q  106 taatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagacacttacaaaggaa 205  Q
    ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||       || ||||||||| |||||||| |||||||    
T  3849153 taatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaacaaaattttt-ctccaaaagtgacacttaaaaaggaa 3849056  T
Q  206 cgaagggagta 216  Q
    || ||||||||    
T  3849055 cggagggagta 3849045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 17193258 - 17193138
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| |||||  |||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||       || ||||||||| ||||    
T  17193258 aataactaaggacaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacatttaaataggaacaaaaaattt-ctccaaaagtgaca 17193161  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||||||||    
T  17193160 cttaaaaaggaacggagggagta 17193138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 22400705 - 22400825
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||| ||||||||||||||||||||||| |  ||||||||| ||||||| ||||       || ||||||||||||||    
T  22400705 aataagtaaggataatattggtaaaacaatatttaatgttgcattgaact-tcaaaagtgacagttaaataagaacaaaaaattt-ctccaaaagagaca 22400802  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||| ||||    
T  22400803 cttaaaaaggaacggaggtagta 22400825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 11431298 - 11431366
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaat 163  Q
    ||||| ||||||||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||    
T  11431298 aataactaaggttaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacaattaaat 11431366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 33260794 - 33260726
Alignment:
Q  100 taaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||    
T  33260794 taagggtaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaac 33260726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 217
Target Start/End: Complemental strand, 8176506 - 8176415
Alignment:
Q  124 atttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagacacttacaaaggaacgaagggagtaa 217  Q
    |||||||| ||||||||||| || ||||||||| ||||||||||||       ||| || |||||||||||||| |||||||||||||||||||    
T  8176506 atttaatgatgcattgaactttg-aaagtgacagttaaataggaacaaaaaatttcttc-aaaagagacacttaaaaaggaacgaagggagtaa 8176415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 11676766 - 11676827
Alignment:
Q  106 taatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||||| ||||||||| |||||||||||||||||||| ||  |||||||| ||||||||||||    
T  11676766 taatattggtaaaataacatttaatgttgcattgaactttg--aagtgacagttaaataggaac 11676827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 165
Target Start/End: Original strand, 22784800 - 22784879
Alignment:
Q  86 tccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    |||||||||| ||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||    
T  22784800 tccacaataaataagtaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaatag 22784879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 8992648 - 8992574
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| |||||||||||||| || |||||||||||||||||||| || ||||||| | ||||||| ||||    
T  8992648 aataactaaggataatattagtaaaacaacatttaatgttgcattgaactttg-aaagtgatagttaaatatgaac 8992574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 9017095 - 9017021
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| |||||||||||||| || |||||||||||||||||||| || ||||||| | ||||||| ||||    
T  9017095 aataactaaggataatattagtaaaacaacatttaatgttgcattgaactttg-aaagtgatagttaaatatgaac 9017021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 164
Target Start/End: Original strand, 17124124 - 17124193
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaata 164  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| |||||||    
T  17124124 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaata 17124193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 1252259 - 1252191
Alignment:
Q  100 taaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||||| |||||| ||||||||||||||||||||||| || |||  |||| ||||||||||||    
T  1252259 taaggataatattggtaaaacaatatttaatgttgcattgaactttg-aaaaagacaattaaataggaac 1252191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 17251403 - 17251471
Alignment:
Q  100 taaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||  ||||||||||||    
T  17251403 taagggtaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacggttaaataggaac 17251471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 24663466 - 24663406
Alignment:
Q  107 aatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaa 168  Q
    |||||| |||||| || |||||||||||||||||||| || ||||||||| |||||||||||    
T  24663466 aatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaa 24663406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 27313600 - 27313480
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||  || ||||||||||||| |||||| || ||||||||| ||||||||||||       || ||||||||||||||    
T  27313600 aataactaaggataatattggtaaatcaacatttaatgttgcaatgaactttg-aaagtgacatttaaataggaacaaaaaattt-ctccaaaagagaca 27313503  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| |||  |||| ||||||||    
T  27313502 cttaaaaaaaaacggagggagta 27313480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 7632178 - 7632245
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaa 162  Q
    ||||| ||||| ||||||| |||||| ||||||||||||||| ||||||| || ||||||||| |||||    
T  7632178 aataactaaggataatattggtaaaacaatatttaatgttgctttgaactttg-aaagtgacagttaaa 7632245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 24948336 - 24948273
Alignment:
Q  101 aaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    |||| |||||||||||||| | ||||||||||||||||||| | || ||||||||| ||||||||    
T  24948336 aagggtaatattagtaaaacactatttaatgttgcattgaattttg-aaagtgacagttaaatag 24948273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 3621690 - 3621620
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    ||||| ||||| ||||||| ||| || ||||||||||||||||||||||| || ||||||| | ||||||||    
T  3621690 aataactaaggataatattggtagaacaatatttaatgttgcattgaactttg-aaagtgatagttaaatag 3621620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 216
Target Start/End: Complemental strand, 23777389 - 23777276
Alignment:
Q  101 aaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagacacttacaa 200  Q
    |||| ||||||| |||||| || |||||||||||||||||||| |  ||||||| | ||||||||||||       || ||||||||  |||||||| ||    
T  23777389 aaggataatattggtaaaacaacatttaatgttgcattgaact-tcgaaagtgatagttaaataggaacaaaaaattt-ctccaaaattgacacttaaaa 23777292  T
Q  201 aggaacgaagggagta 216  Q
    ||||||| ||||||||    
T  23777291 aggaacggagggagta 23777276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 164
Target Start/End: Original strand, 31854632 - 31854701
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaata 164  Q
    ||||| ||||| |||| || ||||||||| ||||| |||||||||||||| || ||||||||| |||||||    
T  31854632 aataactaagggtaatgttggtaaaataacatttattgttgcattgaactttg-aaagtgacaattaaata 31854701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 24356201 - 24356269
Alignment:
Q  100 taaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| |||||||  ||||| || |||||||| ||||||||||| || ||||||||| ||||||||||||    
T  24356201 taagggtaatattgataaaacaacatttaatgatgcattgaactttg-aaagtgacagttaaataggaac 24356269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 7632256 - 7632292
Alignment:
Q  180 ctccaaaagagacacttacaaaggaacgaagggagta 216  Q
    |||||||||||||||||||||||||||| | ||||||    
T  7632256 ctccaaaagagacacttacaaaggaacggatggagta 7632292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 9e-31; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 48265159 - 48265247
Alignment:
Q  81 ctctttccacaataataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||| |||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  48265159 ctctctccataataataaataagggtaatattagtaaaataacatttaatgttgcattgaactacgtaaagtgacacttaaataggaac 48265247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 31487903 - 31487990
Alignment:
Q  82 tctttccacaataataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||    
T  31487903 tctttctacaataataaataagggtaatattagtaaaataacatttaatgttgcattgaactatataaagtgacacttgaataggaac 31487990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 48508247 - 48508113
Alignment:
Q  81 ctctttccacaataataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcc 180  Q
    |||| ||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||| |||||||||||| ||||||||||||       || |    
T  48508247 ctctctccacaataataaataagggtaatattagtaaaataacttttaatgttgcattgaactgtgtaaagtgacaattaaataggaacataaaaatt-c 48508149  T
Q  181 tccaaaagagacacttacaaaggaacgaagggagta 216  Q
    | ||||| ||||||||| ||||||||| ||||||||    
T  48508148 ttcaaaatagacacttaaaaaggaacggagggagta 48508113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 31570774 - 31570894
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||||||||||||||||||||||||||| |  ||||||||| ||||||| ||||       || ||||||||||||||    
T  31570774 aataagtaaggataatattggtaaaataatatttaatgttgcattgaact-tcgaaagtgacagttaaatatgaacaaaaaattt-ctccaaaagagaca 31570871  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||||||||    
T  31570872 cttaaaaaggaacggagggagta 31570894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 95 - 213
Target Start/End: Complemental strand, 19093367 - 19093251
Alignment:
Q  95 ataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagacac 194  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||||||| || |||||||||  |||||||||||       || ||||||||| |||||    
T  19093367 ataactaaggataatattggtaaaataatatttaatgttgcattgaactttg-aaagtgacaggtaaataggaacaaaattttt-ctccaaaagtgacac 19093270  T
Q  195 ttacaaaggaacgaaggga 213  Q
    ||| ||||||||| |||||    
T  19093269 ttaaaaaggaacggaggga 19093251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 35531432 - 35531552
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||       || ||||||||| ||||    
T  35531432 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaacaaaattttt-ctccaaaagtgaca 35531529  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||||||||    
T  35531530 cttaaaaaggaacggagggagta 35531552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 21927833 - 21927954
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| ||||||||| |||||||||||||||||||| || ||||||||| ||||||| ||||       || || |||||| ||||    
T  21927833 aataactaaggataatattggtaaaataacatttaatgttgcattgaactttg-aaagtgacagttaaataagaacaaaaaattt-ctgcaaaagtgaca 21927930  T
Q  194 cttacaaaggaacgaagggagtaa 217  Q
    |||| ||||||||| |||||||||    
T  21927931 cttaaaaaggaacggagggagtaa 21927954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 13507884 - 13507750
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttc 179  Q
    |||| |||||||||| ||| ||||| ||||||| |||||| || |||||||||| ||||||||| || ||||||||| ||||||||||||       ||     
T  13507884 ctctctccacaataaataactaaggataatattggtaaaacaacatttaatgttacattgaactttg-aaagtgacagttaaataggaacaaaaaattt- 13507787  T
Q  180 ctccaaaagagacacttacaaaggaacgaagggagta 216  Q
    ||||||||| |||||||| ||||||||  ||||||||    
T  13507786 ctccaaaagtgacacttaaaaaggaacttagggagta 13507750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 13515072 - 13514938
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttc 179  Q
    |||| |||||||||| ||| ||||| ||||||| |||||| || |||||||||| ||||||||| || ||||||||| ||||||||||||       ||     
T  13515072 ctctctccacaataaataactaaggataatattggtaaaacaacatttaatgttacattgaactttg-aaagtgacagttaaataggaacaaaaaattt- 13514975  T
Q  180 ctccaaaagagacacttacaaaggaacgaagggagta 216  Q
    ||||||||| |||||||| ||||||||  ||||||||    
T  13514974 ctccaaaagtgacacttaaaaaggaacttagggagta 13514938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 31588876 - 31588946
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    ||||| ||||| ||||||| ||||||||| |||||||||||||||||||| || ||||||||| ||||||||    
T  31588876 aataactaaggataatattggtaaaataacatttaatgttgcattgaactttg-aaagtgacagttaaatag 31588946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 10675990 - 10675881
Alignment:
Q  106 taatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagacacttacaaaggaa 205  Q
    ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||       || || ||||||||||||||| ||| |||    
T  10675990 taatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaacaaaaaattt-cttcaaaagagacacttaaaaaagaa 10675893  T
Q  206 cgaagggagtaa 217  Q
    || |||||||||    
T  10675892 cggagggagtaa 10675881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 30686511 - 30686390
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| |||||  |||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||       || ||||||||| ||||    
T  30686511 aataactaaggacaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaacaaaaaattt-ctccaaaagtgaca 30686414  T
Q  194 cttacaaaggaacgaagggagtaa 217  Q
    |||| ||||||||  |||||||||    
T  30686413 cttaaaaaggaacatagggagtaa 30686390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 81 - 207
Target Start/End: Original strand, 45226700 - 45226825
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttc 179  Q
    ||||||||||||||| ||| |||||  ||||||  ||||| || |||||||||||||||||||| || ||||||||| ||||||||||||       ||     
T  45226700 ctctttccacaataaataactaaggacaatattgataaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaacaaaaaattt- 45226797  T
Q  180 ctccaaaagagacacttacaaaggaacg 207  Q
    ||||||||| |||||||| |||||||||    
T  45226798 ctccaaaagtgacacttaaaaaggaacg 45226825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 8464586 - 8464706
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| |||||  |||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||       || ||||||||| ||||    
T  8464586 aataactaaggacaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaacaaaaaattt-ctccaaaagtgaca 8464683  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||| ||||| ||||||||    
T  8464684 cttaaaaacgaacggagggagta 8464706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 37296862 - 37296982
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| ||||||||||||| |||||||| ||||||| |  ||||||||| ||||||| ||||       || ||||||||||||||    
T  37296862 aataagtaaggataatattggtaaaataatattcaatgttgcgttgaact-tcgaaagtgacagttaaatatgaacaaaaaattt-ctccaaaagagaca 37296959  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||| ||||| ||||||||    
T  37296960 cttaaaaacgaacggagggagta 37296982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 207
Target Start/End: Complemental strand, 35255586 - 35255475
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||  || |||||||||||||||||||| || ||||||||| ||||||||||||       || || |||||||||||    
T  35255586 aataactaaggataatattggtaaatcaacatttaatgttgcattgaactttg-aaagtgacaattaaataggaacaaaaaattt-cttcaaaagagaca 35255489  T
Q  194 cttacaaaggaacg 207  Q
    |||| |||||||||    
T  35255488 cttaaaaaggaacg 35255475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 216
Target Start/End: Complemental strand, 5597917 - 5597803
Alignment:
Q  100 taaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagacacttaca 199  Q
    ||||| |||||||  ||||| | ||||||||||||||||||||| || || |||||| |||||||| |||       ||| ||||||||||||||||| |    
T  5597917 taagggtaatattgataaaacattatttaatgttgcattgaactttggaa-gtgacagttaaatagaaacaaaaaaattc-tccaaaagagacacttaaa 5597820  T
Q  200 aaggaacgaagggagta 216  Q
    |||||| ||||||||||    
T  5597819 aaggaatgaagggagta 5597803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 32994606 - 32994680
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||| ||||    
T  32994606 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataagaac 32994680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 38597691 - 38597617
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| |||| || |||||| |||||||| |||||||||||||| || ||||||||| ||||||||||||    
T  38597691 aataactaagggtaatgttggtaaaacaatatttattgttgcattgaactttg-aaagtgacagttaaataggaac 38597617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 38648557 - 38648483
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||| | || ||||||||| ||||||||||||    
T  38648557 aataactaaggataatattggtaaaacaacatttaatgttgcattgaagtttg-aaagtgacagttaaataggaac 38648483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 44818554 - 44818480
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||| |||||| ||||||||||||||||||||||| || ||| ||| | ||||||||||||    
T  44818554 aataactaaggataatattggtaaaacaatatttaatgttgcattgaactttg-aaaatgaaagttaaataggaac 44818480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 49908319 - 49908389
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    ||||| ||||| ||||||| |||||| ||||||||||||||||||||||| |  ||||||||| ||||||||    
T  49908319 aataactaaggataatattggtaaaacaatatttaatgttgcattgaact-ttaaaagtgacagttaaatag 49908389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 168
Target Start/End: Complemental strand, 12124744 - 12124671
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaa 168  Q
    ||||| |||||  |||| |||||||| || |||||||||||||||||||| || ||||||||||||||| |||||    
T  12124744 aataactaaggacaatactagtaaaacaacatttaatgttgcattgaactttg-aaagtgacacttaaaaaggaa 12124671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 168
Target Start/End: Original strand, 18033963 - 18034036
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaa 168  Q
    ||||| ||||| |||||||  ||||| |||||||||||||| |||||||| || ||||||||| |||||||||||    
T  18033963 aataactaaggataatattgataaaacaatatttaatgttggattgaactttg-aaagtgacagttaaataggaa 18034036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 37437203 - 37437264
Alignment:
Q  107 aatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||    
T  37437203 aatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaac 37437264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 44182860 - 44182739
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || | ||||||| |||||||| |||       || ||||||||  ||||    
T  44182860 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-agagtgacagttaaatagaaacaaatttttt-ctccaaaattgaca 44182763  T
Q  194 cttacaaaggaacgaagggagtaa 217  Q
    |||| ||||||||| |||||||||    
T  44182762 cttaaaaaggaacggagggagtaa 44182739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 51972430 - 51972539
Alignment:
Q  106 taatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagacacttacaaaggaa 205  Q
    ||||||| |||||||||||||| ||||||||||||| | || ||||||||| ||||||| ||||       || || ||||||||||||||| |||||||    
T  51972430 taatattggtaaaataatatttcatgttgcattgaattttg-aaagtgacaattaaataagaacaaaaaattt-cttcaaaagagacacttaaaaaggaa 51972527  T
Q  206 cgaagggagtaa 217  Q
    || | |||||||    
T  51972528 cgtatggagtaa 51972539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 19455536 - 19455604
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaat 163  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||    
T  19455536 aataattaagggtaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacaattaaat 19455604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 9362073 - 9361999
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| |||| || |||||| || ||||| |||||||||||||| || ||||||||| ||||||||||||    
T  9362073 aataactaagggtaatgttggtaaaacaacatttattgttgcattgaactttg-aaagtgacagttaaataggaac 9361999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 15660687 - 15660613
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| |||| || |||||| || ||||| |||||||||||||| || ||||||||| ||||||||||||    
T  15660687 aataactaagggtaatgttggtaaaacaacatttattgttgcattgaactttg-aaagtgacagttaaataggaac 15660613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 17013510 - 17013452
Alignment:
Q  106 taatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    ||||||| |||||| ||||||||||||||||||||||| |  ||||||||| ||||||||    
T  17013510 taatattggtaaaacaatatttaatgttgcattgaact-tcaaaagtgacagttaaatag 17013452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 35483916 - 35483990
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||| |||||| || ||||||| || ||||||||| || ||||||||| ||||||||||||    
T  35483916 aataactaaggataatattggtaaaacaacatttaatattacattgaactttg-aaagtgacagttaaataggaac 35483990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 36318453 - 36318383
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    ||||||||||| |||||||  ||||| || |||||||||||||||||||| || |||| |||| ||||||||    
T  36318453 aataaataaggataatattgataaaacaacatttaatgttgcattgaactttg-aaagcgacagttaaatag 36318383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 37735276 - 37735350
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||| |||||| |||| || |||||| |||||||||| |||||||||||| || | ||||||| ||||||||||||    
T  37735276 aatatataagggtaatgttggtaaaacaatatttaattttgcattgaactttg-acagtgacagttaaataggaac 37735350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 43500606 - 43500532
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||| |||||| || |||||||  ||||||||||| |  ||||||||||||||||||||||    
T  43500606 aataactaaggataatattggtaaaacaacatttaatactgcattgaacttta-aaagtgacacttaaataggaac 43500532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 86 - 143
Target Start/End: Complemental strand, 32348087 - 32348029
Alignment:
Q  86 tccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaact 143  Q
    |||||||||| ||| ||||| ||||||| |||||| || ||||||||||||||||||||    
T  32348087 tccacaataaataactaagggtaatattggtaaaacaacatttaatgttgcattgaact 32348029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 164
Target Start/End: Complemental strand, 13566779 - 13566707
Alignment:
Q  91 aataataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaata 164  Q
    |||||||| |||||  |||||| |||||| || |||||||||||||||||||| || ||||||||  |||||||    
T  13566779 aataataattaaggacaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacggttaaata 13566707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 28608708 - 28608575
Alignment:
Q  81 ctctttccacaataataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcc 180  Q
    |||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||       || |    
T  28608708 ctctctccacaataataaataagggtaatattagtaaaataacatttaatgttgcattgaactatgtaaag-gacacttaaataagaacaaaaaaatt-c 28608611  T
Q  181 tccaaaagagacacttacaaaggaacgaagggagta 216  Q
    | ||||||||||| ||| ||||||||| ||||||||    
T  28608610 tacaaaagagacatttaaaaaggaacggagggagta 28608575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 86 - 169
Target Start/End: Original strand, 19327920 - 19328003
Alignment:
Q  86 tccacaataataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||||| |||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  19327920 tccacagtaataaataagagtaatattagtaaaataacatttaatgttgcattgaactatgtaaaatgacatttaaataggaac 19328003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 1553615 - 1553494
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||| ||||||||||||||||||||||| |  ||||||||| ||||||||||||       || |||||||||||||     
T  1553615 aataagtaaggataatattggtaaaacaatatttaatgttgcattgaact-tcgaaagtgacagttaaataggaacaaaaaattt-ctccaaaagagacg 1553518  T
Q  194 cttacaaaggaacgaagggagtaa 217  Q
     ||| ||||||||| |||||||||    
T  1553517 attaaaaaggaacggagggagtaa 1553494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 94 - 217
Target Start/End: Complemental strand, 18470407 - 18470286
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||| ||||       || ||||||||| ||||    
T  18470407 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataagaacaaaaaattt-ctccaaaagtgaca 18470310  T
Q  194 cttacaaaggaacgaagggagtaa 217  Q
    |||| ||||||||| |||||||||    
T  18470309 cttaaaaaggaacggagggagtaa 18470286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 94 - 167
Target Start/End: Original strand, 26632323 - 26632395
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatagga 167  Q
    ||||| ||||| ||||||| ||||||||| |||||||||||||||||||| || ||||||||| ||||||||||    
T  26632323 aataactaaggataatattggtaaaataacatttaatgttgcattgaactttg-aaagtgacagttaaatagga 26632395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 33173907 - 33173833
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||    
T  33173907 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaac 33173833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 86 - 216
Target Start/End: Original strand, 33099967 - 33100096
Alignment:
Q  86 tccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctcca 184  Q
    |||||||||| ||| |||||  |||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||       || |||||    
T  33099967 tccacaataaataactaaggacaatattggtaaaacaagatttaatgttgcattgaactttg-aaagtgacagttaaataggaacaaaaaattt-ctcca 33100064  T
Q  185 aaagagacacttacaaaggaacgaagggagta 216  Q
    |||| |||||||| ||| ||||| ||||||||    
T  33100065 aaagtgacacttaaaaaagaacggagggagta 33100096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 86 - 216
Target Start/End: Complemental strand, 35112538 - 35112409
Alignment:
Q  86 tccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctcca 184  Q
    |||||||||| ||| ||||| ||||||| |||||| |||||||||||||||| |||||| || ||||||||| |||||| | |||       || |||||    
T  35112538 tccacaataaataactaagggtaatattggtaaaacaatatttaatgttgcaatgaactttg-aaagtgacagttaaattgaaacaaaattttt-ctcca 35112441  T
Q  185 aaagagacacttacaaaggaacgaagggagta 216  Q
    |||| |||||||| ||||||||| ||||||||    
T  35112440 aaagtgacacttaaaaaggaacggagggagta 35112409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 17896666 - 17896786
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| |||||  |||||| |||||| || ||||||| |||||||||||| || ||||||||| ||||||||||||       || ||||||||| ||||    
T  17896666 aataactaaggacaatattggtaaaacaacatttaatattgcattgaactttg-aaagtgacagttaaataggaacaaaattttt-ctccaaaagtgaca 17896763  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||||||||    
T  17896764 cttaaaaaggaacggagggagta 17896786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 31430659 - 31430539
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| |||||  |||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||       || || |||||| ||||    
T  31430659 aataactaaggacaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaacaaaaaattt-ctacaaaagtgaca 31430562  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||||||||    
T  31430561 cttaaaaaggaacggagggagta 31430539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 208
Target Start/End: Complemental strand, 41891357 - 41891257
Alignment:
Q  107 aatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagacacttacaaaggaac 206  Q
    |||||| |||||| || ||| |||||||||||||||| || ||||||||| ||||||||||||       || ||||||||| |||||||| ||||||||    
T  41891357 aatattggtaaaacaacattcaatgttgcattgaactttg-aaagtgacagttaaataggaacaaatttttttctccaaaagtgacacttaaaaaggaac 41891259  T
Q  207 ga 208  Q
    ||    
T  41891258 ga 41891257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 20035148 - 20035074
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || |||||| || ||||||||||||    
T  20035148 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgccagttaaataggaac 20035074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 20045559 - 20045485
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || |||||| || ||||||||||||    
T  20045559 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgccagttaaataggaac 20045485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 17354175 - 17354243
Alignment:
Q  100 taaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||| ||||    
T  17354175 taagggtaatattcgtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaatatgaac 17354243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 81 - 169
Target Start/End: Original strand, 32528457 - 32528545
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||| |||||||||| ||| ||||| ||||||| |||||| || ||||||| || ||||||||| || ||||||||| ||||||||||||    
T  32528457 ctctctccacaataaataactaaggataatattggtaaaacaacatttaatatttcattgaactttg-aaagtgacagttaaataggaac 32528545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 42842015 - 42842083
Alignment:
Q  100 taaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| |||||||  |||||||| |||||||| ||||||||||| || ||||||||| ||||||||||||    
T  42842015 taagggtaatattgataaaataacatttaatgatgcattgaactttg-aaagtgacagttaaataggaac 42842083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 44480285 - 44480405
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| |||||||  |||||||| |||||||||||||||||||| |  ||||||||  ||||||| ||||       || || |||||||||||    
T  44480285 aataactaaggataatattgataaaataacatttaatgttgcattgaact-ttaaaagtgacggttaaataagaacaaatttttt-cttcaaaagagaca 44480382  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||||||||    
T  44480383 cttaaaaaggaacggagggagta 44480405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 7312717 - 7312647
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    ||||| |||||  |||||| |||||| || |||||||||||||||||||| |  ||||||||||||||||||    
T  7312717 aataactaaggacaatattggtaaaacaacatttaatgttgcattgaact-tcgaaagtgacacttaaatag 7312647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 26724038 - 26723904
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttc 179  Q
    |||| |||||||||| ||| ||||| |||||||  |||||||  |||||||||||||||||| | || ||||||||| |||||||| |||       ||     
T  26724038 ctctctccacaataaataattaagggtaatattgataaaatatcatttaatgttgcattgaattttg-aaagtgacagttaaatagaaacaaaaaaatt- 26723941  T
Q  180 ctccaaaagagacacttacaaaggaacgaagggagta 216  Q
    |||| ||||||||||||| ||||||| | ||||||||    
T  26723940 ctccgaaagagacacttaaaaaggaatggagggagta 26723904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 33921917 - 33921991
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||  |||||| || ||| |||||||||||||||| || ||||||||| ||||||||||||    
T  33921917 aataattaaggataatatcggtaaaacaacattcaatgttgcattgaactttg-aaagtgacagttaaataggaac 33921991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 36922339 - 36922269
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| |  ||||||||| ||||||||    
T  36922339 aataactaaggataatattggtaaaacaacatttaatgttgcattgaact-ttaaaagtgacagttaaatag 36922269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 8265051 - 8264973
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaat----gttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| |||||||||||||| || |||||||    ||||||||||||| || ||||||||| ||||||||||||    
T  8265051 aataactaaggataatattagtaaaacaacatttaatgttggttgcattgaactttg-aaagtgacagttaaataggaac 8264973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 6799223 - 6799155
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaat 163  Q
    ||||| ||||| |||||||  ||||| || |||||||||||||||||||| || ||||||||| ||||||    
T  6799223 aataattaaggataatattgataaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaat 6799155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 115 - 168
Target Start/End: Original strand, 29497698 - 29497750
Alignment:
Q  115 taaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaa 168  Q
    ||||| || |||||||||||||||||||| || ||||||||| |||||||||||    
T  29497698 taaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaa 29497750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 141
Target Start/End: Original strand, 31815217 - 31815258
Alignment:
Q  100 taaggttaatattagtaaaataatatttaatgttgcattgaa 141  Q
    ||||| ||||||| |||||| |||||||||||||||||||||    
T  31815217 taagggtaatattggtaaaacaatatttaatgttgcattgaa 31815258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 35746793 - 35746857
Alignment:
Q  100 taaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    ||||| ||||||| |||||| || ||||||||||| |||||||| || ||||||||| ||||||||    
T  35746793 taagggtaatattggtaaaacaacatttaatgttgtattgaactttg-aaagtgacatttaaatag 35746857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 216
Target Start/End: Complemental strand, 3310232 - 3310196
Alignment:
Q  180 ctccaaaagagacacttacaaaggaacgaagggagta 216  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  3310232 ctccaaaagagacacttaaaaaggaacggagggagta 3310196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 3837975 - 3837888
Alignment:
Q  82 tctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||||| |||||| ||| ||| | |||||||  ||||| |||||||||||||||||| |||| || ||||||||| ||||||| ||||    
T  3837975 tctttccgcaataaataactaaagataatattgataaaacaatatttaatgttgcattaaactttg-aaagtgacagttaaataagaac 3837888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 10227349 - 10227282
Alignment:
Q  101 aaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||| |||||||  |||||||| |||||||| ||||||||| | || ||||||||| ||||||||||||    
T  10227349 aaggataatattgataaaataacatttaatgatgcattgaattttg-aaagtgacagttaaataggaac 10227282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 31399086 - 31399141
Alignment:
Q  106 taatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaa 162  Q
    ||||||| |||||| || |||||||||||||||||||| || ||||||||| |||||    
T  31399086 taatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacaattaaa 31399141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 3e-24; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 81 - 162
Target Start/End: Original strand, 31011846 - 31011927
Alignment:
Q  81 ctctttccacaataataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaa 162  Q
    |||| ||||||||||||||||| | ||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||    
T  31011846 ctctctccacaataataaataaaggtaatattagtaaaataacatttaatgttgcattgatttatgtaaagtgacacttaaa 31011927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 34357292 - 34357158
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttc 179  Q
    ||||||||||| ||| ||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||       ||     
T  34357292 ctctttccacagtaaataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacaattaaataggaacaaatttttt- 34357195  T
Q  180 ctccaaaagagacacttacaaaggaacgaagggagta 216  Q
    ||||||||| |||||||| ||||||||| ||||||||    
T  34357194 ctccaaaagtgacacttaaaaaggaacggagggagta 34357158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 10812299 - 10812179
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||       || ||||||||| ||||    
T  10812299 aataattaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaacaaaattttt-ctccaaaagtgaca 10812202  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||||||||    
T  10812201 cttaaaaaggaacggagggagta 10812179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 15677434 - 15677508
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| |||||||  ||||||||||||||||||||||||||||| || ||||||||| ||||||||||||    
T  15677434 aataactaaggataatattgataaaataatatttaatgttgcattgaactttg-aaagtgacagttaaataggaac 15677508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 41885739 - 41885605
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttc 179  Q
    |||| |||||||||| ||| |||||  |||||| ||||||||| |||||||||||||||||||| || ||||||||| ||||||||||||       ||     
T  41885739 ctctctccacaataaataactaaggacaatattggtaaaataacatttaatgttgcattgaactttg-aaagtgacagttaaataggaacaaaaaattt- 41885642  T
Q  180 ctccaaaagagacacttacaaaggaacgaagggagta 216  Q
    ||||||||| ||||| || ||||||||| ||||||||    
T  41885641 ctccaaaagtgacacctaaaaaggaacggagggagta 41885605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 11222459 - 11222579
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| |||||||| |||       || || |||||||||||    
T  11222459 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaatagaaacaaaaaattt-cttcaaaagagaca 11222556  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||||||||    
T  11222557 cttaaaaaggaacggagggagta 11222579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 13754055 - 13753935
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| |||||||  ||||| || ||||||||||| |||||||| || ||||||||| |||||| |||||       ||| |||||||||||||    
T  13754055 aataactaagggtaatattgataaaacaacatttaatgttgtattgaactttg-aaagtgacagttaaattggaacaaaaatgttc-tccaaaagagaca 13753958  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||||||||||||    
T  13753957 cttaaaaaggaacgaagggagta 13753935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 26342680 - 26342560
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| |||||  |||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||       || ||||||||| ||||    
T  26342680 aataactaaggacaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaaccaaaaattt-ctccaaaagtgaca 26342583  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||||||||    
T  26342582 cttaaaaaggaacggagggagta 26342560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 43077386 - 43077318
Alignment:
Q  100 taaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||||| |||||| ||||||||||||||||||||||| || ||||||||| ||||||||||||    
T  43077386 taagggtaatattggtaaaacaatatttaatgttgcattgaactttg-aaagtgacagttaaataggaac 43077318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 4654819 - 4654749
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    ||||| ||||| ||||||| |||||||||||||||||||||||||||||| ||  |||||||| ||||||||    
T  4654819 aataactaaggataatattggtaaaataatatttaatgttgcattgaactttg-caagtgacagttaaatag 4654749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 94 - 217
Target Start/End: Original strand, 14295900 - 14296021
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| |||||  |||||| |||||| || ||||||||||| |||||||| || ||||||||| ||||||||||||       || ||||||||| ||||    
T  14295900 aataactaaggacaatattggtaaaacaacatttaatgttgtattgaactttg-aaagtgacagttaaataggaacaaaaatttt-ctccaaaagtgaca 14295997  T
Q  194 cttacaaaggaacgaagggagtaa 217  Q
    |||| ||||||||| |||||||||    
T  14295998 cttaaaaaggaacggagggagtaa 14296021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 32854929 - 32854997
Alignment:
Q  100 taaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||    
T  32854929 taagggtaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaac 32854997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 34399302 - 34399182
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||| ||||||||||||||||||||||| || |||||||   |||||||||||        || ||||||||| ||||    
T  34399302 aataactaaggataatattggtaaaacaatatttaatgttgcattgaactttg-aaagtgatggttaaataggaa-taaaaaatttctccaaaagtgaca 34399205  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||||||||    
T  34399204 cttaaaaaggaacggagggagta 34399182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 479116 - 479190
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| |||||||  ||||| || |||||||||||||||||||| || ||||||||| ||||||||||||    
T  479116 aataactaaggataatattgataaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaac 479190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 3363684 - 3363610
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||| ||||    
T  3363684 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataagaac 3363610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 15893723 - 15893797
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||| ||||| ||||||||||||    
T  15893723 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaaatgacagttaaataggaac 15893797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 25187282 - 25187344
Alignment:
Q  106 taatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||||| ||||||||| ||||||| |||||||||||| || ||||||||| ||||||||||||    
T  25187282 taatattggtaaaataacatttaatattgcattgaactttg-aaagtgacagttaaataggaac 25187344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 36404985 - 36405055
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    ||||| ||||| ||||||| ||||||||| ||||||| |||||||||||| || ||||||||| ||||||||    
T  36404985 aataactaaggataatattggtaaaataacatttaatattgcattgaactttg-aaagtgacagttaaatag 36405055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 168
Target Start/End: Original strand, 28145715 - 28145788
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaa 168  Q
    ||||| |||||  |||||| |||||| || |||||||||||||||||||| || ||||||||| |||||||||||    
T  28145715 aataactaaggacaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaa 28145788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 81 - 169
Target Start/End: Complemental strand, 2012975 - 2012887
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||| |||||||||| ||| ||||| |||| || |||||| || ||||| |||||||||||||| || ||||||||| ||||||||||||    
T  2012975 ctctctccacaataaataactaagggtaatgttggtaaaacaacatttattgttgcattgaactttg-aaagtgacagttaaataggaac 2012887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 81 - 169
Target Start/End: Complemental strand, 6013589 - 6013501
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||||||| |||||| ||| ||||| |||| || |||||| || ||||| |||||||||||||| || ||||||||| ||||||||||||    
T  6013589 ctctttccgcaataaataactaagggtaatgttggtaaaacaacatttattgttgcattgaactttg-aaagtgacagttaaataggaac 6013501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 217
Target Start/End: Complemental strand, 14541445 - 14541310
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttc 179  Q
    |||| |||||||||| ||| ||||| ||||||| |||||| ||  ||||||||||||||||||| || ||||||||| |||||| | |||       ||     
T  14541445 ctctctccacaataaataactaaggataatattggtaaaacaacgtttaatgttgcattgaactttg-aaagtgacagttaaattgaaacaatattttt- 14541348  T
Q  180 ctccaaaagagacacttacaaaggaacgaagggagtaa 217  Q
    ||||||||| |||| ||| ||||||||| |||||||||    
T  14541347 ctccaaaagtgacatttaaaaaggaacggagggagtaa 14541310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 4883691 - 4883629
Alignment:
Q  106 taatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||||| |||||| || |||||||||||||||||||| || ||| ||||| ||||||||||||    
T  4883691 taatattggtaaaacaacatttaatgttgcattgaactttg-aaaatgacagttaaataggaac 4883629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 11560190 - 11560260
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    ||||| |||||  |||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||    
T  11560190 aataactaaggacaatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaatag 11560260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 13215493 - 13215419
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||| |||||| || |||||||||| |||||||||  | ||||||||| ||||||||||||    
T  13215493 aataagtaaggataatattggtaaaacaacatttaatgttacattgaacttcg-aaagtgacagttaaataggaac 13215419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 14284228 - 14284167
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgaca 156  Q
    ||||| |||||  |||||| ||||||||| |||||||||||||||||||| || |||||||||    
T  14284228 aataattaaggacaatattggtaaaataacatttaatgttgcattgaactttg-aaagtgaca 14284167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 9706887 - 9706838
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaact 143  Q
    ||||| ||||| ||||||| |||||| || ||||||||||||||||||||    
T  9706887 aataactaaggataatattggtaaaacaacatttaatgttgcattgaact 9706838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 10263850 - 10263782
Alignment:
Q  100 taaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||||| |||||| || ||||||| |||||||||| | || ||||||||| ||||||||||||    
T  10263850 taaggataatattggtaaaacaacatttaatattgcattgaaatttg-aaagtgacagttaaataggaac 10263782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 169
Target Start/End: Original strand, 38186186 - 38186269
Alignment:
Q  86 tccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||||||||| ||| |||||  |||||| |||||| || |||||||||||||||||||| || ||| ||||| ||||||| ||||    
T  38186186 tccacaataaataactaaggacaatattggtaaaacaacatttaatgttgcattgaactttg-aaaatgacagttaaataagaac 38186269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 81 - 169
Target Start/End: Complemental strand, 49261 - 49173
Alignment:
Q  81 ctctttccacaataa-taaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||| |||||||||| ||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||||||    
T  49261 ctctctccacaataaataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataggaac 49173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 1133 - 1084
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaact 143  Q
    ||||| ||||||||||||| ||||||||||||||||||||| ||||||||    
T  1133 aataactaaggttaatattggtaaaataatatttaatgttgtattgaact 1084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 6496 - 6545
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaact 143  Q
    ||||| ||||||||||||| ||||||||||||||||||||| ||||||||    
T  6496 aataactaaggttaatattggtaaaataatatttaatgttgtattgaact 6545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 138871 - 138992
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||| ||||| ||||||| ||||       || ||| ||||| ||||    
T  138871 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttgaaaaatgacagttaaataagaacaataatttt-ctctaaaagtgaca 138969  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||||||||    
T  138970 cttaaaaaggaacggagggagta 138992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 207
Target Start/End: Complemental strand, 148403 - 148290
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| | ||||| |||||| || |||||||||||||||||||| || ||| ||||| |||||||| |||       || || |||||| ||||    
T  148403 aataactaaggattatattggtaaaacaacatttaatgttgcattgaactttgaaaaatgacagttaaatagaaacaattttttttcttcaaaagtgaca 148304  T
Q  194 cttacaaaggaacg 207  Q
    |||| |||||||||    
T  148303 cttaaaaaggaacg 148290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1213 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1213
Description:

Target: scaffold1213; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 108 - 182
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||| ||||    
T  108 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaataagaac 182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0831 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 2907 - 2837
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaatag 165  Q
    ||||| ||||| ||||||| |||||| || |||||||||||||||||||| || ||||||||| ||||||||    
T  2907 aataactaaggataatattggtaaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaatag 2837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 7518 - 7450
Alignment:
Q  100 taaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| |||||||  |||||||| |||||||| ||||||||||| || ||||||||| ||||||||||||    
T  7518 taagggtaatattgataaaataacatttaatgatgcattgaactttg-aaagtgacagttaaataggaac 7450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 184268 - 184388
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaacnnnnnnnttcctccaaaagagaca 193  Q
    ||||| ||||| |||| || |||||| |||||||| |||||||||||||| || |||| |||| |||||||||||        || ||||||||| ||||    
T  184268 aataactaagggtaatgttggtaaaacaatatttattgttgcattgaactttg-aaagcgacagttaaataggaa-taaaaaatttctccaaaagtgaca 184365  T
Q  194 cttacaaaggaacgaagggagta 216  Q
    |||| ||||||||| ||||||||    
T  184366 cttaaaaaggaacggagggagta 184388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 169
Target Start/End: Complemental strand, 69200 - 69126
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| |||||  |||||| |||||| || ||||||| |||||||||||| || ||||||||| ||||||||||||    
T  69200 aataactaaggacaatattggtaaaacaacatttaatattgcattgaactttg-aaagtgacaattaaataggaac 69126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 72088 - 72162
Alignment:
Q  94 aataaataaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| ||||| ||||||| |||||  || |||||||||||||||||||| || ||||||||| ||||||| ||||    
T  72088 aataactaaggataatattggtaaatcaacatttaatgttgcattgaactttg-aaagtgacaattaaataagaac 72162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 77176 - 77114
Alignment:
Q  106 taatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    |||||||||||||| || ||||||| |||||||| ||| || ||||||||| ||||||||||||    
T  77176 taatattagtaaaacaacatttaatattgcattggactttg-aaagtgacagttaaataggaac 77114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 147275 - 147343
Alignment:
Q  100 taaggttaatattagtaaaataatatttaatgttgcattgaactatgtaaagtgacacttaaataggaac 169  Q
    ||||| |||||||  ||||| || |||||||||||||||||||| || ||||||||| ||||||| ||||    
T  147275 taagggtaatattgataaaacaacatttaatgttgcattgaactttg-aaagtgacagttaaatatgaac 147343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University