View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8961_low_19 (Length: 489)

Name: NF8961_low_19
Description: NF8961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8961_low_19
NF8961_low_19
[»] chr4 (62 HSPs)
chr4 (1-476)||(28497525-28497988)
chr4 (1-74)||(47611763-47611836)
chr4 (1-73)||(46715546-46715618)
chr4 (3-65)||(31339574-31339636)
chr4 (2-75)||(13805437-13805510)
chr4 (12-76)||(28467333-28467397)
chr4 (4-72)||(54470246-54470314)
chr4 (9-72)||(17900524-17900587)
chr4 (8-75)||(34233196-34233263)
chr4 (1-72)||(53518495-53518566)
chr4 (2-68)||(1380404-1380470)
chr4 (4-74)||(10209073-10209143)
chr4 (26-76)||(28351620-28351670)
chr4 (4-74)||(35555820-35555890)
chr4 (4-73)||(2589029-2589098)
chr4 (4-73)||(25257755-25257824)
chr4 (3-76)||(29398856-29398929)
chr4 (1-65)||(31403200-31403263)
chr4 (1-64)||(50680775-50680839)
chr4 (2-72)||(40933090-40933160)
chr4 (4-66)||(42285881-42285943)
chr4 (2-56)||(45176043-45176097)
chr4 (1-74)||(436265-436338)
chr4 (1-74)||(4440889-4440962)
chr4 (3-60)||(21214767-21214824)
chr4 (39-76)||(21945809-21945846)
chr4 (1-74)||(31959987-31960060)
chr4 (4-73)||(51550422-51550491)
chr4 (1-74)||(52569688-52569761)
chr4 (4-72)||(934611-934679)
chr4 (1-65)||(1427466-1427530)
chr4 (10-74)||(20605242-20605306)
chr4 (8-72)||(31961441-31961505)
chr4 (1-53)||(44860882-44860934)
chr4 (1-64)||(50662423-50662487)
chr4 (1-73)||(51421766-51421838)
chr4 (2-73)||(21879327-21879398)
chr4 (1-72)||(22420889-22420960)
chr4 (1-32)||(31459066-31459097)
chr4 (13-76)||(36799816-36799879)
chr4 (2-65)||(38903902-38903965)
chr4 (1-76)||(45185198-45185273)
chr4 (1-76)||(53707830-53707905)
chr4 (10-72)||(1211565-1211627)
chr4 (5-63)||(17666227-17666285)
chr4 (1-73)||(21107024-21107100)
chr4 (34-72)||(47147442-47147480)
chr4 (2-68)||(49738783-49738849)
chr4 (34-71)||(6478859-6478896)
chr4 (4-73)||(26356658-26356727)
chr4 (3-76)||(29182520-29182593)
chr4 (1-74)||(38570920-38570993)
chr4 (2-63)||(40268447-40268508)
chr4 (1-74)||(43433960-43434033)
chr4 (4-73)||(46372063-46372132)
chr4 (1-74)||(48174266-48174339)
chr4 (1-74)||(56375326-56375399)
chr4 (5-69)||(7682259-7682322)
chr4 (5-73)||(33709964-33710032)
chr4 (9-69)||(37488135-37488195)
chr4 (5-73)||(44360126-44360194)
chr4 (1-73)||(51252635-51252707)
[»] chr7 (50 HSPs)
chr7 (2-76)||(28628104-28628178)
chr7 (1-63)||(42187506-42187568)
chr7 (1-69)||(6420668-6420736)
chr7 (1-76)||(47848710-47848785)
chr7 (1-76)||(48202873-48202948)
chr7 (2-72)||(19262609-19262678)
chr7 (1-69)||(35713731-35713799)
chr7 (2-74)||(39811994-39812066)
chr7 (1-76)||(25579248-25579323)
chr7 (1-76)||(38135384-38135458)
chr7 (3-65)||(12966060-12966122)
chr7 (2-73)||(28021001-28021072)
chr7 (4-74)||(18605319-18605389)
chr7 (4-74)||(18637601-18637671)
chr7 (4-74)||(18651035-18651105)
chr7 (7-76)||(1569058-1569127)
chr7 (4-73)||(5335959-5336028)
chr7 (1-74)||(13859181-13859254)
chr7 (4-73)||(36514381-36514450)
chr7 (4-73)||(48736073-48736142)
chr7 (1-73)||(1740837-1740909)
chr7 (2-73)||(30144812-30144883)
chr7 (1-72)||(30200138-30200209)
chr7 (2-71)||(30633005-30633071)
chr7 (1-72)||(36101940-36102011)
chr7 (1-76)||(43282444-43282518)
chr7 (6-73)||(43791615-43791682)
chr7 (4-71)||(45558401-45558468)
chr7 (1-75)||(40169685-40169759)
chr7 (1-74)||(7273075-7273148)
chr7 (1-74)||(12841448-12841521)
chr7 (1-74)||(33349979-33350052)
chr7 (1-74)||(37617981-37618054)
chr7 (1-74)||(43491344-43491417)
chr7 (12-76)||(5418127-5418191)
chr7 (5-72)||(3457404-3457471)
chr7 (2-61)||(30914654-30914713)
chr7 (1-68)||(41948552-41948619)
chr7 (2-56)||(9797895-9797949)
chr7 (1-74)||(2885895-2885968)
chr7 (35-76)||(27893722-27893763)
chr7 (1-74)||(29650420-29650493)
chr7 (5-74)||(31005263-31005332)
chr7 (1-74)||(35906374-35906447)
chr7 (1-74)||(43281710-43281783)
chr7 (1-74)||(44855345-44855418)
chr7 (1-74)||(45836653-45836726)
chr7 (5-74)||(46356029-46356098)
chr7 (5-72)||(28858084-28858152)
chr7 (21-73)||(38739419-38739470)
[»] chr8 (45 HSPs)
chr8 (1-76)||(16917220-16917294)
chr8 (10-76)||(29520695-29520761)
chr8 (1-76)||(30559729-30559804)
chr8 (1-61)||(79079-79139)
chr8 (2-68)||(9695668-9695734)
chr8 (3-76)||(43904836-43904909)
chr8 (1-65)||(30748493-30748557)
chr8 (4-76)||(36143404-36143476)
chr8 (28-76)||(38178431-38178479)
chr8 (1-69)||(42584407-42584475)
chr8 (10-69)||(29645082-29645141)
chr8 (2-76)||(29700313-29700387)
chr8 (26-75)||(5908707-5908756)
chr8 (8-73)||(32043633-32043698)
chr8 (5-69)||(39953442-39953506)
chr8 (10-65)||(10080089-10080144)
chr8 (9-76)||(35914772-35914839)
chr8 (1-76)||(36545185-36545260)
chr8 (5-76)||(41971949-41972020)
chr8 (2-76)||(7046371-7046444)
chr8 (10-76)||(30198437-30198503)
chr8 (40-73)||(7531818-7531851)
chr8 (8-73)||(16351421-16351486)
chr8 (10-71)||(25985776-25985837)
chr8 (3-76)||(32930999-32931072)
chr8 (5-74)||(36395122-36395191)
chr8 (40-73)||(45331742-45331775)
chr8 (1-76)||(10824335-10824410)
chr8 (26-65)||(38327996-38328035)
chr8 (5-72)||(39051182-39051249)
chr8 (3-70)||(45512672-45512739)
chr8 (4-58)||(17491810-17491864)
chr8 (30-76)||(35362821-35362867)
chr8 (40-74)||(38409195-38409229)
chr8 (5-74)||(11523896-11523965)
chr8 (1-74)||(12491311-12491384)
chr8 (1-74)||(39946893-39946966)
chr8 (5-74)||(40813364-40813433)
chr8 (1-74)||(42854177-42854250)
chr8 (2-54)||(2776422-2776474)
chr8 (1-69)||(3079781-3079848)
chr8 (2-70)||(16715310-16715378)
chr8 (36-76)||(24558558-24558598)
chr8 (36-76)||(38668100-38668140)
chr8 (5-73)||(39760602-39760670)
[»] chr5 (39 HSPs)
chr5 (2-76)||(11675547-11675621)
chr5 (4-72)||(42199325-42199393)
chr5 (1-76)||(43475276-43475351)
chr5 (4-74)||(2712983-2713053)
chr5 (4-76)||(41109911-41109983)
chr5 (5-76)||(7359431-7359501)
chr5 (1-76)||(21093788-21093863)
chr5 (5-75)||(79553-79623)
chr5 (13-71)||(14667819-14667877)
chr5 (3-76)||(15489663-15489736)
chr5 (1-65)||(18351089-18351154)
chr5 (2-76)||(9917621-9917695)
chr5 (7-73)||(21952399-21952465)
chr5 (4-70)||(31636097-31636163)
chr5 (4-74)||(38578694-38578764)
chr5 (4-73)||(14749346-14749415)
chr5 (1-73)||(27249256-27249326)
chr5 (4-68)||(9235103-9235167)
chr5 (5-76)||(15986908-15986979)
chr5 (5-68)||(23979986-23980049)
chr5 (3-73)||(4460246-4460316)
chr5 (3-69)||(41833760-41833826)
chr5 (1-74)||(2075647-2075720)
chr5 (1-74)||(4496420-4496493)
chr5 (2-63)||(7678520-7678581)
chr5 (4-55)||(4026527-4026578)
chr5 (1-76)||(6889029-6889104)
chr5 (4-75)||(28676634-28676705)
chr5 (1-76)||(32516592-32516667)
chr5 (4-74)||(1525683-1525753)
chr5 (4-46)||(33667255-33667297)
chr5 (1-74)||(1287752-1287825)
chr5 (1-74)||(12492557-12492630)
chr5 (1-74)||(17340609-17340682)
chr5 (1-74)||(24178546-24178619)
chr5 (1-74)||(26884861-26884934)
chr5 (5-74)||(38501591-38501660)
chr5 (1-74)||(38685003-38685076)
chr5 (3-68)||(43558006-43558071)
[»] chr2 (43 HSPs)
chr2 (1-77)||(43752117-43752193)
chr2 (1-76)||(3481177-3481252)
chr2 (1-73)||(43260440-43260512)
chr2 (1-76)||(12141580-12141655)
chr2 (2-76)||(26850272-26850346)
chr2 (1-70)||(12026182-12026251)
chr2 (4-73)||(42543274-42543343)
chr2 (7-76)||(45077797-45077866)
chr2 (1-65)||(13240927-13240991)
chr2 (8-76)||(38434995-38435063)
chr2 (5-73)||(42092557-42092625)
chr2 (1-76)||(42149817-42149892)
chr2 (1-72)||(43832134-43832205)
chr2 (1-73)||(37481791-37481863)
chr2 (1-76)||(6219003-6219078)
chr2 (1-76)||(9556540-9556615)
chr2 (14-76)||(18958960-18959022)
chr2 (3-76)||(7825398-7825471)
chr2 (1-74)||(24583805-24583878)
chr2 (6-65)||(3305962-3306021)
chr2 (19-73)||(19235158-19235212)
chr2 (12-70)||(23714438-23714496)
chr2 (12-70)||(24102110-24102168)
chr2 (1-73)||(11412757-11412827)
chr2 (1-74)||(12734735-12734808)
chr2 (5-73)||(9647783-9647851)
chr2 (14-62)||(19337039-19337087)
chr2 (3-74)||(8180818-8180889)
chr2 (4-63)||(9578887-9578946)
chr2 (10-65)||(36819221-36819276)
chr2 (4-50)||(18188819-18188865)
chr2 (1-74)||(451821-451894)
chr2 (1-74)||(3866108-3866181)
chr2 (36-73)||(14255660-14255697)
chr2 (1-74)||(25834717-25834790)
chr2 (43-76)||(33287495-33287528)
chr2 (26-71)||(37470309-37470354)
chr2 (1-74)||(38429920-38429993)
chr2 (1-73)||(38860209-38860286)
chr2 (1-74)||(41763215-41763288)
chr2 (10-74)||(7326333-7326397)
chr2 (1-73)||(26784514-26784586)
chr2 (10-74)||(33594445-33594509)
[»] chr1 (54 HSPs)
chr1 (1-76)||(40416407-40416482)
chr1 (1-76)||(48431577-48431652)
chr1 (3-76)||(5338762-5338835)
chr1 (4-76)||(2544638-2544710)
chr1 (2-73)||(10569241-10569312)
chr1 (1-72)||(14226004-14226075)
chr1 (5-72)||(19908214-19908281)
chr1 (1-76)||(32404697-32404772)
chr1 (5-76)||(35828721-35828792)
chr1 (1-71)||(43423755-43423825)
chr1 (4-73)||(40419678-40419747)
chr1 (2-61)||(17275233-17275292)
chr1 (3-74)||(27847978-27848049)
chr1 (17-76)||(43375758-43375817)
chr1 (5-71)||(15577461-15577527)
chr1 (3-75)||(27704048-27704118)
chr1 (7-71)||(13827746-13827810)
chr1 (2-73)||(43954236-43954301)
chr1 (10-73)||(17640227-17640290)
chr1 (2-73)||(46388413-46388484)
chr1 (1-71)||(990635-990705)
chr1 (11-73)||(4590701-4590763)
chr1 (7-73)||(50771730-50771795)
chr1 (1-74)||(1210781-1210854)
chr1 (4-73)||(3819030-3819099)
chr1 (8-65)||(12231408-12231465)
chr1 (1-74)||(25979404-25979477)
chr1 (4-73)||(29807905-29807974)
chr1 (1-74)||(34792522-34792595)
chr1 (2-71)||(39140557-39140626)
chr1 (40-73)||(43898304-43898337)
chr1 (1-74)||(51602092-51602165)
chr1 (1-74)||(52561762-52561835)
chr1 (2-58)||(16822211-16822267)
chr1 (1-53)||(17815508-17815560)
chr1 (4-72)||(23791819-23791887)
chr1 (5-77)||(36339973-36340045)
chr1 (5-76)||(8796249-8796320)
chr1 (26-73)||(33561032-33561079)
chr1 (2-73)||(38868919-38868990)
chr1 (14-73)||(39422217-39422276)
chr1 (19-73)||(46394874-46394928)
chr1 (2-59)||(853973-854030)
chr1 (1-74)||(8671954-8672027)
chr1 (1-74)||(9509354-9509427)
chr1 (1-74)||(9592770-9592843)
chr1 (3-76)||(11584081-11584154)
chr1 (4-65)||(27637815-27637876)
chr1 (4-73)||(28528394-28528463)
chr1 (1-74)||(32231127-32231200)
chr1 (1-74)||(43240552-43240625)
chr1 (5-74)||(52832085-52832154)
chr1 (5-73)||(19969367-19969435)
chr1 (1-73)||(42501144-42501216)
[»] chr6 (18 HSPs)
chr6 (1-74)||(9593879-9593952)
chr6 (7-76)||(579460-579529)
chr6 (7-76)||(6293557-6293626)
chr6 (1-69)||(24665846-24665915)
chr6 (4-76)||(14389339-14389411)
chr6 (4-67)||(34676-34739)
chr6 (1-76)||(31832030-31832105)
chr6 (1-73)||(2079376-2079448)
chr6 (1-69)||(6907005-6907073)
chr6 (17-72)||(21870240-21870295)
chr6 (2-73)||(32913436-32913507)
chr6 (38-76)||(4948475-4948513)
chr6 (38-76)||(4955446-4955484)
chr6 (1-74)||(5258321-5258394)
chr6 (12-76)||(5897524-5897588)
chr6 (5-60)||(7150508-7150563)
chr6 (3-56)||(33997733-33997786)
chr6 (5-65)||(9749406-9749466)
[»] chr3 (37 HSPs)
chr3 (1-74)||(39235174-39235247)
chr3 (3-76)||(39600852-39600925)
chr3 (1-76)||(45289262-45289337)
chr3 (4-72)||(21200587-21200655)
chr3 (1-76)||(42510187-42510260)
chr3 (2-77)||(46431845-46431918)
chr3 (1-73)||(54128414-54128486)
chr3 (5-76)||(30572970-30573040)
chr3 (1-76)||(42026707-42026782)
chr3 (5-74)||(19737037-19737106)
chr3 (5-74)||(19757940-19758009)
chr3 (10-75)||(33755514-33755579)
chr3 (1-74)||(48508271-48508344)
chr3 (1-65)||(36820143-36820207)
chr3 (4-76)||(41842682-41842754)
chr3 (8-76)||(50249430-50249498)
chr3 (1-72)||(48734310-48734381)
chr3 (2-76)||(3870615-3870689)
chr3 (4-72)||(29374973-29375041)
chr3 (9-72)||(7278504-7278567)
chr3 (4-67)||(34719252-34719315)
chr3 (3-73)||(31261115-31261185)
chr3 (19-73)||(43308617-43308671)
chr3 (4-69)||(11581483-11581548)
chr3 (4-69)||(37598347-37598412)
chr3 (1-74)||(38430884-38430957)
chr3 (5-73)||(36304018-36304086)
chr3 (38-69)||(14783634-14783665)
chr3 (33-76)||(44571507-44571550)
chr3 (4-75)||(46568145-46568216)
chr3 (2-72)||(2968248-2968318)
chr3 (42-76)||(23534741-23534775)
chr3 (3-72)||(659563-659632)
chr3 (8-73)||(31454401-31454466)
chr3 (1-42)||(52138836-52138877)
chr3 (2-74)||(19676253-19676325)
chr3 (3-76)||(54365146-54365221)
[»] scaffold0018 (2 HSPs)
scaffold0018 (1-76)||(44039-44114)
scaffold0018 (1-74)||(31504-31577)
[»] scaffold0003 (1 HSPs)
scaffold0003 (2-73)||(346947-347018)
[»] scaffold0325 (1 HSPs)
scaffold0325 (2-73)||(11835-11905)
[»] scaffold0050 (1 HSPs)
scaffold0050 (4-68)||(45607-45671)


Alignment Details
Target: chr4 (Bit Score: 403; Significance: 0; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 403; E-Value: 0
Query Start/End: Original strand, 1 - 476
Target Start/End: Original strand, 28497525 - 28497988
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggatacaggataaacttataaacaaacca 100  Q
    |||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28497525 aggcttaggtggtttgggcatgtagagagaagacttgtagattatgtagtaaggagagtagatcagatggaggatacaggataaacttataaacaaacca 28497624  T
Q  101 ttgtccaaaagcaaacaaaggatatgtagagaaccatttagagcatcctctcatcaatattttcttgtccttcctctctgcacggattttccccctctta 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  28497625 ttgtccaaaagcaaacaaaggatatgtagagaaccatttagagcatcctctcatcaatattttctcgtccttcctctctgcacagattttccccctctta 28497724  T
Q  201 ttgagctccaacccctcatcatcgccaacaaactatccgattctcaacagtaatttaccacttgaactttaagtggggccataaccaagtcatctggtgc 300  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28497725 ttgagctccaactcctcatcatcgccaacaaactatccgattctcaacagtaatttaccacttgaactttaagtggggccatacccaagtcatctggtgc 28497824  T
Q  301 aagcacctaagtgaattggagctatccaacctatgtttgctttctgatgttatctggcacttgttgagtattataatttatactaccttagcctctctgt 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  28497825 aagcacctaagtgaattggagctatccaacctatgtttgctttctgatgttatctggcacttgttgagtattataatttatactaccttagcctctctg- 28497923  T
Q  401 tttctgatgttagctgccgtgacaacacttcagccactgttagtcccgttcaattactccaagaacttgtttgatg 476  Q
               |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28497924 -----------agctgccgtgacaacacttcagccactgttagccccgttcaattactccaagaacttgtttgatg 28497988  T

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Target: chr4; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 47611763 - 47611836
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||||||||||||||||||| ||||||| |||  ||||| |||| ||||||||||| |||||||||||||    
T  47611763 aggcttaggtggtttgggcatgtagagagaagacctagagattttgtaataaggagagtaaatcagatggagga 47611836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 46715618 - 46715546
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||||||| |||||||||| ||||||| | ||| |||||||||| ||||||||||||||| |||||||    
T  46715618 aggcttaggtggtgtgggcatgtagagagaagacatgtggattatgtagcaaggagagtagatcatatggagg 46715546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 31339574 - 31339636
Alignment:
Q  3 gcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatca 65  Q
    |||||||||||||| ||||||| ||||||| | |||||||||||||||||||| |||||||||    
T  31339574 gcttaggtggtttgagcatgtagagagaagacttgtagattatgtagtaaggatagtagatca 31339636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 13805510 - 13805437
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggat 75  Q
    ||||||||||||||||| ||||| ||||||| ||| |||||| ||||| ||||||| ||||||| |||||||||    
T  13805510 ggcttaggtggtttgggtatgtagagagaagacctttagattttgtagcaaggagactagatcacatggaggat 13805437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 28467333 - 28467397
Alignment:
Q  12 gtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||||| |||||| ||||||||||| |||| ||| |||||||||||||||||| ||||    
T  28467333 gtttgggcatgtagagagaacgcctgtagattttgtattaaagagagtagatcagatggacgata 28467397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 54470246 - 54470314
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggag 72  Q
    |||| |||||||||||||||| ||||||| | |||| |||||||||||||||||||| |||| ||||||    
T  54470246 cttaagtggtttgggcatgtagagagaagacatgtaaattatgtagtaaggagagtaaatcaaatggag 54470314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 17900524 - 17900587
Alignment:
Q  9 gtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggag 72  Q
    |||||||||||| ||| ||||||| ||||| ||||||||||  |||||||||||||||||||||    
T  17900524 gtggtttgggcacgtagagagaagacctgtggattatgtagataggagagtagatcagatggag 17900587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 75
Target Start/End: Complemental strand, 34233263 - 34233196
Alignment:
Q  8 ggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggat 75  Q
    |||||||||| |||||| |||||   | |||||||||||||||||||||||||||| |||||||||||    
T  34233263 ggtggtttggacatgtagagagagaacatgtagattatgtagtaaggagagtagatgagatggaggat 34233196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 53518566 - 53518495
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggag 72  Q
    |||||||||||||||||| ||||| ||||||| ||||| |||  ||||||| | ||||||||||||||||||    
T  53518566 aggcttaggtggtttgggtatgtagagagaagacctgtggatgctgtagtacgaagagtagatcagatggag 53518495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 1380404 - 1380470
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagat 68  Q
    ||||||||||||||||||| ||| ||||||  |||||||||| ||||||||||| ||||||| ||||    
T  1380404 ggcttaggtggtttgggcacgtagagagaaaacctgtagattttgtagtaaggacagtagattagat 1380470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 10209073 - 10209143
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    ||||| |||||||||||||||  |||||| |||||  ||| | ||||||||||||||||||||||||||||    
T  10209073 cttagttggtttgggcatgtagcgagaagacctgtgaattttttagtaaggagagtagatcagatggagga 10209143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 28351620 - 28351670
Alignment:
Q  26 agagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||| |||||||| | ||||||||||||||||||||||||||||||||    
T  28351620 agagaagacctgtagactctgtagtaaggagagtagatcagatggaggata 28351670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 35555890 - 35555820
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||||||||||||| || ||||||| ||||| |||| |||||| |||||||||||| |||| |||||    
T  35555890 cttaggtggtttgggcatttagagagaagacctgtggattctgtagttaggagagtagattagatagagga 35555820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 2589029 - 2589098
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||||||||||| |||||||| ||||||  | ||| |||| |||||| ||||||||||||||||||||||    
T  2589029 cttaggtggtttaggcatgtagagagaaaacttgtggattctgtagttaggagagtagatcagatggagg 2589098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 25257824 - 25257755
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||||||| ||||||| ||||||| |||||  ||  ||| |||||||||||||||||||||||||    
T  25257824 cttaggtggtttgagcatgtagagagaagacctgtgaatgctgttgtaaggagagtagatcagatggagg 25257755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 29398856 - 29398929
Alignment:
Q  3 gcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||| |||||||||||||||| ||||||| ||| |||||| |||||| ||||||||||| | ||| |||||||    
T  29398856 gcttatgtggtttgggcatgtagagagaagacctatagattctgtagtgaggagagtagaccggatagaggata 29398929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 31403263 - 31403200
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatca 65  Q
    |||||||||||||| ||||||||||||||||  |||| |||||||||||||  ||||||||||||    
T  31403263 aggcttaggtggtt-gggcatgtaaagagaacacctgaagattatgtagtatagagagtagatca 31403200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 50680775 - 50680839
Alignment:
Q  1 aggcttaggtggtttg-ggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatc 64  Q
    |||||||||||||||  |||||||| ||||||||| ||||||||  |||||||||||||||||||    
T  50680775 aggcttaggtggtttatggcatgtagagagaaggcttgtagattccgtagtaaggagagtagatc 50680839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 40933160 - 40933090
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggag 72  Q
    |||||||||||||||| ||| || ||| ||| ||| |||||| || ||||| |||||||||||||||||||    
T  40933160 ggcttaggtggtttggacatttagagaaaagacctatagattctgcagtaaagagagtagatcagatggag 40933090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 42285943 - 42285881
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcag 66  Q
    ||||||||||||||||||||| ||||||| ||||| |||| |||||| || |||| |||||||    
T  42285943 cttaggtggtttgggcatgtatagagaagacctgtggattctgtagtcagaagagcagatcag 42285881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 45176043 - 45176097
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggag 56  Q
    ||||||||||||||||||||||| ||||||| | |||||||| || |||||||||    
T  45176043 ggcttaggtggtttgggcatgtagagagaagacttgtagattttgaagtaaggag 45176097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 436265 - 436338
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| || |||||||||||| ||||||| |||||||||   || ||||| ||||||||||| ||||||||    
T  436265 aggcttagatgatttgggcatgtagagagaagacctgtagatgccgtggtaagaagagtagatcaaatggagga 436338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 4440889 - 4440962
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| |||||||||||| || ||||||| || ||||||  ||| ||||| ||||||||||| ||||||||    
T  4440889 aggcttagatggtttgggcatctagagagaagacccgtagatgctgtggtaagaagagtagatcaaatggagga 4440962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 21214824 - 21214767
Alignment:
Q  3 gcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagta 60  Q
    |||||||||||||||||||||| ||||||| | |||  ||| ||||||||||||||||    
T  21214824 gcttaggtggtttgggcatgtagagagaagacttgttaattctgtagtaaggagagta 21214767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 76
Target Start/End: Complemental strand, 21945846 - 21945809
Alignment:
Q  39 agattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  21945846 agattctgtagtaaggagagtagatcagatggaggata 21945809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 31960060 - 31959987
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||||||||||| ||||||| || ||||||   || ||||| ||||||||||| ||||||||    
T  31960060 aggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggagga 31959987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 51550491 - 51550422
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||||||||||||||| |||||||   ||| |||| | ||| ||||||||| |||||||||||||    
T  51550491 cttaggtggtttgggcatgtagagagaagatatgtggattctctagcaaggagagttgatcagatggagg 51550422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 52569761 - 52569688
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||||||||||| ||||||| || ||||||   || ||||| ||||||||||| ||||||||    
T  52569761 aggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggagga 52569688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 934679 - 934611
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggag 72  Q
    ||||||||||||||||| ||| |||| || ||| ||||||  ||||||||||  |||||||||||||||    
T  934679 cttaggtggtttgggcaagtagagaggagacctctagattgcgtagtaaggaaggtagatcagatggag 934611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 1427530 - 1427466
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatca 65  Q
    |||||||| ||||||| ||||||| ||||| | ||||| |||| ||| |||||||||||||||||    
T  1427530 aggcttagatggtttgagcatgtagagagaggacctgtggattttgtggtaaggagagtagatca 1427466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 20605242 - 20605306
Alignment:
Q  10 tggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    ||||||||||||||| |||||||  ||||||||| ||| |||||||||||| ||||  |||||||    
T  20605242 tggtttgggcatgtagagagaagagctgtagattctgtggtaaggagagtatatcaagtggagga 20605306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 31961505 - 31961441
Alignment:
Q  8 ggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggag 72  Q
    ||||||||||||||||| ||||||| | ||| |||| |||||| |||||||| ||| ||||||||    
T  31961505 ggtggtttgggcatgtagagagaagacttgtggattctgtagttaggagagtggattagatggag 31961441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 44860882 - 44860934
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaag 53  Q
    |||||||| ||||||||||||||| |||||||  ||||||||| |||||||||    
T  44860882 aggcttagatggtttgggcatgtatagagaagagctgtagattttgtagtaag 44860934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 50662423 - 50662487
Alignment:
Q  1 aggcttaggtggttt-gggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatc 64  Q
    ||||||||||||||| ||||||||| ||||||| | |||||||| | | ||||||||||||||||    
T  50662423 aggcttaggtggttttgggcatgtagagagaagacttgtagattctattgtaaggagagtagatc 50662487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 51421766 - 51421838
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||||||||||||||| || ||||||| || ||||||  |||| || | ||||||||||| |||||||    
T  51421766 aggcttaggtggtttgggcatatacagagaagaccggtagatgttgtaatacgaagagtagatcaaatggagg 51421838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 21879398 - 21879327
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||| |||||| |||| | ||||||| | |||||||| | ||||||||||| ||||| |||||||||    
T  21879398 ggcttaggtagtttggacatgcatagagaagacatgtagattctttagtaaggagaatagattagatggagg 21879327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 22420960 - 22420889
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggag 72  Q
    ||||||||||| ||||| |||||| |||||||  ||| ||||| |||| |||| ||||||||| ||||||||    
T  22420960 aggcttaggtgatttggacatgtagagagaagatctgaagattttgtaataagaagagtagataagatggag 22420889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 31459066 - 31459097
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaag 32  Q
    ||||||||||||||||||||||||||||||||    
T  31459066 aggcttaggtggtttgggcatgtaaagagaag 31459097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 36799879 - 36799816
Alignment:
Q  13 tttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||| ||||||  ||| ||||||  |||||||||||||||||||| ||| ||||||    
T  36799879 tttgggcatgtagagagaaaacctatagattcggtagtaaggagagtagatcaaatgaaggata 36799816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 65
Target Start/End: Complemental strand, 38903965 - 38903902
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatca 65  Q
    ||||||| ||||||| ||||||  ||||||| | |||||||| ||||||| |||||||||||||    
T  38903965 ggcttagttggtttgagcatgtggagagaagacttgtagattttgtagtatggagagtagatca 38903902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 45185273 - 45185198
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||| ||||||||| || ||| ||| | |||||||| ||||||||| |||||| || ||||||| ||||    
T  45185273 aggcttaggtgatttgggcatatagagacaagacttgtagattttgtagtaagaagagtatatgagatggaagata 45185198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 53707830 - 53707905
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||| ||||||||||||||| ||||||| || ||||||   || ||||| |||||| |||| ||||||||||    
T  53707830 aggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaagagtatatcaaatggaggata 53707905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 1211627 - 1211565
Alignment:
Q  10 tggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggag 72  Q
    ||||||||| ||||| ||||||| ||| |||||  ||| ||||| ||||||||||||||||||    
T  1211627 tggtttgggaatgtagagagaagacctatagatattgtcgtaagaagagtagatcagatggag 1211565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 17666285 - 17666227
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagat 63  Q
    ||||||||||||| |||||| || |||  | |||||||||||||||||| |||||||||    
T  17666285 ttaggtggtttggacatgtagagggaaaacatgtagattatgtagtaagaagagtagat 17666227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 21107024 - 21107100
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcc---tgtagattatgtagtaaggagagtagatc-agatggagg 73  Q
    |||||||||| |||||||||| || ||||||| |    |||||||||||||||||||||||| |||| |||||||||    
T  21107024 aggcttaggtagtttgggcatctagagagaagacgacttgtagattatgtagtaaggagagtggatcaagatggagg 21107100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 34 - 72
Target Start/End: Original strand, 47147442 - 47147480
Alignment:
Q  34 cctgtagattatgtagtaaggagagtagatcagatggag 72  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  47147442 cctgtggattatgtagtaaggagagtaaatcagatggag 47147480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 49738849 - 49738783
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagat 68  Q
    |||||||||| |||| || |||||||||||| ||  |||||| |||| ||||||||||| |||||||    
T  49738849 ggcttaggtgatttgagcgtgtaaagagaagacccatagattttgtactaaggagagtaaatcagat 49738783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 71
Target Start/End: Complemental strand, 6478896 - 6478859
Alignment:
Q  34 cctgtagattatgtagtaaggagagtagatcagatgga 71  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  6478896 cctgtggattatgtagttaggagagtagatcagatgga 6478859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 26356658 - 26356727
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||||||||||||||||  || ||||||| | ||| | |  |||||||||||||||||||| ||||||||    
T  26356658 cttaggtggtttgggcacttagagagaagacatgtgggtattgtagtaaggagagtagatcggatggagg 26356727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 29182520 - 29182593
Alignment:
Q  3 gcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||||| |||||||| ||||||  || ||||||| ||| ||||||| || |||||| ||||| ||||    
T  29182520 gcttaggtggtttaggcatgtagagagaaaaccggtagattctgtggtaaggaaagcagatcatatggatgata 29182593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 38570993 - 38570920
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||||||||||||||||||| | ||||| | ||| ||||   | ||||||| | ||||||||||||||||    
T  38570993 aggcttaggtggtttgggcatgtagaaagaagacatgtggattccatcgtaaggacaatagatcagatggagga 38570920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 40268508 - 40268447
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagat 63  Q
    ||||| ||||| ||||||||||| ||||||| ||||||||||  |||  |||||||||||||    
T  40268508 ggctttggtggcttgggcatgtagagagaagacctgtagattccgtataaaggagagtagat 40268447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43433960 - 43434033
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||||||||||| ||||||| || ||||||   || ||||| |||||| |||| ||||||||    
T  43433960 aggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaagagtaaatcaaatggagga 43434033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 46372063 - 46372132
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||||||| ||||||| ||||||| | ||| |||| |||| |||| |||| ||||||||| ||||    
T  46372063 cttaggtggtttgtgcatgtagagagaagacatgtggattctgtactaagaagagcagatcagatagagg 46372132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 48174339 - 48174266
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| || |||||||||||| ||||||| || ||||||   || ||||| ||||||||||| ||||||||    
T  48174339 aggcttagatgatttgggcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggagga 48174266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 56375326 - 56375399
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||||||||||| ||||||| || ||||||   || ||||| ||||||||| | ||||||||    
T  56375326 aggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaagagtagataaaatggagga 56375399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 7682322 - 7682259
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatg 69  Q
    |||||||||||| | ||| | ||||||| || ||||||||||||||||||| ||||||| |||||    
T  7682322 ttaggtggtttgagtatgcagagagaagacc-gtagattatgtagtaaggaaagtagataagatg 7682259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 33709964 - 33710032
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||||| |||||||  |||||||  |||| |||| |||||||| |||||| ||||||| |||||    
T  33709964 ttaggtggtttaggcatgtggagagaagaactgtggattctgtagtaaagagagtggatcagaaggagg 33710032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 37488135 - 37488195
Alignment:
Q  9 gtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatg 69  Q
    |||||| ||||||||| | ||||| || ||||||  ||||||| |||||||||||||||||    
T  37488135 gtggttcgggcatgtagatagaagaccggtagatgttgtagtagggagagtagatcagatg 37488195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 44360126 - 44360194
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||||| ||||||||||||| ||||||| | ||| ||  |||||||||||| | ||||||| |||||||    
T  44360126 ttaggttgtttgggcatgtagagagaagacatgtggacgatgtagtaaggataatagatcatatggagg 44360194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 51252707 - 51252635
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||||||| |||||||||| ||||||| | ||| |||| | | | ||||||||||| ||| |||||||    
T  51252707 aggcttaggtggtatgggcatgtagagagaagacatgtggattctatggcaaggagagtaggtcaaatggagg 51252635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 3e-27; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 28628178 - 28628104
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||    
T  28628178 ggcttaggtggtttgggcatgtaaagagaaaacctgtagattatgtagtaaggagagtagatccgatggaggata 28628104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 42187506 - 42187568
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagat 63  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42187506 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagat 42187568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 6420736 - 6420668
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatg 69  Q
    |||||||||||||||||||||||| ||||||| | |||||||  |||||||||||||||||||||||||    
T  6420736 aggcttaggtggtttgggcatgtagagagaagacttgtagatactgtagtaaggagagtagatcagatg 6420668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 47848710 - 47848785
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||||||||||||||  ||||||| | |||| ||| |||| |||||||||||||||||||||||||||    
T  47848710 aggcttaggtggtttgggcatgtcgagagaagacttgtaaattctgtactaaggagagtagatcagatggaggata 47848785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 48202948 - 48202873
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||||||| ||||||| ||||||| | |||||||| ||||||||||||||||||||| |||| |||||    
T  48202948 aggcttaggtggtttgcgcatgtagagagaagacttgtagattctgtagtaaggagagtagatcatatggtggata 48202873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 19262678 - 19262609
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggag 72  Q
    ||||||||||||||| ||||||| ||||||| |||||||||| ||||||||| ||||||||||||||||||    
T  19262678 ggcttaggtggtttgagcatgtagagagaagacctgtagatt-tgtagtaagaagagtagatcagatggag 19262609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 35713731 - 35713799
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatg 69  Q
    |||||||||||||||||||||||| ||||||| | |||| ||| |||||||||||||||||||| ||||    
T  35713731 aggcttaggtggtttgggcatgtagagagaagacttgtacattttgtagtaaggagagtagatctgatg 35713799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 39811994 - 39812066
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    ||||||||| ||||||||||||| |||||||   |||||||| | ||||||||||||||||||||||||||||    
T  39811994 ggcttaggtagtttgggcatgtagagagaagagatgtagattctatagtaaggagagtagatcagatggagga 39812066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 25579323 - 25579248
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||||||||| ||||| ||||||| | |||||||| ||| ||||| ||||||||| ||||||||||||    
T  25579323 aggcttaggtggtttggggatgtagagagaagacatgtagattctgtggtaagaagagtagattagatggaggata 25579248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 38135458 - 38135384
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||||||||| |||||| | ||||| || ||||||| ||||||||||||| ||||||||||||||||||    
T  38135458 aggcttaggtggtttggacatgtagacagaagaccagtagattttgtagtaaggaga-tagatcagatggaggata 38135384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 12966060 - 12966122
Alignment:
Q  3 gcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatca 65  Q
    |||||||||||||||||||||| ||||||| || ||| ||| |||||||||||||||||||||    
T  12966060 gcttaggtggtttgggcatgtagagagaagacccgtaaattctgtagtaaggagagtagatca 12966122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 28021001 - 28021072
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||||||||||||||||| |||||||   ||||| || |||| |||||||||||||| |||||||||    
T  28021001 ggcttaggtggtttgggcatgtagagagaagatttgtaggttctgtaataaggagagtagattagatggagg 28021072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 18605389 - 18605319
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    ||||||||||||| ||||||| ||||||| | |||||||||| |||| |||||| |||||||||| |||||    
T  18605389 cttaggtggtttgagcatgtagagagaagacatgtagattatatagttaggagattagatcagatcgagga 18605319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 18637601 - 18637671
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    ||||||||||||| ||||||| ||||||| | |||||||||| |||| |||||| |||||||||| |||||    
T  18637601 cttaggtggtttgagcatgtagagagaagacatgtagattatatagttaggagattagatcagatcgagga 18637671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 18651035 - 18651105
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    ||||||||||||| ||||||| ||||||| | |||||||||| |||| |||||| |||||||||| |||||    
T  18651035 cttaggtggtttgagcatgtagagagaagacatgtagattatatagttaggagattagatcagatcgagga 18651105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 1569058 - 1569127
Alignment:
Q  7 aggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||| ||||| ||||||| ||||||| | |||||||  ||||| ||||||||||||||||||||||||||    
T  1569058 aggttgtttgagcatgtagagagaagtcgtgtagatgttgtagaaaggagagtagatcagatggaggata 1569127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 5335959 - 5336028
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||||||||||||||||| || |||||||  |||| |||| |||||| |||||||||||| |||||||||    
T  5335959 cttaggtggtttgggcatatagagagaagaactgtggattctgtagttaggagagtagattagatggagg 5336028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 13859254 - 13859181
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||||||||||| ||||||| || ||||||  ||| ||||| ||||||||||| ||||||||    
T  13859254 aggcttagatggtttgggcatgtagagagaagacccgtagatgctgtcgtaagaagagtagatcaaatggagga 13859181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 36514450 - 36514381
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||||||||||||||| ||||| | | ||| |||| ||||||| |||||||||||||||| ||||    
T  36514450 cttaggtggtttgggcatgtagagagacgacttgtggattctgtagtatggagagtagatcagatagagg 36514381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 48736142 - 48736073
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||||||||||||  |||||| || |||| ||||| ||||||||||| |||||||||||||| |||||||    
T  48736142 cttaggtggtttgctcatgtagagcgaagacctgtggattatgtagttaggagagtagatcaaatggagg 48736073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 1740837 - 1740909
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||||||||||||||||| ||||| | || ||   ||| |||| |||||||||||||||||||||||||||||    
T  1740837 aggcttaggtggtttgggtatgtagataggagaattgtggattttgtagtaaggagagtagatcagatggagg 1740909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 30144812 - 30144883
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||| ||||||||| ||| ||||||| | |||||||| | ||||| | |||||||||||||||||||    
T  30144812 ggcttaggtagtttgggcaggtagagagaagacttgtagattctatagtacgaagagtagatcagatggagg 30144883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 30200209 - 30200138
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggag 72  Q
    ||||||||||| ||| |||||||||| ||||| |||  |||||||||||||||||||  | |||||||||||    
T  30200209 aggcttaggtgattttggcatgtaaatagaagacctcgagattatgtagtaaggagatcatatcagatggag 30200138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 30633005 - 30633071
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatgga 71  Q
    ||||||| ||||||||||||||| |||||||   ||| |||| ||||||||||||||||||| |||||||    
T  30633005 ggcttagatggtttgggcatgtagagagaag---tgtggattctgtagtaaggagagtagattagatgga 30633071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 36102011 - 36101940
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggag 72  Q
    |||||||||||||||||| ||||| ||||||| ||| |||||| ||||  | ||||||||||||| ||||||    
T  36102011 aggcttaggtggtttggggatgtagagagaagacctatagattttgtaacagggagagtagatcatatggag 36101940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 43282444 - 43282518
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||  ||||||||||| ||||||| | || ||||| ||||| ||||||||||||| ||||||||||||    
T  43282444 aggcttaggtgaattgggcatgtagagagaagacttgcagattctgtaggaaggagagtagat-agatggaggata 43282518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 43791682 - 43791615
Alignment:
Q  6 taggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||||||||||||  ||||||| |||||||||| |||||| | ||||||||||| | ||||||    
T  43791682 taggtggtttgggcatgtggagagaagacctgtagattctgtagttaagagagtagatccgttggagg 43791615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 45558401 - 45558468
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatgga 71  Q
    ||||||||||||| ||| ||| ||||||  ||||| |||| |||||| ||||||||||||||||||||    
T  45558401 cttaggtggtttgtgcacgtagagagaatacctgtggattctgtagttaggagagtagatcagatgga 45558468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 40169685 - 40169759
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggat 75  Q
    |||||||||||||||||||||||| ||| ||| |  ||||||| |||   ||||||||||||||| |||||||||    
T  40169685 aggcttaggtggtttgggcatgtagagataagacacgtagattttgtgtgaaggagagtagatcaaatggaggat 40169759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 7273075 - 7273148
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||||||||||| ||||||| |||||||||   |  ||| | ||||||||||||||||||||    
T  7273075 aggcttagatggtttgggcatgtacagagaagacctgtagatgccgccgtatgaagagtagatcagatggagga 7273148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12841521 - 12841448
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||||||||||| ||||||| || ||||||   || ||||| ||||||||||| ||||||||    
T  12841521 aggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggagga 12841448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 33350052 - 33349979
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||||||||||| ||||||| || ||||||   || ||||| ||||||||||| ||||||||    
T  33350052 aggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggagga 33349979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 37617981 - 37618054
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||||||||||| ||||||| || ||||||   || ||||| ||||||||||| ||||||||    
T  37617981 aggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggagga 37618054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43491344 - 43491417
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||||||||||| ||||||| || ||||||   || ||||| ||||| ||||||||||||||    
T  43491344 aggcttagatggtttgggcatgtagagagaagacccgtagatgccgtcgtaagaagagttgatcagatggagga 43491417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 5418127 - 5418191
Alignment:
Q  12 gtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||| ||||||| | ||||| ||||| |||| ||||||||| |||||||||||| |||||||||    
T  5418127 gtttgtgcatgtagaaagaagacctgttgattctgtagtaagtagagtagatcaggtggaggata 5418191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 3457404 - 3457471
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggag 72  Q
    |||||||||||||||||  | ||||||| | |||||||  |||||||| |||||| ||||||||||||    
T  3457404 ttaggtggtttgggcattcagagagaagacatgtagatgttgtagtaatgagagtggatcagatggag 3457471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 30914713 - 30914654
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtag 61  Q
    ||||| |||||||||||||||||| |||||| | |||||| | |||| ||||||||||||    
T  30914713 ggctttggtggtttgggcatgtaacgagaagacttgtagaatttgtattaaggagagtag 30914654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 41948552 - 41948619
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagat 68  Q
    ||||||| |||||||||||||||| ||||||| ||| | |||||| |||| | |||||| ||||||||    
T  41948552 aggcttaagtggtttgggcatgtagagagaagacctctggattatttagtgaagagagtggatcagat 41948619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 9797949 - 9797895
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggag 56  Q
    |||||||||||||||| |||||| ||||||| | |||||||| || |||||||||    
T  9797949 ggcttaggtggtttggacatgtagagagaagacttgtagattttgaagtaaggag 9797895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2885968 - 2885895
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||||||||||| |||||||  | ||||||   || ||| | ||||||||||||||||||||    
T  2885968 aggcttagatggtttgggcatgtagagagaagatccgtagatgccgttgtacgaagagtagatcagatggagga 2885895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 27893763 - 27893722
Alignment:
Q  35 ctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||| |||| | |||||||||||||||||||||||||    
T  27893763 ctgtagattttgtacttaggagagtagatcagatggaggata 27893722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 29650420 - 29650493
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| |||||||| |||||| ||||||| || ||||||   || ||||| ||||||||||| ||||||||    
T  29650420 aggcttagatggtttggacatgtagagagaagacccgtagatgccgttgtaagaagagtagatcaaatggagga 29650493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 31005263 - 31005332
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||| ||||||||||||||| ||||||| || ||||||   || ||||| ||||||||||| ||||||||    
T  31005263 ttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggagga 31005332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 35906447 - 35906374
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||||||||||| ||||||| || ||||||   || ||||| |||||| |||| ||||||||    
T  35906447 aggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaagagtatatcatatggagga 35906374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 43281710 - 43281783
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| |||||||| |||||| ||||||| || ||||||   || ||||| ||||||||||| ||||||||    
T  43281710 aggcttagatggtttggacatgtagagagaagacccgtagatgccgttgtaagaagagtagatcaaatggagga 43281783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 44855418 - 44855345
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||||||||||| ||||||| || ||||||   ||  |||| ||||||||||| ||||||||    
T  44855418 aggcttagatggtttgggcatgtagagagaagacccgtagatgccgtcataagaagagtagatcaaatggagga 44855345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 45836726 - 45836653
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| |||||||| |||||| ||||||| || ||||||   || ||||| ||||||||||| ||||||||    
T  45836726 aggcttagatggtttggacatgtagagagaagacccgtagatgccgttgtaagaagagtagatcaaatggagga 45836653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 46356098 - 46356029
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||| ||||||||||||||| ||||||| |  ||||||  ||| ||||| ||||||||||| ||||||||    
T  46356098 ttagatggtttgggcatgtagagagaagacacgtagatgttgtggtaagaagagtagatcaaatggagga 46356029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 28858084 - 28858152
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtaga-tcagatggag 72  Q
    |||||||||||||||||||| | ||| | ||||| |||| | ||||||| |||||||| ||||||||||    
T  28858084 ttaggtggtttgggcatgtagaaagatgacctgtggattctatagtaagaagagtagattcagatggag 28858152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 73
Target Start/End: Original strand, 38739419 - 38739470
Alignment:
Q  21 tgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||| ||||||| | |||||||||||||||| | |||||||||||||||||||    
T  38739419 tgtagagagaagtcttgtagattatgtagtatg-agagtagatcagatggagg 38739470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 16917220 - 16917294
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||    
T  16917220 aggcttaggtggtttgggcatgtaaagagaaggcttgtagatt-tgtagtaaggagagtagatcagattgaggata 16917294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 29520695 - 29520761
Alignment:
Q  10 tggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||||||| ||||||| | |||||||| ||||||||||||||||||||||||||||||||    
T  29520695 tggtttgggcatgtagagagaagacttgtagattttgtagtaaggagagtagatcagatggaggata 29520761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 30559729 - 30559804
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||||||||||||| || ||||||| | |||||||| ||||||||||| ||| ||||||||||||||||    
T  30559729 aggcttaggtggtttgggcatttagagagaagacatgtagattttgtagtaaggacagtggatcagatggaggata 30559804  T

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Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 79079 - 79139
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtag 61  Q
    |||||||||||||||||||||||| ||||||| |||||||||| |||||||||||| ||||    
T  79079 aggcttaggtggtttgggcatgtatagagaagacctgtagattttgtagtaaggagggtag 79139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 9695668 - 9695734
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagat 68  Q
    ||||||||||||||||||||||| ||||||| |||||||||| || ||||| |||||||||| ||||    
T  9695668 ggcttaggtggtttgggcatgtagagagaagtcctgtagattctgaagtaaagagagtagatgagat 9695734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 43904909 - 43904836
Alignment:
Q  3 gcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||||||| |||||| ||||||| ||| |||||  ||||||||| ||| ||||||||||||||||||    
T  43904909 gcttaggtggtttggacatgtagagagaagacctatagatgttgtagtaagaagaatagatcagatggaggata 43904836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 30748493 - 30748557
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatca 65  Q
    |||||||||||||||||||||||| ||||||| |||||||||| | ||||||| | |||||||||    
T  30748493 aggcttaggtggtttgggcatgtagagagaagacctgtagattctatagtaagcaaagtagatca 30748557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 36143404 - 36143476
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||||||||| || ||| ||| ||| |||||| ||||||| ||||||||||||| ||||||||||    
T  36143404 cttaggtggtttgggcatttagagaaaagacctatagattctgtagtatggagagtagatcaaatggaggata 36143476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 38178479 - 38178431
Alignment:
Q  28 agaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  38178479 agaagacctgtagattttgtagtaaggagagtagatcagatggaggata 38178431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 42584407 - 42584475
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatg 69  Q
    |||||||||||||||||||||||| ||||||  |||||||||  ||||||| | |||||||||||||||    
T  42584407 aggcttaggtggtttgggcatgtagagagaaaacctgtagatgttgtagtacgaagagtagatcagatg 42584475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 29645082 - 29645141
Alignment:
Q  10 tggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatg 69  Q
    |||||||| |||||||||||||| ||| |||||| ||||||||||| |||||||||||||    
T  29645082 tggtttggacatgtaaagagaagacctatagattttgtagtaaggacagtagatcagatg 29645141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 29700313 - 29700387
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||||||||||| || ||| ||| ||  | |||| ||||||||||||||||||| ||||||||||||    
T  29700313 ggcttaggtggtttgggcatatagagaaaagaccattggattctgtagtaaggagagtagattagatggaggata 29700387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 5908707 - 5908756
Alignment:
Q  26 agagaaggcctgtagattatgtagtaaggagagtagatcagatggaggat 75  Q
    ||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  5908707 agagaagacctgtagattttgtagtaaggagagtagatcaggtggaggat 5908756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 32043633 - 32043698
Alignment:
Q  8 ggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||||||||| |||||| ||||||| ||||| |||  ||||||||||||| |||||||||||||||    
T  32043633 ggtggtttggccatgtagagagaagacctgtggatgttgtagtaaggagaatagatcagatggagg 32043698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 39953506 - 39953442
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatg 69  Q
    ||||||||||| |||||||| ||||  | ||| | ||||||||||||||||||||||||||||||    
T  39953506 ttaggtggtttaggcatgtagagaggtgacctatggattatgtagtaaggagagtagatcagatg 39953442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 10080144 - 10080089
Alignment:
Q  10 tggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatca 65  Q
    ||||||||||||||| ||||||| ||||  |||| |||||||||||||||||||||    
T  10080144 tggtttgggcatgtagagagaagacctgaggattttgtagtaaggagagtagatca 10080089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 35914839 - 35914772
Alignment:
Q  9 gtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||| ||| ||||||| ||| |||||| | ||| ||||||||||| ||||||||||||||    
T  35914839 gtggtttgggcacgtagagagaagacctatagattttatagcaaggagagtaggtcagatggaggata 35914772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 36545185 - 36545260
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||| ||||||||||||||| ||||||| || ||||||   || ||||| ||||||||||| ||||||||||    
T  36545185 aggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggaggata 36545260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 41972020 - 41971949
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||||| |||||| ||||||| | |||||||| | ||| |||||||||||||||| |||| ||||    
T  41972020 ttaggtggtttggacatgtagagagaagacgtgtagattttctagcaaggagagtagatcaggtggacgata 41971949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 7046371 - 7046444
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||| ||||||||||||||| ||||||  |  |||| || |||||||||||||||||||||| |||||||||    
T  7046371 ggcttagctggtttgggcatgtagagagaaaacacgtagcttctgtagtaaggagagtagatcag-tggaggata 7046444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 30198503 - 30198437
Alignment:
Q  10 tggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||| |  |||||| |||||| |||| |||||||| |||||||||||||||| ||||||    
T  30198503 tggtttgggcatcttgagagaaagcctgttgattttgtagtaacgagagtagatcagatgaaggata 30198437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 7531851 - 7531818
Alignment:
Q  40 gattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||||||||||||||||||||||||||||    
T  7531851 gattatgtagtaaggagagtagatcagatggagg 7531818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 16351421 - 16351486
Alignment:
Q  8 ggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||||||| |||||||| ||||||  | | | ||| ||||||||||||||||||||||||||||||    
T  16351421 ggtggtttaggcatgtagagagaaaacttttggatcatgtagtaaggagagtagatcagatggagg 16351486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 25985837 - 25985776
Alignment:
Q  10 tggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatgga 71  Q
    ||||||| |||| || ||||||| |||||  ||| |||||||||||||||||||||||||||    
T  25985837 tggtttgtgcatttagagagaagacctgtgaattttgtagtaaggagagtagatcagatgga 25985776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 32930999 - 32931072
Alignment:
Q  3 gcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||| ||||| |||||| | ||||   || |||||| ||||||||||||| ||||||||||||||||||    
T  32930999 gcttaggtgatttggacatgtagaaagaaaatctatagattctgtagtaaggagactagatcagatggaggata 32931072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 36395191 - 36395122
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||| ||||||||||||||| ||||||| |||||||||   || ||||| ||||||||||| ||||||||    
T  36395191 ttagatggtttgggcatgtagagagaagacctgtagatgccgtggtaagaagagtagatcaaatggagga 36395122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 45331775 - 45331742
Alignment:
Q  40 gattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||||||||||||||||||||||||||||    
T  45331775 gattatgtagtaaggagagtagatcagatggagg 45331742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 10824410 - 10824335
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||||||||| || || ||| ||| |   |||||| ||||||| ||||||||||||| ||||||||||    
T  10824410 aggcttaggtggtttgggtatttagagaaaagactcatagattttgtagtatggagagtagatcaaatggaggata 10824335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 38328035 - 38327996
Alignment:
Q  26 agagaaggcctgtagattatgtagtaaggagagtagatca 65  Q
    ||||||| |||||||||||| |||||||||||||||||||    
T  38328035 agagaagacctgtagattatatagtaaggagagtagatca 38327996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 39051182 - 39051249
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggag 72  Q
    |||||||||||||| ||||| ||| ||| | |||||||| || ||| ||||||||| |||||||||||    
T  39051182 ttaggtggtttgggtatgtagagaaaagtcatgtagattttgcagtgaggagagtaaatcagatggag 39051249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 45512739 - 45512672
Alignment:
Q  3 gcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatgg 70  Q
    |||||| |||||||||||| ||||||||||  || ||||||  |||||||| ||||||||| ||||||    
T  45512739 gcttagatggtttgggcatataaagagaagatctctagattcggtagtaagcagagtagattagatgg 45512672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 17491864 - 17491810
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagag 58  Q
    ||||||||||||||| ||||| ||||||| ||| || ||| ||||||||||||||    
T  17491864 cttaggtggtttgggtatgtagagagaagacctatacattttgtagtaaggagag 17491810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 35362867 - 35362821
Alignment:
Q  30 aaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||| |||||| ||||| ||||||||||||||| ||||||||||    
T  35362867 aaggcctatagattttgtagcaaggagagtagatcaaatggaggata 35362821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 74
Target Start/End: Complemental strand, 38409229 - 38409195
Alignment:
Q  40 gattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||||| ||||||||||||||||||||||||    
T  38409229 gattatgtagcaaggagagtagatcagatggagga 38409195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 11523965 - 11523896
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||| ||||||||||||||| ||||||| || ||||||   || ||||| ||||||||||| ||||||||    
T  11523965 ttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggagga 11523896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12491384 - 12491311
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||||||||||| ||||||| || ||||||   || ||||| ||||||||||| ||| ||||    
T  12491384 aggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatgaagga 12491311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 39946893 - 39946966
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| |||||||| |||||| | ||||| |||||||||   || ||||| ||||||||||| ||||||||    
T  39946893 aggcttagatggtttggacatgtagaaagaagacctgtagatgccgtcgtaagaagagtagatcaaatggagga 39946966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 40813364 - 40813433
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||| ||||||||||||||| |||||||  ||||||||   || ||||| ||||||||||| ||||||||    
T  40813364 ttagatggtttgggcatgtagagagaagatctgtagatgccgtggtaagaagagtagatcaaatggagga 40813433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 42854250 - 42854177
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| |||||||| |||||| ||||||| || ||||||   || ||||| ||||||||||| ||||||||    
T  42854250 aggcttagatggtttggacatgtagagagaagacccgtagatgccgttgtaagaagagtagatcaaatggagga 42854177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 2776474 - 2776422
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaagg 54  Q
    ||||||||||||||||||||||  ||||||| || ||||||| | ||||||||    
T  2776474 ggcttaggtggtttgggcatgttgagagaagacccgtagattctctagtaagg 2776422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 3079848 - 3079781
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatg 69  Q
    ||||||||||||||| |||||||| ||||||| ||| | |||| |||  |||||| |||||||||||||    
T  3079848 aggcttaggtggtttcggcatgtagagagaagacctat-gattttgtgataaggaaagtagatcagatg 3079781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 16715310 - 16715378
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatgg 70  Q
    ||||||||||||||||| |  || ||||||| | ||||| || | ||||||| ||||||||||||||||    
T  16715310 ggcttaggtggtttgggtacctagagagaagacatgtaggttctttagtaagtagagtagatcagatgg 16715378  T

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Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 24558558 - 24558598
Alignment:
Q  36 tgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||| ||||||||| | ||||||||||||||||||||    
T  24558558 tgtagattttgtagtaagaatagtagatcagatggaggata 24558598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 38668100 - 38668140
Alignment:
Q  36 tgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||||||||| ||||||||||| || |||||||    
T  38668100 tgtagattatgtagtaagaagagtagatcaaatagaggata 38668140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 39760670 - 39760602
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||||||||||| || ||| |||   ||||||||  ||| |||||||||||||||| |||||||    
T  39760670 ttaggtggtttgggcatatagagaaaagagttgtagattccgtaataaggagagtagatcatatggagg 39760602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 11675547 - 11675621
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  11675547 ggcttaggtggtttgggcatgttgagagaaggcctgtagattctgtagtaaggagagtagatcatagggaggata 11675621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 42199325 - 42199393
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggag 72  Q
    ||||||||||||||||||||| ||||||| | |||||||| ||||||||||||||||||||| ||||||    
T  42199325 cttaggtggtttgggcatgtagagagaagacatgtagattctgtagtaaggagagtagatcacatggag 42199393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 43475276 - 43475351
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||||||||| ||  | ||||||| |||||||||  ||||||||||||||||||||||||||||||||    
T  43475276 aggcttaggtggtttgggtattcagagagaagacctgtagatgttgtagtaaggagagtagatcagatggaggata 43475351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 2712983 - 2713053
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    ||||||||||||||||||||| ||||||| ||||| |||| ||||  ||||||||||||||||||||||||    
T  2712983 cttaggtggtttgggcatgtagagagaagacctgtggattctgtatgaaggagagtagatcagatggagga 2713053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 41109983 - 41109911
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||||  |||||| ||||||||||| |||||| ||||||||||| |||||||| |||||||||||    
T  41109983 cttaggtggtttgaacatgtagagagaaggcctatagattttgtagtaaggatagtagatcggatggaggata 41109911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 7359501 - 7359431
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||||| |||||| |||||||   |||||||| ||||||||||||||||||||||||||||||||    
T  7359501 ttaggtggtttgg-catgtagagagaagatatgtagattctgtagtaaggagagtagatcagatggaggata 7359431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 21093788 - 21093863
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||| ||||||||||||| || |||| | || ||||| |||||||| |||||||||||||||||||||||    
T  21093788 aggcttaggtagtttgggcatgtagagggaagacttggagattttgtagtaaagagagtagatcagatggaggata 21093863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 79553 - 79623
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggat 75  Q
    ||||||||||||| |||||| ||||||| ||| |||||| ||||||||||||||| ||||| |||||||||    
T  79553 ttaggtggtttggacatgtagagagaagacctatagattctgtagtaaggagagtcgatcaaatggaggat 79623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 14667819 - 14667877
Alignment:
Q  13 tttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatgga 71  Q
    |||||||||||| ||||||| | |||| |||||||||||||||||||||||||||||||    
T  14667819 tttgggcatgtagagagaagacatgtacattatgtagtaaggagagtagatcagatgga 14667877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 15489736 - 15489663
Alignment:
Q  3 gcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||| ||||||||||||||| |||||||   |||||||| |||| |||||||||||||| ||||||||||||    
T  15489736 gcttagatggtttgggcatgtagagagaagatttgtagattttgtattaaggagagtagattagatggaggata 15489663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 18351154 - 18351089
Alignment:
Q  1 aggcttaggtggtttgggcat-gtaaagagaaggcctgtagattatgtagtaaggagagtagatca 65  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||||||| | ||||||||||||||||    
T  18351154 aggcttaggtggtttgggcattgtagagagaagacctgtagattatgcaataaggagagtagatca 18351089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 9917695 - 9917621
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||| ||||||| || |||||||||||| | ||| |||| |||||||| |||||| ||||||||||||||||    
T  9917695 ggcttagttggtttgtgcgtgtaaagagaagacatgttgattttgtagtaaagagagtcgatcagatggaggata 9917621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 21952399 - 21952465
Alignment:
Q  7 aggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||||| |||||| ||||||| ||||| |||| | ||||||||||| |||||||||||||||    
T  21952399 aggtggtttggacatgtagagagaagtcctgtggattctatagtaaggagaatagatcagatggagg 21952465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 31636163 - 31636097
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatgg 70  Q
    ||||||||||||||||||||| ||||||| || || |||  ||||||||||||||||||| ||||||    
T  31636163 cttaggtggtttgggcatgtagagagaagacccgtggatgttgtagtaaggagagtagattagatgg 31636097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 38578764 - 38578694
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    ||||||||||||| ||||||||||||||| | |||||||||| |||| || ||| |||||||||| |||||    
T  38578764 cttaggtggtttgagcatgtaaagagaagacatgtagattatatagttagcagattagatcagatcgagga 38578694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 14749346 - 14749415
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||| |||||||| |||||| ||||||| ||||| |||| ||| ||||||||||| |||||||||||||    
T  14749346 cttagatggtttggacatgtagagagaagacctgtggattctgttgtaaggagagtcgatcagatggagg 14749415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 27249256 - 27249326
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||||||||||||||| || ||||  |||||| |||||||||| |||||||||  ||||||||||||||||||    
T  27249256 aggcttaggtggtttgagcttgtagggagaagacctgtagattttgtagtaag--gagtagatcagatggagg 27249326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 9235103 - 9235167
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagat 68  Q
    |||||||| |||| ||||||| ||||||| | |||||||| |||||||| |||||||||||||||    
T  9235103 cttaggtgttttgagcatgtagagagaagacttgtagattctgtagtaacgagagtagatcagat 9235167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 15986979 - 15986908
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||||||| |||| |||||||   |||||||| | ||||||||||||| ||||| ||||||||||    
T  15986979 ttaggtggtttgggcgtgtagagagaagatatgtagattctatagtaaggagagtggatcaaatggaggata 15986908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 23979986 - 23980049
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagat 68  Q
    ||||||||||||| |||||| ||||||  |||||||||| | ||||||| ||||||||||||||    
T  23979986 ttaggtggtttggacatgtagagagaaaccctgtagattctatagtaagaagagtagatcagat 23980049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 4460246 - 4460316
Alignment:
Q  3 gcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||| |||||||||||||||  |||||||  |||| |||| ||||||||||| ||| |||||||||||||    
T  4460246 gcttaagtggtttgggcatgtggagagaagaactgtggattctgtagtaaggaaagttgatcagatggagg 4460316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 41833826 - 41833760
Alignment:
Q  3 gcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatg 69  Q
    |||||||||||||||||||||| ||| ||| ||||||| || |||  |||||||| |||||||||||    
T  41833826 gcttaggtggtttgggcatgtagagacaagacctgtaggttctgttttaaggagaatagatcagatg 41833760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2075720 - 2075647
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||||||||||| ||||||| || ||||||   || ||||| ||||||||||| ||||||||    
T  2075720 aggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggagga 2075647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 4496420 - 4496493
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||||||||||| ||||||| || ||||||   || ||||| ||||||||||| ||||||||    
T  4496420 aggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggagga 4496493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 7678520 - 7678581
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagat 63  Q
    ||||||||| |||||||| |||| ||| ||| | |||||||| |||||||||||||||||||    
T  7678520 ggcttaggttgtttgggcttgtagagaaaagacatgtagattctgtagtaaggagagtagat 7678581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 4026578 - 4026527
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaagga 55  Q
    |||||||||||||| |||||| |||| || |||||||||| |||||||||||    
T  4026578 cttaggtggtttggacatgtagagaggagacctgtagattctgtagtaagga 4026527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 6889029 - 6889104
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||| ||||||||| |||||| ||||||| | ||| |||||||| ||||||| | || || ||||||||||||    
T  6889029 aggcttaagtggtttggacatgtagagagaagacttgtggattatgtggtaaggacaataaattagatggaggata 6889104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 28676634 - 28676705
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggat 75  Q
    |||||||||||| |||||||| ||||||| ||| || ||||||| ||||||| | || || |||||||||||    
T  28676634 cttaggtggtttcggcatgtagagagaagacctttaaattatgtcgtaaggataatatattagatggaggat 28676705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 32516592 - 32516667
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||||||| | | |||||||| ||  | |||||||| ||||||| |||||||||||| |||| ||||||    
T  32516592 aggcttaggtggtttagacttgtaaagaaaatacatgtagattctgtagtatggagagtagatcggatgaaggata 32516667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 1525683 - 1525753
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    ||||||||| |||| |||||| ||||||| || ||  ||| || ||| |||||||||||||||||||||||    
T  1525683 cttaggtggcttggacatgtagagagaagacccgtgaattctgcagttaggagagtagatcagatggagga 1525753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 33667255 - 33667297
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatg 46  Q
    ||||||||||||||||||||| ||||||| ||||| |||||||    
T  33667255 cttaggtggtttgggcatgtagagagaagacctgtggattatg 33667297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 1287825 - 1287752
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||||||||||| ||||||| |  ||||||   || ||||| ||||||||||| ||||||||    
T  1287825 aggcttagatggtttgggcatgtagagagaagacacgtagatgccgtggtaagaagagtagatcaaatggagga 1287752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12492630 - 12492557
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||||||||||| ||||||| || ||||||   ||  |||| ||||||||||| ||||||||    
T  12492630 aggcttagatggtttgggcatgtagagagaagacccgtagatgccgtgttaagaagagtagatcaaatggagga 12492557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 17340682 - 17340609
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    ||||||||||||||| | ||||| |||||||  |  | |||| |||||||| | ||||||||||||||||||||    
T  17340682 aggcttaggtggttttgacatgttaagagaaaactcgcagatgatgtagtatgaagagtagatcagatggagga 17340609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 24178546 - 24178619
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||||||||||  ||||||| || ||||||   || ||||| ||||||||||| ||||||||    
T  24178546 aggcttagatggtttgggcatgtggagagaagacccgtagatgccgtggtaagaagagtagatcaaatggagga 24178619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 26884934 - 26884861
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    ||||||||| ||||||| |||||| ||| |||   |||||||  ||| ||||| ||||||||||||||||||||    
T  26884934 aggcttaggcggtttggacatgtagagataagatttgtagatgttgtcgtaagaagagtagatcagatggagga 26884861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 38501660 - 38501591
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||| |||||||| |||||||||||||| | |||||||   || ||||| ||||||||| ||||||||||    
T  38501660 ttagatggtttggacatgtaaagagaagacttgtagatgccgtcgtaagaagagtagattagatggagga 38501591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 38685003 - 38685076
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| |||||||| |||||| ||||||| || ||||||   || ||||| ||||||||||| ||||||||    
T  38685003 aggcttagatggtttggacatgtagagagaagacccgtagatgccgtcgtaagaagagtagatcaaatggagga 38685076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 43558071 - 43558006
Alignment:
Q  3 gcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagat 68  Q
    ||||||||||||||||||| || ||||||| | |||||||  || |||||| ||||||||| ||||    
T  43558071 gcttaggtggtttgggcatatagagagaagacttgtagatgctgcagtaagaagagtagattagat 43558006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 3e-21; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 43752193 - 43752117
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggatac 77  Q
    ||||||||||| ||||| |||||| ||||||| ||| |||||||||||||| |||||||||||||||||||||||||    
T  43752193 aggcttaggtgatttggacatgtagagagaagacctatagattatgtagtagggagagtagatcagatggaggatac 43752117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 3481177 - 3481252
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||||||||| |||||| ||||||| ||| |||||| ||||| ||||||||||||||||||||||||||    
T  3481177 aggcttaggtggtttggacatgtagagagaagacctatagattctgtagcaaggagagtagatcagatggaggata 3481252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 43260440 - 43260512
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||||||||||||||||| |||| ||| | |||||||| | |||||||||||||||||||||||||||    
T  43260440 aggcttaggtggtttgggcatgtgaagaaaagacttgtagattctatagtaaggagagtagatcagatggagg 43260512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 12141580 - 12141655
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||||||||||| ||| | ||||| |||||||||| | |||||||||||||||||||||| |||||||    
T  12141580 aggcttaggtggtttgggcacgtagaaagaagacctgtagattctctagtaaggagagtagatcagattgaggata 12141655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 76
Target Start/End: Original strand, 26850272 - 26850346
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||||| || |||||| ||||||| ||| || ||||||||||||||||| ||||||||||||||||||    
T  26850272 ggcttaggtggttcggccatgtagagagaagacctatatattatgtagtaaggagactagatcagatggaggata 26850346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 12026251 - 12026182
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatgg 70  Q
    ||||||||||||||||  |||||| ||||||| |||||||||| |||| |||||||||||||||||||||    
T  12026251 aggcttaggtggtttgaccatgtagagagaagacctgtagattttgtactaaggagagtagatcagatgg 12026182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 42543274 - 42543343
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||||||||||||||| ||||||| ||||| |||| |||||| |||||||||||||| |||||||    
T  42543274 cttaggtggtttgggcatgtacagagaagacctgtggattctgtagttaggagagtagatcaaatggagg 42543343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 45077797 - 45077866
Alignment:
Q  7 aggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||| |||||||| ||||||  | |||||||| ||||||||||||||||||||||||||||||||    
T  45077797 aggtggttttggcatgtagagagaaaacttgtagattttgtagtaaggagagtagatcagatggaggata 45077866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 13240991 - 13240927
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatca 65  Q
    |||||||||||||||||||||||| ||||||| | |||||||| | |||||||||||||||||||    
T  13240991 aggcttaggtggtttgggcatgtagagagaagacatgtagattctttagtaaggagagtagatca 13240927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 38434995 - 38435063
Alignment:
Q  8 ggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||||||||||||||||| | |||||||  | ||||||||||||||||||| ||||||||||    
T  38434995 ggtggtttgggcatgtaaagagaagacttgtagatgctttagtaaggagagtagatcatatggaggata 38435063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 42092557 - 42092625
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||| | |||||||||| ||||||||| |||||||| ||||||||||||||||||| |||||||||    
T  42092557 ttaggtgatctgggcatgtagagagaaggcttgtagattttgtagtaaggagagtagattagatggagg 42092625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 42149892 - 42149817
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||||||| | ||||| ||||||  ||| |||||| ||||||||||||||||||||||||| ||||||    
T  42149892 aggcttaggtggtttgagtatgtagagagaaatcctatagattctgtagtaaggagagtagatcagatgcaggata 42149817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 43832134 - 43832205
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggag 72  Q
    ||||||||||| |||||||||||| ||||||  | ||| ||||||||||| |||||||||||||||||||||    
T  43832134 aggcttaggtgatttgggcatgtacagagaaaacatgtggattatgtagttaggagagtagatcagatggag 43832205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 37481863 - 37481791
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||||||||||||||| ||||||| ||||||| | |||  ||| |||||| ||||||||||||||||||||||    
T  37481863 aggcttaggtggtttgagcatgtagagagaagacttgtgaattttgtagttaggagagtagatcagatggagg 37481791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 6219003 - 6219078
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||||||||| |||||| |||| ||   |||||||||||||||||||||||  ||||| ||||||||||    
T  6219003 aggcttaggtggtttggacatgtagagaggagatatgtagattatgtagtaaggagaggtgatcaaatggaggata 6219078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 9556615 - 9556540
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||||||| |||||||| ||||||| |  ||||||| ||||||||| | |||| |||||||||||||||    
T  9556615 aggcttaggtggtttaggcatgtagagagaagacaagtagattctgtagtaagaaaagtatatcagatggaggata 9556540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 76
Target Start/End: Original strand, 18958960 - 18959022
Alignment:
Q  14 ttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||| | ||||||| |||| || || ||||||||||||||||||||||||||||||||    
T  18958960 ttgggcatgcagagagaagacctgcagcttttgtagtaaggagagtagatcagatggaggata 18959022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 7825398 - 7825471
Alignment:
Q  3 gcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||| ||||||| ||||||| ||||||| | |||||||| | |||| |||||||||||| ||||||||||||    
T  7825398 gcttagttggtttgagcatgtagagagaagacatgtagattctatagtcaggagagtagatgagatggaggata 7825471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 24583878 - 24583805
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||||||||||| ||||||| || ||||||  ||| ||||| ||||||||||| ||||||||    
T  24583878 aggcttagatggtttgggcatgtagagagaagacccgtagatgctgtcgtaagaagagtagatcaaatggagga 24583805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 6 - 65
Target Start/End: Complemental strand, 3306021 - 3305962
Alignment:
Q  6 taggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatca 65  Q
    |||||||||||||||| || ||||||| | |||| |||||||||||| ||||||||||||    
T  3306021 taggtggtttgggcatttagagagaagacttgtaaattatgtagtaaagagagtagatca 3305962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 19235212 - 19235158
Alignment:
Q  19 catgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||||||||||||| ||||  |||| |||||||| ||||||||||||||||||||    
T  19235212 catgtaaagagaagacctgcggattctgtagtaaagagagtagatcagatggagg 19235158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 23714496 - 23714438
Alignment:
Q  12 gtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatgg 70  Q
    |||| |||||||| ||||||| | ||| |||||||||||||||||||||||||| ||||    
T  23714496 gtttaggcatgtagagagaagacttgtggattatgtagtaaggagagtagatcaaatgg 23714438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 24102168 - 24102110
Alignment:
Q  12 gtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatgg 70  Q
    |||| |||||||| ||||||| | ||| |||||||||||||||||||||||||| ||||    
T  24102168 gtttaggcatgtagagagaagacttgtggattatgtagtaaggagagtagatcaaatgg 24102110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 11412757 - 11412827
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||||||||| |||||||||| || ||| |||  ||||||||| |||||||  ||||||||||||||||||||    
T  11412757 aggcttaggttgtttgggcatttagagataagaactgtagattctgtagta--gagagtagatcagatggagg 11412827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 12734735 - 12734808
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| |||||||| |||||||||||||| || ||||||   || ||||| ||||||||||| ||||||||    
T  12734735 aggcttagatggtttggacatgtaaagagaagacccgtagatgccgtggtaagaagagtagatcaaatggagga 12734808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 9647851 - 9647783
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||||||| |||||||| ||||| |||||||||| | |||||   ||||||| |||||||||||    
T  9647851 ttaggtggtttggacatgtaaaaagaagacctgtagattctctagtattaagagtaggtcagatggagg 9647783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 19337087 - 19337039
Alignment:
Q  14 ttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtaga 62  Q
    ||||||||||| ||||||||| |||||||| ||||||| ||||||||||    
T  19337087 ttgggcatgtagagagaaggcatgtagattttgtagtatggagagtaga 19337039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 8180818 - 8180889
Alignment:
Q  3 gcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||| ||||||||||||||| ||||||| ||||| |||   || ||||| ||||||||||| ||||||||    
T  8180818 gcttagatggtttgggcatgtagagagaagacctgtggatgccgtggtaagaagagtagatcaaatggagga 8180889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 9578946 - 9578887
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagat 63  Q
    |||||||||||||| |||||| ||||||| |||||| ||| |||| |||| |||||||||    
T  9578946 cttaggtggtttggacatgtagagagaagacctgtaaattttgtattaagtagagtagat 9578887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 36819221 - 36819276
Alignment:
Q  10 tggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatca 65  Q
    |||||||| ||| || |||||||||||||||||| |||||| || |||||||||||    
T  36819221 tggtttggacatatagagagaaggcctgtagattttgtagtcagaagagtagatca 36819276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 18188819 - 18188865
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagt 50  Q
    |||||||||||||||||||||||||||||  || |||||| ||||||    
T  18188819 cttaggtggtttgggcatgtaaagagaagatctatagattttgtagt 18188865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 451894 - 451821
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||||||||||| ||| ||| || ||||||   || ||||| ||||||||||| ||||||||    
T  451894 aggcttagatggtttgggcatgtagagaaaagacccgtagatgccgtggtaagaagagtagatcaaatggagga 451821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3866108 - 3866181
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||| ||||||| ||||||| || ||||||   || ||||| ||||||||||| ||||||||    
T  3866108 aggcttagatggtttgtgcatgtagagagaagacccgtagatgtcgtggtaagaagagtagatcaaatggagga 3866181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 14255660 - 14255697
Alignment:
Q  36 tgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  14255660 tgtagattatgtagtaaggagaatagaccagatggagg 14255697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 25834717 - 25834790
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| |||||||| |||||| ||||||| ||||| |||   || ||||| ||||||||||| ||||||||    
T  25834717 aggcttagatggtttggacatgtagagagaagacctgtggatgccgttgtaagaagagtagatcaaatggagga 25834790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 76
Target Start/End: Original strand, 33287495 - 33287528
Alignment:
Q  43 tatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||| |||||||||||||||||||||    
T  33287495 tatgtagtaaggggagtagatcagatggaggata 33287528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 37470354 - 37470309
Alignment:
Q  26 agagaaggcctgtagattatgtagtaaggagagtagatcagatgga 71  Q
    ||||||| | ||||||||||||| |||||||||||||| |||||||    
T  37470354 agagaagacttgtagattatgtattaaggagagtagattagatgga 37470309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 38429920 - 38429993
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| |||||||| |||||||||||||| || ||| ||   || ||||| ||||||||||| ||||||||    
T  38429920 aggcttagatggtttggacatgtaaagagaagacccgtatatgccgttgtaagaagagtagatcaaatggagga 38429993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 38860209 - 38860286
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgta-----gattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||||||||| ||||| || | ||||| ||||||     |||||||||| ||||||||||||| |||||||||    
T  38860209 aggcttaggtggtttaggcatttagaaagaagacctgtactatagattatgtaggaaggagagtagatgagatggagg 38860286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 41763288 - 41763215
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    ||||||||||||||||| |||| | ||||||| |||||||||   || ||||| | ||||||||| ||||||||    
T  41763288 aggcttaggtggtttggacatgcagagagaagacctgtagatgccgttgtaagaaaagtagatcaaatggagga 41763215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 7326397 - 7326333
Alignment:
Q  10 tggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    ||||||||||||||| ||||||| |||||||||   || ||||| ||||||||||| ||| ||||    
T  7326397 tggtttgggcatgtagagagaagacctgtagatgccgtggtaagaagagtagatcaaatgaagga 7326333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 26784586 - 26784514
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||||||||| ||||| |||| || |||||||   ||| |||| |||||||||||| |||||| |||||||||    
T  26784586 aggcttaggttgtttgtgcatttagagagaagatatgtggattttgtagtaaggagggtagataagatggagg 26784514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 33594509 - 33594445
Alignment:
Q  10 tggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    ||||||| ||||||| ||||||| | ||| ||||  |||||||||||| ||||||||||| ||||    
T  33594509 tggtttgagcatgtagagagaagacatgtggatttggtagtaaggagaatagatcagatgaagga 33594445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 40416407 - 40416482
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||||||| |||||||| |||||||  ||||||||| ||||||||||||||||||||||||| ||||||    
T  40416407 aggcttaggtggtttaggcatgtagagagaagaactgtagattttgtagtaaggagagtagatcagatgcaggata 40416482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 48431652 - 48431577
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||||||||||||||| ||||||| | |||||||| |||||||| |||||| ||||||||||||||||    
T  48431652 aggcttaggtggtttgggcatgtagagagaagacttgtagattttgtagtaaagagagttgatcagatggaggata 48431577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 5338762 - 5338835
Alignment:
Q  3 gcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||||||||||| | ||||||| |||||||||  | ||||||||||||||||||||||||||||||    
T  5338762 gcttaggtggtttgggcatgcagagagaagacctgtagatgctttagtaaggagagtagatcagatggaggata 5338835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 2544638 - 2544710
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||||| |||||| ||||||| ||| |||||| | ||||||||||||||||||||||||||||||    
T  2544638 cttaggtggtttggacatgtagagagaagacctatagattctatagtaaggagagtagatcagatggaggata 2544710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 10569312 - 10569241
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||||||||||||||||| ||||||| |||||||||| ||||||| |||| |||||| |||||||||    
T  10569312 ggcttaggtggtttgggcatgtagagagaagacctgtagattctgtagtacggagggtagattagatggagg 10569241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 14226075 - 14226004
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggag 72  Q
    |||||||||||||||||||||||| |||| |  |||||||||| ||||||||||||||||||||| ||||||    
T  14226075 aggcttaggtggtttgggcatgtagagaggattcctgtagattttgtagtaaggagagtagatcacatggag 14226004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 19908281 - 19908214
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggag 72  Q
    ||||||| |||||||||||| ||||||  ||||||||||||||||||||||||| | |||||||||||    
T  19908281 ttaggtgatttgggcatgtagagagaaaacctgtagattatgtagtaaggagagcaaatcagatggag 19908214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 32404772 - 32404697
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||||||||  ||||| ||||||| |||||||||| | ||||||||||||||||  ||||||||||||    
T  32404772 aggcttaggtggtttggatatgtagagagaagacctgtagattctatagtaaggagagtagagaagatggaggata 32404697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 35828792 - 35828721
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||||| | |||| ||||||| ||| ||||||||||||||||||||| |||||| ||||||||||    
T  35828792 ttaggtggtttggacgtgtagagagaagacctatagattatgtagtaaggagagaagatcatatggaggata 35828721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 43423755 - 43423825
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatgga 71  Q
    ||||||||||||||||| |||||| ||||||| | |||||||||||||||||| ||||||||  |||||||    
T  43423755 aggcttaggtggtttggccatgtagagagaagacttgtagattatgtagtaagtagagtagactagatgga 43423825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 40419678 - 40419747
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||| |||||||||||||||| ||||||| | ||| |||||||||| ||||||||||| |||||||||||    
T  40419678 cttaagtggtttgggcatgtagagagaagacatgtggattatgtagcaaggagagtagttcagatggagg 40419747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 17275233 - 17275292
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtag 61  Q
    ||||||||||||||| ||||||| ||||||  |||||||||| |||||||||||||||||    
T  17275233 ggcttaggtggtttgtgcatgtagagagaatccctgtagattttgtagtaaggagagtag 17275292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 27848049 - 27847978
Alignment:
Q  3 gcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||||||||||||||| | ||||||| |||||||||  ||||||| | |||||| |||||||||||||    
T  27848049 gcttaggtggtttgggcatgcagagagaagacctgtagatgctgtagtatgaagagtatatcagatggagga 27847978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 43375817 - 43375758
Alignment:
Q  17 ggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||| ||||||| ||| ||||||||||||||| ||||||||||||||||| |||||    
T  43375817 ggcatgtagagagaagacctatagattatgtagtaaagagagtagatcagatggtggata 43375758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 15577461 - 15577527
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatgga 71  Q
    |||||||||||| ||||||| ||||||| | ||  |||| |||||||||||||||||||||||||||    
T  15577461 ttaggtggtttgagcatgtatagagaagacatgcggattctgtagtaaggagagtagatcagatgga 15577527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 27704048 - 27704118
Alignment:
Q  3 gcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggat 75  Q
    ||||| ||||||||| |||||| ||| ||| |||  ||||||||||| |||||||||||||||||||||||||    
T  27704048 gcttatgtggtttggacatgtagagaaaagacct--agattatgtagcaaggagagtagatcagatggaggat 27704118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 13827810 - 13827746
Alignment:
Q  7 aggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatgga 71  Q
    ||||||||||| |||||| |||||||   |||||||| ||||||||||||||||||||| |||||    
T  13827810 aggtggtttggacatgtagagagaagaagtgtagattctgtagtaaggagagtagatcatatgga 13827746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 43954236 - 43954301
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||||||||| ||||||| |||||      ||||||||||||| |||||||||||||||||||||||    
T  43954236 ggcttaggtggtttgagcatgtagagaga------gtagattatgtagcaaggagagtagatcagatggagg 43954301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 73
Target Start/End: Complemental strand, 17640290 - 17640227
Alignment:
Q  10 tggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||||| |||||||| |||| || || || |||| |||||||||||||||||||||||||||||    
T  17640290 tggtttaggcatgtagagaggagacccgtggattttgtagtaaggagagtagatcagatggagg 17640227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 46388413 - 46388484
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||| |||||  |||||| ||||||| | |||||||| ||||||||||||||||| |||| ||||||    
T  46388413 ggcttaggtagtttgcacatgtagagagaagacttgtagattctgtagtaaggagagtagctcagttggagg 46388484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 990705 - 990635
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatgga 71  Q
    ||||| ||||||||| || ||||||||||||| | | |||||| ||||| ||||||||||||| |||||||    
T  990705 aggctcaggtggtttaggtatgtaaagagaagacatatagattctgtagcaaggagagtagattagatgga 990635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 4590763 - 4590701
Alignment:
Q  11 ggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||||||||||| | |||||||  ||||||||| |||||||| |||||||||| |||||||||    
T  4590763 ggtttgggcatgcagagagaagatctgtagattttgtagtaaagagagtagattagatggagg 4590701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 50771795 - 50771730
Alignment:
Q  7 aggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||||||| |||| ||||||| ||  | |||| |||||||||||||||||||||||||||||    
T  50771795 aggtggtttgggc-tgtagagagaagacccatggattttgtagtaaggagagtagatcagatggagg 50771730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 1210781 - 1210854
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||||||||||| ||||||| || ||||||   || ||||| ||||||||||| ||||||||    
T  1210781 aggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggagga 1210854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 3819099 - 3819030
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||| |||||||||||||||| | ||||| | ||| |||| | |||||| ||||||||||||||||||||    
T  3819099 cttaagtggtttgggcatgtagaaagaagacttgtggattctctagtaaagagagtagatcagatggagg 3819030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 12231408 - 12231465
Alignment:
Q  8 ggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatca 65  Q
    ||||||||||||||| ||||||||| ||| || ||| ||| |||||||||||||||||    
T  12231408 ggtggtttgggcatgcaaagagaagacctatacattttgtcgtaaggagagtagatca 12231465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 25979477 - 25979404
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| |||||||| |||||| ||||||| || ||||||  ||| ||||||||||||||||  ||||||||    
T  25979477 aggcttagatggtttggacatgtagagagaagacccgtagatgctgttgtaaggagagtagatcgaatggagga 25979404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 29807905 - 29807974
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||| ||| |||||||||||| ||||||| | ||| ||||||||||||| |||||||||| | |||||||    
T  29807905 cttacgtgatttgggcatgtagagagaagacatgtggattatgtagtaaagagagtagattaaatggagg 29807974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 34792595 - 34792522
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||||||||||| ||||||| || ||||||   || ||||| ||||||||||| ||||||||    
T  34792595 aggcttagatggtttgggcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggagga 34792522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 39140557 - 39140626
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatgga 71  Q
    ||||||||||||||||||||||| ||||||| ||  || ||  ||||||| | |||||||||||||||||    
T  39140557 ggcttaggtggtttgggcatgtagagagaagaccgatacatgttgtagtacgaagagtagatcagatgga 39140626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 43898304 - 43898337
Alignment:
Q  40 gattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||||||||||||||||||||||||||||    
T  43898304 gattatgtagtaaggagagtagatcagatggagg 43898337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 51602092 - 51602165
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||||||||||| ||||||| || ||||||   || ||||| ||||||||||| ||||||||    
T  51602092 aggcttagatggtttgggcatgtagagagaagacccgtagatgtcgtggtaagaagagtagatcaaatggagga 51602165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 52561835 - 52561762
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    ||||||||||||||| |||||||| ||||||| ||  |||||  || |||| | ||||||||||||||||||||    
T  52561835 aggcttaggtggtttcggcatgtagagagaagaccgatagatgttgcagtacgaagagtagatcagatggagga 52561762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 16822267 - 16822211
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagag 58  Q
    |||||||||||||||| |||||| ||||||| |||||| | | ||||||||||||||    
T  16822267 ggcttaggtggtttggacatgtagagagaagacctgtataatttgtagtaaggagag 16822211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 17815508 - 17815560
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaag 53  Q
    |||||||| ||||||||||||||| ||||| ||| | ||||||||||||||||    
T  17815508 aggcttagttggtttgggcatgtagagagatggcttatagattatgtagtaag 17815560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 72
Target Start/End: Complemental strand, 23791887 - 23791819
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggag 72  Q
    ||||||||||||| ||||||| ||||||| | ||| ||||||||||| || || |||||| ||||||||    
T  23791887 cttaggtggtttgtgcatgtagagagaagacatgtggattatgtagttagaagggtagatgagatggag 23791819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 77
Target Start/End: Complemental strand, 36340045 - 36339973
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggatac 77  Q
    ||||||||||| | |||| | ||||||| ||| |||||| |||||||||| | || |||||||||||||||||    
T  36340045 ttaggtggtttagacatggagagagaagacctatagattttgtagtaaggcgggttgatcagatggaggatac 36339973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 76
Target Start/End: Original strand, 8796249 - 8796320
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||||| |||||| ||| ||| | ||||| ||  ||||||||||||||| ||| |||||||||||    
T  8796249 ttaggtggtttggacatgtagagataagacatgtaggtttcgtagtaaggagagtaaatcggatggaggata 8796320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 33561079 - 33561032
Alignment:
Q  26 agagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||| |||||||||| |||||||||||||||||||  ||||||||    
T  33561079 agagaagacctgtagattctgtagtaaggagagtagatatgatggagg 33561032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 38868919 - 38868990
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||||||||||||||||| ||||||  |  ||||||| | |||  |||||||||||| |||||||||    
T  38868919 ggcttaggtggtttgggcatgtagagagaacactagtagattctctagcgaggagagtagattagatggagg 38868990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 39422276 - 39422217
Alignment:
Q  14 ttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||| |||||| ||||||| | ||||||||||||||| |||||| ||||||| |||||||    
T  39422276 ttggacatgtagagagaagacatgtagattatgtagttaggagaatagatcatatggagg 39422217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 46394874 - 46394928
Alignment:
Q  19 catgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||||| ||||||| | |||||||| ||||||||||||||||| |||| ||||||    
T  46394874 catgtagagagaagacttgtagattctgtagtaaggagagtagctcagttggagg 46394928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 59
Target Start/End: Complemental strand, 854030 - 853973
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagt 59  Q
    |||||||||||||| |||||||| |||||   | || |||||||||||||||||||||    
T  854030 ggcttaggtggtttaggcatgtagagagataacatgaagattatgtagtaaggagagt 853973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8671954 - 8672027
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||||||||||| |||||||  | ||||||   || ||||| ||||||||||| ||||||||    
T  8671954 aggcttagatggtttgggcatgtagagagaagatccgtagatgccgtggtaagaagagtagatcaaatggagga 8672027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 9509354 - 9509427
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||||| ||||||||||||| ||||||| || ||| ||  | |||||   ||||||||||||||||||||    
T  9509354 aggcttaggtagtttgggcatgtagagagaagaccggtatatgctttagtacttagagtagatcagatggagga 9509427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 9592770 - 9592843
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||| ||||||||||| ||||||| || ||||||   || ||||| ||||||||||| ||||||||    
T  9592770 aggcttagatgggttgggcatgtagagagaagacccgtagatgccgtggtaagaagagtagatcaaatggagga 9592843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 76
Target Start/End: Original strand, 11584081 - 11584154
Alignment:
Q  3 gcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||||||||||||| |||| ||| | ||||| || |  | ||||||||||||||  |||||||||||    
T  11584081 gcttaggtggtttgggcatgtgaagaaaagacttgtagtttctacaataaggagagtagatatgatggaggata 11584154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 27637876 - 27637815
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatca 65  Q
    |||||||| |||||||||||| ||| ||| | ||| |||  |||||||||||||||||||||    
T  27637876 cttaggtgttttgggcatgtagagaaaagacatgtggatgttgtagtaaggagagtagatca 27637815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 28528394 - 28528463
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||||||||||| |||||||   |||||| | ||| |||| ||||||||||| ||||||||| |||||||    
T  28528394 cttaggtggtttcggcatgtcgggagaagacttgtggattctgtagtaaggacagtagatcaaatggagg 28528463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 32231200 - 32231127
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||||||||||| ||||||| | |||||||   ||  |||| ||||||||||| ||||||||    
T  32231200 aggcttagatggtttgggcatgtagagagaagacttgtagatgccgtcataagaagagtagatcaaatggagga 32231127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 43240625 - 43240552
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| | ||||| ||||||| ||||||| || ||||||  ||| ||||| ||||||||||| ||||||||    
T  43240625 aggcttagatagtttgagcatgtagagagaagacccgtagatgttgtggtaagaagagtagatcaaatggagga 43240552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 52832085 - 52832154
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    ||||||||||||||||||| |||||||| ||  |||||  ||| |||  |||||||||| ||||||||||    
T  52832085 ttaggtggtttgggcatgttaagagaagaccgatagatgttgttgtacagagagtagataagatggagga 52832154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 19969435 - 19969367
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||||||  | |||| ||||||| | | | |||||||| ||||||||| |||||||||||||||    
T  19969435 ttaggtggtttgcacgtgtagagagaagacttatggattatgtggtaaggagactagatcagatggagg 19969367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 42501144 - 42501216
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||||| |||||||||| |||||| |||  || || || |||| ||||| ||||||||||| |||||||||||    
T  42501144 aggcttgggtggtttggacatgtagagaagagacccgtggattctgtagaaaggagagtagttcagatggagg 42501216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 9593952 - 9593879
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||||||||||||||||||| ||||||| | |||||||  ||||||||| ||||||||||||||||||||    
T  9593952 aggcttaggtggtttgggcatgtagagagaagacatgtagatgctgtagtaagaagagtagatcagatggagga 9593879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 579460 - 579529
Alignment:
Q  7 aggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||| ||||| ||||||| ||||||||| |||||||||| ||||||||||||| ||||||||||||||||    
T  579460 aggtagtttgagcatgtagagagaaggcttgtagattatatagtaaggagagttgatcagatggaggata 579529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 7 - 76
Target Start/End: Complemental strand, 6293626 - 6293557
Alignment:
Q  7 aggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||||||||| ||||||  ||||||||||||||| ||||||||||| |||||||| ||||||    
T  6293626 aggtggtttgggcatgtagagagaacacctgtagattatgtaataaggagagtaaatcagatgaaggata 6293557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 24665846 - 24665915
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtaga-ttatgtagtaaggagagtagatcagatg 69  Q
    ||||||||||||||||| |||||| ||||||| |||||||| || |||||||||||||||||||||||||    
T  24665846 aggcttaggtggtttggacatgtagagagaagacctgtagatttttgtagtaaggagagtagatcagatg 24665915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 14389411 - 14389339
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||||| |||||| ||||||| ||| |||| | ||||||||||||| ||||||||||||||||||    
T  14389411 cttaggtggtttggacatgtagagagaagacctatagactttgtagtaaggagaatagatcagatggaggata 14389339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 34739 - 34676
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcaga 67  Q
    ||||||||| ||||||||||| |||||| || || |||||||||||||| ||||||||||||||    
T  34739 cttaggtgggttgggcatgtagagagaaagcttggagattatgtagtaacgagagtagatcaga 34676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 31832105 - 31832030
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||| ||||||||| |||||| |||||||| | | ||||||| ||| ||| ||||||||||||||||||||||    
T  31832105 aggcttaagtggtttggacatgtagagagaaggtccggagattatatagcaagtagagtagatcagatggaggata 31832030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 2079376 - 2079448
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||| ||||||| || ||||| |||||||   ||||||||||||||||||||||||| || |||||||||    
T  2079376 aggcttaagtggtttaggtatgtagagagaagatttgtagattatgtagtaaggagagtaaattagatggagg 2079448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 6907073 - 6907005
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatg 69  Q
    ||||||| || ||||||  ||||| ||||||| | |||||||| |||||||||||||||||||||||||    
T  6907073 aggcttacgtagtttggttatgtagagagaagacatgtagattttgtagtaaggagagtagatcagatg 6907005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 21870295 - 21870240
Alignment:
Q  17 ggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggag 72  Q
    ||||| || ||||||| |||||||||| ||||||||||||||||||| ||||||||    
T  21870295 ggcatttagagagaagacctgtagattttgtagtaaggagagtagataagatggag 21870240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 32913507 - 32913436
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||||||||||||||| |||||| ||| |||   |||||||||||||| |||||||||| || |||||||||    
T  32913507 ggcttaggtggtttggccatgtagagaaaagagttgtagattatgtagcaaggagagtatattagatggagg 32913436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 4948513 - 4948475
Alignment:
Q  38 tagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  4948513 tagattatgtagtaaggagagtagatcagatggaagata 4948475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 4955484 - 4955446
Alignment:
Q  38 tagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  4955484 tagattatgtagtaaggagagtagatcagatggaagata 4955446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 5258394 - 5258321
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| |||||||| |||||| ||||||| || |||||||  || ||||| ||||||||||| ||||||||    
T  5258394 aggcttagatggtttggacatgtagagagaagacccgtagattccgttgtaagaagagtagatcaaatggagga 5258321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 12 - 76
Target Start/End: Original strand, 5897524 - 5897588
Alignment:
Q  12 gtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||||| |||||||   |||| ||| ||||||| |||||||||||| |||||||||||    
T  5897524 gtttgggcatgtagagagaagatatgtatattttgtagtatggagagtagatcggatggaggata 5897588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 7150563 - 7150508
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagta 60  Q
    ||||||||||||||||||   ||||||| | |||||||||| ||||||||||||||    
T  7150563 ttaggtggtttgggcatggggagagaagacttgtagattatatagtaaggagagta 7150508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 33997786 - 33997733
Alignment:
Q  3 gcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggag 56  Q
    |||||||||||||||||||||| |  |||| ||| |||||| ||||||||||||    
T  33997786 gcttaggtggtttgggcatgtagaaggaagacctatagattttgtagtaaggag 33997733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 9749466 - 9749406
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatca 65  Q
    ||||||||||| || ||||| ||||||| | |||||||| | ||||||| |||||||||||    
T  9749466 ttaggtggtttagggatgtagagagaagtcatgtagattttatagtaagaagagtagatca 9749406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 2e-19; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 39235174 - 39235247
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||||||||||||||||||| ||||||| |||||||||  ||||||| | ||||||||||||||||||||    
T  39235174 aggcttaggtggtttgggcatgtagagagaagacctgtagatgttgtagtacgaagagtagatcagatggagga 39235247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 39600925 - 39600852
Alignment:
Q  3 gcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||||| |||||||||||||||| |||||||||| |||||  ||||||||||||||||| |||||||    
T  39600925 gcttaggtggttttggcatgtaaagagaagacctgtagattctgtagcgaggagagtagatcagatcgaggata 39600852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 45289337 - 45289262
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||||||||||| ||| ||||||  | |||||||| ||||||||| ||||||||||||||||||||||    
T  45289337 aggcttaggtggtttgggcacgtagagagaacacttgtagattttgtagtaagaagagtagatcagatggaggata 45289262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 21200587 - 21200655
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggag 72  Q
    ||||||||||||||||||||| ||||||| | |||||||| || |||||||||||||||||| ||||||    
T  21200587 cttaggtggtttgggcatgtagagagaagacatgtagattctgcagtaaggagagtagatcacatggag 21200655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 42510260 - 42510187
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||||||||| ||||||  |||||| ||| |||||| ||| ||||||||||||||||||||||||||||    
T  42510260 aggcttaggtggtttggacatgta--gagaagacctatagattttgtggtaaggagagtagatcagatggaggata 42510187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 46431918 - 46431845
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggatac 77  Q
    ||||||||||||||||||||||| |||| |   ||||||||| ||||||||||||||||||| |||||||||||||    
T  46431918 ggcttaggtggtttgggcatgtagagaggat--ctgtagattctgtagtaaggagagtagataagatggaggatac 46431845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 54128414 - 54128486
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||||||||||||||||||||||| ||| ||| ||||||||| ||| |||| | |||||||||||||||||||    
T  54128414 aggcttaggtggtttgggcatgtagagaaaagacctgtagatgatgcagtacgtagagtagatcagatggagg 54128486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 30573040 - 30572970
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||||  |||||| ||||||| ||| |||||||||||||||||||| ||||||||||||||||||    
T  30573040 ttaggtggtttgatcatgtagagagaagacctatagattatgtagtaaggaga-tagatcagatggaggata 30572970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 42026782 - 42026707
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||||||| || |||| ||||||  | |||||||||| ||||||||||||||||||||| ||||||||    
T  42026782 aggcttaggtggtttgagcttgtagagagaaaacttgtagattatttagtaaggagagtagatcagacggaggata 42026707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 19737037 - 19737106
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||||||| ||||| | ||||||| |||||||||  ||||||||| ||||||||||||||||||||    
T  19737037 ttaggtggtttgagcatgcagagagaagacctgtagatgttgtagtaagaagagtagatcagatggagga 19737106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 19757940 - 19758009
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||||||| ||||| | ||||||| |||||||||  ||||||||| ||||||||||||||||||||    
T  19757940 ttaggtggtttgagcatgcagagagaagacctgtagatgttgtagtaagaagagtagatcagatggagga 19758009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 75
Target Start/End: Complemental strand, 33755579 - 33755514
Alignment:
Q  10 tggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggat 75  Q
    |||||||| |||||| || ||||||||||||||| |||| | ||||||||||||||||||||||||    
T  33755579 tggtttggacatgtagagcgaaggcctgtagattttgtacttaggagagtagatcagatggaggat 33755514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 48508271 - 48508344
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||||||||||| ||||||| || ||||||  ||| ||||| ||||||||||||||||||||    
T  48508271 aggcttagatggtttgggcatgtagagagaagacccgtagatgttgtcgtaagaagagtagatcagatggagga 48508344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 36820207 - 36820143
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatca 65  Q
    ||||||||||||||| | |||||||||||||| ||  ||||||||||||||||||| ||||||||    
T  36820207 aggcttaggtggtttagacatgtaaagagaagacccatagattatgtagtaaggagggtagatca 36820143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 41842754 - 41842682
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||||||| ||||| |||||||  | ||||||| |||||||| |||||||||||| ||||||||||    
T  41842754 cttaggtggtttgggtatgtagagagaagagcggtagattctgtagtaatgagagtagatcaaatggaggata 41842682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 50249430 - 50249498
Alignment:
Q  8 ggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||||||||| || |||| | |||||||| | |||||||||||||||||||||||| |||||    
T  50249430 ggtggtttgggcatgtagagtgaagacatgtagattctttagtaaggagagtagatcagatgggggata 50249498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 48734381 - 48734310
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggag 72  Q
    |||||||||||||||||||||||| |||||||  |||||||   ||||||| | ||||||||||||||||||    
T  48734381 aggcttaggtggtttgggcatgtagagagaagaactgtagaggctgtagtacgaagagtagatcagatggag 48734310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 2 - 76
Target Start/End: Complemental strand, 3870689 - 3870615
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||| |||||| |||||||| ||||||| | |||||||| | |||| ||||||||| |||||||||||||||    
T  3870689 ggcttagatggttttggcatgtagagagaagacttgtagattctatagttaggagagtaaatcagatggaggata 3870615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 29374973 - 29375041
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggag 72  Q
    |||||||| ||||||| |||| ||| ||| |||||||||| |||||||||||| |||||| ||||||||    
T  29374973 cttaggtgatttgggcttgtagagaaaagacctgtagattttgtagtaaggagtgtagattagatggag 29375041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 7278504 - 7278567
Alignment:
Q  9 gtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggag 72  Q
    |||||||||||||||| |||| |  |||||||||| ||||| |||||||||||||| |||||||    
T  7278504 gtggtttgggcatgtagagagcaaacctgtagattttgtagcaaggagagtagatcggatggag 7278567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 34719315 - 34719252
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcaga 67  Q
    |||||||| ||||  ||| || ||||||||||||| |||| |||||||||||||||||||||||    
T  34719315 cttaggtgttttgaacatatagagagaaggcctgttgattttgtagtaaggagagtagatcaga 34719252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 31261185 - 31261115
Alignment:
Q  3 gcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||||| ||||||||||||||  |||||||   |||||||| |||||||| | ||||||||||||||||||    
T  31261185 gcttagatggtttgggcatgttgagagaagatatgtagattttgtagtaatgtgagtagatcagatggagg 31261115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 43308617 - 43308671
Alignment:
Q  19 catgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||||||||| ||| | |||||||| |||||||| ||||||||||||||||||||    
T  43308617 catgtaaagaaaagacatgtagattttgtagtaatgagagtagatcagatggagg 43308671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 11581483 - 11581548
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatg 69  Q
    ||||||||||||||| ||||| ||||||| | |||  ||||||||||||| |||||| ||||||||    
T  11581483 cttaggtggtttgggtatgtagagagaagacatgtgaattatgtagtaagaagagtacatcagatg 11581548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 37598412 - 37598347
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatg 69  Q
    |||||||||||||| |||||| |||||| |   || |||||||||||||| |||||||||||||||    
T  37598412 cttaggtggtttggccatgtatagagaatgtacgtggattatgtagtaagaagagtagatcagatg 37598347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 38430884 - 38430957
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||||| | ||||||||||| ||||| | |||| ||||  ||||||| | ||||||||||||||||||||    
T  38430884 aggcttaggttgattgggcatgtagagagacgacctgcagatgttgtagtatgaagagtagatcagatggagga 38430957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 36304018 - 36304086
Alignment:
Q  5 ttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    |||| ||| ||||||||||| ||||||| |||||||||  | ||||||||||| |||||||||| ||||    
T  36304018 ttagatgggttgggcatgtagagagaagacctgtagatgctttagtaaggagaatagatcagatagagg 36304086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 69
Target Start/End: Original strand, 14783634 - 14783665
Alignment:
Q  38 tagattatgtagtaaggagagtagatcagatg 69  Q
    ||||||||||||||||||||||||||||||||    
T  14783634 tagattatgtagtaaggagagtagatcagatg 14783665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 76
Target Start/End: Original strand, 44571507 - 44571550
Alignment:
Q  33 gcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    ||||||||||| ||||||||||||||||||||| ||||| ||||    
T  44571507 gcctgtagattttgtagtaaggagagtagatcaaatggatgata 44571550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 46568145 - 46568216
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggat 75  Q
    ||||| || |||||||||||| ||| ||| | |||  | ||||||||||||||||||||||| |||||||||    
T  46568145 cttagttgatttgggcatgtagagaaaagtcatgtgaactatgtagtaaggagagtagatcacatggaggat 46568216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 2968248 - 2968318
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggag 72  Q
    |||||||||  |||||||||||| |||||||  |  |||||| ||||||||||||||| |||| |||||||    
T  2968248 ggcttaggttatttgggcatgtagagagaagatccatagattttgtagtaaggagagttgatcggatggag 2968318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 76
Target Start/End: Complemental strand, 23534775 - 23534741
Alignment:
Q  42 ttatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||||||||||||||||||||| ||||    
T  23534775 ttatgtagtaaggagagtagatcagatggatgata 23534741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 659563 - 659632
Alignment:
Q  3 gcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggag 72  Q
    |||||||||||||||||||||| ||||||    |||||||| ||||||||| ||||| || |||| ||||    
T  659563 gcttaggtggtttgggcatgtagagagaaaatttgtagattctgtagtaagcagagttgaccagagggag 659632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 31454466 - 31454401
Alignment:
Q  8 ggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||| ||||||| |||||||   ||  |||| |||||| ||||||||||||||||||||||    
T  31454466 ggtggtttgtgcatgtagagagaagaaatgcggattctgtagttaggagagtagatcagatggagg 31454401  T

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Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 52138836 - 52138877
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagat 42  Q
    |||||||| ||||||||||||||| ||||||| |||||||||    
T  52138836 aggcttagatggtttgggcatgtagagagaagacctgtagat 52138877  T

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Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 19676325 - 19676253
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||||||| | |||||||| ||||||| |||||||||  |||||||   |||| ||||||||| |||||    
T  19676325 ggcttaggtggtattggcatgtagagagaagacctgtagatgctgtagtacaaagagaagatcagatagagga 19676253  T

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Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 54365221 - 54365146
Alignment:
Q  3 gcttaggtggtttgggcatgt--aaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||||||||||||  | ||||||  |||||||||| | |  |||||||||||||||| ||| ||||||    
T  54365221 gcttaggtggtttgggcatgtagagagagaatacctgtagattctattataaggagagtagatcaaatgaaggata 54365146  T

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Target: scaffold0018 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 44114 - 44039
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggaggata 76  Q
    |||||||||||||||||||||||| ||||||| |||  ||||| | ||||||||||||||||  ||||||||||||    
T  44114 aggcttaggtggtttgggcatgtagagagaagaccttcagattctctagtaaggagagtagactagatggaggata 44039  T

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Target: scaffold0018; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 31504 - 31577
Alignment:
Q  1 aggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagga 74  Q
    |||||||| ||||||||||||||| ||||||| || ||||||    | ||||| ||||||||||| ||||||||    
T  31504 aggcttagatggtttgggcatgtagagagaagacccgtagatgccatggtaagaagagtagatcaaatggagga 31577  T

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Target: scaffold0003 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 347018 - 346947
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||||||||||| ||||| ||||||  ||| |||||| ||||||||||||||| |||||||||||||    
T  347018 ggcttaggtggtttgggtatgtagagagaaaacctatagattctgtagtaaggagagttgatcagatggagg 346947  T

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Target: scaffold0325 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 11835 - 11905
Alignment:
Q  2 ggcttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagatggagg 73  Q
    ||||||||||||||||||||||| |||||||  ||||||  |||||| | ||||||||||||| | ||||||    
T  11835 ggcttaggtggtttgggcatgtagagagaagatctgtag-ctatgtattgaggagagtagatccggtggagg 11905  T

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Target: scaffold0050 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 45671 - 45607
Alignment:
Q  4 cttaggtggtttgggcatgtaaagagaaggcctgtagattatgtagtaaggagagtagatcagat 68  Q
    ||||||| |||||  |||||| |||||| | || || ||| ||||||||||||||||||||||||    
T  45671 cttaggttgtttgaacatgtagagagaatgtctataaattttgtagtaaggagagtagatcagat 45607  T

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