View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8961_low_67 (Length: 233)

Name: NF8961_low_67
Description: NF8961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8961_low_67
NF8961_low_67
[»] chr4 (4 HSPs)
chr4 (1-122)||(2547037-2547158)
chr4 (42-122)||(35783779-35783859)
chr4 (42-122)||(5444778-5444859)
chr4 (46-123)||(5440887-5440965)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-122)||(111544-111665)
[»] chr5 (7 HSPs)
chr5 (1-122)||(21256637-21256758)
chr5 (1-123)||(21254165-21254287)
chr5 (1-123)||(26873160-26873282)
chr5 (38-121)||(4730657-4730741)
chr5 (85-123)||(41951730-41951768)
chr5 (84-122)||(43233925-43233963)
chr5 (85-122)||(41949333-41949370)
[»] scaffold0862 (1 HSPs)
scaffold0862 (1-124)||(239-362)
[»] chr6 (7 HSPs)
chr6 (1-123)||(8655826-8655948)
chr6 (33-123)||(6825507-6825597)
chr6 (1-122)||(30689634-30689755)
chr6 (33-122)||(6823035-6823124)
chr6 (45-122)||(4555733-4555810)
chr6 (42-123)||(24249778-24249859)
chr6 (42-115)||(1136235-1136309)
[»] scaffold0525 (1 HSPs)
scaffold0525 (1-122)||(2028-2149)
[»] chr2 (7 HSPs)
chr2 (1-124)||(31269461-31269584)
chr2 (1-122)||(31180235-31180355)
chr2 (122-218)||(2484798-2484896)
chr2 (1-123)||(24038280-24038402)
chr2 (1-122)||(24039475-24039596)
chr2 (8-122)||(36402684-36402798)
chr2 (160-208)||(2373628-2373676)
[»] chr7 (7 HSPs)
chr7 (1-123)||(41830217-41830339)
chr7 (1-123)||(41832623-41832745)
chr7 (1-122)||(8083389-8083510)
chr7 (1-122)||(25432083-25432205)
chr7 (42-96)||(23613779-23613833)
chr7 (156-197)||(24939126-24939166)
chr7 (132-212)||(31494831-31494910)
[»] chr8 (6 HSPs)
chr8 (1-123)||(7277748-7277870)
chr8 (1-123)||(7275143-7275265)
chr8 (1-115)||(3567495-3567612)
chr8 (1-123)||(13856687-13856810)
chr8 (93-124)||(12464815-12464846)
chr8 (85-122)||(5690859-5690896)
[»] chr1 (4 HSPs)
chr1 (1-123)||(18705707-18705829)
chr1 (120-199)||(49459558-49459636)
chr1 (84-122)||(2427331-2427369)
chr1 (166-212)||(9191775-9191821)
[»] chr3 (13 HSPs)
chr3 (8-122)||(782838-782954)
chr3 (42-122)||(10018777-10018857)
chr3 (42-123)||(19954450-19954531)
chr3 (42-122)||(10123317-10123397)
chr3 (42-122)||(10256091-10256171)
chr3 (42-122)||(10179974-10180054)
chr3 (44-122)||(10514351-10514429)
chr3 (8-122)||(10661756-10661871)
chr3 (8-122)||(10511027-10511141)
chr3 (42-122)||(10613346-10613426)
chr3 (85-122)||(17743104-17743141)
chr3 (85-122)||(19044424-19044461)
chr3 (83-123)||(548457-548497)
[»] scaffold0001 (2 HSPs)
scaffold0001 (33-122)||(144661-144750)
scaffold0001 (33-123)||(146719-146809)
[»] scaffold0251 (1 HSPs)
scaffold0251 (1-88)||(4632-4719)
[»] scaffold0959 (1 HSPs)
scaffold0959 (67-122)||(408-463)
[»] scaffold0655 (1 HSPs)
scaffold0655 (1-121)||(661-782)


Alignment Details
Target: chr4 (Bit Score: 114; Significance: 6e-58; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 2547037 - 2547158
Alignment:
Q  1 aaataacttgtaaccaccccattagagggaacttttctcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttcc 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2547037 aaataacttgtaaccaccccattagagggaacttttctcattttgtaatattccatttctatcaatacaaagagtttgttagatttctctccttccttcc 2547136  T
Q  101 atggatgccatgtttcctaaca 122  Q
    ||||||| ||||||||||||||    
T  2547137 atggatgtcatgtttcctaaca 2547158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 35783779 - 35783859
Alignment:
Q  42 tttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttccatggatgccatgtttcctaaca 122  Q
    |||||||||||||||||  |||||||||||||||||||||| |||  ||||||| |||||||||||||||||||| |||||    
T  35783779 tttgtaatattccatttcaatcaatacaaagagtttgttagtttttcctccttctttccatggatgccatgtttcttaaca 35783859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 42 - 122
Target Start/End: Original strand, 5444778 - 5444859
Alignment:
Q  42 tttgtaatattccatttatatcaatacaaagagtttgttag-atttctctccttccttccatggatgccatgtttcctaaca 122  Q
    |||||||||||||||||  ||||||||||||||||||||||  |||| ||||||| |||||| |||||||||||||||||||    
T  5444778 tttgtaatattccatttcaatcaatacaaagagtttgttagtttttccctccttctttccatagatgccatgtttcctaaca 5444859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 123
Target Start/End: Original strand, 5440887 - 5440965
Alignment:
Q  46 taatattccatttatatcaatacaaagagtttgttag-atttctctccttccttccatggatgccatgtttcctaacat 123  Q
    ||||||| |||||  ||||||||||||||||||||||  ||| |||||||| ||  || ||||||||||||||||||||    
T  5440887 taatatttcatttcaatcaatacaaagagtttgttagtttttttctccttctttttatagatgccatgtttcctaacat 5440965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 111665 - 111544
Alignment:
Q  1 aaataacttgtaaccaccccattagagggaacttttctcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||| ||||||||||||||||||    
T  111665 aaataacttgtaaccaccccattagagggaacttttctcattttgtaatattccatttaaatcaataaaaagagtttattaaatttctctccttccttcc 111566  T
Q  101 atggatgccatgtttcctaaca 122  Q
    ||||||||||||||||||||||    
T  111565 atggatgccatgtttcctaaca 111544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 3e-53; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 21256637 - 21256758
Alignment:
Q  1 aaataacttgtaaccaccccattagagggaacttttctcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||||||    
T  21256637 aaataacttgtaaccaccccattagagggaacttttctcattttgtaatattccattttcatcaatagaaagagtttgttagttttctctccttccttcc 21256736  T
Q  101 atggatgccatgtttcctaaca 122  Q
    ||||||||||||||||||||||    
T  21256737 atggatgccatgtttcctaaca 21256758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 21254165 - 21254287
Alignment:
Q  1 aaataacttgtaaccaccccattagagggaacttttctcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttcc 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||  ||||||| |||||||||||||  |||||||||||||||||    
T  21254165 aaataacttgtaaccgccccattagagggaacttttctcattttgtaatattcctttttcatcaatagaaagagtttgttacttttctctccttccttcc 21254264  T
Q  101 atggatgccatgtttcctaacat 123  Q
    |||||||||||||||||||||||    
T  21254265 atggatgccatgtttcctaacat 21254287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 26873282 - 26873160
Alignment:
Q  1 aaataacttgtaaccaccccattagagggaacttttctcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttcc 100  Q
    ||||||||||||| ||  |||||||||| |||||||||||||| ||||||||| ||||  ||||||| ||||||||| |||| |||||||||||||||||    
T  26873282 aaataacttgtaatcattccattagaggaaacttttctcatttcgtaatattctatttccatcaatagaaagagtttcttagttttctctccttccttcc 26873183  T
Q  101 atggatgccatgtttcctaacat 123  Q
    |||||||||||||||||||||||    
T  26873182 atggatgccatgtttcctaacat 26873160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 38 - 121
Target Start/End: Original strand, 4730657 - 4730741
Alignment:
Q  38 tcattttgtaatattccatttatatcaatacaaagagtttgttag--atttctctccttccttccatggatgccatgtttcctaac 121  Q
    |||||||||||||||||||||  ||||||||||||||||||||||   ||| ||||||| | ||||||||||||||||||||||||    
T  4730657 tcattttgtaatattccatttccatcaatacaaagagtttgttagctttttttctcctt-catccatggatgccatgtttcctaac 4730741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 123
Target Start/End: Complemental strand, 41951768 - 41951730
Alignment:
Q  85 ttctctccttccttccatggatgccatgtttcctaacat 123  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  41951768 ttctctcattccttccatggatgccatgtttcctaacat 41951730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 43233925 - 43233963
Alignment:
Q  84 tttctctccttccttccatggatgccatgtttcctaaca 122  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  43233925 tttctctcattccttccatggatgccatgtttcctaaca 43233963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 122
Target Start/End: Complemental strand, 41949370 - 41949333
Alignment:
Q  85 ttctctccttccttccatggatgccatgtttcctaaca 122  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  41949370 ttctctcattccttccatggatgccatgtttcctaaca 41949333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0862 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0862
Description:

Target: scaffold0862; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 239 - 362
Alignment:
Q  1 aaataacttgtaaccaccccattagagggaacttttctcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||| |||| ||||||||||||||| |    
T  239 aaataacttgtaaccaccccattagagggaacttttctcattttgtaatattccattttcatcaatagaaagagtttcttagttttctctccttcctttc 338  T
Q  101 atggatgccatgtttcctaacata 124  Q
    ||||||||||||||||||||||||    
T  339 atggatgccatgtttcctaacata 362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 99; Significance: 5e-49; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 8655948 - 8655826
Alignment:
Q  1 aaataacttgtaaccaccccattagagggaacttttctcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||| |||| ||||||||||||||||     
T  8655948 aaataacttgtaaccaccccattagagggaacttttctcattttgtaatattccatttccatcaatagaaagagtttcttagttttctctccttccttct 8655849  T
Q  101 atggatgccatgtttcctaacat 123  Q
    |||||||||||||||||||||||    
T  8655848 atggatgccatgtttcctaacat 8655826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 6825597 - 6825507
Alignment:
Q  33 ttttctcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttccatggatgccatgtttcctaacat 123  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6825597 ttttctcattttgtaatattccatttctatcaatacaaagagtttgttagatttatctccttccttccatggatgccatgtttcctaacat 6825507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 30689755 - 30689634
Alignment:
Q  1 aaataacttgtaaccaccccattagagggaacttttctcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttcc 100  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||| || ||  ||||||| ||||||||| |||| |||||||| |||||| |    
T  30689755 aaataatttgtaaccaccccattagagggtacttttctcattttgtaatatttcactttcatcaatagaaagagtttcttagttttctctcattcctttc 30689656  T
Q  101 atggatgccatgtttcctaaca 122  Q
    ||||||||||||||||||||||    
T  30689655 atggatgccatgtttcctaaca 30689634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 6823124 - 6823035
Alignment:
Q  33 ttttctcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttccatggatgccatgtttcctaaca 122  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||| ||||||    
T  6823124 ttttctcattttgtaatattccatttctatcaatacaaagagtttgttagatttatctccttccttccatgaatgtcatgttttctaaca 6823035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 45 - 122
Target Start/End: Original strand, 4555733 - 4555810
Alignment:
Q  45 gtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttccatggatgccatgtttcctaaca 122  Q
    |||||||| ||||| |||||||||||||||||||||||||||  |||||||  || ||||||||||||||||||||||    
T  4555733 gtaatatttcatttctatcaatacaaagagtttgttagattttgctccttcgatctatggatgccatgtttcctaaca 4555810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 42 - 123
Target Start/End: Original strand, 24249778 - 24249859
Alignment:
Q  42 tttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttccatggatgccatgtttcctaacat 123  Q
    |||||||||||||||||  || ||||||||||||||||||| |||||||| ||| || ||| ||||||||||||||||||||    
T  24249778 tttgtaatattccatttccattaatacaaagagtttgttagttttctctcattctttacattgatgccatgtttcctaacat 24249859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 1136309 - 1136235
Alignment:
Q  42 tttgtaatattccatttatatcaatacaaagag-tttgttagatttctctccttccttccatggatgccatgttt 115  Q
    |||||||||||| ||||  ||||||| |||||| |||| || ||||||||| ||||||||||||||| |||||||    
T  1136309 tttgtaatattcaatttccatcaatataaagagatttgctatatttctctcattccttccatggatgtcatgttt 1136235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 2149 - 2028
Alignment:
Q  1 aaataacttgtaaccaccccattagagggaacttttctcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||| |||| |||||||||||||||||    
T  2149 aaataacttgtaaccaccccattagagggaacttttctcattttgtaatattccatttccatcaatagaaagagtttcttagttttctctccttccttcc 2050  T
Q  101 atggatgccatgtttcctaaca 122  Q
    ||||||||||||||||| ||||    
T  2049 atggatgccatgtttcccaaca 2028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 3e-47; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 31269584 - 31269461
Alignment:
Q  1 aaataacttgtaaccaccccattagagggaacttttctcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttcc 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||| ||||||||| |||| |||||||||||||||||    
T  31269584 aaataacttgtaaccaccccattagagggtacttttctcattttgtaatattcaatttccatcaatagaaagagtttcttagttttctctccttccttcc 31269485  T
Q  101 atggatgccatgtttcctaacata 124  Q
    ||||||||||||||||||||||||    
T  31269484 atggatgccatgtttcctaacata 31269461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 31180235 - 31180355
Alignment:
Q  1 aaataacttgtaaccaccccattagagggaacttttctcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttcc 100  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||  ||||||| ||||||||| |||| |||||||||||||||||    
T  31180235 aaataacttctaaccaccccattagaggga-cttttctcattttgtaatattccatttccatcaatagaaagagtttcttagttttctctccttccttcc 31180333  T
Q  101 atggatgccatgtttcctaaca 122  Q
    |||||||||||| |||||||||    
T  31180334 atggatgccatgcttcctaaca 31180355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 122 - 218
Target Start/End: Complemental strand, 2484896 - 2484798
Alignment:
Q  122 atatttattctattattagcaatacatttttt--ctaaggaatgagttttgattttattaagtaacttttattattatattagtggtcaatctcataat 218  Q
    |||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2484896 atatttattctattattatcaatacattttttttctaaggaatgagttttgattttattaagtaacttttattattatattagtggtcaatctcataat 2484798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 24038280 - 24038402
Alignment:
Q  1 aaataacttgtaaccaccccattagagggaacttttctcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttcc 100  Q
    ||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||  ||||||| ||| ||||| |||| |||||||| ||||||||    
T  24038280 aaataacttgtaaccactccattagagggcacttttctcatattgtaatattccattttcatcaatagaaaaagtttcttagttttctctcattccttcc 24038379  T
Q  101 atggatgccatgtttcctaacat 123  Q
    ||||||||||||||| |||||||    
T  24038380 atggatgccatgttttctaacat 24038402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 24039475 - 24039596
Alignment:
Q  1 aaataacttgtaaccaccccattagagggaacttttctcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttcc 100  Q
    |||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||  ||||||| ||| ||||| |||| |||||||| ||||||||    
T  24039475 aaataacttgtaaccacctcattagagggcacttttctcatattgtaatattccattttcatcaatagaaaaagtttcttagttttctctcattccttcc 24039574  T
Q  101 atggatgccatgtttcctaaca 122  Q
    ||||||||||||||| ||||||    
T  24039575 atggatgccatgttttctaaca 24039596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 122
Target Start/End: Complemental strand, 36402798 - 36402684
Alignment:
Q  8 ttgtaaccaccccattagaggg-aactttt-ctcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttccatgga 105  Q
    |||||||||||||||||| ||| ||||||  ||||||| ||||||||| ||||  ||||||||||||||||||| ||||||||||||||| |||||||||    
T  36402798 ttgtaaccaccccattagtgggtaactttcactcattt-gtaatattctatttccatcaatacaaagagtttgt-agatttctctccttcattccatgga 36402701  T
Q  106 tgccatgtttcctaaca 122  Q
    |  |||||||| |||||    
T  36402700 tatcatgtttcataaca 36402684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 2373628 - 2373676
Alignment:
Q  160 aatgagttttgattttattaagtaacttttattattatattagtggtca 208  Q
    ||||||||||||||||||||| ||||  |||||||||||||||| ||||    
T  2373628 aatgagttttgattttattaactaaccattattattatattagtagtca 2373676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 1e-46; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 41830217 - 41830339
Alignment:
Q  1 aaataacttgtaaccaccccattagagggaacttttctcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| |||| |||||||| ||||||||    
T  41830217 aaataacttgtaaccaccccattagagggaacttttctcattttgtaatattcaatttacatcaatagaaagagtttcttagttttctctcattccttcc 41830316  T
Q  101 atggatgccatgtttcctaacat 123  Q
    ||||||| |||||||||||||||    
T  41830317 atggatgacatgtttcctaacat 41830339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 41832623 - 41832745
Alignment:
Q  1 aaataacttgtaaccaccccattagagggaacttttctcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttcc 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||| ||||||||| |||| |||||||| ||||||||    
T  41832623 aaataacttgtaaccaccccattagagggtacttttctcattttgtaatattcaattttcatcaatagaaagagtttcttagttttctctcattccttcc 41832722  T
Q  101 atggatgccatgtttcctaacat 123  Q
    |||||||||||||||||||||||    
T  41832723 atggatgccatgtttcctaacat 41832745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 8083510 - 8083389
Alignment:
Q  1 aaataacttgtaaccaccccattagagggaacttttctcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttcc 100  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||  ||||||| ||||||||| |||| |||||||||||||||||    
T  8083510 aaataacttctaaccaccccattagagggaacttttgtcattttgtaatatttcattttcatcaatagaaagagttttttagttttctctccttccttcc 8083411  T
Q  101 atggatgccatgtttcctaaca 122  Q
    ||||||||||||||||||||||    
T  8083410 atggatgccatgtttcctaaca 8083389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 25432083 - 25432205
Alignment:
Q  1 aaataacttgtaaccaccccattagagggaactttt-ctcattttgtaatattccatttatatcaatacaaagag-tttgttagatttctctccttcctt 98  Q
    ||||| ||||||||||||||||||| ||| |||||  ||||||  ||||||||| ||||  ||||||| |||||  |||| || ||||||||| ||||||    
T  25432083 aaatagcttgtaaccaccccattagtgggcactttcactcattc-gtaatattcaatttccatcaatataaagaactttgctacatttctctcattcctt 25432181  T
Q  99 ccatggatgccatgtttcctaaca 122  Q
    |||||||||||||||||| |||||    
T  25432182 ccatggatgccatgtttcataaca 25432205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 23613779 - 23613833
Alignment:
Q  42 tttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttcc 96  Q
    ||||||||||| |||||  ||||||| |||||||||||||| ||||||| |||||    
T  23613779 tttgtaatatttcatttccatcaataaaaagagtttgttagttttctctacttcc 23613833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 24939166 - 24939126
Alignment:
Q  156 aaggaatgagttttgattttattaagtaacttttattattat 197  Q
    ||||||||||||||||||| ||||||||||| ||||||||||    
T  24939166 aaggaatgagttttgattt-attaagtaactattattattat 24939126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 212
Target Start/End: Original strand, 31494831 - 31494910
Alignment:
Q  132 tattattagcaatacattttttctaaggaatgagttttgattttattaagtaacttttattattatattagtggtcaatct 212  Q
    |||||||| || ||| |||||| |||| ||| | ||||||| ||||||||||| | |||||||||||||||  ||||||||    
T  31494831 tattattatcagtactttttttttaag-aataacttttgatcttattaagtaattattattattatattagcagtcaatct 31494910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 3e-44; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 7277870 - 7277748
Alignment:
Q  1 aaataacttgtaaccaccccattagagggaacttttctcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttcc 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||| ||||||||| |||| |||||||||||| ||||    
T  7277870 aaataacttgtaaccaccccattagagggtacttttctcattttgtaatattccattttcatcaatagaaagagtttcttagttttctctccttctttcc 7277771  T
Q  101 atggatgccatgtttcctaacat 123  Q
    |||||| ||||||||||||||||    
T  7277770 atggataccatgtttcctaacat 7277748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 7275265 - 7275143
Alignment:
Q  1 aaataacttgtaaccaccccattagagggaacttttctcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttcc 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||| ||||||||| |||| |||||||||||| || |    
T  7275265 aaataacttgtaaccaccccattagagggtacttttctcattttgtaatattccattttcatcaatagaaagagtttcttagttttctctccttcttttc 7275166  T
Q  101 atggatgccatgtttcctaacat 123  Q
    |||||| ||||||||||||||||    
T  7275165 atggataccatgtttcctaacat 7275143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 3567612 - 3567495
Alignment:
Q  1 aaataacttgtaaccaccccattagaggga-actttt---ctcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttcc 96  Q
    ||||||| ||||||||||| |||||||||| ||||||   ||||||| ||||||||||||||  |||||||||||||||||||||||||||| |||||||    
T  3567612 aaataacctgtaaccaccctattagagggatactttttcactcattt-gtaatattccattttcatcaatacaaagagtttgttagatttctttccttcc 3567514  T
Q  97 ttccatggatgccatgttt 115  Q
    ||||| ||||| |||||||    
T  3567513 ttccacggatgtcatgttt 3567495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 13856687 - 13856810
Alignment:
Q  1 aaataacttgtaaccaccccattagaggg-aacttt-tctcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttcctt 98  Q
    |||||||||||||||||||||||||||||  |||||  |||| |||||| |||||||||| ||||||||||||| ||| ||||| |||||||||||| ||    
T  13856687 aaataacttgtaaccaccccattagagggttactttcactca-tttgtagtattccatttctatcaatacaaagtgttcgttagttttctctccttcttt 13856785  T
Q  99 ccatggatgccatgtttcctaacat 123  Q
    ||||||||| |||||||| ||||||    
T  13856786 ccatggatgtcatgtttcataacat 13856810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 124
Target Start/End: Original strand, 12464815 - 12464846
Alignment:
Q  93 ttccttccatggatgccatgtttcctaacata 124  Q
    ||||||||||||||||||||||||||||||||    
T  12464815 ttccttccatggatgccatgtttcctaacata 12464846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 5690859 - 5690896
Alignment:
Q  85 ttctctccttccttccatggatgccatgtttcctaaca 122  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  5690859 ttctctcattccttccatggatgccatgtttcataaca 5690896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 3e-44; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 18705829 - 18705707
Alignment:
Q  1 aaataacttgtaaccaccccattagagggaacttttctcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||| ||||||||| |||| ||||||||||||||| |    
T  18705829 aaataacttgtaaccaccccattagagggaacttttctcattttgtaatattctattttcatcaatagaaagagtttcttagttttctctccttcctttc 18705730  T
Q  101 atggatgccatgtttcctaacat 123  Q
    ||||||||||||||| |||||||    
T  18705729 atggatgccatgttttctaacat 18705707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 49459636 - 49459558
Alignment:
Q  120 acatatttattctattattagcaatacattttttctaaggaatgagttttgattttattaagtaacttttattattatat 199  Q
    |||| ||||||||||||||| |||||| |||||| |||||||||||||||| |||||||| |||| | ||||||||||||    
T  49459636 acatgtttattctattattatcaatacgttttttttaaggaatgagttttg-ttttattaggtaattattattattatat 49459558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 2427331 - 2427369
Alignment:
Q  84 tttctctccttccttccatggatgccatgtttcctaaca 122  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  2427331 tttctctcattccttccatggatgccatgtttcctaaca 2427369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 9191775 - 9191821
Alignment:
Q  166 ttttgattttattaagtaacttttattattatattagtggtcaatct 212  Q
    ||||||||||||||||||| | |||||||||||||||| ||||||||    
T  9191775 ttttgattttattaagtaattattattattatattagtagtcaatct 9191821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 122
Target Start/End: Complemental strand, 782954 - 782838
Alignment:
Q  8 ttgtaaccaccccattagaggga-actttt--ctcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttccatgg 104  Q
    ||||||||||||||| || |||| ||||||  ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  782954 ttgtaaccaccccataagtgggacactttttactcattt-gtaatattccatttctatcaatacaaagagtttgttagatttctctccttccttccatgg 782856  T
Q  105 atgccatgtttcctaaca 122  Q
    ||| ||||||||||||||    
T  782855 atgtcatgtttcctaaca 782838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 10018857 - 10018777
Alignment:
Q  42 tttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttccatggatgccatgtttcctaaca 122  Q
    ||||||||||| |||||  |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  10018857 tttgtaatatttcatttccatcaatacaaagagtttgttagttttctctccttctttccatggatgccatgtttcctaaca 10018777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 123
Target Start/End: Complemental strand, 19954531 - 19954450
Alignment:
Q  42 tttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttccatggatgccatgtttcctaacat 123  Q
    |||||| ||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||    
T  19954531 tttgtattattccatttccatcaatacaaagagattgttagatttctctccttccttccatggatgtcatgtttcataacat 19954450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 10123397 - 10123317
Alignment:
Q  42 tttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttccatggatgccatgtttcctaaca 122  Q
    ||||||||||| |||||  |||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||    
T  10123397 tttgtaatatttcatttccatcaatacaaagagtttgttagttttctctccttcttttcatggatgccatgtttcctaaca 10123317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 10256171 - 10256091
Alignment:
Q  42 tttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttccatggatgccatgtttcctaaca 122  Q
    ||||||||||| |||||  ||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  10256171 tttgtaatatttcatttccatcaatacaaaaagtttgttagttttctctccttctttccatggatgccatgtttcctaaca 10256091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 10180054 - 10179974
Alignment:
Q  42 tttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttccatggatgccatgtttcctaaca 122  Q
    ||||||||||| |||||  |||||||||||||||||||||| |||||||||||| || |||||||| ||||||||||||||    
T  10180054 tttgtaatatttcatttccatcaatacaaagagtttgttagttttctctccttcttttcatggatgtcatgtttcctaaca 10179974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 10514429 - 10514351
Alignment:
Q  44 tgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttccatggatgccatgtttcctaaca 122  Q
    ||||||||||||||| |   |||||||||||||| |||| |||||||||||| |||||||||||||||| |||||||||    
T  10514429 tgtaatattccatttttcataatacaaagagtttattagttttctctccttctttccatggatgccatgattcctaaca 10514351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 8 - 122
Target Start/End: Complemental strand, 10661871 - 10661756
Alignment:
Q  8 ttgtaaccaccccattagaggga-actttt-ctcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttccatgga 105  Q
    |||||||||||||||||| |||| |||||  ||||||| ||||||||||||||     | ||||||||||||||||| |||||||| ||| |||||||||    
T  10661871 ttgtaaccaccccattagtgggatactttcactcattt-gtaatattccattttccatactacaaagagtttgttagttttctctcattctttccatgga 10661773  T
Q  106 tgccatgtttcctaaca 122  Q
    || ||||||||||||||    
T  10661772 tgtcatgtttcctaaca 10661756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 122
Target Start/End: Complemental strand, 10511141 - 10511027
Alignment:
Q  8 ttgtaaccaccccattagaggga-acttttc-tcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttccatgga 105  Q
    |||||||||||||||||| |||| ||||| | |||||| ||||||||||||||     ||||||||||||||||||| |||||||| ||| |||||| ||    
T  10511141 ttgtaaccaccccattagtgggatactttccctcattt-gtaatattccattttccataatacaaagagtttgttagttttctctcattctttccataga 10511043  T
Q  106 tgccatgtttcctaaca 122  Q
    || ||||||||||||||    
T  10511042 tg-catgtttcctaaca 10511027  T

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Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 122
Target Start/End: Complemental strand, 10613426 - 10613346
Alignment:
Q  42 tttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttccatggatgccatgtttcctaaca 122  Q
    |||||||||||||||||     ||||||||||||||||||| |||||||| ||| ||| ||||||| |||| |||| ||||    
T  10613426 tttgtaatattccattttgcataatacaaagagtttgttagttttctctcattctttctatggatgtcatgattcccaaca 10613346  T

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Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 17743104 - 17743141
Alignment:
Q  85 ttctctccttccttccatggatgccatgtttcctaaca 122  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  17743104 ttctctcattcctttcatggatgccatgtttcctaaca 17743141  T

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Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 122
Target Start/End: Original strand, 19044424 - 19044461
Alignment:
Q  85 ttctctccttccttccatggatgccatgtttcctaaca 122  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  19044424 ttctctcattcctttcatggatgccatgtttcctaaca 19044461  T

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Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 123
Target Start/End: Original strand, 548457 - 548497
Alignment:
Q  83 atttctctccttccttccatggatgccatgtttcctaacat 123  Q
    ||||||||| |||||||||||||||||| |||| |||||||    
T  548457 atttctctcattccttccatggatgccaagttttctaacat 548497  T

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Target: scaffold0001 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 33 - 122
Target Start/End: Complemental strand, 144750 - 144661
Alignment:
Q  33 ttttctcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttccatggatgccatgtttcctaaca 122  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  144750 ttttctcattttgtaatattccatttctatcaatataaagagtttgttagatttatctccttccttccatagatgccatgtttcctaaca 144661  T

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Target: scaffold0001; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 146809 - 146719
Alignment:
Q  33 ttttctcattttgtaatattccatttatatcaatacaaagagtttgttagatttctctccttccttccatggatgccatgtttcctaacat 123  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||| || ||||||||||||||||||||    
T  146809 ttttctcattttgtaatattccatttctatcaatataaagagtttgttagatttatctccttccttctatagatgccatgtttcctaacat 146719  T

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Target: scaffold0251 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 4632 - 4719
Alignment:
Q  1 aaataacttgtaaccaccccattagagggaacttttctcattttgtaatattccatttatatcaatacaaagagtttgttagatttct 88  Q
    |||||| |||||||||||| ||||||||||||||||  |||||||||||||| |||||  ||||||| ||||||||| |||| |||||    
T  4632 aaataatttgtaaccaccctattagagggaactttttccattttgtaatatttcattttcatcaatagaaagagtttcttagttttct 4719  T

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Target: scaffold0959 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0959
Description:

Target: scaffold0959; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 67 - 122
Target Start/End: Complemental strand, 463 - 408
Alignment:
Q  67 acaaagagtttgttagatttctctccttccttccatggatgccatgtttcctaaca 122  Q
    |||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  463 acaacgagtttgttagatttctctcattccttccatggatgccttgtttcctaaca 408  T

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Target: scaffold0655 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 661 - 782
Alignment:
Q  1 aaataacttgtaaccaccccattagaggga-acttttctcattttgtaatattccatttatatcaatacaaagag-tttgttagatttctctccttcctt 98  Q
    |||||||||||| ||||||||||||||||  ||||  |||||||| |||||||| ||||  |||||||||||||| |||  ||  |||||||| ||||||    
T  661 aaataacttgtatccaccccattagagggtgacttcactcatttt-taatattcaatttccatcaatacaaagagctttactacttttctctcattcctt 759  T
Q  99 ccatggatgccatgtttcctaac 121  Q
    | | |||||||||||||||||||    
T  760 cgacggatgccatgtttcctaac 782  T

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