View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8961_low_44 (Length: 295)

Name: NF8961_low_44
Description: NF8961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8961_low_44
NF8961_low_44
[»] scaffold0094 (2 HSPs)
scaffold0094 (188-295)||(30655-30762)
scaffold0094 (188-295)||(41620-41727)
[»] chr4 (27 HSPs)
chr4 (188-295)||(14925000-14925107)
chr4 (188-295)||(19737962-19738071)
chr4 (188-295)||(50187786-50187896)
chr4 (188-295)||(20548384-20548492)
chr4 (188-295)||(16728754-16728861)
chr4 (188-295)||(3389145-3389255)
chr4 (232-295)||(4619223-4619286)
chr4 (188-295)||(15580437-15580544)
chr4 (188-295)||(16720731-16720838)
chr4 (232-295)||(20555008-20555071)
chr4 (188-295)||(15879998-15880107)
chr4 (188-295)||(3382397-3382507)
chr4 (188-295)||(39534178-39534286)
chr4 (252-295)||(39745440-39745483)
chr4 (241-295)||(22175846-22175900)
chr4 (255-295)||(55793251-55793291)
chr4 (254-295)||(3439629-3439670)
chr4 (259-295)||(12427139-12427175)
chr4 (255-295)||(25984372-25984412)
chr4 (259-295)||(41148982-41149018)
chr4 (188-295)||(4619891-4619998)
chr4 (259-295)||(3836829-3836865)
chr4 (259-295)||(13100673-13100709)
chr4 (259-295)||(18389085-18389121)
chr4 (259-295)||(20842697-20842733)
chr4 (259-295)||(22703457-22703493)
chr4 (259-295)||(22712428-22712464)
[»] chr6 (34 HSPs)
chr6 (189-295)||(22059714-22059820)
chr6 (188-295)||(15666220-15666327)
chr6 (188-295)||(18960951-18961059)
chr6 (188-295)||(19713683-19713792)
chr6 (188-295)||(19719839-19719948)
chr6 (188-295)||(12667490-12667600)
chr6 (188-295)||(28702840-28702950)
chr6 (188-295)||(22779095-22779202)
chr6 (249-295)||(26896470-26896516)
chr6 (188-295)||(19169109-19169217)
chr6 (188-290)||(14176931-14177036)
chr6 (232-295)||(20452657-20452720)
chr6 (237-295)||(20058842-20058900)
chr6 (251-295)||(20459477-20459521)
chr6 (231-295)||(22631697-22631761)
chr6 (259-295)||(24143592-24143628)
chr6 (259-295)||(24150082-24150118)
chr6 (232-294)||(10985074-10985136)
chr6 (192-295)||(17784028-17784133)
chr6 (188-295)||(19898953-19899062)
chr6 (237-295)||(20050979-20051037)
chr6 (255-295)||(1549206-1549246)
chr6 (259-295)||(8275507-8275543)
chr6 (259-295)||(16816883-16816919)
chr6 (259-295)||(16825638-16825674)
chr6 (259-295)||(18965559-18965595)
chr6 (260-295)||(27509376-27509411)
chr6 (260-295)||(27517313-27517348)
chr6 (241-295)||(615927-615981)
chr6 (241-295)||(623828-623882)
chr6 (254-295)||(21961610-21961651)
chr6 (255-295)||(12391060-12391100)
chr6 (267-295)||(16496415-16496443)
chr6 (259-295)||(30437383-30437419)
[»] chr2 (24 HSPs)
chr2 (189-295)||(44370270-44370376)
chr2 (188-295)||(20279287-20279394)
chr2 (188-295)||(18242-18351)
chr2 (188-295)||(5871064-5871173)
chr2 (188-295)||(5874205-5874314)
chr2 (188-295)||(18500229-18500338)
chr2 (188-295)||(36735336-36735445)
chr2 (236-295)||(22518966-22519025)
chr2 (232-295)||(11873685-11873748)
chr2 (252-295)||(38084487-38084530)
chr2 (188-295)||(45498930-45499037)
chr2 (188-295)||(12370408-12370516)
chr2 (231-295)||(21064689-21064753)
chr2 (190-295)||(27343915-27344020)
chr2 (254-295)||(25036877-25036918)
chr2 (254-295)||(25040984-25041025)
chr2 (259-295)||(39649669-39649705)
chr2 (259-295)||(44299962-44299998)
chr2 (244-295)||(45489341-45489392)
chr2 (259-295)||(12374557-12374593)
chr2 (259-295)||(12388384-12388420)
chr2 (259-295)||(22934225-22934261)
chr2 (259-295)||(22940188-22940224)
chr2 (259-295)||(22954083-22954119)
[»] chr3 (46 HSPs)
chr3 (188-295)||(15610444-15610551)
chr3 (188-295)||(15579394-15579501)
chr3 (188-295)||(14893101-14893208)
chr3 (188-295)||(14887996-14888103)
chr3 (188-295)||(43097564-43097671)
chr3 (188-295)||(13111740-13111849)
chr3 (188-295)||(23288076-23288184)
chr3 (188-295)||(14881270-14881377)
chr3 (188-295)||(13105592-13105701)
chr3 (232-295)||(16031258-16031321)
chr3 (232-295)||(21638560-21638623)
chr3 (188-295)||(4313548-4313657)
chr3 (251-295)||(261367-261411)
chr3 (188-295)||(12550414-12550522)
chr3 (231-295)||(13086557-13086621)
chr3 (232-295)||(18706270-18706332)
chr3 (188-295)||(30102407-30102514)
chr3 (192-295)||(68148-68252)
chr3 (192-295)||(74241-74345)
chr3 (188-295)||(8612625-8612733)
chr3 (188-295)||(14252403-14252511)
chr3 (251-295)||(48060748-48060792)
chr3 (252-295)||(11180763-11180806)
chr3 (241-295)||(37470142-37470196)
chr3 (241-295)||(49967357-49967411)
chr3 (254-295)||(3404755-3404796)
chr3 (188-295)||(46393320-46393426)
chr3 (188-295)||(46401068-46401174)
chr3 (259-295)||(5651850-5651886)
chr3 (188-295)||(8606165-8606273)
chr3 (259-295)||(8804206-8804242)
chr3 (259-295)||(8812606-8812642)
chr3 (259-295)||(11630009-11630045)
chr3 (259-295)||(15529068-15529104)
chr3 (259-295)||(15537758-15537794)
chr3 (188-295)||(20603944-20604052)
chr3 (259-295)||(21607455-21607491)
chr3 (263-295)||(33814598-33814630)
chr3 (259-295)||(46371175-46371211)
chr3 (259-295)||(46385302-46385338)
chr3 (259-294)||(21616084-21616119)
chr3 (241-295)||(37256103-37256157)
chr3 (241-295)||(37265939-37265993)
chr3 (259-295)||(6193987-6194023)
chr3 (259-295)||(6201570-6201606)
chr3 (267-295)||(11325852-11325880)
[»] chr7 (22 HSPs)
chr7 (195-295)||(43906102-43906202)
chr7 (188-295)||(34132775-34132884)
chr7 (188-295)||(22346870-22346978)
chr7 (188-295)||(1858520-1858629)
chr7 (188-289)||(13270840-13270943)
chr7 (188-295)||(34139087-34139196)
chr7 (188-295)||(15683155-15683261)
chr7 (259-295)||(42631285-42631321)
chr7 (252-295)||(18779084-18779127)
chr7 (257-295)||(6852037-6852075)
chr7 (188-295)||(28415153-28415262)
chr7 (259-295)||(4847173-4847209)
chr7 (259-295)||(6113645-6113681)
chr7 (255-295)||(15767129-15767169)
chr7 (260-295)||(36898428-36898463)
chr7 (241-295)||(23878703-23878757)
chr7 (259-295)||(5651553-5651589)
chr7 (259-295)||(16388561-16388597)
chr7 (259-295)||(16402672-16402708)
chr7 (267-295)||(17016388-17016416)
chr7 (259-295)||(30365040-30365076)
chr7 (259-295)||(30379104-30379140)
[»] scaffold0014 (1 HSPs)
scaffold0014 (188-295)||(3769-3876)
[»] scaffold0167 (1 HSPs)
scaffold0167 (188-295)||(7983-8090)
[»] chr8 (19 HSPs)
chr8 (188-295)||(14891817-14891924)
chr8 (188-295)||(22162940-22163049)
chr8 (188-295)||(15061289-15061398)
chr8 (188-295)||(32025607-32025716)
chr8 (188-295)||(20733163-20733270)
chr8 (232-295)||(22156977-22157040)
chr8 (240-293)||(6030853-6030906)
chr8 (254-295)||(24487937-24487978)
chr8 (188-295)||(20725201-20725308)
chr8 (188-295)||(20738099-20738206)
chr8 (252-295)||(25859294-25859337)
chr8 (259-295)||(15707141-15707177)
chr8 (259-295)||(18433033-18433069)
chr8 (259-295)||(23267953-23267989)
chr8 (241-295)||(12307680-12307734)
chr8 (249-295)||(25642952-25642998)
chr8 (254-295)||(23816699-23816740)
chr8 (259-295)||(39631550-39631586)
chr8 (259-295)||(39641098-39641134)
[»] scaffold0540 (1 HSPs)
scaffold0540 (188-295)||(2862-2969)
[»] chr1 (21 HSPs)
chr1 (188-295)||(22840102-22840211)
chr1 (188-295)||(35070038-35070147)
chr1 (188-295)||(22116304-22116413)
chr1 (188-295)||(1961641-1961748)
chr1 (232-295)||(19367478-19367541)
chr1 (232-295)||(20429356-20429419)
chr1 (251-295)||(2336075-2336119)
chr1 (232-295)||(13185786-13185849)
chr1 (188-295)||(18098378-18098487)
chr1 (188-295)||(44832509-44832618)
chr1 (188-287)||(47108384-47108484)
chr1 (188-295)||(13450038-13450145)
chr1 (240-295)||(39454384-39454439)
chr1 (237-295)||(16884521-16884579)
chr1 (259-295)||(5624228-5624264)
chr1 (259-295)||(5638367-5638403)
chr1 (259-295)||(20979997-20980033)
chr1 (259-295)||(22570920-22570956)
chr1 (259-295)||(25926805-25926841)
chr1 (188-287)||(1955829-1955928)
chr1 (254-295)||(20518284-20518325)
[»] scaffold0473 (1 HSPs)
scaffold0473 (188-295)||(9118-9225)
[»] scaffold0016 (1 HSPs)
scaffold0016 (188-295)||(14102-14209)
[»] chr5 (40 HSPs)
chr5 (188-295)||(23378256-23378363)
chr5 (188-295)||(20092706-20092815)
chr5 (190-295)||(36448252-36448359)
chr5 (188-295)||(40014879-40014987)
chr5 (188-295)||(25526191-25526300)
chr5 (188-295)||(26186602-26186711)
chr5 (191-295)||(15956937-15957044)
chr5 (188-295)||(37048347-37048454)
chr5 (188-295)||(20099603-20099712)
chr5 (188-295)||(25532871-25532980)
chr5 (188-295)||(36454630-36454739)
chr5 (189-295)||(20639817-20639925)
chr5 (259-295)||(21688156-21688192)
chr5 (259-295)||(21696075-21696111)
chr5 (218-295)||(23577423-23577502)
chr5 (259-295)||(26553292-26553328)
chr5 (243-295)||(29901232-29901284)
chr5 (244-295)||(25677874-25677925)
chr5 (188-295)||(7255025-7255131)
chr5 (188-295)||(7262467-7262573)
chr5 (259-295)||(12387278-12387314)
chr5 (259-295)||(12395971-12396007)
chr5 (259-295)||(15779770-15779806)
chr5 (259-295)||(15794005-15794041)
chr5 (259-295)||(17947987-17948023)
chr5 (259-295)||(17961877-17961913)
chr5 (259-295)||(31511209-31511245)
chr5 (259-295)||(31525333-31525369)
chr5 (260-295)||(7786441-7786476)
chr5 (260-295)||(7794291-7794326)
chr5 (241-295)||(11939622-11939676)
chr5 (259-295)||(5435751-5435787)
chr5 (259-295)||(5449571-5449607)
chr5 (267-295)||(21728986-21729014)
chr5 (259-295)||(25450636-25450672)
chr5 (259-295)||(34314273-34314309)
chr5 (259-295)||(36371315-36371351)
chr5 (259-295)||(36385243-36385279)
chr5 (259-295)||(36995978-36996014)
chr5 (259-295)||(37009916-37009952)
[»] scaffold0378 (3 HSPs)
scaffold0378 (188-295)||(773-881)
scaffold0378 (260-295)||(3339-3374)
scaffold0378 (260-295)||(15819-15854)
[»] scaffold0101 (1 HSPs)
scaffold0101 (188-295)||(16492-16600)
[»] scaffold0351 (1 HSPs)
scaffold0351 (188-295)||(7596-7703)
[»] scaffold0503 (2 HSPs)
scaffold0503 (188-295)||(1870-1979)
scaffold0503 (188-295)||(6437-6546)
[»] scaffold0028 (1 HSPs)
scaffold0028 (188-295)||(65841-65950)
[»] scaffold0046 (1 HSPs)
scaffold0046 (188-295)||(86649-86759)
[»] scaffold0027 (2 HSPs)
scaffold0027 (188-295)||(23586-23694)
scaffold0027 (241-295)||(398-452)
[»] scaffold0290 (1 HSPs)
scaffold0290 (232-295)||(22049-22112)
[»] scaffold0001 (1 HSPs)
scaffold0001 (232-295)||(96785-96848)
[»] scaffold0320 (1 HSPs)
scaffold0320 (188-295)||(6274-6383)
[»] scaffold0253 (2 HSPs)
scaffold0253 (188-295)||(10342-10451)
scaffold0253 (188-295)||(19767-19876)
[»] scaffold0039 (1 HSPs)
scaffold0039 (188-295)||(89827-89936)
[»] scaffold0441 (1 HSPs)
scaffold0441 (226-295)||(2474-2543)
[»] scaffold1922 (1 HSPs)
scaffold1922 (190-295)||(171-278)
[»] scaffold0050 (2 HSPs)
scaffold0050 (188-295)||(41219-41327)
scaffold0050 (252-295)||(27735-27778)
[»] scaffold0032 (1 HSPs)
scaffold0032 (188-295)||(29067-29175)
[»] scaffold0150 (1 HSPs)
scaffold0150 (252-295)||(38618-38661)
[»] scaffold0085 (1 HSPs)
scaffold0085 (232-295)||(7798-7861)
[»] scaffold0505 (1 HSPs)
scaffold0505 (231-295)||(11473-11537)
[»] scaffold0328 (1 HSPs)
scaffold0328 (188-295)||(129-239)
[»] scaffold0068 (2 HSPs)
scaffold0068 (259-295)||(17799-17835)
scaffold0068 (259-295)||(25718-25754)
[»] scaffold0029 (3 HSPs)
scaffold0029 (251-295)||(38091-38135)
scaffold0029 (259-295)||(20215-20251)
scaffold0029 (259-295)||(33956-33992)
[»] scaffold0458 (1 HSPs)
scaffold0458 (240-295)||(9279-9334)
[»] scaffold0435 (1 HSPs)
scaffold0435 (244-295)||(8384-8435)
[»] scaffold0306 (1 HSPs)
scaffold0306 (188-295)||(15647-15756)
[»] scaffold0630 (1 HSPs)
scaffold0630 (252-289)||(1397-1434)
[»] scaffold0243 (1 HSPs)
scaffold0243 (234-295)||(20795-20856)
[»] scaffold1888 (1 HSPs)
scaffold1888 (188-295)||(1004-1112)
[»] scaffold1719 (1 HSPs)
scaffold1719 (259-295)||(17-53)
[»] scaffold0605 (1 HSPs)
scaffold0605 (255-295)||(9360-9400)
[»] scaffold0431 (1 HSPs)
scaffold0431 (259-295)||(2800-2836)
[»] scaffold0182 (1 HSPs)
scaffold0182 (259-295)||(1718-1754)
[»] scaffold0104 (1 HSPs)
scaffold0104 (239-295)||(38545-38601)
[»] scaffold0064 (1 HSPs)
scaffold0064 (259-295)||(9209-9245)
[»] scaffold0498 (1 HSPs)
scaffold0498 (232-295)||(10396-10459)
[»] scaffold0362 (1 HSPs)
scaffold0362 (244-295)||(4805-4856)
[»] scaffold0183 (1 HSPs)
scaffold0183 (266-295)||(20682-20711)
[»] scaffold1634 (1 HSPs)
scaffold1634 (259-295)||(1000-1036)
[»] scaffold0755 (1 HSPs)
scaffold0755 (259-295)||(966-1002)
[»] scaffold0011 (2 HSPs)
scaffold0011 (259-295)||(202701-202737)
scaffold0011 (259-295)||(208778-208814)


Alignment Details
Target: scaffold0094 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 30655 - 30762
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    ||||||||||||||||||| || ||| |||||||||| |||||||||||||||||| ||| ||||| |||| ||||||||||||||||||||||||||||    
T  30655 tgaggtattttaaaatacctccctgccgaatttttactaaaacgtcagagattgattagggttaagcgacacgtgtcagtgggaccttaggtcaaaaatt 30754  T
Q  288 ggggtatg 295  Q
    ||||||||    
T  30755 ggggtatg 30762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 41620 - 41727
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    ||||||||||||||||| | || ||| |||||||||| |||||||||||||||||| ||| ||||| |||| |||| |||||||||||||||||||||||    
T  41620 tgaggtattttaaaatagctccctgccgaatttttactaaaacgtcagagattgattagggttaagcgacacgtgttagtgggaccttaggtcaaaaatt 41719  T
Q  288 ggggtatg 295  Q
    ||||||||    
T  41720 ggggtatg 41727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 4e-35; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 14925107 - 14925000
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    ||||||||||||||||||| || ||| |||||||||| |||||||||||||||||||||| ||||| |||| |||||||||||||||||||| |||||||    
T  14925107 tgaggtattttaaaatacctccctgccgaatttttactaaaacgtcagagattgatcagggttaagcgacacgtgtcagtgggaccttaggtaaaaaatt 14925008  T
Q  288 ggggtatg 295  Q
    ||||||||    
T  14925007 ggggtatg 14925000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 19737962 - 19738071
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || ||| ||||||||  || ||||  |||||||| ||||||  | |||||||||||||||||||| ||||||||||||||    
T  19737962 tgaggtattttaaaatacctccctgccgaattttttcactaaaaattcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaa 19738061  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  19738062 ttggggtatg 19738071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 50187896 - 50187786
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttacca---aaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaa 284  Q
    ||||||||||||||||||| || ||| ||||||||  ||   |||  |||||||||||||||  | |||||||||||||||||||| |||||||||||||    
T  50187896 tgaggtattttaaaatacctccctgccgaatttttttcactgaaaaatcagagattgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaa 50187797  T
Q  285 attggggtatg 295  Q
    |||||||||||    
T  50187796 attggggtatg 50187786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 20548492 - 20548384
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt-accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaat 286  Q
    ||||||||||||||||||| || ||  |||||||| ||  |||  |||||||| ||||||  | |||||||||||||||||||| |||||||||||||||    
T  20548492 tgaggtattttaaaatacctccctgtcgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 20548393  T
Q  287 tggggtatg 295  Q
    |||||||||    
T  20548392 tggggtatg 20548384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 16728754 - 16728861
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    |||||||||||||||||||  | ||| ||||||||||  |||||||||||| |||||||| || |  ||| ||||||||||||  ||||||| |||||||    
T  16728754 tgaggtattttaaaataccttcctgccgaatttttactgaaacgtcagagactgatcagggttcaacgacgtgtgtcagtggggtcttaggtaaaaaatt 16728853  T
Q  288 ggggtatg 295  Q
    ||||||||    
T  16728854 ggggtatg 16728861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 3389145 - 3389255
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt---accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaa 284  Q
    ||||||||||||||||||| || ||| ||||||||   ||  |||  ||| |||| |||||| ||  ||||||||||||||||||| |||||||||||||    
T  3389145 tgaggtattttaaaatacctccatgccgaattttttttactgaaaaatcaaagatcgatcagtatcgagtgacatgtgtcagtggggccttaggtcaaaa 3389244  T
Q  285 attggggtatg 295  Q
    |||||||||||    
T  3389245 attggggtatg 3389255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 4619286 - 4619223
Alignment:
Q  232 tcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||| |||| |||||||||||||||| |  ||||||||||||||||||||||    
T  4619286 tcagagattgatcagggttaaatgacatgtgtcagtggtattttaggtcaaaaattggggtatg 4619223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 15580437 - 15580544
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    ||||||||||||||||||| || ||| || |||| |   ||| ||||| || |||||||| | || ||||||| |||||||||| |||||||||||||||    
T  15580437 tgaggtattttaaaatacctccctgccgatttttcattgaaaagtcagggactgatcagggtcaaatgacatgcgtcagtgggatcttaggtcaaaaatt 15580536  T
Q  288 ggggtatg 295  Q
    ||||||||    
T  15580537 ggggtatg 15580544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 16720731 - 16720838
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    |||||||||||||||||||  | ||  ||||||||||  |||||||||||| |||||||| || |  ||| ||||||||| ||  |||||||||||||||    
T  16720731 tgaggtattttaaaataccttcctgtcgaatttttactgaaacgtcagagactgatcagggttcaacgacgtgtgtcagtcgggtcttaggtcaaaaatt 16720830  T
Q  288 ggggtatg 295  Q
    ||||||||    
T  16720831 ggggtatg 16720838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 20555071 - 20555008
Alignment:
Q  232 tcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||| ||||||  | |||||||||||||||||||| ||||||||||||||||||||||||    
T  20555071 tcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatg 20555008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 15879998 - 15880107
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattg--atcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || ||| ||||||||||  ||||||  |||| |   |||||| ||||  |||  ||||||||||||||||||||||||||    
T  15879998 tgaggtattttaaaatacctccctgccgaatttttactgaaacgtaggagactctaatcagggttaaacgacgcgtgtcagtgggaccttaggtcaaaaa 15880097  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  15880098 ttggggtatg 15880107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 3382397 - 3382507
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt---accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaa 284  Q
    ||||||||||||||||||| || ||| ||||||||   ||  |||  |||||||| || |||  |  ||||||||||||||||||| |||||||||||||    
T  3382397 tgaggtattttaaaatacctccctgccgaattttttttactgaaaaatcagagatcgagcagagtcgagtgacatgtgtcagtggggccttaggtcaaaa 3382496  T
Q  285 attggggtatg 295  Q
    |||||||||||    
T  3382497 attggggtatg 3382507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 39534286 - 39534178
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt-accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaat 286  Q
    ||||||||||||||||||| || ||| |||||||| ||  |||  |||| ||||||||||  | || ||||| |||||||||||| ||| ||||||||||    
T  39534286 tgaggtattttaaaatacctccctgccgaattttttactgaaaaatcagggattgatcagagtcaaatgacacgtgtcagtgggatcttgggtcaaaaat 39534187  T
Q  287 tggggtatg 295  Q
    |||||||||    
T  39534186 tggggtatg 39534178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 39745440 - 39745483
Alignment:
Q  252 agtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  39745440 agtgacatgtgtcagtggggccttaggtcaaaaattggggtatg 39745483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 241 - 295
Target Start/End: Original strand, 22175846 - 22175900
Alignment:
Q  241 gatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||| | |||||||| ||||||||||| ||||||||||||||||||||||||    
T  22175846 gatcagggtcaagtgacacgtgtcagtggggccttaggtcaaaaattggggtatg 22175900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 55793251 - 55793291
Alignment:
Q  255 gacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  55793251 gacaagtgtcagtgggaccttaggtcaaaaattggggtatg 55793291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 254 - 295
Target Start/End: Complemental strand, 3439670 - 3439629
Alignment:
Q  254 tgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||| ||||||||||||||||||||||||||||| ||||    
T  3439670 tgacatgcgtcagtgggaccttaggtcaaaaattgggatatg 3439629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 12427175 - 12427139
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  12427175 tgtgtcagtgggaccttaggtcaaaatttggggtatg 12427139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 25984412 - 25984372
Alignment:
Q  255 gacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||| |||||||||||||||||||| |||||||||||||||    
T  25984412 gacacgtgtcagtgggaccttaggttaaaaattggggtatg 25984372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 41149018 - 41148982
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  41149018 tgtgtcagtgggaccttaggtcaaaatttggggtatg 41148982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 4619891 - 4619998
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    ||||||||||||||||||| |  ||| ||||||| ||  |||  |||||||||||||||| ||||   ||||||||  |||  | ||||||| |||||||    
T  4619891 tgaggtattttaaaatacctctctgccgaattttcactgaaaaatcagagattgatcagggttaaacaacatgtgtttgtgatatcttaggtaaaaaatt 4619990  T
Q  288 ggggtatg 295  Q
    ||||||||    
T  4619991 ggggtatg 4619998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 3836829 - 3836865
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  3836829 tgtgtcagtggaaccttaggtcaaaatttggggtatg 3836865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 13100709 - 13100673
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  13100709 tgtgtcagtggggccttaggtcaaaatttggggtatg 13100673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 18389085 - 18389121
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||| ||||||||||| ||||||||||    
T  18389085 tgtgtcagtgggactttaggtcaaaatttggggtatg 18389121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 20842697 - 20842733
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  20842697 tgtgtcagtgggaccttaggtaaaaatttggggtatg 20842733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 22703493 - 22703457
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  22703493 tgtgtcggtgggaccttaggtcaaaatttggggtatg 22703457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 22712464 - 22712428
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  22712464 tgtgtcggtgggaccttaggtcaaaatttggggtatg 22712428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 189 - 295
Target Start/End: Complemental strand, 22059820 - 22059714
Alignment:
Q  189 gaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattg 288  Q
    |||||||||||||||||| || ||| |||||||||| |||||||||||||||||||||| ||||| ||||  |||||||| |||||||||||||||||||    
T  22059820 gaggtattttaaaatacctccctgccgaatttttactaaaacgtcagagattgatcagggttaagcgacacatgtcagtgcgaccttaggtcaaaaattg 22059721  T
Q  289 gggtatg 295  Q
    |||||||    
T  22059720 gggtatg 22059714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 15666220 - 15666327
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    |||||||||||| |||||| | |||| |||||||||| |||||||||||||||||||||| ||||| |||| |||| |||||| ||||||||||||||||    
T  15666220 tgaggtattttacaatacctcattgccgaatttttactaaaacgtcagagattgatcagggttaagcgacacgtgttagtgggcccttaggtcaaaaatt 15666319  T
Q  288 ggggtatg 295  Q
    ||||||||    
T  15666320 ggggtatg 15666327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 18960951 - 18961059
Alignment:
Q  188 tgaggtattttaaaa-taccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaat 286  Q
    ||||||||||||||| |||| || | | |||||||||| ||||  |||||||| ||||||  | |||||||||||||||||||| |||||||||||||||    
T  18960951 tgaggtattttaaaagtacctcccttccgaatttttactaaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 18961050  T
Q  287 tggggtatg 295  Q
    |||||||||    
T  18961051 tggggtatg 18961059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 19713792 - 19713683
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || ||| ||||||||  ||  |||  |||||||| ||||||  |  ||||||||||||||||||| ||||||||||||||    
T  19713792 tgaggtattttaaaatacctccctgccgaatttttttactgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaa 19713693  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  19713692 ttggggtatg 19713683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 19719948 - 19719839
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || ||| ||||||||  || ||||  ||||||||  |||||  |  ||||||||||||||||||| ||||||||||||||    
T  19719948 tgaggtattttaaaatacctccctgccgaatttttttactaaaaaatcagagatcaatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaa 19719849  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  19719848 ttggggtatg 19719839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 12667490 - 12667600
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaa---tttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaa 284  Q
    ||||||||||||||||||| || ||| |||   |||| ||  |||  |||||||| ||||||  | |||||||||||||||||||| |||||||||||||    
T  12667490 tgaggtattttaaaatacctccctgccgaaaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaa 12667589  T
Q  285 attggggtatg 295  Q
    |||||||||||    
T  12667590 attggggtatg 12667600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 28702840 - 28702950
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaa---tttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaa 284  Q
    ||||||||||||||||||| || ||| |||   |||| ||  |||  |||||||| ||||||  | |||||||||||||||||||| |||||||||||||    
T  28702840 tgaggtattttaaaatacctccctgccgaaaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaa 28702939  T
Q  285 attggggtatg 295  Q
    |||||||||||    
T  28702940 attggggtatg 28702950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 22779095 - 22779202
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    ||||||||||||||||||| |  ||| ||||||| ||  |||  |||||||| ||||||  | |||||||| ||||||||||| | ||||||||||||||    
T  22779095 tgaggtattttaaaatacctctctgccgaattttcactgaaaaatcagagatcgatcagagtcaagtgacacgtgtcagtggggcattaggtcaaaaatt 22779194  T
Q  288 ggggtatg 295  Q
    ||||||||    
T  22779195 ggggtatg 22779202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 26896516 - 26896470
Alignment:
Q  249 ttaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  26896516 ttaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatg 26896470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 19169217 - 19169109
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt-accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaat 286  Q
    |||||||||| |||||||| |  ||| |||||||| ||  ||| | |||||| |||| ||| ||||  ||| ||||||||||||||||||||||||||||    
T  19169217 tgaggtatttcaaaatacctctctgccgaatttttcactgaaaagacagagactgattagggttaaacgacgtgtgtcagtgggaccttaggtcaaaaat 19169118  T
Q  287 tggggtatg 295  Q
    |||||||||    
T  19169117 tggggtatg 19169109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 290
Target Start/End: Complemental strand, 14177036 - 14176931
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt---accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaa 284  Q
    ||||||||||||||||||| || ||| ||||||||   ||  |||  |||||||| ||||||  |  ||||||||||||||||||| |||||||||||||    
T  14177036 tgaggtattttaaaatacctccctgccgaattttttttactgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaa 14176937  T
Q  285 attggg 290  Q
    ||||||    
T  14176936 attggg 14176931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 20452657 - 20452720
Alignment:
Q  232 tcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||| ||||||  | |||||||||||||||||||  ||||||||||||||||||||||||    
T  20452657 tcagagatcgatcagagtcaagtgacatgtgtcagtggagccttaggtcaaaaattggggtatg 20452720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 20058842 - 20058900
Alignment:
Q  237 gattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||| ||||  |||| | ||||||||||||||||||||||||||||||||||    
T  20058842 gattgatcagggttaaacgacacgggtcagtgggaccttaggtcaaaaattggggtatg 20058900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 20459477 - 20459521
Alignment:
Q  251 aagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||    
T  20459477 aagtgacatgtgtcactggggccttaggtcaaaaattggggtatg 20459521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 22631761 - 22631697
Alignment:
Q  231 gtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||| || |||||||| | || ||||||| ||||||| ||||||||||||||||||||||||||    
T  22631761 gtcagggactgatcagggtcaaatgacatgcgtcagtgtgaccttaggtcaaaaattggggtatg 22631697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 24143592 - 24143628
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||||||||||||||    
T  24143592 tgtgtcagtgggaccttaggtcaaaaattggggtatg 24143628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 24150082 - 24150118
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||||||||||||||    
T  24150082 tgtgtcagtgggaccttaggtcaaaaattggggtatg 24150118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 232 - 294
Target Start/End: Original strand, 10985074 - 10985136
Alignment:
Q  232 tcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtat 294  Q
    |||||||| ||||||  | ||||||||||||| ||||||  ||||||||||||||||||||||    
T  10985074 tcagagatggatcagagtcaagtgacatgtgttagtggggtcttaggtcaaaaattggggtat 10985136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 295
Target Start/End: Original strand, 17784028 - 17784133
Alignment:
Q  192 gtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattgg 289  Q
    ||||||||||||||| || ||| ||||||||  ||  |||  |||||||| ||||||  |  ||||||||||||||||||  ||||||||||||||||||    
T  17784028 gtattttaaaatacctccctgccgaatttttttactgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggagccttaggtcaaaaattgg 17784127  T
Q  290 ggtatg 295  Q
     |||||    
T  17784128 tgtatg 17784133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 19899062 - 19898953
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || ||| ||||||||  ||  |||  ||||||||  |||||  |  ||||||||||| ||||||| ||||||||||||||    
T  19899062 tgaggtattttaaaatacctccctgccgaatttttttactgaaaaatcagagatcaatcagagtcgagtgacatgtgccagtggggccttaggtcaaaaa 19898963  T
Q  286 ttggggtatg 295  Q
    || |||||||    
T  19898962 tttgggtatg 19898953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 20050979 - 20051037
Alignment:
Q  237 gattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||| ||||  |||| | |||||||||| |||||||||||||||||||||||    
T  20050979 gattgatcagggttaaacgacacgggtcagtgggaacttaggtcaaaaattggggtatg 20051037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 1549246 - 1549206
Alignment:
Q  255 gacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||| |||| |||||||||||||||||||||||||||||||    
T  1549246 gacacgtgttagtgggaccttaggtcaaaaattggggtatg 1549206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 8275543 - 8275507
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  8275543 tgtgtcagtgggaccttaggtcaaaatttggggtatg 8275507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 16816883 - 16816919
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  16816883 tgtgtcagtgggaccttaggtcaaaatttggggtatg 16816919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 16825638 - 16825674
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  16825638 tgtgtcagtgggaccttaggtcaaaatttggggtatg 16825674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 18965559 - 18965595
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  18965559 tgtgtcagtgggaccttaggtcaaaatttggggtatg 18965595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 260 - 295
Target Start/End: Complemental strand, 27509411 - 27509376
Alignment:
Q  260 gtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||||||||||||||| ||||||||||    
T  27509411 gtgtcagtgggaccttaggtcaaaatttggggtatg 27509376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 260 - 295
Target Start/End: Complemental strand, 27517348 - 27517313
Alignment:
Q  260 gtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||||||||||||||| ||||||||||    
T  27517348 gtgtcagtgggaccttaggtcaaaatttggggtatg 27517313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 295
Target Start/End: Original strand, 615927 - 615981
Alignment:
Q  241 gatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||| | |||||||| |||||||||||| ||| |||||||| ||||||||||    
T  615927 gatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatg 615981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 295
Target Start/End: Original strand, 623828 - 623882
Alignment:
Q  241 gatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||| | |||||||| |||||||||||| ||| |||||||| ||||||||||    
T  623828 gatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatg 623882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 295
Target Start/End: Complemental strand, 21961651 - 21961610
Alignment:
Q  254 tgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||| || ||||| |||||||||||||||||||||||||    
T  21961651 tgacatgcgttagtggaaccttaggtcaaaaattggggtatg 21961610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 12391100 - 12391060
Alignment:
Q  255 gacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||| ||||| | |||||||||||||||||||||||    
T  12391100 gacatgtgttagtggtatcttaggtcaaaaattggggtatg 12391060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 295
Target Start/End: Complemental strand, 16496443 - 16496415
Alignment:
Q  267 tgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||||||    
T  16496443 tgggaccttaggtcaaaaattggggtatg 16496415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 30437383 - 30437419
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  30437383 tgtgtcggtgggaccttaggtcaaaatttggggtatg 30437419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 189 - 295
Target Start/End: Complemental strand, 44370376 - 44370270
Alignment:
Q  189 gaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattg 288  Q
    |||||||||||||||||| || ||| |||||||||| |||||||||||||||||||||| ||||| ||||  |||||||| |||||||||||||||||||    
T  44370376 gaggtattttaaaatacctccctgccgaatttttactaaaacgtcagagattgatcagggttaagcgacacatgtcagtgcgaccttaggtcaaaaattg 44370277  T
Q  289 gggtatg 295  Q
    |||||||    
T  44370276 gggtatg 44370270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 20279287 - 20279394
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    ||||||||||||||||||| |  ||| ||| ||| ||  |||  |||||||| ||||||  | |||||||||||||||||||| ||||||||||||||||    
T  20279287 tgaggtattttaaaatacctctctgccgaaatttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 20279386  T
Q  288 ggggtatg 295  Q
    ||||||||    
T  20279387 ggggtatg 20279394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 18242 - 18351
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || ||| ||||||||  ||  |||  |||||||| ||||||  | ||||||||||| |||||||| ||||||||||||||    
T  18242 tgaggtattttaaaatacctccctgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtctcagtggggccttaggtcaaaaa 18341  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  18342 ttggggtatg 18351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 5871064 - 5871173
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || ||||||||||||  ||  |||  |||||||| ||||||  |  ||||| ||||||||||||| ||||||||||||||    
T  5871064 tgaggtattttaaaatacctccctgctgaatttttttactgaaaaatcagagatcgatcagagtcgagtgatatgtgtcagtgggcccttaggtcaaaaa 5871163  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  5871164 ttggggtatg 5871173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 5874205 - 5874314
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || ||||||||||||  ||  |||  |||||||| ||||||  |  ||||||||||||||||||  ||||||||||||||    
T  5874205 tgaggtattttaaaatacctccctgctgaatttttttactgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggacccttaggtcaaaaa 5874304  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  5874305 ttggggtatg 5874314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 18500338 - 18500229
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || ||| ||||||||  ||  |||  |||||||| ||||||  | |||||||||||||||||||| |||||| |||||||    
T  18500338 tgaggtattttaaaatacctccctgccgaatttttttactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttagatcaaaaa 18500239  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  18500238 ttggggtatg 18500229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 36735445 - 36735336
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || ||| ||||||||  ||  |||  |||||||| ||||||  |  ||||||||||||||||||| ||||||||||||||    
T  36735445 tgaggtattttaaaatacctccctgccgaatttttttactgaaaaatcagagatggatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaa 36735346  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  36735345 ttggggtatg 36735336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 236 - 295
Target Start/End: Original strand, 22518966 - 22519025
Alignment:
Q  236 agattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||| ||||  |||| ||||||||||||||||||||||||||||||||||||    
T  22518966 agattgatcagggttaaacgacacgtgtcagtgggaccttaggtcaaaaattggggtatg 22519025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 11873748 - 11873685
Alignment:
Q  232 tcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||| ||||||  | ||||||||||||||||||||  |||||||||||||||||||||||    
T  11873748 tcagagatcgatcagagtcaagtgacatgtgtcagtggggtcttaggtcaaaaattggggtatg 11873685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 38084487 - 38084530
Alignment:
Q  252 agtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  38084487 agtgacatgtgtcagtggggccttaggtcaaaaattggggtatg 38084530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 45498930 - 45499037
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    ||||||||||||||||| |  | ||| ||||||| ||  |||||| ||||| |||||||| ||||  ||| ||||||||||||  |||||||||||||||    
T  45498930 tgaggtattttaaaatatcttcctgccgaattttcactgaaacgttagagactgatcagggttaaacgacgtgtgtcagtggggtcttaggtcaaaaatt 45499029  T
Q  288 ggggtatg 295  Q
    || |||||    
T  45499030 ggagtatg 45499037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 12370408 - 12370516
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt-accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaat 286  Q
    |||||||||||||||||||   |||| |||||||| ||  |||  |||| ||||||||||  | || ||||| |||||||||||| ||| ||||||||||    
T  12370408 tgaggtattttaaaatacctttttgccgaattttttactgaaaaatcagggattgatcagagtcaaatgacacgtgtcagtgggatcttgggtcaaaaat 12370507  T
Q  287 tggggtatg 295  Q
    |||||||||    
T  12370508 tggggtatg 12370516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 21064753 - 21064689
Alignment:
Q  231 gtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||| || |||||||| | || ||||||| |||||||||||||||||| |||||||||||||||    
T  21064753 gtcagggactgatcagggtcaaatgacatgcgtcagtgggaccttaggtaaaaaattggggtatg 21064689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 190 - 295
Target Start/End: Original strand, 27343915 - 27344020
Alignment:
Q  190 aggtattttaaaataccaccttgctgaattttt-accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattg 288  Q
    ||||||||||||||||| ||| || |||||||| ||  |||  || ||||||||||||| ||||  |||| |||||||| ||||||||||| |||||||     
T  27343915 aggtattttaaaatacctcct-gccgaatttttcactgaaaaatccgagattgatcagggttaaacgacacgtgtcagtaggaccttaggtaaaaaattt 27344013  T
Q  289 gggtatg 295  Q
    |||||||    
T  27344014 gggtatg 27344020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 254 - 295
Target Start/End: Original strand, 25036877 - 25036918
Alignment:
Q  254 tgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  25036877 tgacatgtgtcggtgtgaccttaggtcaaaaattggggtatg 25036918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 254 - 295
Target Start/End: Original strand, 25040984 - 25041025
Alignment:
Q  254 tgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||| ||| ||||||||||||||||||||||||||    
T  25040984 tgacatgtgtcggtgtgaccttaggtcaaaaattggggtatg 25041025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 39649705 - 39649669
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  39649705 tgtgtcagtgggaccttaggtcaaaatttggggtatg 39649669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 44299998 - 44299962
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  44299998 tgtgtcagtgggaccttaggtcaaaatttggggtatg 44299962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 45489341 - 45489392
Alignment:
Q  244 caggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||| |||| |||| |||||| ||| ||||||||||||||||||||||||||    
T  45489341 cagggttaaatgacgtgtgtcggtgtgaccttaggtcaaaaattggggtatg 45489392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 12374593 - 12374557
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  12374593 tgtgtcagtggaaccttaggtcaaaatttggggtatg 12374557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 12388420 - 12388384
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  12388420 tgtgtcagtggaaccttaggtcaaaatttggggtatg 12388384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 22934261 - 22934225
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  22934261 tgtgtcagtgggacctttggtcaaaatttggggtatg 22934225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 22940224 - 22940188
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  22940224 tgtgtcagtgggacctttggtcaaaatttggggtatg 22940188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 22954119 - 22954083
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  22954119 tgtgtcagtgggacctttggtcaaaatttggggtatg 22954083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 15610444 - 15610551
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    |||||||||||| |||||| || ||| |||||||||| |||||||||||||||||| ||| ||||| |||| | ||||||||||||||||||||||||||    
T  15610444 tgaggtattttataatacctccctgccgaatttttactaaaacgtcagagattgattagggttaagcgacacgcgtcagtgggaccttaggtcaaaaatt 15610543  T
Q  288 ggggtatg 295  Q
    ||||||||    
T  15610544 ggggtatg 15610551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 15579394 - 15579501
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    ||||||||||||||||||| || | | |||||||||| |||||||||||||||||| ||| ||||| |||| | |||||||||||||||||||||||| |    
T  15579394 tgaggtattttaaaatacctccctaccgaatttttactaaaacgtcagagattgattagggttaagcgacacgcgtcagtgggaccttaggtcaaaaact 15579493  T
Q  288 ggggtatg 295  Q
    ||||||||    
T  15579494 ggggtatg 15579501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 14893101 - 14893208
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    ||||||||||||||||||| || ||| ||||||||||  |||  |||||||| ||||||  | |||||||||||||||||||| ||||||||||||||||    
T  14893101 tgaggtattttaaaatacctccatgccgaatttttactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 14893200  T
Q  288 ggggtatg 295  Q
    ||||||||    
T  14893201 ggggtatg 14893208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 14887996 - 14888103
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    |||| |||||||||||||| |  ||||||||||||||  |||  |||||||| ||||||  | |||||||||||||||||||  ||||||||||||||||    
T  14887996 tgagatattttaaaatacctctctgctgaatttttactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggagccttaggtcaaaaatt 14888095  T
Q  288 ggggtatg 295  Q
    ||||||||    
T  14888096 ggggtatg 14888103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 43097671 - 43097564
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    ||||||||||||||||||| || |||  |||||||||  ||| || |||||||||||| | ||||  |||| ||||||||||||||||| ||||||||||    
T  43097671 tgaggtattttaaaatacctccctgcctaatttttactgaaaagttagagattgatcatggttaaacgacacgtgtcagtgggaccttaagtcaaaaatt 43097572  T
Q  288 ggggtatg 295  Q
    ||||||||    
T  43097571 ggggtatg 43097564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 13111740 - 13111849
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || ||| ||||||||  ||  |||  |||||||| ||||||  | |||||||||||||||||||| ||||||||||||||    
T  13111740 tgaggtattttaaaatacctccctgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaa 13111839  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  13111840 ttggggtatg 13111849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 23288076 - 23288184
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt-accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaat 286  Q
    ||||||||||||||||||| || ||| |||||||| ||  |||  |||||||| ||||||  | ||||||||||||| |||||| |||||||||||||||    
T  23288076 tgaggtattttaaaatacctccctgccgaatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtaagtggggccttaggtcaaaaat 23288175  T
Q  287 tggggtatg 295  Q
    |||||||||    
T  23288176 tggggtatg 23288184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 14881270 - 14881377
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    ||||||||||||||||||| || ||| |||| ||||   |||  |||||||| ||||||  | |||||||||||||| ||||| ||||||||||||||||    
T  14881270 tgaggtattttaaaatacctccatgccgaatatttattgaaaaatcagagatcgatcagagtcaagtgacatgtgtcggtggggccttaggtcaaaaatt 14881369  T
Q  288 ggggtatg 295  Q
    ||||||||    
T  14881370 ggggtatg 14881377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 13105592 - 13105701
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || ||| ||||||||  ||  |||  |||||||| ||||||  | |||||||||||||||||||| ||||||||||||||    
T  13105592 tgaggtattttaaaatacctccctgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaa 13105691  T
Q  286 ttggggtatg 295  Q
    || |||||||    
T  13105692 ttagggtatg 13105701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 16031258 - 16031321
Alignment:
Q  232 tcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||| ||||||  | |||||||||||||||||||| ||||||||||||||||||||||||    
T  16031258 tcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatg 16031321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 21638560 - 21638623
Alignment:
Q  232 tcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||| ||||||  | |||||||||||||||||||| ||||||||||||||||||||||||    
T  21638560 tcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatg 21638623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 4313548 - 4313657
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || ||  ||||||||  ||  |||  | |||||| ||||||  | |||||||||||||||||||| ||||||||||||||    
T  4313548 tgaggtattttaaaatacctccctgtcgaattttttcactgaaaaattagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaa 4313647  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  4313648 ttggggtatg 4313657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 261411 - 261367
Alignment:
Q  251 aagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  261411 aagtgacatgtgtcagtggggccttaggtcaaaaattggggtatg 261367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 12550522 - 12550414
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt-accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaat 286  Q
    ||||||||||||||||||| || ||| |||||||| ||  |||  |||||||| |||| |  |  |||||||||||||| |||| |||||||||||||||    
T  12550522 tgaggtattttaaaatacctccctgccgaattttttactgaaaaatcagagatcgatcggagtcgagtgacatgtgtcactggggccttaggtcaaaaat 12550423  T
Q  287 tggggtatg 295  Q
    |||||||||    
T  12550422 tggggtatg 12550414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 13086621 - 13086557
Alignment:
Q  231 gtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||| || |||||||| | || |||||||||| |||||||||||||||||||||||||||||||    
T  13086621 gtcagggactgatcagggtcaaatgacatgtgttagtgggaccttaggtcaaaaattggggtatg 13086557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 18706332 - 18706270
Alignment:
Q  232 tcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||| ||||||||||| ||||  |||| ||||||||||||||||||||||||||||||||||||    
T  18706332 tcagggattgatcagg-ttaaacgacacgtgtcagtgggaccttaggtcaaaaattggggtatg 18706270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 30102407 - 30102514
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    ||||||||||||||||||| |  ||| ||||||||||   ||  |||||||| ||||||  | ||||||||||| |||||||| ||||| ||||||||||    
T  30102407 tgaggtattttaaaatacctctctgccgaatttttactggaaaatcagagatcgatcagagtcaagtgacatgtatcagtggggccttaagtcaaaaatt 30102506  T
Q  288 ggggtatg 295  Q
    ||| ||||    
T  30102507 gggatatg 30102514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 295
Target Start/End: Complemental strand, 68252 - 68148
Alignment:
Q  192 gtattttaaaataccaccttgctgaattttt-accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggg 290  Q
    ||||||||||||||| || |||||||||||| ||  ||   ||| |||| ||||||  | |||||||||||| ||||||| | |||||||||||||||||    
T  68252 gtattttaaaatacctccctgctgaattttttactgaataatcaaagatcgatcagagtcaagtgacatgtgccagtggggcgttaggtcaaaaattggg 68153  T
Q  291 gtatg 295  Q
    |||||    
T  68152 gtatg 68148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 192 - 295
Target Start/End: Complemental strand, 74345 - 74241
Alignment:
Q  192 gtattttaaaataccaccttgctgaattttt-accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggg 290  Q
    ||||||||||||||| || |||||||||||| ||  ||   ||| |||| ||||||  | |||||||||||| ||||||| | |||||||||||||||||    
T  74345 gtattttaaaatacctccctgctgaattttttactgaataatcaaagatcgatcagagtcaagtgacatgtgccagtggggcgttaggtcaaaaattggg 74246  T
Q  291 gtatg 295  Q
    |||||    
T  74245 gtatg 74241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 8612733 - 8612625
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaat-ttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaat 286  Q
    ||||||||||||||||||| || |||  ||| ||||||  |||  |||||||| ||||||  |  |||||||||| ||||||||  ||||||||||||||    
T  8612733 tgaggtattttaaaatacctccctgccaaatcttttactgaaaaatcagagatcgatcagagtcgagtgacatgtctcagtgggctcttaggtcaaaaat 8612634  T
Q  287 tggggtatg 295  Q
    |||||||||    
T  8612633 tggggtatg 8612625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 14252511 - 14252403
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt-accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaat 286  Q
    ||||||||||||||||||| |  ||| |||||||| ||  |||  |||||||||||| ||| ||||   || ||||||| ||||||||||||||||||||    
T  14252511 tgaggtattttaaaatacctctctgccgaatttttcactgaaaaatcagagattgattagggttaaacaacgtgtgtcaatgggaccttaggtcaaaaat 14252412  T
Q  287 tggggtatg 295  Q
    | |||||||    
T  14252411 tagggtatg 14252403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 48060748 - 48060792
Alignment:
Q  251 aagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||| | ||||||||||||||||||||||||    
T  48060748 aagtgacatgtgtcagtgaggccttaggtcaaaaattggggtatg 48060792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 295
Target Start/End: Complemental strand, 11180806 - 11180763
Alignment:
Q  252 agtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||||||||| |||||||| |||||||||||||||    
T  11180806 agtgacatgtgtcagtggggccttaggttaaaaattggggtatg 11180763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 295
Target Start/End: Complemental strand, 37470196 - 37470142
Alignment:
Q  241 gatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||| | |||||||| |||| |||||| ||||||||||||||||||||||||    
T  37470196 gatcagggtcaagtgacacgtgttagtggggccttaggtcaaaaattggggtatg 37470142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 295
Target Start/End: Complemental strand, 49967411 - 49967357
Alignment:
Q  241 gatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||| | |||||||| ||||||||||| |||||||||||||||| |||||||    
T  49967411 gatcagggtcaagtgacacgtgtcagtggggccttaggtcaaaaattagggtatg 49967357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 254 - 295
Target Start/End: Complemental strand, 3404796 - 3404755
Alignment:
Q  254 tgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||||||| |||||||| |||||||||||||||    
T  3404796 tgacatgtgtcagtggggccttaggtaaaaaattggggtatg 3404755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 46393320 - 46393426
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttacca-aaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaat 286  Q
    ||||||||||||||||||| || ||| ||||||||  |  ||||||  |||| |||||||| |||| || |  |||||||||||| ||| ||||||||||    
T  46393320 tgaggtattttaaaatacctccctgccgaatttttcgctgaaacgt--gagactgatcagggttaaatggcgcgtgtcagtgggatcttgggtcaaaaat 46393417  T
Q  287 tggggtatg 295  Q
    |||||||||    
T  46393418 tggggtatg 46393426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 46401068 - 46401174
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttacca-aaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaat 286  Q
    ||||||||||||||||||| || ||| ||||||||  |  ||||||  |||| |||||||| |||| || |  |||||||||||| ||| ||||||||||    
T  46401068 tgaggtattttaaaatacctccctgccgaatttttcgctgaaacgt--gagactgatcagggttaaatggcgcgtgtcagtgggatcttgggtcaaaaat 46401165  T
Q  287 tggggtatg 295  Q
    |||||||||    
T  46401166 tggggtatg 46401174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 5651850 - 5651886
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  5651850 tgtgtcagtgggaccttaggtcaaaatttggggtatg 5651886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 8606273 - 8606165
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt-accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaat 286  Q
    ||||||||||||||||||| || |||  ||||||| ||  |||  |||||||| ||| ||  |  |||||||||| ||||||||  ||||||||||||||    
T  8606273 tgaggtattttaaaatacctccctgccaaattttttactgaaaaatcagagatcgattagagtcgagtgacatgtttcagtgggctcttaggtcaaaaat 8606174  T
Q  287 tggggtatg 295  Q
    |||||||||    
T  8606173 tggggtatg 8606165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 8804242 - 8804206
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  8804242 tgtgtcagtgggaccttaggtcaaaatttggggtatg 8804206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 8812642 - 8812606
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  8812642 tgtgtcagtgggaccttaggtcaaaatttggggtatg 8812606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 11630009 - 11630045
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  11630009 tgtgtcagtgggaccttaggtcaaaatttggggtatg 11630045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 15529068 - 15529104
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  15529068 tgtgtcagtgggaccttaggtcaaaatttggggtatg 15529104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 15537758 - 15537794
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  15537758 tgtgtcagtgggaccttaggtcaaaatttggggtatg 15537794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 20603944 - 20604052
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt-accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaat 286  Q
    ||||||||||||||||||| || ||| |||||||| ||  ||||||   ||   ||||||| | |||||||| |||||||||||| ||| |||||||| |    
T  20603944 tgaggtattttaaaatacctccctgccgaatttttcactgaaacgtttaagtccgatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaatt 20604043  T
Q  287 tggggtatg 295  Q
    |||||||||    
T  20604044 tggggtatg 20604052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 21607491 - 21607455
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  21607491 tgtgtcagtgggaccttaggtcaaaatttggggtatg 21607455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 295
Target Start/End: Original strand, 33814598 - 33814630
Alignment:
Q  263 tcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||||||||||    
T  33814598 tcagtgggaccttaggtcaaaaattggggtatg 33814630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 46371211 - 46371175
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  46371211 tgtgtcagtgggaccttaggtcaaaatttggggtatg 46371175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 46385338 - 46385302
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  46385338 tgtgtcagtgggaccttaggtcaaaatttggggtatg 46385302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 259 - 294
Target Start/End: Complemental strand, 21616119 - 21616084
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtat 294  Q
    |||||||||||||||||||||||||| |||||||||    
T  21616119 tgtgtcagtgggaccttaggtcaaaatttggggtat 21616084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 295
Target Start/End: Original strand, 37256103 - 37256157
Alignment:
Q  241 gatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||| | |||||||| |||||||||||| ||| |||||||| ||||||||||    
T  37256103 gatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatg 37256157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 295
Target Start/End: Original strand, 37265939 - 37265993
Alignment:
Q  241 gatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||| | |||||||| |||||||||||| ||| |||||||| ||||||||||    
T  37265939 gatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatg 37265993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 6194023 - 6193987
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  6194023 tgtgtcagtgtgaccttaggtcaaaatttggggtatg 6193987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 6201606 - 6201570
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  6201606 tgtgtcagtgtgaccttaggtcaaaatttggggtatg 6201570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 295
Target Start/End: Original strand, 11325852 - 11325880
Alignment:
Q  267 tgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||||||    
T  11325852 tgggaccttaggtcaaaaattggggtatg 11325880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 195 - 295
Target Start/End: Complemental strand, 43906202 - 43906102
Alignment:
Q  195 ttttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtat 294  Q
    |||||||||||| |||||| ||||||||||  |||  |||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  43906202 ttttaaaatacctccttgccgaatttttactgaaaaatcagagatcgatcaggatcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtat 43906103  T
Q  295 g 295  Q
    |    
T  43906102 g 43906102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 34132775 - 34132884
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || | ||||||||||  ||  |||  |||||||| ||||||  | |||||||||||||||||||| ||||||||||||||    
T  34132775 tgaggtattttaaaatacctcccttctgaatttttttactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaa 34132874  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  34132875 ttggggtatg 34132884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 22346978 - 22346870
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt-accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaat 286  Q
    ||||||||||||||||||| || ||| |||||||| ||  |||  |||||||| ||||||  | |||||||||||||||||||| ||||||| |||||||    
T  22346978 tgaggtattttaaaatacctccctgccgaattttttactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggacaaaaat 22346879  T
Q  287 tggggtatg 295  Q
    |||||||||    
T  22346878 tggggtatg 22346870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 1858520 - 1858629
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || ||| ||||||||  ||  |||  ||||||||||||||   |  ||||||||||||||||||| ||||||||||||||    
T  1858520 tgaggtattttaaaatacctccctgccgaatttttttactgaaaaatcagagattgatcatagtcgagtgacatgtgtcagtggggccttaggtcaaaaa 1858619  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  1858620 ttggggtatg 1858629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 289
Target Start/End: Original strand, 13270840 - 13270943
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || ||| ||||||||  ||  |||  |||||||| ||||||  |  ||||||||||||||||||| ||||||||||||||    
T  13270840 tgaggtattttaaaatacctccctgccgaatttttttactgaaaaatcagagatcgatcagactcgagtgacatgtgtcagtggggccttaggtcaaaaa 13270939  T
Q  286 ttgg 289  Q
    ||||    
T  13270940 ttgg 13270943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 34139087 - 34139196
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || | | ||||||||  ||  |||  |||||||| ||||||  | |||||||||||||||||||  |||||| |||||||    
T  34139087 tgaggtattttaaaatacctcccttccgaatttttttactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggagccttagatcaaaaa 34139186  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  34139187 ttggggtatg 34139196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 15683261 - 15683155
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt-accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaat 286  Q
    ||||||||||||||||||  | |||  |||||||| || |||| ||  |||| |||||||| ||||  |||  |||||||||||||||||||||||||||    
T  15683261 tgaggtattttaaaatacttctttgtcgaatttttcactaaaatgt--gagactgatcagggttaaacgacgcgtgtcagtgggaccttaggtcaaaaat 15683164  T
Q  287 tggggtatg 295  Q
    |||||||||    
T  15683163 tggggtatg 15683155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 42631285 - 42631321
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||||||||||||||    
T  42631285 tgtgtcagtgggaccttaggtcaaaaattggggtatg 42631321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 18779084 - 18779127
Alignment:
Q  252 agtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||    
T  18779084 agtgacatgtgtcagcggggccttaggtcaaaaattggggtatg 18779127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 295
Target Start/End: Original strand, 6852037 - 6852075
Alignment:
Q  257 catgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  6852037 catgtgtcagtgggaccttaggttaaaaattggggtatg 6852075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 28415262 - 28415153
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || |||  |||||||  ||  |||  |||||||| ||||||  |  ||||||||||||||| ||| |||||||| |||||    
T  28415262 tgaggtattttaaaatacctccctgccaaatttttttactgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagcggggccttaggtaaaaaa 28415163  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  28415162 ttggggtatg 28415153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 4847209 - 4847173
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  4847209 tgtgtcagtgggaccttaggtcaaaatttggggtatg 4847173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 6113681 - 6113645
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  6113681 tgtgtcagtgggaccttaggtcaaaatttggggtatg 6113645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 15767129 - 15767169
Alignment:
Q  255 gacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||| |||| |||||||||||||||||||||||||||||||    
T  15767129 gacacgtgttagtgggaccttaggtcaaaaattggggtatg 15767169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 260 - 295
Target Start/End: Complemental strand, 36898463 - 36898428
Alignment:
Q  260 gtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||||||| ||||||||||||||||||    
T  36898463 gtgtcagtgggaccttaagtcaaaaattggggtatg 36898428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 295
Target Start/End: Original strand, 23878703 - 23878757
Alignment:
Q  241 gatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||| | |||||||| |||||||||||| ||| |||||||| ||||||||||    
T  23878703 gatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatg 23878757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 5651553 - 5651589
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  5651553 tgtgtcagtgggatcttaggtcaaaatttggggtatg 5651589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 16388561 - 16388597
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  16388561 tgtgttagtgggaccttaggtcaaaatttggggtatg 16388597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 16402672 - 16402708
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  16402672 tgtgttagtgggaccttaggtcaaaatttggggtatg 16402708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 295
Target Start/End: Original strand, 17016388 - 17016416
Alignment:
Q  267 tgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||||||    
T  17016388 tgggaccttaggtcaaaaattggggtatg 17016416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 30365040 - 30365076
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  30365040 tgtgtcagtgggatcttaggtcaaaatttggggtatg 30365076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 30379104 - 30379140
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  30379104 tgtgtcagtgggatcttaggtcaaaatttggggtatg 30379140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 3876 - 3769
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    |||||||||||| |||||| | |||| |||||||||| |||||||||||||||||||||| ||||| ||||  ||| |||||| ||||||||||||||||    
T  3876 tgaggtattttacaatacctcattgccgaatttttactaaaacgtcagagattgatcagggttaagcgacacatgttagtgggcccttaggtcaaaaatt 3777  T
Q  288 ggggtatg 295  Q
    ||||||||    
T  3776 ggggtatg 3769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 8090 - 7983
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    ||||||||||||||||||| || ||| ||||||||||  |||  |||||||| ||||||  | |||||||||||||||||||| ||||||||||||||||    
T  8090 tgaggtattttaaaatacctccctgccgaatttttactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 7991  T
Q  288 ggggtatg 295  Q
    ||||||||    
T  7990 ggggtatg 7983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 14891817 - 14891924
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    ||||||||||||||||||| || ||| ||||||||||  |||  |||||||| ||||||  | |||||||||||||||||||| ||||||||||||||||    
T  14891817 tgaggtattttaaaatacctccctgccgaatttttactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 14891916  T
Q  288 ggggtatg 295  Q
    ||||||||    
T  14891917 ggggtatg 14891924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 22162940 - 22163049
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || ||| ||||||||  ||  |||  |||||||| ||||||  | |||||||||||||||||||| ||||||||||||||    
T  22162940 tgaggtattttaaaatacctccatgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtgggcccttaggtcaaaaa 22163039  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  22163040 ttggggtatg 22163049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 15061289 - 15061398
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttacc--aaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || ||| ||||||||     ||||  |||||||| ||||||  |||||||||| ||||||||||| ||||||||||||||    
T  15061289 tgaggtattttaaaatacctccctgccgaatttttcattgaaaaaatcagagatcgatcagagttaagtgacacgtgtcagtggggccttaggtcaaaaa 15061388  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  15061389 ttggggtatg 15061398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 32025607 - 32025716
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || ||| ||||||||  ||  |||  |||||||| |||||| ||  |||||||||||||||||||  |||||||||||||    
T  32025607 tgaggtattttaaaatacctccctgccgaatttttttactgaaaaatcagagatcgatcagaatcgagtgacatgtgtcagtggggtcttaggtcaaaaa 32025706  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  32025707 ttggggtatg 32025716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 20733270 - 20733163
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    ||||||||||||||||||| |  ||| ||||||| ||  |||  |||||||| ||||||  | |||||||| |||||| |||| ||||||||||||||||    
T  20733270 tgaggtattttaaaatacctctctgccgaattttcactgaaaaatcagagatcgatcagagtcaagtgacacgtgtcaatggggccttaggtcaaaaatt 20733171  T
Q  288 ggggtatg 295  Q
    ||||||||    
T  20733170 ggggtatg 20733163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 22156977 - 22157040
Alignment:
Q  232 tcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||| ||||||  | ||||||||||||| |||||| ||||||||||||||||||||||||    
T  22156977 tcagagatcgatcagagtcaagtgacatgtgttagtgggcccttaggtcaaaaattggggtatg 22157040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 6030906 - 6030853
Alignment:
Q  240 tgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggta 293  Q
    |||||||| | || ||||||| ||||||||||||||||||||||||||||||||    
T  6030906 tgatcagggtcaaatgacatgcgtcagtgggaccttaggtcaaaaattggggta 6030853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 254 - 295
Target Start/End: Original strand, 24487937 - 24487978
Alignment:
Q  254 tgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  24487937 tgacatgcgtcagtgggaccttaggtcaaaaattggggtatg 24487978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 20725308 - 20725201
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    ||||||||||||||||||| |  ||||||||||| ||  |||  |||||||| ||||||  | |||||||| |||| ||| || |||||||| |||||||    
T  20725308 tgaggtattttaaaatacctctctgctgaattttcactgaaaaatcagagatcgatcagagtcaagtgacacgtgttagtcgggccttaggtaaaaaatt 20725209  T
Q  288 ggggtatg 295  Q
     |||||||    
T  20725208 tgggtatg 20725201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 20738206 - 20738099
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    ||||||||||||||||||| |  ||||||||||| ||  |||  |||||||| ||||||  | |||||||| |||| ||| || |||||||| |||||||    
T  20738206 tgaggtattttaaaatacctctctgctgaattttcactgaaaaatcagagatcgatcagagtcaagtgacacgtgttagtcgggccttaggtaaaaaatt 20738107  T
Q  288 ggggtatg 295  Q
     |||||||    
T  20738106 tgggtatg 20738099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 25859294 - 25859337
Alignment:
Q  252 agtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  25859294 agtgacatgtgacagtggggccttaggtcaaaaattggggtatg 25859337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 15707177 - 15707141
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  15707177 tgtgtcagtgggaccttaggtcaaaatttggggtatg 15707141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 18433069 - 18433033
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  18433069 tgtgtcagtgggaccttaggtcaaaatttggggtatg 18433033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 23267953 - 23267989
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  23267953 tgtgtcagtgggaccttaggtcaaaatttggggtatg 23267989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 295
Target Start/End: Original strand, 12307680 - 12307734
Alignment:
Q  241 gatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||| | |||||||| |||||||||||| ||| |||||||| ||||||||||    
T  12307680 gatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatg 12307734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 25642998 - 25642952
Alignment:
Q  249 ttaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||| |||||||||||||||  | |||||||||||||||||||||||    
T  25642998 ttaaatgacatgtgtcagtgctatcttaggtcaaaaattggggtatg 25642952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 295
Target Start/End: Original strand, 23816699 - 23816740
Alignment:
Q  254 tgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||| |||||| ||| ||||||||||||||||||||||||||    
T  23816699 tgacgtgtgtcggtgtgaccttaggtcaaaaattggggtatg 23816740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 39631550 - 39631586
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  39631550 tgtgtcagtgagaccttaggtcaaaatttggggtatg 39631586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 39641098 - 39641134
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  39641098 tgtgtcagtgagaccttaggtcaaaatttggggtatg 39641134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 2862 - 2969
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    |||||||||||||||||||  | ||| |||||||||| |||||||||||||||||||||| ||||| ||||  |||||||| ||||||| |||| |||||    
T  2862 tgaggtattttaaaataccctcctgccgaatttttactaaaacgtcagagattgatcagggttaagcgacacatgtcagtgagaccttatgtcagaaatt 2961  T
Q  288 ggggtatg 295  Q
     |||||||    
T  2962 agggtatg 2969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 22840102 - 22840211
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagatt--gatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    |||||||||||||||||||  ||||| ||||||||||  |||||||||||| |  ||||||| ||||  |||  ||||||||||||||||||||||||||    
T  22840102 tgaggtattttaaaataccttcttgccgaatttttactgaaacgtcagagactctgatcagggttaaacgacgcgtgtcagtgggaccttaggtcaaaaa 22840201  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  22840202 ttggggtatg 22840211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 35070147 - 35070038
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| | |||| ||||||||  ||  |||  |||||||| ||||||  | |||||||||||||||||||| ||||||||||||||    
T  35070147 tgaggtattttaaaatacctctttgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaa 35070048  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  35070047 ttggggtatg 35070038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 22116304 - 22116413
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    |||||||||| |||||||| || ||| ||||||||  ||  |||  |||||||| ||||||  || ||||||||||||||||||| ||||||||||||||    
T  22116304 tgaggtatttaaaaatacctccctgccgaatttttttactgaaaaatcagagatcgatcagagttgagtgacatgtgtcagtggggccttaggtcaaaaa 22116403  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  22116404 ttggggtatg 22116413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 1961748 - 1961641
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    ||||||||||||||||||| | ||||  |||||| ||  |||  |||||||| ||||||  | |||||  ||||||||||||| ||||||||||||||||    
T  1961748 tgaggtattttaaaatacctctttgccaaattttcactgaaaaatcagagatcgatcagagtcaagtgttatgtgtcagtggggccttaggtcaaaaatt 1961649  T
Q  288 ggggtatg 295  Q
    ||||||||    
T  1961648 ggggtatg 1961641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 19367541 - 19367478
Alignment:
Q  232 tcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||| ||||||  | |||||||||||||||||||| ||||||||||||||||||||||||    
T  19367541 tcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatg 19367478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 20429419 - 20429356
Alignment:
Q  232 tcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||| ||||||  | |||||||| ||||||||||||||||||||||||||||||||||||    
T  20429419 tcagagatcgatcagagtcaagtgacaagtgtcagtgggaccttaggtcaaaaattggggtatg 20429356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 2336075 - 2336119
Alignment:
Q  251 aagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  2336075 aagtgacatgtgtcagtggggccttaggtcaaaaattggggtatg 2336119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 13185849 - 13185786
Alignment:
Q  232 tcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||| ||||  |||||||||| |||| ||||||||||||||||||| |||||    
T  13185849 tcagagattgatcagggttaaacgacatgtgtcggtggaaccttaggtcaaaaattggagtatg 13185786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 18098487 - 18098378
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || ||  ||||||||  ||  |||  |||||||| ||||||  | ||||||||||||| |||||| |||||||| |||||    
T  18098487 tgaggtattttaaaatacctccatgtcgaatttttccactgaaaaatcagagatcgatcagagtcaagtgacatgtgttagtggggccttaggttaaaaa 18098388  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  18098387 ttggggtatg 18098378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 44832509 - 44832618
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| |||||| ||||||||  ||  |||  |||||||| ||||||  | ||||||||||||||||||   |||||||| |||||    
T  44832509 tgaggtattttaaaatacctccttgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtgaagccttaggttaaaaa 44832608  T
Q  286 ttggggtatg 295  Q
    ||||| ||||    
T  44832609 ttgggatatg 44832618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 287
Target Start/End: Complemental strand, 47108484 - 47108384
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt-accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaat 286  Q
    |||||||||||||||||||  | ||| |||||||| ||  |||  |||||||| ||||||  | ||||||||||||| ||||||||||||||| ||||||    
T  47108484 tgaggtattttaaaataccttcctgcggaattttttactgaaaaatcagagatcgatcagagtcaagtgacatgtgtaagtgggaccttaggttaaaaat 47108385  T
Q  287 t 287  Q
    |    
T  47108384 t 47108384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 13450145 - 13450038
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    ||||||||||||||||||| || ||| ||||||| || ||||  |||||||| |||| |  | || ||||  | ||||||||||||||||||||||| ||    
T  13450145 tgaggtattttaaaatacctccctgccgaattttcactaaaaaatcagagatcgatccgagtcaaatgacgcgcgtcagtgggaccttaggtcaaaattt 13450046  T
Q  288 ggggtatg 295  Q
     |||||||    
T  13450045 agggtatg 13450038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 39454439 - 39454384
Alignment:
Q  240 tgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||| | || ||||||| ||||||| ||||||||||||||||||||||||||    
T  39454439 tgatcagggtcaaatgacatgcgtcagtgtgaccttaggtcaaaaattggggtatg 39454384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 295
Target Start/End: Complemental strand, 16884579 - 16884521
Alignment:
Q  237 gattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||| |||   |||| ||||||||||| ||||||||||||||||||||||||    
T  16884579 gattgatcagggttagacgacacgtgtcagtggggccttaggtcaaaaattggggtatg 16884521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 5624228 - 5624264
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  5624228 tgtgtcagtgggaccttaggtcaaaatttggggtatg 5624264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 5638367 - 5638403
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  5638367 tgtgtcagtgggaccttaggtcaaaatttggggtatg 5638403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 20979997 - 20980033
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  20979997 tgtgtcagtgggaccttaggtcaaaatttggggtatg 20980033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 22570920 - 22570956
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  22570920 tgtgtcagtgggaccttaggtcaaaatttggggtatg 22570956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 25926805 - 25926841
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  25926805 tgtgtcagtgggaccttaggtcaaaatttggggtatg 25926841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 188 - 287
Target Start/End: Complemental strand, 1955928 - 1955829
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    ||||||||||||||||||| | || |  |||||| ||  |||  |||||||| ||||||  | |||||| | ||||||||||| ||||||||||||||||    
T  1955928 tgaggtattttaaaatacctctttaccaaattttcactgaaaaatcagagatcgatcagagtcaagtgatacgtgtcagtggggccttaggtcaaaaatt 1955829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 295
Target Start/End: Complemental strand, 20518325 - 20518284
Alignment:
Q  254 tgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||| || ||||||| |||||||||||||||||||||||    
T  20518325 tgacatgcgttagtgggatcttaggtcaaaaattggggtatg 20518284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 9118 - 9225
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    ||||||||||||||||||| || ||| |||||||||   |||  |||||||| ||||||  | |||||||||||||||||| | ||||||||||||||||    
T  9118 tgaggtattttaaaatacctccctgccgaatttttattgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtgaggccttaggtcaaaaatt 9217  T
Q  288 ggggtatg 295  Q
    ||||||||    
T  9218 ggggtatg 9225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 14209 - 14102
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    ||||||||||||||||||| || ||| ||||||||||   ||  |||||||| ||||||  | |||||||||||||||||||| ||||||||||||||||    
T  14209 tgaggtattttaaaatacctccctgccgaatttttactggaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 14110  T
Q  288 ggggtatg 295  Q
    | ||||||    
T  14109 gaggtatg 14102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 8e-21; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 23378256 - 23378363
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    ||||||||||||||||||| || ||| ||||||||||   ||  |||||||| ||||||  | |||||||||||||||||||| ||||||||||||||||    
T  23378256 tgaggtattttaaaatacctccctgccgaatttttactggaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 23378355  T
Q  288 ggggtatg 295  Q
    | ||||||    
T  23378356 gaggtatg 23378363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 20092706 - 20092815
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || ||| ||||||||  ||  |||  |||||||| ||||||  | |||||||||||||||||||| ||||||||||||||    
T  20092706 tgaggtattttaaaatacctccctgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaa 20092805  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  20092806 ttggggtatg 20092815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 190 - 295
Target Start/End: Complemental strand, 36448359 - 36448252
Alignment:
Q  190 aggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    ||||||||||||||||| || ||| ||||||||  ||  |||  |||||||| ||||||  | |||||||||||||||||||| ||||||||||||||||    
T  36448359 aggtattttaaaatacctccctgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaatt 36448260  T
Q  288 ggggtatg 295  Q
    ||||||||    
T  36448259 ggggtatg 36448252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 40014987 - 40014879
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt-accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaat 286  Q
    ||||||||||||||||||| || ||| | |||||| ||  |||  |||||||| ||||||  | |||||||||||||||||||||||||| |||||||||    
T  40014987 tgaggtattttaaaatacctccctgccgcatttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtgggaccttaagtcaaaaat 40014888  T
Q  287 tggggtatg 295  Q
    |||||||||    
T  40014887 tggggtatg 40014879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 25526300 - 25526191
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || ||| ||||||||  ||  |||  |||||||| ||||||  |  ||||||||||||||||||| ||||||||||||||    
T  25526300 tgaggtattttaaaatacctccctgccgaatttttttactgaaaaatcagagatcgatcagattcgagtgacatgtgtcagtggggccttaggtcaaaaa 25526201  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  25526200 ttggggtatg 25526191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 26186602 - 26186711
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || ||| ||||||||  ||  |||  |||||||| ||||||  |  ||||||||||||||||||| ||||||||||||||    
T  26186602 tgaggtattttaaaatacctccctgccgaatttttttactgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaa 26186701  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  26186702 ttggggtatg 26186711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 191 - 295
Target Start/End: Original strand, 15956937 - 15957044
Alignment:
Q  191 ggtattttaaaataccaccttgctgaatttttacca---aaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    |||||||||||||||| || ||| ||||||||  ||   |||  |||||||| ||||||  | ||||||||||||||||||| |||||||||||||||||    
T  15956937 ggtattttaaaatacctccctgccgaatttttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggaaccttaggtcaaaaatt 15957036  T
Q  288 ggggtatg 295  Q
    ||||||||    
T  15957037 ggggtatg 15957044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 37048454 - 37048347
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    ||||||||||||||||||| |  ||| ||||||| ||  |||  |||||||| ||||||  | |||||||| |||||||||||| |||||||||||||||    
T  37048454 tgaggtattttaaaatacctctctgccgaattttcactgaaaaatcagagatcgatcagagtcaagtgacacgtgtcagtgggatcttaggtcaaaaatt 37048355  T
Q  288 ggggtatg 295  Q
     |||||||    
T  37048354 tgggtatg 37048347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 20099603 - 20099712
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    |||| |||||||||||||| || ||| ||||||||  ||  |||  |||||||| ||||||  | ||||||||||||| |||||| ||||||||||||||    
T  20099603 tgagttattttaaaatacctccctgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgttagtggggccttaggtcaaaaa 20099702  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  20099703 ttggggtatg 20099712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 25532980 - 25532871
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || ||| ||||||||  ||  |||  |||||||| ||||||  |  ||||||||||||||||||| ||||||||||||||    
T  25532980 tgaggtattttaaaatacctccctgccgaatttttttactgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaa 25532881  T
Q  286 ttggggtatg 295  Q
    ||||| ||||    
T  25532880 ttgggatatg 25532871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 36454739 - 36454630
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || ||| ||||||||  ||  |||  |||||||| ||||||  | |||||||||||||| ||| | ||||||||||||||    
T  36454739 tgaggtattttaaaatacctccctgccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtccgtgaggccttaggtcaaaaa 36454640  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  36454639 ttggggtatg 36454630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 189 - 295
Target Start/End: Original strand, 20639817 - 20639925
Alignment:
Q  189 gaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaat 286  Q
    |||||||||||||||||| || | | ||||||||  ||  |||  |||||||| ||||||  |  ||||||||||||||||||| |||||||||||||||    
T  20639817 gaggtattttaaaatacctccctcccgaatttttttactgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaaat 20639916  T
Q  287 tggggtatg 295  Q
    |||||||||    
T  20639917 tggggtatg 20639925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 21688192 - 21688156
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||||||||||||||    
T  21688192 tgtgtcagtgggaccttaggtcaaaaattggggtatg 21688156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 21696111 - 21696075
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||||||||||||||    
T  21696111 tgtgtcagtgggaccttaggtcaaaaattggggtatg 21696075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 295
Target Start/End: Original strand, 23577423 - 23577502
Alignment:
Q  218 tttttaccaaaacgtcagagatt--gatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||  |||||||||||| |  ||||||| ||||| |||  |||||| |||||||||||||||||||||||||||||    
T  23577423 tttttactgaaacgtcagagactctgatcagggttaagcgacgcgtgtcaatgggaccttaggtcaaaaattggggtatg 23577502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 26553292 - 26553328
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||||||||||||||    
T  26553292 tgtgtcagtgggaccttaggtcaaaaattggggtatg 26553328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 29901284 - 29901232
Alignment:
Q  243 tcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||  ||||  |||||||||||||||||||||||||||||||||||    
T  29901284 tcaggattaaacgacaactgtcagtgggaccttaggtcaaaaattggggtatg 29901232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 25677874 - 25677925
Alignment:
Q  244 caggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||| |||| ||||||||||| ||| ||||||||||||||||||||||||||    
T  25677874 cagggttaaatgacatgtgtcggtgtgaccttaggtcaaaaattggggtatg 25677925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 7255025 - 7255131
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttacca-aaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaat 286  Q
    ||||||||||||||||||| || ||| ||||||||  |  ||||||  |||| |||||||| |||| || |  |||||||||||| ||| ||||||||||    
T  7255025 tgaggtattttaaaatacctccctgccgaatttttcgctgaaacgt--gagactgatcagggttaaatggcgcgtgtcagtgggatcttgggtcaaaaat 7255122  T
Q  287 tggggtatg 295  Q
    |||||||||    
T  7255123 tggggtatg 7255131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 7262467 - 7262573
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttacca-aaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaat 286  Q
    ||||||||||||||||||| || ||| ||||||||  |  ||||||  |||| |||||||| |||| || |  |||||||||||| ||| ||||||||||    
T  7262467 tgaggtattttaaaatacctccctgccgaatttttcgctgaaacgt--gagactgatcagggttaaatggcgcgtgtcagtgggatcttgggtcaaaaat 7262564  T
Q  287 tggggtatg 295  Q
    |||||||||    
T  7262565 tggggtatg 7262573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 12387278 - 12387314
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  12387278 tgtgtcagtgggaccttaggtcaaaatttggggtatg 12387314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 12395971 - 12396007
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  12395971 tgtgtcagtgggaccttaggtcaaaatttggggtatg 12396007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 15779770 - 15779806
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  15779770 tgtgtcagtgggaccttaggtcaaaatttggggtatg 15779806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 15794005 - 15794041
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  15794005 tgtgtcagtgggaccttaggtcaaaatttggggtatg 15794041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 17948023 - 17947987
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  17948023 tgtgtcagtgggaccttaggtcaaaatttggggtatg 17947987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 17961913 - 17961877
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  17961913 tgtgtcagtgggaccttaggtcaaaatttggggtatg 17961877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 31511245 - 31511209
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  31511245 tgtgtcagtgggaccttaggtcaaaatttggggtatg 31511209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 31525369 - 31525333
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  31525369 tgtgtcagtgggaccttaggtcaaaatttggggtatg 31525333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 260 - 295
Target Start/End: Complemental strand, 7786476 - 7786441
Alignment:
Q  260 gtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||||||||||||||| ||||||||||    
T  7786476 gtgtcagtgggaccttaggtcaaaatttggggtatg 7786441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 260 - 295
Target Start/End: Complemental strand, 7794326 - 7794291
Alignment:
Q  260 gtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||||||||||||||| ||||||||||    
T  7794326 gtgtcagtgggaccttaggtcaaaatttggggtatg 7794291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 295
Target Start/End: Original strand, 11939622 - 11939676
Alignment:
Q  241 gatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||| | |||||||| |||||||||||| ||| |||||||| ||||||||||    
T  11939622 gatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatg 11939676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 5435751 - 5435787
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  5435751 tgtgtcagtgggacctttggtcaaaatttggggtatg 5435787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 5449571 - 5449607
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  5449571 tgtgtcagtgggacctttggtcaaaatttggggtatg 5449607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 295
Target Start/End: Original strand, 21728986 - 21729014
Alignment:
Q  267 tgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||||||    
T  21728986 tgggaccttaggtcaaaaattggggtatg 21729014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 25450636 - 25450672
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  25450636 tgtgtcagtgggacctttggtcaaaatttggggtatg 25450672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 34314273 - 34314309
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  34314273 tgtgtcggtgggaccttaggtcaaaatttggggtatg 34314309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 36371315 - 36371351
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  36371315 tgtgttagtgggaccttaggtcaaaatttggggtatg 36371351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 36385243 - 36385279
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  36385243 tgtgttagtgggaccttaggtcaaaatttggggtatg 36385279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 36995978 - 36996014
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  36995978 tgtgttagtgggaccttaggtcaaaatttggggtatg 36996014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 37009916 - 37009952
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  37009916 tgtgttagtgggaccttaggtcaaaatttggggtatg 37009952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0378 (Bit Score: 49; Significance: 5e-19; HSPs: 3)
Name: scaffold0378
Description:

Target: scaffold0378; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 881 - 773
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt-accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaat 286  Q
    ||||||||||||||||||| || ||| |||||||| |   |||  |||||||||||||||| ||||  |||  |||||||||||||||||||||||||||    
T  881 tgaggtattttaaaatacctccctgccgaatttttcattgaaaaatcagagattgatcagggttaaacgacgcgtgtcagtgggaccttaggtcaaaaat 782  T
Q  287 tggggtatg 295  Q
    |||||||||    
T  781 tggggtatg 773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0378; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 295
Target Start/End: Complemental strand, 3374 - 3339
Alignment:
Q  260 gtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||||||||||||||||||||||||||    
T  3374 gtgtcagtgggaccttaggtcaaaaattggggtatg 3339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0378; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 295
Target Start/End: Complemental strand, 15854 - 15819
Alignment:
Q  260 gtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||||||||||||||||||||||||||    
T  15854 gtgtcagtgggaccttaggtcaaaaattggggtatg 15819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 16492 - 16600
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt-accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaat 286  Q
    ||||||||||||||||||| || ||| |||||||| |   |||  |||||||||||||||| ||||  |||  |||||||||||||||||||||||||||    
T  16492 tgaggtattttaaaatacctccctgccgaatttttcattgaaaaatcagagattgatcagggttaaacgacgcgtgtcagtgggaccttaggtcaaaaat 16591  T
Q  287 tggggtatg 295  Q
    |||||||||    
T  16592 tggggtatg 16600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 7596 - 7703
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    ||||||||||||||||||| || ||| |||||||||   |||  |||||||| ||||||  | |||||||| ||||||||||| ||||||||||||||||    
T  7596 tgaggtattttaaaatacctccctgccgaatttttattgaaaaatcagagatcgatcagagtcaagtgacaagtgtcagtggggccttaggtcaaaaatt 7695  T
Q  288 ggggtatg 295  Q
     |||||||    
T  7696 agggtatg 7703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 1870 - 1979
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattg--atcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || ||| ||||||||||  ||| |||||||| |   |||||| |||| ||||  ||||||||| ||||||||||||||||    
T  1870 tgaggtattttaaaatacctccctgccgaatttttactgaaatgtcagagactcttatcagggttaaatgacgcgtgtcagtgagaccttaggtcaaaaa 1969  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  1970 ttggggtatg 1979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 6437 - 6546
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttaccaaaacgtcagagattg--atcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || ||| ||||||||||  ||| |||||||| |   |||||| |||| ||||  ||||||||| ||||||||||||||||    
T  6437 tgaggtattttaaaatacctccctgccgaatttttactgaaatgtcagagactcttatcagggttaaatgacgcgtgtcagtgagaccttaggtcaaaaa 6536  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  6537 ttggggtatg 6546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 65950 - 65841
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaatttttacca--aaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || ||| |||||||| | |  |||  |||||||| ||||||  | ||||||||||||| |||||| ||||||||||||||    
T  65950 tgaggtattttaaaatacctccctgccgaattttttcaatgaaaaatcagagatcgatcagagtcaagtgacatgtgtgagtggggccttaggtcaaaaa 65851  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  65850 ttggggtatg 65841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 86649 - 86759
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt---accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaa 284  Q
    ||||||||||||||||||| || ||| ||||||||   || ||||  |||||||| ||||||  |  ||||||||||||||||||| |||||||||||||    
T  86649 tgaggtattttaaaatacctccctgccgaattttttttactaaaaaatcagagatcgatcagagtcgagtgacatgtgtcagtggggccttaggtcaaaa 86748  T
Q  285 attggggtatg 295  Q
    ||| |||||||    
T  86749 attagggtatg 86759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 23694 - 23586
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt-accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaat 286  Q
    ||||||||||||||||||| || ||  |||||||| |   |||  |||||||| ||||||  | |||||||||||||||||||| |||||||||||||||    
T  23694 tgaggtattttaaaatacctccctgtcgaatttttcattgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaat 23595  T
Q  287 tggggtatg 295  Q
    |||||||||    
T  23594 tggggtatg 23586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 295
Target Start/End: Original strand, 398 - 452
Alignment:
Q  241 gatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||| | |||||||| |||||||||||| ||| |||||||| ||||||||||    
T  398 gatcagggtcaagtgacacgtgtcagtgggatcttgggtcaaaatttggggtatg 452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 22112 - 22049
Alignment:
Q  232 tcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||| ||||||  | |||||||||||||||||||| ||||||||||||||||||||||||    
T  22112 tcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatg 22049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 96848 - 96785
Alignment:
Q  232 tcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||| ||||||  | |||||||||||||||||||| ||||||||||||||||||||||||    
T  96848 tcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggtcaaaaattggggtatg 96785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 6274 - 6383
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    |||| |||||||||||||| || ||| ||||||||  ||  |||  |||||||| ||||||  | |||||||||||||||||||| ||||||| ||||||    
T  6274 tgagatattttaaaatacctccctgccgaatttttttactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggccttaggacaaaaa 6373  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  6374 ttggggtatg 6383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 10451 - 10342
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || |||| |||||||  ||  |||  |||||||| ||||||  |  ||||||||||||||| ||| ||||||||||||||    
T  10451 tgaggtattttaaaatacctccctgctaaatttttttactgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagcggggccttaggtcaaaaa 10352  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  10351 ttggggtatg 10342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 19876 - 19767
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || |||| |||||||  ||  |||  |||||||| ||||||  |  ||||||||||||||| ||| ||||||||||||||    
T  19876 tgaggtattttaaaatacctccctgctaaatttttttactgaaaaatcagagatcgatcagagtcgagtgacatgtgtcagcggggccttaggtcaaaaa 19777  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  19776 ttggggtatg 19767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 89827 - 89936
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| || ||| ||||||||  ||  |||  |||||||| ||| ||  | ||||||||| |||||||||| ||||||||||||||    
T  89827 tgaggtattttaaaatacctccctgccgaattttttcactgaaaaatcagagatcgataagagtcaagtgacatatgtcagtggggccttaggtcaaaaa 89926  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  89927 ttggggtatg 89936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0441 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0441
Description:

Target: scaffold0441; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 226 - 295
Target Start/End: Complemental strand, 2543 - 2474
Alignment:
Q  226 aaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||| ||||| || |||||||| | || ||||||| ||||||||||||||||||||||||||||||||||    
T  2543 aaaaagtcagggactgatcagggtcaaatgacatgcgtcagtgggaccttaggtcaaaaattggggtatg 2474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1922 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1922
Description:

Target: scaffold1922; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 190 - 295
Target Start/End: Original strand, 171 - 278
Alignment:
Q  190 aggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaatt 287  Q
    ||||||||||||||||| ||  || ||||||||  ||  |||  |||||||| ||||||  | |||||||||||||||||||| | ||||||||||||||    
T  171 aggtattttaaaatacctcccagccgaattttttcactgaaaaatcagagatcgatcagagtcaagtgacatgtgtcagtggggcattaggtcaaaaatt 270  T
Q  288 ggggtatg 295  Q
    ||||||||    
T  271 ggggtatg 278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 41219 - 41327
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt-accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaat 286  Q
    ||||||||||||||||||| |  ||  |||||||| ||  |||  |||||||||||||||| ||||  |||  |||||||||||| ||||||||||||||    
T  41219 tgaggtattttaaaatacctctctgtcgaatttttcactgaaaaatcagagattgatcagggttaaacgacgcgtgtcagtgggatcttaggtcaaaaat 41318  T
Q  287 tggggtatg 295  Q
    |||||||||    
T  41319 tggggtatg 41327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 27735 - 27778
Alignment:
Q  252 agtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  27735 agtgacatgtgtcagtggggccttaggtcaaaaattggggtatg 27778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 29067 - 29175
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt-accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaat 286  Q
    |||||||||| |||||||| |  ||| |||||||| ||  |||  |||||||||||||||| ||||  |||  |||||||||||||||||||||||||||    
T  29067 tgaggtatttcaaaatacctctctgccgaatttttcactgaaaaatcagagattgatcagggttaaacgacgcgtgtcagtgggaccttaggtcaaaaat 29166  T
Q  287 tggggtatg 295  Q
    ||| |||||    
T  29167 tggagtatg 29175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 38618 - 38661
Alignment:
Q  252 agtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  38618 agtgacatgtgtcagtggggccttaggtcaaaaattggggtatg 38661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 7798 - 7861
Alignment:
Q  232 tcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||| ||||||  | ||||||||||||| |||||| ||||||||||||||||||||||||    
T  7798 tcagagatcgatcagagtcaagtgacatgtgttagtggggccttaggtcaaaaattggggtatg 7861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 11537 - 11473
Alignment:
Q  231 gtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||| || |||||||| | || |||||||||| |||||| ||||||||||||||||||||||||    
T  11537 gtcagggactgatcagggtcaaatgacatgtgttagtgggtccttaggtcaaaaattggggtatg 11473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 129 - 239
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt---accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaa 284  Q
    ||||||||||||||||||| || ||| ||||||||   ||  |||  |||||||| ||||||  |  ||||||| ||||||||| | |||||||||||||    
T  129 tgaggtattttaaaatacctccctgccgaattttttatactgaaaaatcagagatcgatcagagtcgagtgacaagtgtcagtgaggccttaggtcaaaa 228  T
Q  285 attggggtatg 295  Q
    |||||||||||    
T  229 attggggtatg 239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 17799 - 17835
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||||||||||||||    
T  17799 tgtgtcagtgggaccttaggtcaaaaattggggtatg 17835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 25718 - 25754
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||||||||||||||    
T  25718 tgtgtcagtgggaccttaggtcaaaaattggggtatg 25754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 37; Significance: 0.000000000007; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 38091 - 38135
Alignment:
Q  251 aagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||    
T  38091 aagtgacacgtgtcagtggggccttaggtcaaaaattggggtatg 38135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 20251 - 20215
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  20251 tgtgtcagtgggaccttaggtcaaaatttggggtatg 20215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 33992 - 33956
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  33992 tgtgtcagtgggaccttaggtcaaaatttggggtatg 33956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0458 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0458
Description:

Target: scaffold0458; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 9279 - 9334
Alignment:
Q  240 tgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||| | || ||||||| ||||||| ||||||||||||||||||||||||||    
T  9279 tgatcagggtcaaatgacatgcgtcagtgtgaccttaggtcaaaaattggggtatg 9334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0435 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0435
Description:

Target: scaffold0435; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 8384 - 8435
Alignment:
Q  244 caggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||| |||| ||||||||||| ||| ||||||||||||||||||||||||||    
T  8384 cagggttaaatgacatgtgtcggtgtgaccttaggtcaaaaattggggtatg 8435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 295
Target Start/End: Complemental strand, 15756 - 15647
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt--accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaa 285  Q
    ||||||||||||||||||| ||| |  ||||||||  ||  |||  ||| |||| ||||||  | |||||||||||||||||||| ||||||  ||||||    
T  15756 tgaggtattttaaaataccccctcgtcgaatttttttactgaaaaatcatagatcgatcagagtcaagtgacatgtgtcagtggggccttagaacaaaaa 15657  T
Q  286 ttggggtatg 295  Q
    ||||||||||    
T  15656 ttggggtatg 15647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 252 - 289
Target Start/End: Original strand, 1397 - 1434
Alignment:
Q  252 agtgacatgtgtcagtgggaccttaggtcaaaaattgg 289  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  1397 agtgacatgtgtcagtggggccttaggtcaaaaattgg 1434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 295
Target Start/End: Complemental strand, 20856 - 20795
Alignment:
Q  234 agagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||| |||||| ||||  |||| |||||||||||| ||||||| |||||||||||||||    
T  20856 agagattaatcagggttaaacgacacgtgtcagtgggatcttaggtaaaaaattggggtatg 20795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1888 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1888
Description:

Target: scaffold1888; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 1004 - 1112
Alignment:
Q  188 tgaggtattttaaaataccaccttgctgaattttt-accaaaacgtcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaat 286  Q
    ||||||||||||||||||| || |||  ||||||| ||  ||| || | ||  |||||||| | |||||||| ||||| |||||| ||| ||||||||||    
T  1004 tgaggtattttaaaatacctccctgccaaatttttcactgaaatgttaaagtctgatcagggtcaagtgacacgtgtcggtgggatcttgggtcaaaaat 1103  T
Q  287 tggggtatg 295  Q
    |||||||||    
T  1104 tggggtatg 1112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1719 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1719
Description:

Target: scaffold1719; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 17 - 53
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  17 tgtgtcagtgggaccttaggtcaaaatttggggtatg 53  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 9360 - 9400
Alignment:
Q  255 gacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||| |||||||||||| |||||||||||||||||||||||    
T  9360 gacaagtgtcagtgggaacttaggtcaaaaattggggtatg 9400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 2800 - 2836
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  2800 tgtgtcagtgggaccttaggtcaaaatttggggtatg 2836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 1754 - 1718
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  1754 tgtgtcagtgggaccttaggtcaaaatttggggtatg 1718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 295
Target Start/End: Original strand, 38545 - 38601
Alignment:
Q  239 ttgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||| ||||  ||||  ||||||||||||||||||||||||||| |||||||    
T  38545 ttgatcagggttaaacgacaattgtcagtgggaccttaggtcaaaaattcgggtatg 38601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 9209 - 9245
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||||||||||||||||| ||||||||||    
T  9209 tgtgtcagtgggaccttaggtcaaaatttggggtatg 9245  T

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Target: scaffold0498 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 10459 - 10396
Alignment:
Q  232 tcagagattgatcaggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||| |||||||| ||||  |||  ||||| |||||||||||||| |||||||||||||||    
T  10459 tcagagagtgatcagggttaaacgacgcgtgtctgtgggaccttaggtaaaaaattggggtatg 10396  T

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Target: scaffold0362 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 4805 - 4856
Alignment:
Q  244 caggattaagtgacatgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||| |||| ||||||||||| ||| ||||||||||||||||||| ||||||    
T  4805 cagggttaaatgacatgtgtcggtgtgaccttaggtcaaaaattgtggtatg 4856  T

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Target: scaffold0183 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 295
Target Start/End: Complemental strand, 20711 - 20682
Alignment:
Q  266 gtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||||||||||||||||||||    
T  20711 gtgggaccttaggtcaaaaattggggtatg 20682  T

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Target: scaffold1634 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1634
Description:

Target: scaffold1634; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 1036 - 1000
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  1036 tgtgtcagtgggatcttaggtcaaaatttggggtatg 1000  T

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Target: scaffold0755 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0755
Description:

Target: scaffold0755; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 1002 - 966
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  1002 tgtgtcagtggggccttaggtcaaaatttggggtatg 966  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 202701 - 202737
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  202701 tgtgtcagtgggacctttggtcaaaatttggggtatg 202737  T

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Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 295
Target Start/End: Original strand, 208778 - 208814
Alignment:
Q  259 tgtgtcagtgggaccttaggtcaaaaattggggtatg 295  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  208778 tgtgtcagtgggacctttggtcaaaatttggggtatg 208814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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