View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8961_low_11 (Length: 579)
Name: NF8961_low_11
Description: NF8961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8961_low_11 |
 | |
|
| [»] scaffold0961 (2 HSPs) |
| | |
|
| [»] scaffold1825 (2 HSPs) |
| | |
|
Alignment Details
Target: chr2 (Bit Score: 317; Significance: 1e-178; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 317; E-Value: 1e-178
Query Start/End: Original strand, 238 - 578
Target Start/End: Original strand, 5920997 - 5921337
Alignment:
| Q |
238 |
gcttggatttgcaaaatcttcccaaatagcagaaaatttaaggttgaagtgatgtgaagtaatgaaaaggaagaaaactaggagaaagaaaaattgaagg |
337 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5920997 |
gcttggatttgcaaaatcttcccaagtagcagaaaatttaaggttgaagtgatgtgaagtaatgaaaaggaagaaaactaggagaaagaaaaattgaagg |
5921096 |
T |
|
| Q |
338 |
cttgaatttaggggtaattaggtaagtacttgtaccttgagaaactaaaggttgaaaaatgattttgatctgccgcagaagctcagatttgtagcgtcaa |
437 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5921097 |
cttgaatttaggggtaattaggtaagtacttgtaccttgagaaattaaaggttgaaaagtgattttgatctgccgcagaagctcagatttgtagcgtcat |
5921196 |
T |
|
| Q |
438 |
accaaaccgcgtttgagcacttgccgtacaatctacagaatcgcgtttgaattcatcaaaacatcataggaaccgccgaactcgcgtttggagaagaaaa |
537 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5921197 |
cccaaaccgcgtttgagcacttgccgtacaatctacagaatcgcgtttgaattcatccaaacatcataggaaccgccgaactcgcgtttggagaagaaaa |
5921296 |
T |
|
| Q |
538 |
cgtgggtttgaggcgtgaagaagctttaccaaacatgcact |
578 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5921297 |
cgtgggtttgaggcgtgaagaagctttaccaaacatgcact |
5921337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 238 - 577
Target Start/End: Complemental strand, 36307507 - 36307168
Alignment:
| Q |
238 |
gcttggatttgcaaaatcttcccaaatagcagaaaatttaaggttgaagtgatgtgaagtaatgaaaaggaagaaaactaggagaaagaaaaattgaagg |
337 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36307507 |
gcttggatttgcaaaatcttcccaagtagcagaaaatttaaggttgaagtgatgtgaagtaatgaaaaggaagaaaactaggagaaagaaaaattgaagg |
36307408 |
T |
|
| Q |
338 |
cttgaatttaggggtaattaggtaagtacttgtaccttgagaaactaaaggttgaaaaatgattttgatctgccgcagaagctcagatttgtagcgtcaa |
437 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36307407 |
cttgaatttaggggtaattaggtaagtacttgtaccttgagaaattaaaggttgaaaagtgattttgatctgccgcagaagctcagatttgtagcgtcat |
36307308 |
T |
|
| Q |
438 |
accaaaccgcgtttgagcacttgccgtacaatctacagaatcgcgtttgaattcatcaaaacatcataggaaccgccgaactcgcgtttggagaagaaaa |
537 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36307307 |
cccaaaccgcgtttgagcacttgccgtacaatctacagaatcgcgtttgaattcatccaaacatcataggaaccgccgaactcgcgtttggagaagaaaa |
36307208 |
T |
|
| Q |
538 |
cgtgggtttgaggcgtgaagaagctttaccaaacatgcac |
577 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36307207 |
cgtgggtttgaggcgtgaagaagctttaccaaacatgcac |
36307168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 16 - 196
Target Start/End: Original strand, 5920776 - 5920955
Alignment:
| Q |
16 |
aacagttttgaagcaagaaaacaaagcaannnnnnnnnnatgaatatgtatttacctttaggccttggcagaacaatgaaatgattctcacaagtagctc |
115 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5920776 |
aacagttttgaagcaagaaaacaaagcaattttttttt-atgaatatgtatttacctttaggccttggcagaacaatgaaatgattctcacaagtagctc |
5920874 |
T |
|
| Q |
116 |
ataagcatcatatataggggaaagatgaatgaataaattcacccaaccaacacatctaccatgagtaatgagattaaccac |
196 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5920875 |
ataagcatcatatataggggaaagatgaatgaataaattcacccaaccaacacatctaccatgagtaatgagattaaccac |
5920955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 16 - 196
Target Start/End: Complemental strand, 36307728 - 36307549
Alignment:
| Q |
16 |
aacagttttgaagcaagaaaacaaagcaannnnnnnnnnatgaatatgtatttacctttaggccttggcagaacaatgaaatgattctcacaagtagctc |
115 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36307728 |
aacagttttgaagcaagaaaacaaagcaattttttttt-atgaatatgtatttacctttaggccttggcagaacaatgaaatgattctcacaagtagctc |
36307630 |
T |
|
| Q |
116 |
ataagcatcatatataggggaaagatgaatgaataaattcacccaaccaacacatctaccatgagtaatgagattaaccac |
196 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
36307629 |
ataagcatcatatataggggaaagatgaatgaataaattcacccatccaacacatctaccatgagtaatgagattaaccac |
36307549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 362
Target Start/End: Complemental strand, 23357746 - 23357661
Alignment:
| Q |
277 |
aaggttgaagtgatgtgaagtaatgaaaaggaagaaaactag-gagaaagaaaaattgaaggcttgaatttaggggtaattaggtaa |
362 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| | | |||||||| |||||||||||||||||||| |||||||| ||||| |
|
|
| T |
23357746 |
aaggttgaagtgatgtgaagtaatgaaa-ggaagaaaggttgtgagaaagagaaattgaaggcttgaatttatgggtaatttggtaa |
23357661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 151; Significance: 1e-79; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 238 - 420
Target Start/End: Complemental strand, 22477415 - 22477233
Alignment:
| Q |
238 |
gcttggatttgcaaaatcttcccaaatagcagaaaatttaaggttgaagtgatgtgaagtaatgaaaaggaagaaaactaggagaaagaaaaattgaagg |
337 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
22477415 |
gcttggatttgcaaaatcttcccaagtagcagaaaattgaaggttgaagtgatgtgaagtaatgaaaaggaagaaaactgggagaaagaaaaattgaagg |
22477316 |
T |
|
| Q |
338 |
cttgaatttaggggtaattaggtaagtacttgtaccttgagaaactaaaggttgaaaaatgattttgatctgccgcagaagct |
420 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||| ||||| ||||||| |
|
|
| T |
22477315 |
cttgaatttaggggtaattaggtaagtacttgtcccttgagaaattaaaggttgaaaagtgattttgatttgccgtagaagct |
22477233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 16 - 196
Target Start/End: Complemental strand, 22477638 - 22477457
Alignment:
| Q |
16 |
aacagttttgaagcaagaaaacaaagcaannnnnnnnnnatgaatatgtatttacctttaggccttggcagaacaatgaaatgattctcacaagtagctc |
115 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22477638 |
aacagttttgaagcaagaaaacaaagcaattttttttttatgaatatgtatttacctttaggccttggcagaacaatgaaatgattctcacaagtagctc |
22477539 |
T |
|
| Q |
116 |
ataagcatcatatata-ggggaaagatgaatgaataaattcacccaaccaacacatctaccatgagtaatgagattaaccac |
196 |
Q |
| |
|
|||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22477538 |
ataagcatcatatatagggggaaagatgaaggaataaattcacccaaccaacacatctaccatgagtaatgagattaaccac |
22477457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 408 - 579
Target Start/End: Original strand, 8049739 - 8049910
Alignment:
| Q |
408 |
tgccgcagaagctcagatttgtagcgtcaaaccaaaccgcgtttgagcacttgccgtacaatctacagaatcgcgtttgaattcatcaaaacatcatagg |
507 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||| |||||| ||||| |
|
|
| T |
8049739 |
tgccgcagaagctcagaattgtagcttcaaaccaaaccgagtttgagcacttgccgtacaatctacagaatcacgtttgaatttatccaaacattatagg |
8049838 |
T |
|
| Q |
508 |
aaccgccgaactcgcgtttggagaagaaaacgtgggtttgaggcgtgaagaagctttaccaaacatgcactt |
579 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||| | ||||| ||||||| |||||| |
|
|
| T |
8049839 |
aaccgccgaactcgcgtttggagaagaaaacgtgggtttggggcgtgaaaacgctttgccaaacaggcactt |
8049910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 408 - 578
Target Start/End: Original strand, 39988660 - 39988830
Alignment:
| Q |
408 |
tgccgcagaagctcagatttgtagcgtcaaaccaaaccgcgtttgagcacttgccgtacaatctacagaatcgcgtttgaattcatcaaaacatcatagg |
507 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||| |||||| ||||| |
|
|
| T |
39988660 |
tgccgcagaagctcagatttgtagcttcaaaccaaaccgagtttgagcacttgccgtacaatctacagaatcacgtttgaatttatccaaacattatagg |
39988759 |
T |
|
| Q |
508 |
aaccgccgaactcgcgtttggagaagaaaacgtgggtttgaggcgtgaagaagctttaccaaacatgcact |
578 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||| |||||||| | ||||| ||||||| ||||| |
|
|
| T |
39988760 |
aaccgccgaactcgcgtttggagatgaaaacgtgggtttggggcgtgaaaacgctttgccaaacaggcact |
39988830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 408 - 556
Target Start/End: Original strand, 7386587 - 7386735
Alignment:
| Q |
408 |
tgccgcagaagctcagatttgtagcgtcaaaccaaaccgcgtttgagcacttgccgtacaatctacagaatcgcgtttgaattcatcaaaacatcatagg |
507 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||| |||||||||||| |
|
|
| T |
7386587 |
tgccgcagaagctcagatttgtagcttcaaaccaaaccgcgtttgagcacttatcgtacaatctacaaaaccgcgtttgaattcatccaaacatcatagg |
7386686 |
T |
|
| Q |
508 |
aaccgccgaactcgcgtttggagaagaaaacgtgggtttgaggcgtgaa |
556 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
7386687 |
aaccgccgaactcgcgtttggagaagaaaacgtgggtttggggcgtgaa |
7386735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 277 - 362
Target Start/End: Original strand, 41741209 - 41741294
Alignment:
| Q |
277 |
aaggttgaagtgatgtgaagtaatgaaaaggaagaaaactagga-gaaagaaaaattgaaggcttgaatttaggggtaattaggtaa |
362 |
Q |
| |
|
||||||||| |||||||||||||||||| |||||||| | | | |||||| |||||||||||||||||||| |||||||| ||||| |
|
|
| T |
41741209 |
aaggttgaaatgatgtgaagtaatgaaa-ggaagaaagtttgtaagaaagagaaattgaaggcttgaatttatgggtaatttggtaa |
41741294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 151; Significance: 1e-79; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 238 - 420
Target Start/End: Original strand, 35574085 - 35574267
Alignment:
| Q |
238 |
gcttggatttgcaaaatcttcccaaatagcagaaaatttaaggttgaagtgatgtgaagtaatgaaaaggaagaaaactaggagaaagaaaaattgaagg |
337 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
35574085 |
gcttggatttgcaaaatcttcccaagtagcagaaaattgaaggttgaagtgatgtgaagtaatgaaaaggaagaaaactgggagaaagaaaaattgaagg |
35574184 |
T |
|
| Q |
338 |
cttgaatttaggggtaattaggtaagtacttgtaccttgagaaactaaaggttgaaaaatgattttgatctgccgcagaagct |
420 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||| ||||| ||||||| |
|
|
| T |
35574185 |
cttgaatttaggggtaattaggtaagtacttgtcccttgagaaattaaaggttgaaaagtgattttgatttgccgtagaagct |
35574267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 16 - 196
Target Start/End: Original strand, 35573863 - 35574043
Alignment:
| Q |
16 |
aacagttttgaagcaagaaaacaaagcaannnnnnnnnnatgaatatgtatttacctttaggccttggcagaacaatgaaatgattctcacaagtagctc |
115 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35573863 |
aacagttttgaagcaagaaaacaaagcaattttttttt-atgaatatgtatttacctttaggccttggcagaacaatgaaatgattctcacaagtagctc |
35573961 |
T |
|
| Q |
116 |
ataagcatcatatata-ggggaaagatgaatgaataaattcacccaaccaacacatctaccatgagtaatgagattaaccac |
196 |
Q |
| |
|
|||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35573962 |
ataagcatcatatatagggggaaagatgaaggaataaattcacccaaccaacacatctaccatgagtaatgagattaaccac |
35574043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 322 - 421
Target Start/End: Complemental strand, 35535581 - 35535482
Alignment:
| Q |
322 |
aaagaaaaattgaaggcttgaatttaggggtaattaggtaagtacttgtaccttgagaaactaaaggttgaaaaatgattttgatctgccgcagaagctc |
421 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||| ||||| || |||| |||||||| |||||||| |
|
|
| T |
35535581 |
aaagagaaattgaaggcttgaatttaggggtaattaggtaagtacctgtcacttgagaaattaaaggctgaaacgtggttttcatctgccgtagaagctc |
35535482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 362
Target Start/End: Original strand, 292336 - 292421
Alignment:
| Q |
277 |
aaggttgaagtgatgtgaagtaatgaaaaggaagaaaactag-gagaaagaaaaattgaaggcttgaatttaggggtaattaggtaa |
362 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| | | |||||||| |||||||||||||||||||| |||||||| ||||| |
|
|
| T |
292336 |
aaggttgaagtgatgtgaagtaatgaaa-ggaagaaaggttgtgagaaagagaaattgaaggcttgaatttatgggtaatttggtaa |
292421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 143; Significance: 8e-75; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 238 - 420
Target Start/End: Complemental strand, 16543706 - 16543524
Alignment:
| Q |
238 |
gcttggatttgcaaaatcttcccaaatagcagaaaatttaaggttgaagtgatgtgaagtaatgaaaaggaagaaaactaggagaaagaaaaattgaagg |
337 |
Q |
| |
|
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
16543706 |
gcttggatttgcaaaatcttccgaagtagcagaaaatttaaggttgaagtgatgtgaagtaatgaaaagaaagaaaactgggagaaagaaaaattgaagg |
16543607 |
T |
|
| Q |
338 |
cttgaatttaggggtaattaggtaagtacttgtaccttgagaaactaaaggttgaaaaatgattttgatctgccgcagaagct |
420 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||| || ||||||||||||| ||||||| |
|
|
| T |
16543606 |
cttgaatttaggggtaattaggtaagtacatgtcccttgagaaattaaaggttgaaaagtggttttgatctgccgtagaagct |
16543524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 238 - 420
Target Start/End: Original strand, 17834430 - 17834612
Alignment:
| Q |
238 |
gcttggatttgcaaaatcttcccaaatagcagaaaatttaaggttgaagtgatgtgaagtaatgaaaaggaagaaaactaggagaaagaaaaattgaagg |
337 |
Q |
| |
|
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||| |||||||||| |
|
|
| T |
17834430 |
gcttggatttgtaaaatcttcccaagtagcagaaaatttaaggttgaagtgatgtgaagaaacaaaaaggaagaaaactgtgagaaagagaaattgaagg |
17834529 |
T |
|
| Q |
338 |
cttgaatttaggggtaattaggtaagtacttgtaccttgagaaactaaaggttgaaaaatgattttgatctgccgcagaagct |
420 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| || |||||||||||| ||||||| |
|
|
| T |
17834530 |
cttgaatttaggggtaattaggtaagtacttgtcccttgagaaattaaaggttgaaacgtggttttgatctgccatagaagct |
17834612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 16 - 196
Target Start/End: Complemental strand, 16543931 - 16543748
Alignment:
| Q |
16 |
aacagttttgaagcaagaaaacaaagcaa--nnnnnnnnnnatgaatatgtatttacctttaggccttggcagaacaatgaaatgattctcacaagtagc |
113 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
16543931 |
aacagttttgaagcaagaaaacaaagcaattttttttttttatgaatatgtatttacctttaggccttggcagaacaatgaaatgattctcataagtagc |
16543832 |
T |
|
| Q |
114 |
tcataagcatcatatata-ggggaaagatgaatgaataaattcacccaaccaacacatctaccatgagtaatgagattaaccac |
196 |
Q |
| |
|
|||||||||||||||||| |||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16543831 |
tcataagcatcatatatagggggaaagctgaaggaataaattcatccaaccaacacatctaccatgagtaatgagattaaccac |
16543748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 16 - 196
Target Start/End: Original strand, 17834199 - 17834381
Alignment:
| Q |
16 |
aacagttttgaagcaagaaaacaaagcaannnnnnnnnn-atgaatatgtatttacctttaggccttggcagaacaatgaaatgattctcacaagtagct |
114 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
17834199 |
aacagttttgaagcaagaaaacaaagcaaaaaaataatttatgaatatgtatttacctttaggccttggcagaacaatggaatgattctcacaagtagct |
17834298 |
T |
|
| Q |
115 |
cataagcatcatata-taggggaaagatgaatgaataaattcacccaaccaacacatctaccatgagtaatgagattaaccac |
196 |
Q |
| |
|
||||||||||||||| ||||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17834299 |
cataagcatcatatacaaggggaaagcttaaggaataaattcacccaaccaacacatctaccatgagtaatgagattaaccac |
17834381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 417 - 579
Target Start/End: Complemental strand, 24633345 - 24633184
Alignment:
| Q |
417 |
agctcagatttgtagcgtcaaaccaaaccgcgtttgagcacttgccgtacaatctacagaatcgcgtttgaattcatcaaaacatcataggaaccgccga |
516 |
Q |
| |
|
|||| ||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||| |||||| |
|
|
| T |
24633345 |
agcttagatttgtagcttcaaaccaaaccacgtttgagcacttgcc-tacaatctacagaatcgcgtttgaattcatccaaacatcatgggaatcgccga |
24633247 |
T |
|
| Q |
517 |
actcgcgtttggagaagaaaacgtgggtttgaggcgtgaagaagctttaccaaacatgcactt |
579 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| | ||||| |||||||||||||| |
|
|
| T |
24633246 |
actcgcgtttggagaagaaaacgtgggtttggggcgtgaaaacgctttgccaaacatgcactt |
24633184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0961 (Bit Score: 127; Significance: 3e-65; HSPs: 2)
Name: scaffold0961
Description:
Target: scaffold0961; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 55 - 196
Target Start/End: Original strand, 534 - 676
Alignment:
| Q |
55 |
atgaatatgtatttacctttaggccttggcagaacaatgaaatgattctcacaagtagctcataagcatcatatata-ggggaaagatgaatgaataaat |
153 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||| |
|
|
| T |
534 |
atgaatatgtatttacctttaggccttggcagaacaatgaaatgattctcacaagtagctcataagcatcatatatagggggaaagctgaaggaataaat |
633 |
T |
|
| Q |
154 |
tcacccaaccaacacatctaccatgagtaatgagattaaccac |
196 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
634 |
tcacccaaccaacacatctaccatgagtaatgagattaaccac |
676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0961; HSP #2
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 238 - 420
Target Start/End: Original strand, 698 - 880
Alignment:
| Q |
238 |
gcttggatttgcaaaatcttcccaaatagcagaaaatttaaggttgaagtgatgtgaagtaatgaaaaggaagaaaactaggagaaagaaaaattgaagg |
337 |
Q |
| |
|
||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||| |
|
|
| T |
698 |
gcttggatttgtaaaatcttccgaagtagcagaaaatttaaggttgaagtgatgtgaagtaatgaaaaggaagaaaattgtgagaaagagaaattgaagg |
797 |
T |
|
| Q |
338 |
cttgaatttaggggtaattaggtaagtacttgtaccttgagaaactaaaggttgaaaaatgattttgatctgccgcagaagct |
420 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||| || |||||||| |||| ||||||| |
|
|
| T |
798 |
cttgaatttaggggtaattaggtaagtacctgtcccttgagaaattaaaggttgaaacgtggttttgatcagccgtagaagct |
880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1825 (Bit Score: 110; Significance: 4e-55; HSPs: 2)
Name: scaffold1825
Description:
Target: scaffold1825; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 55 - 195
Target Start/End: Complemental strand, 567 - 426
Alignment:
| Q |
55 |
atgaatatgtatttacctttaggccttggcagaacaatgaaatgattctcacaagtagctcataagcatcatatatagggg-aaagatgaatgaataaat |
153 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||| |||| |||| |||||||| |
|
|
| T |
567 |
atgaatatgtatttaccttcaggccttggcagagcaatggaatggttctcacaagtagctcataagcatcatatataggggaaaagctgaaggaataaat |
468 |
T |
|
| Q |
154 |
tcacccaaccaacacatctaccatgagtaatgagattaacca |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
467 |
tcacccaaccaacacatctaccatgagtaatgagattaacca |
426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1825; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 238 - 316
Target Start/End: Complemental strand, 383 - 307
Alignment:
| Q |
238 |
gcttggatttgcaaaatcttcccaaatagcagaaaatttaaggttgaagtgatgtgaagtaatgaaaaggaagaaaact |
316 |
Q |
| |
|
|||||||| |||||||||||| ||| || |||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
383 |
gcttggatatgcaaaatcttcacaatta--agaaaatttaagtttgaagtgatgtgaagtaatgaaaaggaagaaaact |
307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 110; Significance: 4e-55; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 55 - 195
Target Start/End: Complemental strand, 37634775 - 37634634
Alignment:
| Q |
55 |
atgaatatgtatttacctttaggccttggcagaacaatgaaatgattctcacaagtagctcataagcatcatatatagggg-aaagatgaatgaataaat |
153 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||| |||| |||| |||||||| |
|
|
| T |
37634775 |
atgaatatgtatttaccttcaggccttggcagagcaatggaatggttctcacaagtagctcataagcatcatatataggggaaaagctgaaggaataaat |
37634676 |
T |
|
| Q |
154 |
tcacccaaccaacacatctaccatgagtaatgagattaacca |
195 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37634675 |
tcacccaaccaacacatctaccatgagtaatgagattaacca |
37634634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 238 - 316
Target Start/End: Complemental strand, 37634591 - 37634515
Alignment:
| Q |
238 |
gcttggatttgcaaaatcttcccaaatagcagaaaatttaaggttgaagtgatgtgaagtaatgaaaaggaagaaaact |
316 |
Q |
| |
|
|||||||| |||||||||||| ||| || |||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
37634591 |
gcttggatatgcaaaatcttcacaatta--agaaaatttaagtttgaagtgatgtgaagtaatgaaaaggaagaaaact |
37634515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 268 - 362
Target Start/End: Complemental strand, 3750247 - 3750153
Alignment:
| Q |
268 |
agaaaatttaaggttgaagtgatgtgaagtaatgaaaaggaagaaaactag-gagaaagaaaaattgaaggcttgaatttaggggtaattaggtaa |
362 |
Q |
| |
|
|||||||||||||||||||||||||||||||| | ||| ||||||| | | |||||||| ||||||||||||| |||||| ||||||||||||| |
|
|
| T |
3750247 |
agaaaatttaaggttgaagtgatgtgaagtaacg-aaacaaagaaaaattgtgagaaagagaaattgaaggcttaaatttataggtaattaggtaa |
3750153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 322 - 412
Target Start/End: Complemental strand, 19095528 - 19095438
Alignment:
| Q |
322 |
aaagaaaaattgaaggcttgaatttaggggtaattaggtaagtacttgtaccttgagaaactaaaggttgaaaaatgattttgatctgccg |
412 |
Q |
| |
|
||||| |||||||||||||||||||| |||||||||||||||||| || ||||||||| |||||| ||||| || |||| |||||||| |
|
|
| T |
19095528 |
aaagagaaattgaaggcttgaatttaagggtaattaggtaagtacctgccacttgagaaattaaaggctgaaacgtggttttcatctgccg |
19095438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 3750455 - 3750379
Alignment:
| Q |
55 |
atgaatatgtatttacctttaggccttggcagaacaatgaaatgattctcacaagtagctcataagcatcatatata |
131 |
Q |
| |
|
||||||||||||| ||||| || | |||||||| |||| | || |||||||||||||||||||||||||||||||| |
|
|
| T |
3750455 |
atgaatatgtattcaccttcagactttggcagagtaatggattgtttctcacaagtagctcataagcatcatatata |
3750379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 106; Significance: 9e-53; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 55 - 195
Target Start/End: Complemental strand, 16561809 - 16561668
Alignment:
| Q |
55 |
atgaatatgtatttacctttaggccttggcagaacaatgaaatgattctcacaagtagctcataagcatcatatatagggg-aaagatgaatgaataaat |
153 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||| |||| |||| |||||||| |
|
|
| T |
16561809 |
atgaatatgtatttaccttcaggccttggcagagcaatggaatggttctcacaagtagctcataagcatcatatataggggaaaagttgaaggaataaat |
16561710 |
T |
|
| Q |
154 |
tcacccaaccaacacatctaccatgagtaatgagattaacca |
195 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
16561709 |
tcacccaaccaacacatataccatgagtaatgagattaacca |
16561668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 238 - 421
Target Start/End: Complemental strand, 15606607 - 15606424
Alignment:
| Q |
238 |
gcttggatttgcaaaatcttcccaaatagcagaaaatttaaggttgaagtgatgtgaagtaatgaaaaggaagaaaactaggagaaagaaaaattgaagg |
337 |
Q |
| |
|
|||||||| |||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||| |
|
|
| T |
15606607 |
gcttggatatgcaaaatcttcacaattagtagaaaatttaaggttgaagtgatgtgaagtaatgaaaaggaagaaaactgtgagaaagagaatttgaagg |
15606508 |
T |
|
| Q |
338 |
cttgaatttaggggtaattaggtaagtacttgtaccttgagaaactaaaggttgaaaaatgattttgatctgccgcagaagctc |
421 |
Q |
| |
|
||||||||||| ||||||||||||||||| || ||||||||| |||||| ||||| || |||| |||||||| |||||||| |
|
|
| T |
15606507 |
cttgaatttagaggtaattaggtaagtacctgccacttgagaaattaaaggctgaaacgtggttttcatctgccgtagaagctc |
15606424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 238 - 421
Target Start/End: Complemental strand, 15606959 - 15606776
Alignment:
| Q |
238 |
gcttggatttgcaaaatcttcccaaatagcagaaaatttaaggttgaagtgatgtgaagtaatgaaaaggaagaaaactaggagaaagaaaaattgaagg |
337 |
Q |
| |
|
||||| || |||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||| |
|
|
| T |
15606959 |
gcttgaatatgcaaaatcttcacaattagtagaaaatttaaggttgaagtgatgtgaagtaatgaaaaggaagaaaactgtgagaaagagaatttgaagg |
15606860 |
T |
|
| Q |
338 |
cttgaatttaggggtaattaggtaagtacttgtaccttgagaaactaaaggttgaaaaatgattttgatctgccgcagaagctc |
421 |
Q |
| |
|
||||||||||| ||||||||||||||||| || ||||||||| |||||| ||||| || |||| |||||||| |||||||| |
|
|
| T |
15606859 |
cttgaatttagaggtaattaggtaagtacctgccacttgagaaattaaaggctgaaacgtggttttcatctgccgtagaagctc |
15606776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 55 - 196
Target Start/End: Complemental strand, 15607158 - 15607016
Alignment:
| Q |
55 |
atgaatatgtatttacctttaggccttggcagaacaatgaaatgattctcacaagtagctcataagcatcatatataggggaaa-gatgaatgaataaat |
153 |
Q |
| |
|
|||||||||||||||| || || ||||| ||| ||||| ||||||||||||||||||||||||||||||||||||| |||||| | |||| |||||||| |
|
|
| T |
15607158 |
atgaatatgtatttactttcgggtcttggaagagcaatggaatgattctcacaagtagctcataagcatcatatataagggaaaagctgaaggaataaat |
15607059 |
T |
|
| Q |
154 |
tcacccaaccaacacatctaccatgagtaatgagattaaccac |
196 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15607058 |
tcacccaaccaacacatctaccatgagtaatgagattaaccac |
15607016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 238 - 362
Target Start/End: Complemental strand, 16561625 - 16561501
Alignment:
| Q |
238 |
gcttggatttgcaaaatcttcccaaatagcagaaaatttaaggttgaagtgatgtgaagtaatgaaaaggaagaaaactaggagaaagaaaaattgaagg |
337 |
Q |
| |
|
|||||||| |||||||||||| ||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||| | |||||||| |
|
|
| T |
16561625 |
gcttggatatgcaaaatcttcacaattagcagaaaatttaagtttgaagtgatgtgaagtaataaaaaggaagaaaactgtgagaaagagagattgaagg |
16561526 |
T |
|
| Q |
338 |
cttgaatttaggggtaattaggtaa |
362 |
Q |
| |
|
|||||||||| |||||||| ||||| |
|
|
| T |
16561525 |
cttgaatttatgggtaatttggtaa |
16561501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 196
Target Start/End: Complemental strand, 15606700 - 15606664
Alignment:
| Q |
160 |
aaccaacacatctaccatgagtaatgagattaaccac |
196 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15606700 |
aaccaacacatctaccatgagtaatgagattaaccac |
15606664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 303 - 391
Target Start/End: Original strand, 28987914 - 28988004
Alignment:
| Q |
303 |
aaaggaagaaaactag-gagaaagaaaaattgaaggcttgaatttaggggtaattaggt-aagtacttgtaccttgagaaactaaaggttg |
391 |
Q |
| |
|
||||||||||| || | |||||||| |||||| || |||||||||| |||||||||||| |||||| || ||||||||| ||||||||| |
|
|
| T |
28987914 |
aaaggaagaaagcttgtgagaaagagaaattggagacttgaatttatgggtaattaggtaaagtacctgccacttgagaaattaaaggttg |
28988004 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 106; Significance: 9e-53; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 55 - 195
Target Start/End: Complemental strand, 23493783 - 23493642
Alignment:
| Q |
55 |
atgaatatgtatttacctttaggccttggcagaacaatgaaatgattctcacaagtagctcataagcatcatatatagggg-aaagatgaatgaataaat |
153 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||| |||| |||| |||||||| |
|
|
| T |
23493783 |
atgaatatgtatttaccttcaggccttggcagagcaatggaatggttctcacaagtagctcataagcatcatatataggggaaaagctgaaggaataaat |
23493684 |
T |
|
| Q |
154 |
tcacccaaccaacacatctaccatgagtaatgagattaacca |
195 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
23493683 |
tcacccaaacaacacatctaccatgagtaatgagattaacca |
23493642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 239 - 421
Target Start/End: Complemental strand, 23493598 - 23493415
Alignment:
| Q |
239 |
cttggatttgcaaaatcttcccaaatagcagaaaatttaaggttgaa-gtgatgtgaagtaatgaaaaggaagaaaactaggagaaagaaaaattgaagg |
337 |
Q |
| |
|
||||||| |||||||||||| ||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
23493598 |
cttggatatgcaaaatcttcacaattagcagaaaatttaagtttgaaagtgatgtgaagtaatgaaaaggaagaaaactatgagaaagagaaattgaagg |
23493499 |
T |
|
| Q |
338 |
cttgaatttaggggtaattaggtaagtacttgtaccttgagaaactaaaggttgaaaaatgattttgatctgccgcagaagctc |
421 |
Q |
| |
|
||||||||||||||||||||||||||||| || ||||||||| |||||| | ||| || |||| |||||||| |||||||| |
|
|
| T |
23493498 |
cttgaatttaggggtaattaggtaagtacctgccacttgagaaattaaaggcttaaacgtggtttttatctgccgtagaagctc |
23493415 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 55 - 191
Target Start/End: Original strand, 16250632 - 16250768
Alignment:
| Q |
55 |
atgaatatgtatttacctttaggccttggcagaacaatgaaatgattctcacaagtagctcataagcatcatatataggggaaagatgaatgaataaatt |
154 |
Q |
| |
|
||||||||||||| ||||| || |||||||||||||| || ||||||| |||||||| ||||||| |||||||||||||||||| |||| ||||||||| |
|
|
| T |
16250632 |
atgaatatgtattcaccttcagaacttggcagaacaattaattgattcttacaagtagttcataagaatcatatataggggaaagttgaaagaataaatt |
16250731 |
T |
|
| Q |
155 |
cacccaaccaacacatctaccatgagtaatgagatta |
191 |
Q |
| |
|
|||| | |||| ||||||||||||||||||||||||| |
|
|
| T |
16250732 |
caccgagccaatacatctaccatgagtaatgagatta |
16250768 |
T |
|
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Target: chr3; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 262 - 362
Target Start/End: Original strand, 16250837 - 16250937
Alignment:
| Q |
262 |
aatagcagaaaatttaaggttgaagtgatgtgaagtaatgaaaaggaagaaaactag-gagaaagaaaaattgaaggcttgaatttaggggtaattaggt |
360 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||| ||||||| |||| | | |||||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
16250837 |
aataacagaaaatttaaggttgaagtgatgtgaagtaat-taaaggaaaaaaagttgtgagaaagagaaattgaaggcttgaatttataggtaattaggt |
16250935 |
T |
|
| Q |
361 |
aa |
362 |
Q |
| |
|
|| |
|
|
| T |
16250936 |
aa |
16250937 |
T |
|
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Target: chr8 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 277 - 356
Target Start/End: Complemental strand, 29022731 - 29022652
Alignment:
| Q |
277 |
aaggttgaagtgatgtgaagtaatgaaaaggaagaaaactag-gagaaagaaaaattgaaggcttgaatttaggggtaatt |
356 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||| | | |||||||| ||||||||| |||||||||| |||||||| |
|
|
| T |
29022731 |
aaggttgaagtgatgtgaagtaatg-aaaggaagaaaggttgtgagaaagagaaattgaagacttgaatttatgggtaatt |
29022652 |
T |
|
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Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 322 - 417
Target Start/End: Original strand, 36114637 - 36114732
Alignment:
| Q |
322 |
aaagaaaaattgaaggcttgaatttaggggtaattaggtaagtacttgtaccttgagaaactaaaggttgaaaaatgattttgatctgccgcagaa |
417 |
Q |
| |
|
||||| |||||||||||||||||||| |||||||||||||||| | || ||||| ||| |||||| ||||| || |||| |||||||| |||| |
|
|
| T |
36114637 |
aaagagaaattgaaggcttgaatttaagggtaattaggtaagtgcctgccacttgaaaaattaaaggctgaaacgtggttttcatctgccgtagaa |
36114732 |
T |
|
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